17-03-18 03:13:25.424 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:13:25.424 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-18 03:13:25.424 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8311 mm, delta = 0.5495 mm
17-03-18 03:13:25.424 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:25.424 -07 000000569 INF: FPGA: Recv YRDPOS 153255
17-03-18 03:13:25.434 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:13:25.434 -07 000000610 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:25.434 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-18 03:13:25.434 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-18 03:13:25.434 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-18 03:13:25.554 -07 000000461 INF: FPGA: Recv YMVTO 154378 878
17-03-18 03:13:25.554 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 113 ms to get response, and 116 ms overall
17-03-18 03:13:25.554 -07 000000610 INF: Y Motor: Position error before settling = -1 encoder counts (0.000 mm)
17-03-18 03:13:25.554 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.550 mm) should take 878 steps, but required 878 steps (0.549 mm). Slippage = 0.000 mm (0.00%).
17-03-18 03:13:25.554 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 117 ms, distance = 0.550 mm, average velocity = 4.697 mm/sec
17-03-18 03:13:26.554 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:13:26.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:13:28.554 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:28.554 -07 000000424 INF: FPGA: Recv YRDPOS 154386
17-03-18 03:13:28.564 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:28.564 -07 000000610 INF: Y Motor: Encoder = 154386 = motor step 120614.1 = 75.3838 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:28.584 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.003209, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:13:28.584 -07 000000610 INF: Y Motor: Position error after settling = 7 encoder counts (0.003 mm), Delta during settling = 8 counts (0.004 mm)
17-03-18 03:13:28.584 -07 000000610 INF: Y Motor: Moved to 75.3838 after 3157 ms
17-03-18 03:13:28.584 -07 000000610 INF: =================== Cycle #110, Flow Cell Temp 60° ===================
17-03-18 03:13:28.584 -07 000000610 INF: =================== Cycle #110, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-18 03:13:28.584 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-18 03:13:28.594 -07 000000501 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:13:28.604 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:13:28.604 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:13:28.604 -07 000000512 INF: FPGA: Recv TEC2EN 
17-03-18 03:13:28.614 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:28.614 -07 000000610 INF: =================== Cycle #110, Flow Cell Temp 60° ===================
17-03-18 03:13:28.614 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:13:28.614 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:13:28.614 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:13:28.644 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:13:28.644 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-18 03:13:28.644 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:13:28.944 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:13:28.964 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:13:28.964 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:13:29.004 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.008536,
17-03-18 03:13:29.014 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:13:29.034 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:13:29.034 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:13:29.134 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:13:29.134 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:13:29.134 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:13:29.164 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:13:29.164 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:13:29.164 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:13:29.294 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:13:29.334 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:13:31.554 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-18 03:13:31.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1602, R2=1669, Total=3271. Warn if over 250 bubbles per interval.
17-03-18 03:13:32.464 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:32.494 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:13:32.914 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:32.944 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:13:33.364 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:33.394 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:13:33.394 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:13:33.394 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:13:33.524 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:13:33.554 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:13:33.554 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:13:33.684 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:13:33.714 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:13:33.714 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:13:33.714 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:13:33.844 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:13:33.874 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:13:34.304 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:34.334 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:13:34.334 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:13:34.334 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:13:34.364 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.989471,
17-03-18 03:13:35.554 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:13:35.554 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-18 03:13:35.554 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:13:35.574 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:13:35.574 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-18 03:13:35.574 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-18 03:13:35.704 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:13:35.724 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-18 03:13:35.724 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-18 03:13:35.774 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:13:35.794 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:13:35.794 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:13:35.894 -07 000000610 INF: =================== Cycle #110, Pumping Reagent CMS (4) ===================
17-03-18 03:13:35.894 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:13:35.894 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:13:35.924 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:13:35.924 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:13:35.924 -07 000000610 INF: =================== Cycle #110, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-18 03:13:36.054 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:13:36.094 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:13:36.554 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:13:36.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1602, R2=1669, Total=3271. Warn if over 250 bubbles per interval.
17-03-18 03:13:37.534 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:37.564 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:13:37.984 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:38.014 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:13:38.014 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:13:38.014 -07 000000610 INF: =================== Cycle #110, Pumping Reagent CMS (4) ===================
17-03-18 03:13:38.144 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:13:38.174 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:13:38.174 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:13:38.304 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:13:38.334 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:13:38.334 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:13:38.334 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:13:38.464 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:13:38.494 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:13:38.924 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:38.954 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:13:38.954 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:13:38.954 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:13:39.724 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.999021,
17-03-18 03:13:40.174 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:13:40.174 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:13:40.174 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:13:40.194 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:13:40.194 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-18 03:13:40.194 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-18 03:13:40.344 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:13:40.364 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-18 03:13:40.364 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-18 03:13:40.414 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:13:40.434 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:13:40.434 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:13:40.534 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:13:40.534 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:13:40.534 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:13:40.564 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:13:40.564 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:13:40.564 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:13:40.694 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:13:40.734 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:13:41.554 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:13:41.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1602, R2=1669, Total=3271. Warn if over 250 bubbles per interval.
17-03-18 03:13:41.604 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:41.634 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:13:41.634 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:13:41.634 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:13:41.764 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:13:41.794 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:13:41.794 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:13:41.924 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:13:41.954 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:13:41.954 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:13:41.954 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:13:42.084 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:13:42.114 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:13:42.544 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:42.574 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:13:42.574 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:13:42.574 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:13:42.574 -07 000000424 INF: WaitCommand(10000) start
17-03-18 03:13:42.574 -07 000000618 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:13:42.574 -07 000000618 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:13:43.794 -07 000000618 INF: AsyncDelayTimer waited 1215ms
17-03-18 03:13:43.794 -07 000000618 INF: LanePump: Xmit /1?\r
17-03-18 03:13:43.824 -07 000000618 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:13:43.824 -07 000000618 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:13:43.954 -07 000000618 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:13:43.994 -07 000000618 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:13:45.084 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.007176,
17-03-18 03:13:45.524 -07 000000618 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:45.554 -07 000000618 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:13:45.974 -07 000000618 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:46.004 -07 000000618 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:13:46.004 -07 000000618 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:13:46.004 -07 000000618 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:13:46.004 -07 000000618 INF: ===================  ===================
17-03-18 03:13:46.554 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 1
17-03-18 03:13:46.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=1, R2=0, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1603, R2=1669, Total=3272. Warn if over 250 bubbles per interval.
17-03-18 03:13:50.444 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.019446,
17-03-18 03:13:51.554 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:13:51.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1603, R2=1669, Total=3272. Warn if over 250 bubbles per interval.
17-03-18 03:13:52.584 -07 000000424 INF: WaitCommand(10000) end
17-03-18 03:13:52.584 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:13:52.584 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-18 03:13:52.584 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:13:52.614 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:13:52.614 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:13:52.614 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:13:52.744 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-18 03:13:52.784 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:13:55.804 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.016692,
17-03-18 03:13:56.554 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-18 03:13:56.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1603, R2=1670, Total=3273. Warn if over 250 bubbles per interval.
17-03-18 03:13:58.914 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:58.944 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:13:59.364 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:59.394 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:13:59.814 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:13:59.844 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:14:00.264 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:00.294 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:14:00.714 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:00.744 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:00.744 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-18 03:14:00.744 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:14:00.874 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:14:00.904 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:14:00.904 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:14:01.034 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:14:01.064 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:14:01.064 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:14:01.064 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:14:01.164 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.989471,
17-03-18 03:14:01.194 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:14:01.224 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:01.554 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 2
17-03-18 03:14:01.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=2, R2=1, Total=3. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1671, Total=3276. Warn if over 250 bubbles per interval.
17-03-18 03:14:01.654 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:01.684 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:01.684 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:14:01.684 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:14:02.904 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-18 03:14:02.904 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-18 03:14:02.904 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:14:02.924 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:14:02.924 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-18 03:14:02.924 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-18 03:14:03.134 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:14:03.154 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-18 03:14:03.154 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-18 03:14:03.204 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:14:03.224 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:14:03.224 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:14:03.324 -07 000000610 INF: =================== Cycle #110, Pumping Reagent IMT (1) ===================
17-03-18 03:14:03.324 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:14:03.324 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:14:03.354 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:14:03.354 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:14:03.354 -07 000000610 INF: =================== Cycle #110, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-18 03:14:03.484 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:14:03.524 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:14:04.964 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:04.994 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:14:05.414 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:05.444 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:05.444 -07 000000610 INF: LanePump: Waited 1920 ms for pump motion to complete
17-03-18 03:14:05.444 -07 000000610 INF: =================== Cycle #110, Pumping Reagent IMT (1) ===================
17-03-18 03:14:05.574 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:14:05.604 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:14:05.604 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:14:05.734 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:14:05.764 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:14:05.764 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:14:05.764 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:14:05.894 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:14:05.924 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:06.354 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:06.384 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:06.384 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:14:06.384 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:14:06.524 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.966297,
17-03-18 03:14:06.554 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-18 03:14:06.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:14:07.604 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-18 03:14:07.604 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:14:07.604 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:14:07.624 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:14:07.624 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-18 03:14:07.624 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:14:07.854 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:14:07.874 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-18 03:14:07.874 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-18 03:14:07.924 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:14:07.944 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:14:07.944 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:14:08.044 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:14:08.044 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:14:08.044 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:14:08.074 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:14:08.074 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:14:08.074 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:14:08.204 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:14:08.244 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:14:09.114 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:09.144 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:09.144 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:14:09.144 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:14:09.274 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:14:09.304 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:14:09.304 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:14:09.434 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:14:09.464 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:14:09.464 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:14:09.464 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:14:09.594 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:14:09.624 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:10.054 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:10.084 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:10.084 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:14:10.084 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:14:10.084 -07 000000610 INF: =================== Cycle #110, Flow Cell Temp 65° ===================
17-03-18 03:14:10.084 -07 000000610 INF: =================== Cycle #110, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-18 03:14:10.084 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-18 03:14:10.084 -07 000000576 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:14:10.094 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:14:10.094 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:14:10.094 -07 000000461 INF: FPGA: Recv TEC2EN 
17-03-18 03:14:10.104 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:14:10.104 -07 000000610 INF: =================== Cycle #110, Flow Cell Temp 65° ===================
17-03-18 03:14:10.104 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:14:10.104 -07 000000610 INF: WaitCommand(30000) start
17-03-18 03:14:11.554 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:14:11.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:14:11.884 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.983999,
17-03-18 03:14:16.554 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:14:16.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:14:17.244 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.990831,
17-03-18 03:14:21.554 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:14:21.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:14:22.604 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.028963,
17-03-18 03:14:26.554 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:14:26.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:14:27.964 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.037119,
17-03-18 03:14:31.554 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:14:31.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:14:33.324 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.016692,
17-03-18 03:14:36.554 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:14:36.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:14:38.684 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.990831,
17-03-18 03:14:40.114 -07 000000610 INF: WaitCommand(30000) end
17-03-18 03:14:40.114 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:14:40.114 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-18 03:14:40.214 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:14:40.244 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:14:40.244 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:14:40.244 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:14:40.374 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-18 03:14:40.414 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:14:40.954 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:40.984 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:40.984 -07 000000610 INF: LanePump: Waited 570 ms for pump motion to complete
17-03-18 03:14:40.984 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:14:41.114 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:14:41.144 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:14:41.144 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:14:41.274 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:14:41.304 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:14:41.304 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:14:41.304 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:14:41.434 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:14:41.464 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:41.554 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:14:41.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:14:41.894 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:41.924 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:41.924 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:14:41.924 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:14:41.924 -07 000000467 INF: WaitCommand(30000) start
17-03-18 03:14:41.924 -07 000000569 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:14:41.924 -07 000000569 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:14:43.144 -07 000000569 INF: AsyncDelayTimer waited 1215ms
17-03-18 03:14:43.144 -07 000000569 INF: LanePump: Xmit /1?\r
17-03-18 03:14:43.174 -07 000000569 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:14:43.174 -07 000000569 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:14:43.304 -07 000000569 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:14:43.344 -07 000000569 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:14:44.044 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.999021,
17-03-18 03:14:45.684 -07 000000569 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:45.714 -07 000000569 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:14:46.134 -07 000000569 INF: LanePump: Xmit /1Q\r
17-03-18 03:14:46.164 -07 000000569 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:14:46.164 -07 000000569 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-18 03:14:46.164 -07 000000569 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:14:46.164 -07 000000569 INF: ===================  ===================
17-03-18 03:14:46.554 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:14:46.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:14:49.404 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.007176,
17-03-18 03:14:51.554 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:14:51.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:14:54.764 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.990831,
17-03-18 03:14:56.554 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:14:56.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:15:00.124 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.98264,
17-03-18 03:15:01.554 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:15:01.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:15:05.484 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.983999,
17-03-18 03:15:06.554 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:15:06.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:15:10.844 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.990831,
17-03-18 03:15:11.554 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:15:11.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:15:11.934 -07 000000467 INF: WaitCommand(30000) end
17-03-18 03:15:11.934 -07 000000610 INF: =================== Cycle #110, Flow Cell Temp 22° ===================
17-03-18 03:15:11.934 -07 000000610 INF: =================== Cycle #110, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-18 03:15:11.934 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-18 03:15:11.944 -07 000000467 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:15:11.944 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:15:11.944 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:15:11.944 -07 000000430 INF: FPGA: Recv TEC2EN 
17-03-18 03:15:11.954 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:11.954 -07 000000610 INF: =================== Cycle #110, Flow Cell Temp 22° ===================
17-03-18 03:15:11.954 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:15:11.954 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:15:11.954 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:15:11.954 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:15:11.994 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:15:11.994 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:15:11.994 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:15:12.124 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:15:12.164 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:15:15.294 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:15:15.324 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:15:15.744 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:15:15.774 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:15:16.194 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:15:16.204 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.993549,
17-03-18 03:15:16.224 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:15:16.224 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:15:16.224 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:15:16.354 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:15:16.384 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:15:16.384 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:15:16.514 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:15:16.544 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:15:16.544 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:15:16.544 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:15:16.554 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:15:16.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1605, R2=1672, Total=3277. Warn if over 250 bubbles per interval.
17-03-18 03:15:16.674 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:15:16.704 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:15:17.134 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:15:17.164 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:15:17.164 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:15:17.164 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:15:18.384 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:15:18.384 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-18 03:15:18.384 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:15:18.404 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:15:18.404 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-18 03:15:18.404 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-18 03:15:18.554 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:15:18.574 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:15:18.574 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:15:18.624 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:15:18.644 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:15:18.644 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:15:18.744 -07 000000610 INF: =================== Cycle #110, Pumping Reagent USM (2) ===================
17-03-18 03:15:18.744 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:15:18.744 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:15:18.774 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:15:18.774 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:15:18.774 -07 000000610 INF: =================== Cycle #110, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-18 03:15:18.904 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:15:18.944 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:15:20.384 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:15:20.414 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:15:20.834 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:15:20.864 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:15:20.864 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:15:20.864 -07 000000610 INF: =================== Cycle #110, Pumping Reagent USM (2) ===================
17-03-18 03:15:20.994 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:15:21.024 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:15:21.024 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:15:21.154 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:15:21.184 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:15:21.184 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:15:21.184 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:15:21.314 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:15:21.344 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:15:21.554 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 1
17-03-18 03:15:21.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=1, R2=0, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1672, Total=3278. Warn if over 250 bubbles per interval.
17-03-18 03:15:21.564 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.986717,
17-03-18 03:15:21.774 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:15:21.804 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:15:21.804 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:15:21.804 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:15:23.024 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:15:23.024 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:15:23.024 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:15:23.044 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:15:23.044 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-18 03:15:23.044 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:15:23.194 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:15:23.214 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:15:23.214 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:15:23.264 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:15:23.284 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:15:23.284 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:15:23.384 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:15:23.384 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:15:23.384 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:15:23.414 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:15:23.414 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:15:23.414 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:15:23.544 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:15:23.584 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:15:24.454 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:15:24.484 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:15:24.484 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:15:24.484 -07 000000610 INF: =================== Cycle #110, Pumping Reagent PR2 (3) ===================
17-03-18 03:15:24.614 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:15:24.644 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:15:24.644 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:15:24.774 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:15:24.804 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:15:24.804 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:15:24.804 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:15:24.934 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:15:24.964 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:15:25.394 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:15:25.424 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:15:25.424 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:15:25.424 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:15:25.424 -07 000000591 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:15:25.424 -07 000000501 INF: WaitCommand(10000) start
17-03-18 03:15:25.424 -07 000000591 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:15:26.554 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 0
17-03-18 03:15:26.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=2, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:15:26.644 -07 000000591 INF: AsyncDelayTimer waited 1216ms
17-03-18 03:15:26.644 -07 000000591 INF: LanePump: Xmit /1?\r
17-03-18 03:15:26.674 -07 000000591 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:15:26.674 -07 000000591 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:15:26.804 -07 000000591 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:15:26.844 -07 000000591 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:15:26.924 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.96762,
17-03-18 03:15:28.374 -07 000000591 INF: LanePump: Xmit /1Q\r
17-03-18 03:15:28.404 -07 000000591 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:15:28.824 -07 000000591 INF: LanePump: Xmit /1Q\r
17-03-18 03:15:28.854 -07 000000591 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:15:28.854 -07 000000591 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:15:28.854 -07 000000591 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:15:28.854 -07 000000591 INF: ===================  ===================
17-03-18 03:15:31.554 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:15:31.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:15:32.284 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.988112,
17-03-18 03:15:35.434 -07 000000501 INF: WaitCommand(10000) end
17-03-18 03:15:35.434 -07 000000610 INF: =================== Cycle #110, Imaging ===================
17-03-18 03:15:35.434 -07 000000610 INF: Imaging Cycle 110: ScanTilesCommand Cycle 110 time start.
17-03-18 03:15:35.434 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-18 03:15:35.434 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:15:35.464 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:15:35.464 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-18 03:15:35.464 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-18 03:15:35.764 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:15:35.784 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:15:35.784 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:15:35.834 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:15:35.854 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:15:35.854 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:15:35.854 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:15:35.854 -07 000000462 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-18 03:15:35.854 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:15:35.854 -07 000000462 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-18 03:15:35.854 -07 000000591 INF: FPGA: Recv EXLED1ON 
17-03-18 03:15:35.864 -07 000000462 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:15:35.864 -07 000000462 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-18 03:15:35.864 -07 000000576 INF: FPGA: Recv EXLED1ADCR 23167
17-03-18 03:15:35.874 -07 000000462 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:35.874 -07 000000462 INF: RedLED: Using Red data: Photodiode ADC 23167 --> 7.4 mW (old method), or 205.3 mW (new method). Difference = 197.9 mW
17-03-18 03:15:35.874 -07 000000462 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-18 03:15:35.874 -07 000000561 INF: FPGA: Recv EXLED1OFF 
17-03-18 03:15:35.884 -07 000000462 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:35.884 -07 000000462 INF: RedLED: LED was on for 19 ms
17-03-18 03:15:35.884 -07 000000462 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 25 ms.
17-03-18 03:15:35.884 -07 000000462 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-18 03:15:35.884 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:15:35.884 -07 000000462 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-18 03:15:35.884 -07 000000579 INF: FPGA: Recv EXLED2ON 
17-03-18 03:15:35.894 -07 000000462 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:15:35.894 -07 000000462 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:15:35.894 -07 000000576 INF: FPGA: Recv EXLED1ADCR 2102
17-03-18 03:15:35.904 -07 000000462 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:35.904 -07 000000462 INF: GreenLED: Using Green data: Photodiode ADC 2102 --> 0.9 mW (old method), or 182.6 mW (new method). Difference = 181.7 mW
17-03-18 03:15:35.904 -07 000000462 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-18 03:15:35.904 -07 000000444 INF: FPGA: Recv EXLED2OFF 
17-03-18 03:15:35.914 -07 000000462 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:35.914 -07 000000462 INF: GreenLED: LED was on for 19 ms
17-03-18 03:15:35.914 -07 000000462 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 29 ms.
17-03-18 03:15:35.914 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:15:35.914 -07 000000424 INF: FPGA: Recv EMCUR 
17-03-18 03:15:35.924 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:15:35.924 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-18 03:15:36.424 -07 000000430 INF: FPGA: Recv EMOUT
17-03-18 03:15:36.424 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 03:15:36.424 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-18 03:15:36.424 -07 000000591 INF: FPGA: Recv EMCUR 
17-03-18 03:15:36.434 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:15:36.434 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:15:36.434 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.3837890625, Z-Position -0.126439201970092. ------
17-03-18 03:15:36.434 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:15:36.434 -07 000000618 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17860 mm
17-03-18 03:15:36.434 -07 000000618 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:15:36.444 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:15:36.444 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:15:36.444 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:15:36.444 -07 000000629 INF: Y Motor: Moving to 59.9126 mm, started at 75.3838 mm, delta = -15.4712 mm
17-03-18 03:15:36.444 -07 000000606 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:15:36.444 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 39014, sync = True, waitForSettling = False)
17-03-18 03:15:36.444 -07 000000590 INF: Z Motor: Moving to -0.178595 mm, started at -0.126439 mm, distance = -52.16 um
17-03-18 03:15:36.454 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:36.454 -07 000000424 INF: FPGA: Recv YRDPOS 154386
17-03-18 03:15:36.464 -07 000000590 INF: FPGA: Xmit ZDACW 39014\n [Z Motor]
17-03-18 03:15:36.464 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:15:36.464 -07 000000629 INF: Y Motor: Encoder = 154386 = motor step 120614.1 = 75.3838 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:36.464 -07 000000629 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-18 03:15:36.464 -07 000000629 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:15:36.464 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:15:36.474 -07 000000590 INF: FPGA: 'ZDACW 39014' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-18 03:15:36.474 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:36.474 -07 000000444 INF: FPGA: Recv ZDACR 39014
17-03-18 03:15:36.484 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:36.484 -07 000000590 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-18 03:15:36.484 -07 000000629 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:15:36.554 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:15:36.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:15:36.644 -07 000000576 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:15:36.644 -07 000000606 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 203 ms overall
17-03-18 03:15:37.644 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.008536,
17-03-18 03:15:38.164 -07 000000591 INF: FPGA: Recv YMVTO 122703 24782
17-03-18 03:15:38.164 -07 000000629 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1705 ms overall
17-03-18 03:15:38.164 -07 000000629 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:15:38.164 -07 000000629 INF: Y Motor: To move from 75.384 to 59.913 (-15.471 mm) should take 24754 steps, but required 24782 steps (15.489 mm). Slippage = 0.018 mm (0.00%).
17-03-18 03:15:38.164 -07 000000629 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1706 ms, distance = 15.471 mm, average velocity = 9.069 mm/sec
17-03-18 03:15:41.014 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:41.014 -07 000000462 INF: FPGA: Recv YRDPOS 122696
17-03-18 03:15:41.024 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:41.024 -07 000000629 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:41.054 -07 000000629 INF: Y Motor: After move to 59.912609, error = -0.002453, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:15:41.054 -07 000000629 INF: Y Motor: Position error after settling = -5 encoder counts (-0.002 mm), Delta during settling = -7 counts (-0.003 mm)
17-03-18 03:15:41.054 -07 000000629 INF: Y Motor: Moved to 59.9102 after 4609 ms
17-03-18 03:15:41.054 -07 000000618 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178595 mm (DAC = 39014)
17-03-18 03:15:41.054 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:41.054 -07 000000576 INF: FPGA: Recv ZSGSRD 37091
17-03-18 03:15:41.064 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:15:41.064 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:41.064 -07 000000462 INF: FPGA: Recv ZSGSRD 37092
17-03-18 03:15:41.074 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:41.074 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:41.074 -07 000000444 INF: FPGA: Recv ZSGSRD 37093
17-03-18 03:15:41.084 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:41.084 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:41.084 -07 000000591 INF: FPGA: Recv ZSGSRD 37087
17-03-18 03:15:41.094 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:41.094 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:41.094 -07 000000561 INF: FPGA: Recv ZSGSRD 37088
17-03-18 03:15:41.104 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:41.104 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:41.104 -07 000000626 INF: FPGA: Recv ZSGSRD 37094
17-03-18 03:15:41.114 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:41.114 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:41.114 -07 000000455 INF: FPGA: Recv ZSGSRD 37099
17-03-18 03:15:41.124 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:41.124 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:41.124 -07 000000569 INF: FPGA: Recv ZSGSRD 37098
17-03-18 03:15:41.134 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:41.134 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:41.134 -07 000000626 INF: FPGA: Recv ZSGSRD 37086
17-03-18 03:15:41.144 -07 000000618 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:41.144 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:41.144 -07 000000467 INF: FPGA: Recv ZSGSRD 37091
17-03-18 03:15:41.154 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:41.154 -07 000000618 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:41.154 -07 000000569 INF: FPGA: Recv ZPIEZORD 33323
17-03-18 03:15:41.164 -07 000000618 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:41.164 -07 000000618 INF: Z Motor: Piezo is near 51.2 V (nominally 0 to 100 V), expect near 59.5 V, since DAC is at 5.953 V. Piezo Error = -8.3 V.
17-03-18 03:15:41.164 -07 000000618 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.6 um, Read 10 ADC samples: Avg = 37092 (-177.7 uncal um), Error = 0.9 uncal um, Median = 37092 (-177.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 37086 (-177.7 uncal um), Max = 37099 (-177.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:15:41.164 -07 000000618 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37092, posNoise = 7, negNoise = 6
17-03-18 03:15:41.164 -07 000000618 INF: Z Motor: After move to -0.178595, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:41.164 -07 000000618 INF: Z Motor: Settle wait time = 4610 ms, measure time = 108 ms (allowed 150 ms), total time = 4718 ms
17-03-18 03:15:41.164 -07 000000618 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:15:41.214 -07 000000618 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4773 ms
17-03-18 03:15:41.214 -07 000000618 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:15:41.214 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:15:41.214 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:15:41.214 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:15:41.214 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:15:41.214 -07 000000467 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:15:41.214 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:15:41.214 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:15:41.214 -07 000000467 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:15:41.244 -07 000000467 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 03:15:41.244 -07 000000467 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:15:41.244 -07 000000467 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:15:41.244 -07 000000467 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:15:41.254 -07 000000467 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 03:15:41.254 -07 000000467 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms.
17-03-18 03:15:41.264 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:15:41.304 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:15:41.554 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:15:41.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:15:41.604 -07 000000424 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:15:41.604 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:15:41.604 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:15:41.604 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 576262032, 0x0, 559484976) start.
17-03-18 03:15:41.644 -07 000000591 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:15:41.644 -07 000000501 INF: FPGA: Recv CAMSNAP
17-03-18 03:15:41.644 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 384 ms overall
17-03-18 03:15:41.734 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 576262032, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:15:41.734 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:41.734 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:15:41.734 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-18 03:15:41.844 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:15:41.844 -07 000000626 INF: Image SNR check: start
17-03-18 03:15:41.844 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:15:41.854 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:15:41.854 -07 000000579 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:15:41.854 -07 000000626 INF: Image SNR check: pass  [peak (Max-Min)=153.74]
17-03-18 03:15:41.854 -07 000000626 INF: Autofocus start
17-03-18 03:15:41.854 -07 000000626 INF: MeasureProfile start
17-03-18 03:15:41.864 -07 000000626 INF: MeasureProfile done
17-03-18 03:15:41.864 -07 000000626 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:15:41.864 -07 000000626 INF: Autofocus finished
17-03-18 03:15:42.054 -07 000000501 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:15:42.054 -07 000000579 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:15:42.054 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91015625, Z-position -0.178610228773332. ----------
17-03-18 03:15:42.054 -07 000000610 INF: Cycle	110	Tile	1	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:15:42.064 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37529, sync = True, waitForSettling = True)
17-03-18 03:15:42.064 -07 000000610 INF: Z Motor: Moving to -0.171797 mm, started at -0.178610 mm, distance = 6.81 um
17-03-18 03:15:42.064 -07 000000610 INF: FPGA: Xmit ZDACW 37529\n [Z Motor]
17-03-18 03:15:42.064 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:15:42.074 -07 000000610 INF: FPGA: 'ZDACW 37529' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:15:42.074 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:42.074 -07 000000606 INF: FPGA: Recv ZDACR 37529
17-03-18 03:15:42.084 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:42.084 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:15:42.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:42.234 -07 000000579 INF: FPGA: Recv ZSGSRD 36032
17-03-18 03:15:42.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:15:42.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:42.244 -07 000000512 INF: FPGA: Recv ZSGSRD 36035
17-03-18 03:15:42.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:42.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:42.254 -07 000000424 INF: FPGA: Recv ZSGSRD 36032
17-03-18 03:15:42.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:42.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:42.264 -07 000000591 INF: FPGA: Recv ZSGSRD 36031
17-03-18 03:15:42.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:42.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:42.274 -07 000000618 INF: FPGA: Recv ZSGSRD 36032
17-03-18 03:15:42.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:42.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:42.284 -07 000000461 INF: FPGA: Recv ZSGSRD 36033
17-03-18 03:15:42.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:42.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:42.294 -07 000000444 INF: FPGA: Recv ZSGSRD 36039
17-03-18 03:15:42.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:42.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:42.304 -07 000000502 INF: FPGA: Recv ZSGSRD 36033
17-03-18 03:15:42.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:42.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:42.314 -07 000000590 INF: FPGA: Recv ZSGSRD 36031
17-03-18 03:15:42.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:42.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:42.324 -07 000000561 INF: FPGA: Recv ZSGSRD 36032
17-03-18 03:15:42.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:42.334 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:42.334 -07 000000579 INF: FPGA: Recv ZPIEZORD 31886
17-03-18 03:15:42.344 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:15:42.344 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.727 V. Piezo Error = -9.1 V.
17-03-18 03:15:42.344 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.8 um, Read 10 ADC samples: Avg = 36033 (-170.9 uncal um), Error = 0.9 uncal um, Median = 36032 (-170.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 36031 (-170.9 uncal um), Max = 36039 (-171.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-18 03:15:42.344 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36033, posNoise = 6, negNoise = 2
17-03-18 03:15:42.344 -07 000000610 INF: Z Motor: After move to -0.171797, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:42.344 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:15:42.344 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:15:42.344 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:15:42.344 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:15:42.344 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:15:42.344 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:15:42.344 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:15:42.344 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:15:42.344 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:15:42.344 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:15:42.344 -07 000000561 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:15:42.344 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:15:42.344 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:15:42.354 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:15:42.354 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:15:42.364 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:15:42.364 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:15:42.374 -07 000000561 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 22 ms.
17-03-18 03:15:42.374 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:15:42.374 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:15:42.374 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:15:42.394 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:15:42.394 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 50 ms.
17-03-18 03:15:42.394 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 37706 150\n [Camera]
17-03-18 03:15:42.594 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:15:43.004 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:15:43.004 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.007176,
17-03-18 03:15:43.004 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:15:43.004 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:15:43.004 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:15:43.004 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:15:43.004 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:15:43.004 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:15:43.004 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 595343416, 0x0, 391868352) start.
17-03-18 03:15:43.014 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:15:43.014 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:15:43.194 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37706 788
17-03-18 03:15:43.344 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:15:43.404 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 595343416, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 03:15:43.404 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:15:43.404 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:43.404 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:43.404 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 03:15:43.404 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 03:15:43.404 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:15:43.404 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:43.414 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:43.414 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-18 03:15:43.534 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:15:43.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:15:43.534 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:15:43.654 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:15:43.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:15:43.654 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:15:43.654 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:15:43.654 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:15:43.654 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:15:43.654 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:15:43.724 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:15:43.724 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:15:43.724 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 37706 150' command took 2 ms to send, 1319 ms to get response, and 1331 ms overall
17-03-18 03:15:43.734 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.172118
17-03-18 03:15:43.734 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17212 mm
17-03-18 03:15:43.734 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:15:43.734 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:15:43.734 -07 000000467 INF: Y Motor: Moving to 60.7426 mm, started at 59.9102 mm, delta = 0.8325 mm
17-03-18 03:15:43.734 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:43.734 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 37599, sync = True, waitForSettling = False)
17-03-18 03:15:43.734 -07 000000626 INF: Z Motor: Moving to -0.172117 mm, started at -0.171807 mm, distance = -0.31 um
17-03-18 03:15:43.734 -07 000000606 INF: FPGA: Recv YRDPOS 122696
17-03-18 03:15:43.744 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:15:43.744 -07 000000467 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:43.744 -07 000000467 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:15:43.744 -07 000000467 INF: Y Motor: Moving 1332 steps2
17-03-18 03:15:43.744 -07 000000626 INF: FPGA: Xmit ZDACW 37599\n [Z Motor]
17-03-18 03:15:43.744 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:15:43.754 -07 000000626 INF: FPGA: 'ZDACW 37599' command took 1 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:15:43.754 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:15:43.764 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:43.764 -07 000000502 INF: FPGA: Recv ZDACR 37599
17-03-18 03:15:43.774 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 03:15:43.774 -07 000000626 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:15:44.044 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:15:44.044 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:15:44.044 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:44.044 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 03:15:44.044 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:15:44.044 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:44.054 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:44.054 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:44.054 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 514 ms.
17-03-18 03:15:44.054 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:15:44.124 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 03:15:44.124 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:15:44.164 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:44.164 -07 000000424 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:15:44.174 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:15:44.174 -07 000000467 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:44.174 -07 000000467 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 03:15:44.174 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.832 mm, average velocity = 2.145 mm/sec
17-03-18 03:15:45.124 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:45.124 -07 000000569 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:15:45.134 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:15:45.134 -07 000000467 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:45.164 -07 000000467 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:15:45.164 -07 000000467 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:15:45.164 -07 000000467 INF: Y Motor: Moved to 60.7324 after 1427 ms (table move)
17-03-18 03:15:45.164 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172117 mm (DAC = 37599)
17-03-18 03:15:45.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.164 -07 000000606 INF: FPGA: Recv ZSGSRD 36089
17-03-18 03:15:45.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:15:45.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.174 -07 000000462 INF: FPGA: Recv ZSGSRD 36083
17-03-18 03:15:45.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.184 -07 000000461 INF: FPGA: Recv ZSGSRD 36082
17-03-18 03:15:45.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.194 -07 000000626 INF: FPGA: Recv ZSGSRD 36084
17-03-18 03:15:45.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.204 -07 000000502 INF: FPGA: Recv ZSGSRD 36085
17-03-18 03:15:45.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.214 -07 000000591 INF: FPGA: Recv ZSGSRD 36084
17-03-18 03:15:45.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.224 -07 000000576 INF: FPGA: Recv ZSGSRD 36083
17-03-18 03:15:45.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.234 -07 000000444 INF: FPGA: Recv ZSGSRD 36078
17-03-18 03:15:45.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.244 -07 000000618 INF: FPGA: Recv ZSGSRD 36083
17-03-18 03:15:45.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.254 -07 000000579 INF: FPGA: Recv ZSGSRD 36085
17-03-18 03:15:45.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.264 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:45.264 -07 000000561 INF: FPGA: Recv ZPIEZORD 31981
17-03-18 03:15:45.274 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.274 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.737 V. Piezo Error = -9.1 V.
17-03-18 03:15:45.274 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.1 um, Read 10 ADC samples: Avg = 36084 (-171.3 uncal um), Error = 0.9 uncal um, Median = 36084 (-171.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36078 (-171.2 uncal um), Max = 36089 (-171.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:15:45.274 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36084, posNoise = 5, negNoise = 6
17-03-18 03:15:45.274 -07 000000610 INF: Z Motor: After move to -0.172117, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:45.274 -07 000000610 INF: Z Motor: Settle wait time = 1429 ms, measure time = 107 ms (allowed 150 ms), total time = 1536 ms
17-03-18 03:15:45.274 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:15:45.324 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1588 ms
17-03-18 03:15:45.324 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:15:45.324 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.172134622934437. ----------
17-03-18 03:15:45.324 -07 000000610 INF: Cycle	110	Tile	2	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:15:45.324 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37422, sync = True, waitForSettling = True)
17-03-18 03:15:45.324 -07 000000610 INF: Z Motor: Moving to -0.171307 mm, started at -0.172135 mm, distance = 0.83 um
17-03-18 03:15:45.324 -07 000000610 INF: FPGA: Xmit ZDACW 37422\n [Z Motor]
17-03-18 03:15:45.324 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:15:45.334 -07 000000610 INF: FPGA: 'ZDACW 37422' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:15:45.334 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:45.334 -07 000000512 INF: FPGA: Recv ZDACR 37422
17-03-18 03:15:45.344 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.344 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:15:45.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.494 -07 000000591 INF: FPGA: Recv ZSGSRD 35960
17-03-18 03:15:45.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:15:45.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.504 -07 000000502 INF: FPGA: Recv ZSGSRD 35960
17-03-18 03:15:45.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.514 -07 000000569 INF: FPGA: Recv ZSGSRD 35956
17-03-18 03:15:45.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.524 -07 000000462 INF: FPGA: Recv ZSGSRD 35956
17-03-18 03:15:45.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.534 -07 000000629 INF: FPGA: Recv ZSGSRD 35955
17-03-18 03:15:45.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.544 -07 000000430 INF: FPGA: Recv ZSGSRD 35956
17-03-18 03:15:45.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.554 -07 000000424 INF: FPGA: Recv ZSGSRD 35963
17-03-18 03:15:45.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.564 -07 000000467 INF: FPGA: Recv ZSGSRD 35958
17-03-18 03:15:45.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.574 -07 000000501 INF: FPGA: Recv ZSGSRD 35957
17-03-18 03:15:45.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:45.584 -07 000000444 INF: FPGA: Recv ZSGSRD 35957
17-03-18 03:15:45.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.594 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:45.594 -07 000000430 INF: FPGA: Recv ZPIEZORD 31808
17-03-18 03:15:45.604 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:45.604 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.710 V. Piezo Error = -9.2 V.
17-03-18 03:15:45.604 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35958 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35957 (-170.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35955 (-170.4 uncal um), Max = 35963 (-170.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:15:45.604 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35958, posNoise = 5, negNoise = 3
17-03-18 03:15:45.604 -07 000000610 INF: Z Motor: After move to -0.171307, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:45.604 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:15:45.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:15:45.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:15:45.604 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:15:45.604 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:15:45.604 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:15:45.604 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:15:45.604 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:15:45.604 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:15:45.604 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:15:45.604 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:15:45.604 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:15:45.604 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:15:45.614 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:15:45.614 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:15:45.614 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:15:45.614 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:15:45.624 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 03:15:45.624 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:15:45.624 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-18 03:15:45.624 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:15:45.624 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 37599 150\n [Camera]
17-03-18 03:15:45.824 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-18 03:15:46.224 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:15:46.224 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:15:46.234 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:15:46.234 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:15:46.234 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:15:46.234 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:15:46.234 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:15:46.234 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:15:46.234 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:15:46.234 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) start.
17-03-18 03:15:46.424 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37599 788
17-03-18 03:15:46.554 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:15:46.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:15:46.574 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:15:46.634 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:15:46.634 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:15:46.634 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:46.634 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 03:15:46.634 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:15:46.634 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:46.634 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:46.634 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:15:46.634 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:15:46.644 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-18 03:15:46.764 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:15:46.764 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:15:46.764 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:15:46.764 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:15:46.764 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:15:46.764 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:15:46.764 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:15:46.774 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:15:46.774 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:15:46.774 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 03:15:46.954 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:15:46.954 -07 000000461 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:15:46.954 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 37599 150' command took 2 ms to send, 1329 ms to get response, and 1332 ms overall
17-03-18 03:15:46.964 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.171969
17-03-18 03:15:46.964 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17197 mm
17-03-18 03:15:46.964 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:15:46.964 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:15:46.964 -07 000000561 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm
17-03-18 03:15:46.964 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:46.964 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 37567, sync = True, waitForSettling = False)
17-03-18 03:15:46.964 -07 000000467 INF: Z Motor: Moving to -0.171971 mm, started at -0.171325 mm, distance = -0.65 um
17-03-18 03:15:46.964 -07 000000430 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:15:46.974 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:15:46.974 -07 000000561 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:46.974 -07 000000561 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:15:46.974 -07 000000561 INF: Y Motor: Moving 1344 steps-21
17-03-18 03:15:46.974 -07 000000467 INF: FPGA: Xmit ZDACW 37567\n [Z Motor]
17-03-18 03:15:46.974 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:15:46.984 -07 000000467 INF: FPGA: 'ZDACW 37567' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:15:46.984 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:15:46.994 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:46.994 -07 000000606 INF: FPGA: Recv ZDACR 37567
17-03-18 03:15:47.004 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 03:15:47.004 -07 000000467 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 03:15:47.154 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 03:15:47.154 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:15:47.154 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:47.164 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:47.164 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 03:15:47.164 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:15:47.164 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:47.164 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:15:47.174 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:47.174 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:15:47.354 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:15:47.354 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:15:47.404 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:47.404 -07 000000455 INF: FPGA: Recv YRDPOS 126081
17-03-18 03:15:47.414 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:15:47.414 -07 000000561 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:47.414 -07 000000561 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:15:47.414 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.840 mm, average velocity = 2.165 mm/sec
17-03-18 03:15:48.364 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:48.364 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.020806,
17-03-18 03:15:48.364 -07 000000455 INF: FPGA: Recv YRDPOS 126081
17-03-18 03:15:48.374 -07 000000561 INF: FPGA: 'YRDPOS' command took 2 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:15:48.374 -07 000000561 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:48.404 -07 000000561 INF: Y Motor: After move to 61.572609, error = -0.009621, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:15:48.404 -07 000000561 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:15:48.404 -07 000000561 INF: Y Motor: Moved to 61.5630 after 1439 ms (table move)
17-03-18 03:15:48.404 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171971 mm (DAC = 37567)
17-03-18 03:15:48.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.414 -07 000000606 INF: FPGA: Recv ZSGSRD 36054
17-03-18 03:15:48.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:15:48.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.424 -07 000000462 INF: FPGA: Recv ZSGSRD 36064
17-03-18 03:15:48.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.434 -07 000000501 INF: FPGA: Recv ZSGSRD 36062
17-03-18 03:15:48.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.444 -07 000000424 INF: FPGA: Recv ZSGSRD 36060
17-03-18 03:15:48.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.454 -07 000000430 INF: FPGA: Recv ZSGSRD 36066
17-03-18 03:15:48.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.464 -07 000000591 INF: FPGA: Recv ZSGSRD 36061
17-03-18 03:15:48.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.474 -07 000000579 INF: FPGA: Recv ZSGSRD 36060
17-03-18 03:15:48.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.484 -07 000000569 INF: FPGA: Recv ZSGSRD 36055
17-03-18 03:15:48.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:15:48.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.494 -07 000000455 INF: FPGA: Recv ZSGSRD 36055
17-03-18 03:15:48.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.504 -07 000000561 INF: FPGA: Recv ZSGSRD 36067
17-03-18 03:15:48.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.514 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:48.514 -07 000000629 INF: FPGA: Recv ZPIEZORD 31962
17-03-18 03:15:48.524 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.524 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.732 V. Piezo Error = -9.0 V.
17-03-18 03:15:48.524 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.0 um, Read 10 ADC samples: Avg = 36060 (-171.1 uncal um), Error = 0.9 uncal um, Median = 36060 (-171.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36054 (-171.1 uncal um), Max = 36067 (-171.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:15:48.524 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36060, posNoise = 7, negNoise = 6
17-03-18 03:15:48.524 -07 000000610 INF: Z Motor: After move to -0.171971, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:48.524 -07 000000610 INF: Z Motor: Settle wait time = 1441 ms, measure time = 115 ms (allowed 150 ms), total time = 1556 ms
17-03-18 03:15:48.524 -07 000000610 INF: Z Motor: Waiting extra 35 ms after reading position to reach expected total of 150 ms
17-03-18 03:15:48.564 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1598 ms
17-03-18 03:15:48.564 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:15:48.564 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56298828125, Z-position -0.171980441843035. ----------
17-03-18 03:15:48.564 -07 000000610 INF: Cycle	110	Tile	3	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:15:48.564 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37390, sync = True, waitForSettling = True)
17-03-18 03:15:48.564 -07 000000610 INF: Z Motor: Moving to -0.171160 mm, started at -0.171980 mm, distance = 0.82 um
17-03-18 03:15:48.564 -07 000000610 INF: FPGA: Xmit ZDACW 37390\n [Z Motor]
17-03-18 03:15:48.564 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:15:48.574 -07 000000610 INF: FPGA: 'ZDACW 37390' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:15:48.574 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:48.574 -07 000000430 INF: FPGA: Recv ZDACR 37390
17-03-18 03:15:48.584 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.584 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:15:48.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.734 -07 000000424 INF: FPGA: Recv ZSGSRD 35936
17-03-18 03:15:48.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:15:48.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.744 -07 000000462 INF: FPGA: Recv ZSGSRD 35942
17-03-18 03:15:48.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.754 -07 000000629 INF: FPGA: Recv ZSGSRD 35934
17-03-18 03:15:48.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.764 -07 000000512 INF: FPGA: Recv ZSGSRD 35935
17-03-18 03:15:48.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.774 -07 000000430 INF: FPGA: Recv ZSGSRD 35932
17-03-18 03:15:48.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.784 -07 000000626 INF: FPGA: Recv ZSGSRD 35934
17-03-18 03:15:48.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.794 -07 000000461 INF: FPGA: Recv ZSGSRD 35934
17-03-18 03:15:48.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.804 -07 000000591 INF: FPGA: Recv ZSGSRD 35928
17-03-18 03:15:48.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.814 -07 000000561 INF: FPGA: Recv ZSGSRD 35938
17-03-18 03:15:48.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:48.824 -07 000000569 INF: FPGA: Recv ZSGSRD 35934
17-03-18 03:15:48.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.834 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:48.834 -07 000000455 INF: FPGA: Recv ZPIEZORD 31795
17-03-18 03:15:48.844 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:48.844 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.705 V. Piezo Error = -9.1 V.
17-03-18 03:15:48.844 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.2 um, Read 10 ADC samples: Avg = 35935 (-170.3 uncal um), Error = 0.9 uncal um, Median = 35934 (-170.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35928 (-170.3 uncal um), Max = 35942 (-170.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:15:48.844 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35935, posNoise = 7, negNoise = 7
17-03-18 03:15:48.844 -07 000000610 INF: Z Motor: After move to -0.171160, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:48.844 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:15:48.844 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:15:48.844 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:15:48.844 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:15:48.844 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:15:48.844 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:15:48.844 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:15:48.844 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:15:48.844 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:15:48.844 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:15:48.844 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:15:48.844 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:15:48.844 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:15:48.854 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:15:48.854 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:15:48.854 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:15:48.854 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:15:48.864 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:15:48.864 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:15:48.864 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:15:48.864 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:15:48.874 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 37567 150\n [Camera]
17-03-18 03:15:49.074 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:15:49.474 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:15:49.474 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:15:49.474 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:15:49.474 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:15:49.474 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:15:49.474 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:15:49.474 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:15:49.474 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:15:49.604 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:15:49.604 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:15:49.664 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37567 788
17-03-18 03:15:49.814 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:15:49.864 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:15:49.864 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:15:49.864 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:49.864 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:49.864 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:15:49.974 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 367 ms.
17-03-18 03:15:49.974 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms.
17-03-18 03:15:49.974 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:49.974 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:49.984 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 505 ms.
17-03-18 03:15:50.014 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:15:50.014 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:15:50.014 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:15:50.014 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:15:50.014 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:15:50.014 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:15:50.014 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:15:50.014 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:15:50.014 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:15:50.014 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) start.
17-03-18 03:15:50.204 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:15:50.204 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:15:50.204 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 37567 150' command took 2 ms to send, 1322 ms to get response, and 1331 ms overall
17-03-18 03:15:50.204 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.171487
17-03-18 03:15:50.204 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17149 mm
17-03-18 03:15:50.204 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:15:50.204 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:15:50.204 -07 000000430 INF: Y Motor: Moving to 62.4026 mm, started at 61.5630 mm, delta = 0.8396 mm
17-03-18 03:15:50.204 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:50.204 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 37461, sync = True, waitForSettling = False)
17-03-18 03:15:50.204 -07 000000626 INF: Z Motor: Moving to -0.171485 mm, started at -0.171177 mm, distance = -0.31 um
17-03-18 03:15:50.204 -07 000000462 INF: FPGA: Recv YRDPOS 126081
17-03-18 03:15:50.214 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:15:50.214 -07 000000430 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:50.214 -07 000000430 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:15:50.214 -07 000000430 INF: Y Motor: Moving 1343 steps-20
17-03-18 03:15:50.214 -07 000000626 INF: FPGA: Xmit ZDACW 37461\n [Z Motor]
17-03-18 03:15:50.214 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:15:50.224 -07 000000626 INF: FPGA: 'ZDACW 37461' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:15:50.224 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:50.224 -07 000000576 INF: FPGA: Recv ZDACR 37461
17-03-18 03:15:50.234 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:15:50.234 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:50.234 -07 000000626 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 03:15:50.394 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:15:50.394 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:15:50.394 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:50.394 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:15:50.394 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:15:50.394 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:50.394 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:15:50.394 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:15:50.394 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:15:50.404 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:15:50.604 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 03:15:50.604 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall
17-03-18 03:15:50.654 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:50.654 -07 000000462 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:15:50.664 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:15:50.664 -07 000000430 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:50.664 -07 000000430 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 03:15:50.664 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.110 mm/sec
17-03-18 03:15:51.554 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:15:51.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:15:51.614 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:51.614 -07 000000618 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:15:51.624 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:15:51.624 -07 000000430 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:51.644 -07 000000430 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:15:51.644 -07 000000430 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:15:51.644 -07 000000430 INF: Y Motor: Moved to 62.3950 after 1442 ms (table move)
17-03-18 03:15:51.654 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171485 mm (DAC = 37461)
17-03-18 03:15:51.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.654 -07 000000561 INF: FPGA: Recv ZSGSRD 35985
17-03-18 03:15:51.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:15:51.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.664 -07 000000618 INF: FPGA: Recv ZSGSRD 35985
17-03-18 03:15:51.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.674 -07 000000444 INF: FPGA: Recv ZSGSRD 35987
17-03-18 03:15:51.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.684 -07 000000512 INF: FPGA: Recv ZSGSRD 35983
17-03-18 03:15:51.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.694 -07 000000591 INF: FPGA: Recv ZSGSRD 35986
17-03-18 03:15:51.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.704 -07 000000462 INF: FPGA: Recv ZSGSRD 35978
17-03-18 03:15:51.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.714 -07 000000579 INF: FPGA: Recv ZSGSRD 35979
17-03-18 03:15:51.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.724 -07 000000626 INF: FPGA: Recv ZSGSRD 35984
17-03-18 03:15:51.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.734 -07 000000424 INF: FPGA: Recv ZSGSRD 35986
17-03-18 03:15:51.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.744 -07 000000430 INF: FPGA: Recv ZSGSRD 35990
17-03-18 03:15:51.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.754 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:51.754 -07 000000561 INF: FPGA: Recv ZPIEZORD 31861
17-03-18 03:15:51.764 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.764 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.716 V. Piezo Error = -9.1 V.
17-03-18 03:15:51.764 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.5 um, Read 10 ADC samples: Avg = 35984 (-170.6 uncal um), Error = 0.9 uncal um, Median = 35985 (-170.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35978 (-170.6 uncal um), Max = 35990 (-170.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:15:51.764 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35984, posNoise = 6, negNoise = 6
17-03-18 03:15:51.764 -07 000000610 INF: Z Motor: After move to -0.171485, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:51.764 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 110 ms (allowed 150 ms), total time = 1553 ms
17-03-18 03:15:51.764 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:15:51.804 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1595 ms
17-03-18 03:15:51.804 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:15:51.804 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.171492201720261. ----------
17-03-18 03:15:51.804 -07 000000610 INF: Cycle	110	Tile	4	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:15:51.804 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37285, sync = True, waitForSettling = True)
17-03-18 03:15:51.804 -07 000000610 INF: Z Motor: Moving to -0.170680 mm, started at -0.171492 mm, distance = 0.81 um
17-03-18 03:15:51.804 -07 000000610 INF: FPGA: Xmit ZDACW 37285\n [Z Motor]
17-03-18 03:15:51.804 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:15:51.814 -07 000000610 INF: FPGA: 'ZDACW 37285' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:15:51.814 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:51.814 -07 000000444 INF: FPGA: Recv ZDACR 37285
17-03-18 03:15:51.824 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.824 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:15:51.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.974 -07 000000512 INF: FPGA: Recv ZSGSRD 35861
17-03-18 03:15:51.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:15:51.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.984 -07 000000430 INF: FPGA: Recv ZSGSRD 35863
17-03-18 03:15:51.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:51.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:51.994 -07 000000576 INF: FPGA: Recv ZSGSRD 35863
17-03-18 03:15:52.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:52.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:52.004 -07 000000618 INF: FPGA: Recv ZSGSRD 35856
17-03-18 03:15:52.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:52.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:52.014 -07 000000626 INF: FPGA: Recv ZSGSRD 35857
17-03-18 03:15:52.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:52.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:52.024 -07 000000462 INF: FPGA: Recv ZSGSRD 35863
17-03-18 03:15:52.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:52.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:52.034 -07 000000461 INF: FPGA: Recv ZSGSRD 35852
17-03-18 03:15:52.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:52.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:52.044 -07 000000569 INF: FPGA: Recv ZSGSRD 35861
17-03-18 03:15:52.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:52.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:52.054 -07 000000618 INF: FPGA: Recv ZSGSRD 35861
17-03-18 03:15:52.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:52.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:52.064 -07 000000606 INF: FPGA: Recv ZSGSRD 35860
17-03-18 03:15:52.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:52.074 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:52.074 -07 000000462 INF: FPGA: Recv ZPIEZORD 31720
17-03-18 03:15:52.084 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:52.084 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.689 V. Piezo Error = -9.1 V.
17-03-18 03:15:52.084 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.7 um, Read 10 ADC samples: Avg = 35860 (-169.8 uncal um), Error = 0.9 uncal um, Median = 35861 (-169.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35852 (-169.8 uncal um), Max = 35863 (-169.8 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:15:52.084 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35860, posNoise = 3, negNoise = 8
17-03-18 03:15:52.084 -07 000000610 INF: Z Motor: After move to -0.170680, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:52.084 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:15:52.084 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:15:52.084 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:15:52.084 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:15:52.084 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:15:52.084 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:15:52.084 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:15:52.084 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:15:52.084 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:15:52.084 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:15:52.084 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:15:52.084 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:15:52.084 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:15:52.094 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:15:52.094 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:15:52.094 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:15:52.094 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:15:52.104 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:15:52.104 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:15:52.104 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:15:52.104 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:15:52.104 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 37461 150\n [Camera]
17-03-18 03:15:52.314 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:15:52.714 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:15:52.714 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:15:52.714 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:15:52.714 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:15:52.714 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:15:52.724 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:15:52.724 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:15:52.724 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:15:52.724 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:15:52.724 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:15:52.904 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37461 788
17-03-18 03:15:53.054 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:15:53.104 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:15:53.104 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:15:53.104 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:53.104 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:15:53.104 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:15:53.104 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:53.104 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:15:53.104 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:15:53.104 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:15:53.114 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:15:53.254 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:15:53.254 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:15:53.254 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:15:53.254 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:15:53.254 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:15:53.254 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:15:53.254 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:15:53.254 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:15:53.384 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:15:53.384 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:15:53.444 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:15:53.444 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:15:53.444 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 37461 150' command took 2 ms to send, 1325 ms to get response, and 1335 ms overall
17-03-18 03:15:53.444 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:15:53.444 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 5 at Y-position 62.39501953125, Z-Position -0.170695599414683. ------
17-03-18 03:15:53.454 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:15:53.454 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17716 mm
17-03-18 03:15:53.454 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:15:53.454 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:15:53.454 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 38702, sync = True, waitForSettling = False)
17-03-18 03:15:53.454 -07 000000576 INF: Z Motor: Moving to -0.177166 mm, started at -0.170696 mm, distance = -6.47 um
17-03-18 03:15:53.454 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:15:53.454 -07 000000467 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm
17-03-18 03:15:53.464 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:53.464 -07 000000576 INF: FPGA: Xmit ZDACW 38702\n [Z Motor]
17-03-18 03:15:53.464 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:15:53.474 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:53.474 -07 000000576 INF: FPGA: 'ZDACW 38702' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:15:53.474 -07 000000461 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:15:53.484 -07 000000579 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:15:53.484 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:15:53.484 -07 000000467 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:53.484 -07 000000467 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:15:53.484 -07 000000467 INF: Y Motor: Moving 1340 steps-16
17-03-18 03:15:53.494 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:53.494 -07 000000590 INF: FPGA: Recv ZDACR 38702
17-03-18 03:15:53.504 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:15:53.504 -07 000000576 INF: Z Motor: MoveAbsStepped took 46 ms (did NOT wait for settling yet))
17-03-18 03:15:53.504 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:15:53.634 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:15:53.634 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:15:53.634 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:53.644 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:53.644 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:15:53.684 -07 000000455 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:15:53.684 -07 000000579 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:15:53.734 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.018051,
17-03-18 03:15:53.754 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:15:53.754 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:15:53.754 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:53.764 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:53.764 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 510 ms.
17-03-18 03:15:53.874 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:15:53.874 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-18 03:15:53.924 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:53.924 -07 000000626 INF: FPGA: Recv YRDPOS 129481
17-03-18 03:15:53.934 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:15:53.934 -07 000000467 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:53.934 -07 000000467 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:15:53.934 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.110 mm/sec
17-03-18 03:15:54.884 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:54.884 -07 000000629 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:15:54.894 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:15:54.894 -07 000000467 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:54.914 -07 000000467 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:15:54.914 -07 000000467 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:15:54.914 -07 000000467 INF: Y Motor: Moved to 63.2236 after 1464 ms (table move)
17-03-18 03:15:54.924 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177166 mm (DAC = 38702)
17-03-18 03:15:54.924 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:54.924 -07 000000444 INF: FPGA: Recv ZSGSRD 36866
17-03-18 03:15:54.934 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:15:54.934 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:54.934 -07 000000561 INF: FPGA: Recv ZSGSRD 36867
17-03-18 03:15:54.944 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:54.944 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:54.944 -07 000000569 INF: FPGA: Recv ZSGSRD 36871
17-03-18 03:15:54.954 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:54.954 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:54.954 -07 000000576 INF: FPGA: Recv ZSGSRD 36870
17-03-18 03:15:54.964 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:54.964 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:54.964 -07 000000590 INF: FPGA: Recv ZSGSRD 36873
17-03-18 03:15:54.974 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:54.974 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:54.974 -07 000000512 INF: FPGA: Recv ZSGSRD 36874
17-03-18 03:15:54.984 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:54.984 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:54.984 -07 000000561 INF: FPGA: Recv ZSGSRD 36869
17-03-18 03:15:54.994 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:54.994 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:54.994 -07 000000591 INF: FPGA: Recv ZSGSRD 36861
17-03-18 03:15:55.004 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:55.004 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:55.004 -07 000000576 INF: FPGA: Recv ZSGSRD 36869
17-03-18 03:15:55.014 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:55.014 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:55.014 -07 000000467 INF: FPGA: Recv ZSGSRD 36871
17-03-18 03:15:55.024 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:55.024 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:55.024 -07 000000455 INF: FPGA: Recv ZPIEZORD 33061
17-03-18 03:15:55.034 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:55.034 -07 000000502 INF: Z Motor: Piezo is near 50.6 V (nominally 0 to 100 V), expect near 59.1 V, since DAC is at 5.906 V. Piezo Error = -8.4 V.
17-03-18 03:15:55.034 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.2 um, Read 10 ADC samples: Avg = 36869 (-176.3 uncal um), Error = 0.9 uncal um, Median = 36870 (-176.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36861 (-176.2 uncal um), Max = 36874 (-176.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:15:55.034 -07 000000502 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36869, posNoise = 5, negNoise = 8
17-03-18 03:15:55.034 -07 000000502 INF: Z Motor: After move to -0.177166, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:55.034 -07 000000502 INF: Z Motor: Settle wait time = 1468 ms, measure time = 109 ms (allowed 150 ms), total time = 1577 ms
17-03-18 03:15:55.034 -07 000000502 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:15:55.084 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1629 ms
17-03-18 03:15:55.084 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:15:55.084 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:15:55.084 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:15:55.084 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:15:55.084 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:15:55.084 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:15:55.084 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:15:55.084 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:15:55.084 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:15:55.094 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:15:55.094 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:15:55.104 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:15:55.104 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 03:15:55.104 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:15:55.154 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:15:55.454 -07 000000461 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:15:55.454 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:15:55.454 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:15:55.454 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 575712736, 0x0, 559484976) start.
17-03-18 03:15:55.494 -07 000000444 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:15:55.494 -07 000000591 INF: FPGA: Recv CAMSNAP
17-03-18 03:15:55.494 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 384 ms overall
17-03-18 03:15:55.584 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 575712736, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:15:55.584 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:55.584 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:15:55.584 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:15:55.594 -07 000000430 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:15:55.594 -07 000000467 INF: Autofocus start
17-03-18 03:15:55.594 -07 000000467 INF: MeasureProfile start
17-03-18 03:15:55.594 -07 000000576 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:15:55.604 -07 000000430 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:15:55.604 -07 000000430 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:15:55.604 -07 000000467 INF: MeasureProfile done
17-03-18 03:15:55.604 -07 000000467 INF: X=32  Z correction [um]=0.09220707
17-03-18 03:15:55.604 -07 000000467 INF: Autofocus finished
17-03-18 03:15:55.804 -07 000000569 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:15:55.804 -07 000000430 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:15:55.804 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.17717762946572. ----------
17-03-18 03:15:55.804 -07 000000610 INF: Cycle	110	Tile	5	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:15:55.814 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37234, sync = True, waitForSettling = True)
17-03-18 03:15:55.814 -07 000000610 INF: Z Motor: Moving to -0.170446 mm, started at -0.177178 mm, distance = 6.73 um
17-03-18 03:15:55.814 -07 000000610 INF: FPGA: Xmit ZDACW 37234\n [Z Motor]
17-03-18 03:15:55.814 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:15:55.824 -07 000000610 INF: FPGA: 'ZDACW 37234' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:55.824 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:55.824 -07 000000576 INF: FPGA: Recv ZDACR 37234
17-03-18 03:15:55.834 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:55.834 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:15:55.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:55.984 -07 000000462 INF: FPGA: Recv ZSGSRD 35824
17-03-18 03:15:55.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:15:55.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:55.994 -07 000000501 INF: FPGA: Recv ZSGSRD 35819
17-03-18 03:15:56.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:56.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:56.004 -07 000000629 INF: FPGA: Recv ZSGSRD 35820
17-03-18 03:15:56.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:56.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:56.014 -07 000000462 INF: FPGA: Recv ZSGSRD 35824
17-03-18 03:15:56.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:56.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:56.024 -07 000000512 INF: FPGA: Recv ZSGSRD 35824
17-03-18 03:15:56.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:56.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:56.034 -07 000000591 INF: FPGA: Recv ZSGSRD 35826
17-03-18 03:15:56.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:56.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:56.044 -07 000000501 INF: FPGA: Recv ZSGSRD 35823
17-03-18 03:15:56.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:56.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:56.054 -07 000000430 INF: FPGA: Recv ZSGSRD 35821
17-03-18 03:15:56.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:56.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:56.064 -07 000000444 INF: FPGA: Recv ZSGSRD 35822
17-03-18 03:15:56.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:56.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:56.074 -07 000000561 INF: FPGA: Recv ZSGSRD 35822
17-03-18 03:15:56.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:56.084 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:56.084 -07 000000424 INF: FPGA: Recv ZPIEZORD 31680
17-03-18 03:15:56.094 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:56.094 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.682 V. Piezo Error = -9.1 V.
17-03-18 03:15:56.094 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35822 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35822 (-169.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35819 (-169.6 uncal um), Max = 35826 (-169.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:15:56.094 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35822, posNoise = 4, negNoise = 3
17-03-18 03:15:56.094 -07 000000610 INF: Z Motor: After move to -0.170446, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:56.094 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 03:15:56.094 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:15:56.094 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:15:56.094 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:15:56.094 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:15:56.094 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:15:56.094 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:15:56.094 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:15:56.094 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:15:56.094 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:15:56.094 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:15:56.094 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:15:56.094 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:15:56.104 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:15:56.104 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:15:56.104 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:15:56.104 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:15:56.104 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:15:56.114 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:15:56.114 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 03:15:56.114 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:15:56.114 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 37411 150\n [Camera]
17-03-18 03:15:56.314 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:15:56.554 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:15:56.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:15:56.714 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:15:56.724 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:15:56.724 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:15:56.724 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:15:56.724 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:15:56.724 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:15:56.724 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:15:56.724 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:15:56.724 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:15:56.724 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) start.
17-03-18 03:15:56.914 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37411 788
17-03-18 03:15:57.054 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:15:57.104 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:15:57.104 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:15:57.104 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:57.104 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:15:57.104 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:15:57.104 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:57.114 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:15:57.114 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:15:57.114 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:57.124 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:15:57.254 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:15:57.254 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:15:57.254 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:15:57.254 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:15:57.254 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:15:57.254 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:15:57.254 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:15:57.254 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:15:57.254 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:15:57.254 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 03:15:57.444 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:15:57.444 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:15:57.444 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 37411 150' command took 2 ms to send, 1326 ms to get response, and 1333 ms overall
17-03-18 03:15:57.444 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.170922
17-03-18 03:15:57.444 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17092 mm
17-03-18 03:15:57.444 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:15:57.454 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:15:57.454 -07 000000561 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm
17-03-18 03:15:57.454 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:57.454 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 37338, sync = True, waitForSettling = False)
17-03-18 03:15:57.454 -07 000000579 INF: Z Motor: Moving to -0.170922 mm, started at -0.170451 mm, distance = -0.47 um
17-03-18 03:15:57.454 -07 000000424 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:15:57.464 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:15:57.464 -07 000000561 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:57.464 -07 000000561 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:15:57.464 -07 000000561 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:15:57.464 -07 000000579 INF: FPGA: Xmit ZDACW 37338\n [Z Motor]
17-03-18 03:15:57.464 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:15:57.474 -07 000000579 INF: FPGA: 'ZDACW 37338' command took 1 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:15:57.474 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:15:57.484 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:57.484 -07 000000455 INF: FPGA: Recv ZDACR 37338
17-03-18 03:15:57.494 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:15:57.494 -07 000000579 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:15:57.634 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:15:57.634 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:15:57.634 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:57.644 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:57.644 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:15:57.644 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:15:57.644 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:15:57.644 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:15:57.644 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:15:57.644 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:15:57.844 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:15:57.844 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:15:57.894 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:57.894 -07 000000512 INF: FPGA: Recv YRDPOS 131187
17-03-18 03:15:57.904 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:15:57.904 -07 000000561 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:57.904 -07 000000561 INF: Y Motor: Position error before settling (table move) = -13 encoder counts (-0.006 mm)
17-03-18 03:15:57.904 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.839 mm, average velocity = 2.168 mm/sec
17-03-18 03:15:58.854 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:15:58.854 -07 000000502 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:15:58.864 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:15:58.864 -07 000000561 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:15:58.884 -07 000000561 INF: Y Motor: After move to 64.062607, error = -0.005966, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:15:58.884 -07 000000561 INF: Y Motor: Position error after settling (table move) = -12 encoder counts (-0.006 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:15:58.884 -07 000000561 INF: Y Motor: Moved to 64.0566 after 1433 ms (table move)
17-03-18 03:15:58.884 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170922 mm (DAC = 37338)
17-03-18 03:15:58.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:58.894 -07 000000501 INF: FPGA: Recv ZSGSRD 35900
17-03-18 03:15:58.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:15:58.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:58.894 -07 000000512 INF: FPGA: Recv ZSGSRD 35903
17-03-18 03:15:58.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:15:58.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:58.904 -07 000000430 INF: FPGA: Recv ZSGSRD 35906
17-03-18 03:15:58.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:58.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:58.914 -07 000000569 INF: FPGA: Recv ZSGSRD 35892
17-03-18 03:15:58.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:58.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:58.924 -07 000000467 INF: FPGA: Recv ZSGSRD 35903
17-03-18 03:15:58.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:58.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:58.934 -07 000000590 INF: FPGA: Recv ZSGSRD 35903
17-03-18 03:15:58.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:58.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:58.944 -07 000000579 INF: FPGA: Recv ZSGSRD 35893
17-03-18 03:15:58.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:58.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:58.954 -07 000000430 INF: FPGA: Recv ZSGSRD 35896
17-03-18 03:15:58.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:58.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:58.964 -07 000000606 INF: FPGA: Recv ZSGSRD 35891
17-03-18 03:15:58.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:15:58.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:58.974 -07 000000455 INF: FPGA: Recv ZSGSRD 35901
17-03-18 03:15:58.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:58.984 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:58.984 -07 000000467 INF: FPGA: Recv ZPIEZORD 31737
17-03-18 03:15:58.994 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:58.994 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.697 V. Piezo Error = -9.2 V.
17-03-18 03:15:58.994 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.9 um, Read 10 ADC samples: Avg = 35899 (-170.1 uncal um), Error = 0.9 uncal um, Median = 35900 (-170.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35891 (-170.0 uncal um), Max = 35906 (-170.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:15:58.994 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35899, posNoise = 7, negNoise = 8
17-03-18 03:15:58.994 -07 000000610 INF: Z Motor: After move to -0.170922, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:58.994 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 101 ms (allowed 150 ms), total time = 1536 ms
17-03-18 03:15:58.994 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-18 03:15:59.044 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1590 ms
17-03-18 03:15:59.044 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:15:59.044 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.056640625, Z-position -0.170946143688212. ----------
17-03-18 03:15:59.044 -07 000000610 INF: Cycle	110	Tile	6	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:15:59.044 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37161, sync = True, waitForSettling = True)
17-03-18 03:15:59.044 -07 000000610 INF: Z Motor: Moving to -0.170112 mm, started at -0.170946 mm, distance = 0.83 um
17-03-18 03:15:59.044 -07 000000610 INF: FPGA: Xmit ZDACW 37161\n [Z Motor]
17-03-18 03:15:59.044 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:15:59.054 -07 000000610 INF: FPGA: 'ZDACW 37161' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:15:59.054 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:15:59.054 -07 000000424 INF: FPGA: Recv ZDACR 37161
17-03-18 03:15:59.064 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.064 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:15:59.094 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.024884,
17-03-18 03:15:59.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:59.214 -07 000000501 INF: FPGA: Recv ZSGSRD 35775
17-03-18 03:15:59.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:59.224 -07 000000561 INF: FPGA: Recv ZSGSRD 35767
17-03-18 03:15:59.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:59.234 -07 000000467 INF: FPGA: Recv ZSGSRD 35770
17-03-18 03:15:59.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:59.244 -07 000000444 INF: FPGA: Recv ZSGSRD 35774
17-03-18 03:15:59.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:59.254 -07 000000618 INF: FPGA: Recv ZSGSRD 35769
17-03-18 03:15:59.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:59.264 -07 000000576 INF: FPGA: Recv ZSGSRD 35772
17-03-18 03:15:59.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:59.274 -07 000000512 INF: FPGA: Recv ZSGSRD 35770
17-03-18 03:15:59.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:59.284 -07 000000424 INF: FPGA: Recv ZSGSRD 35770
17-03-18 03:15:59.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:59.294 -07 000000502 INF: FPGA: Recv ZSGSRD 35769
17-03-18 03:15:59.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:15:59.304 -07 000000461 INF: FPGA: Recv ZSGSRD 35771
17-03-18 03:15:59.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.314 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:15:59.314 -07 000000467 INF: FPGA: Recv ZPIEZORD 31592
17-03-18 03:15:59.324 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:15:59.324 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.670 V. Piezo Error = -9.2 V.
17-03-18 03:15:59.324 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.1 um, Read 10 ADC samples: Avg = 35771 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35770 (-169.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35767 (-169.2 uncal um), Max = 35775 (-169.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:15:59.324 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35771, posNoise = 4, negNoise = 4
17-03-18 03:15:59.324 -07 000000610 INF: Z Motor: After move to -0.170112, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:15:59.324 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:15:59.324 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:15:59.324 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:15:59.324 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:15:59.324 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:15:59.324 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:15:59.324 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:15:59.324 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:15:59.324 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:15:59.324 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:15:59.324 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:15:59.324 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:15:59.324 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:15:59.324 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:15:59.324 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:15:59.334 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:15:59.334 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:15:59.334 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:15:59.334 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:15:59.334 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:15:59.334 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:15:59.344 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 37338 150\n [Camera]
17-03-18 03:15:59.544 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:15:59.944 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:15:59.944 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:15:59.944 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:15:59.944 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:15:59.944 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:15:59.944 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:15:59.954 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:15:59.954 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) start.
17-03-18 03:15:59.954 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:15:59.954 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:16:00.134 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37338 788
17-03-18 03:16:00.284 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:00.334 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:16:00.334 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:16:00.334 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:00.334 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:16:00.334 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:16:00.334 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:00.334 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:00.334 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:00.334 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:16:00.344 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:16:00.484 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:00.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:00.484 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:00.484 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:00.484 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:00.484 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:00.484 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:00.484 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:16:00.494 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:00.494 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:16:00.674 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:16:00.674 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:00.674 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 37338 150' command took 2 ms to send, 1324 ms to get response, and 1331 ms overall
17-03-18 03:16:00.674 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.170569
17-03-18 03:16:00.674 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17057 mm
17-03-18 03:16:00.674 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:00.684 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:16:00.684 -07 000000606 INF: Y Motor: Moving to 64.8926 mm, started at 64.0566 mm, delta = 0.8360 mm
17-03-18 03:16:00.684 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:00.684 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 37261, sync = True, waitForSettling = False)
17-03-18 03:16:00.684 -07 000000629 INF: Z Motor: Moving to -0.170570 mm, started at -0.170124 mm, distance = -0.45 um
17-03-18 03:16:00.684 -07 000000569 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:16:00.694 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:00.694 -07 000000606 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:00.694 -07 000000606 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:00.694 -07 000000606 INF: Y Motor: Moving 1338 steps-13
17-03-18 03:16:00.694 -07 000000629 INF: FPGA: Xmit ZDACW 37261\n [Z Motor]
17-03-18 03:16:00.694 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:16:00.704 -07 000000629 INF: FPGA: 'ZDACW 37261' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:16:00.704 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:00.714 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:00.714 -07 000000430 INF: FPGA: Recv ZDACR 37261
17-03-18 03:16:00.724 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:16:00.724 -07 000000629 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-18 03:16:00.864 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:16:00.864 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:16:00.864 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:00.864 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:00.864 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:16:00.864 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:16:00.864 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:00.874 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:00.874 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:16:00.874 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:16:01.074 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-18 03:16:01.074 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:16:01.124 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:01.134 -07 000000424 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:16:01.134 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:16:01.134 -07 000000606 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:01.134 -07 000000606 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:16:01.134 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.836 mm, average velocity = 2.160 mm/sec
17-03-18 03:16:01.554 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:01.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:02.084 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:02.084 -07 000000576 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:16:02.094 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:02.094 -07 000000606 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:02.114 -07 000000606 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:02.114 -07 000000606 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:16:02.114 -07 000000606 INF: Y Motor: Moved to 64.8784 after 1438 ms (table move)
17-03-18 03:16:02.124 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170570 mm (DAC = 37261)
17-03-18 03:16:02.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.124 -07 000000561 INF: FPGA: Recv ZSGSRD 35836
17-03-18 03:16:02.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:16:02.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.134 -07 000000455 INF: FPGA: Recv ZSGSRD 35848
17-03-18 03:16:02.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.144 -07 000000618 INF: FPGA: Recv ZSGSRD 35843
17-03-18 03:16:02.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.154 -07 000000512 INF: FPGA: Recv ZSGSRD 35849
17-03-18 03:16:02.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.164 -07 000000424 INF: FPGA: Recv ZSGSRD 35841
17-03-18 03:16:02.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.174 -07 000000561 INF: FPGA: Recv ZSGSRD 35833
17-03-18 03:16:02.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.184 -07 000000462 INF: FPGA: Recv ZSGSRD 35846
17-03-18 03:16:02.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.194 -07 000000569 INF: FPGA: Recv ZSGSRD 35840
17-03-18 03:16:02.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.204 -07 000000629 INF: FPGA: Recv ZSGSRD 35837
17-03-18 03:16:02.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.214 -07 000000606 INF: FPGA: Recv ZSGSRD 35845
17-03-18 03:16:02.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.224 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:02.224 -07 000000430 INF: FPGA: Recv ZPIEZORD 31726
17-03-18 03:16:02.234 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.234 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.686 V. Piezo Error = -9.1 V.
17-03-18 03:16:02.234 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.6 um, Read 10 ADC samples: Avg = 35842 (-169.7 uncal um), Error = 0.9 uncal um, Median = 35842 (-169.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35833 (-169.6 uncal um), Max = 35849 (-169.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:16:02.234 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35842, posNoise = 7, negNoise = 9
17-03-18 03:16:02.234 -07 000000610 INF: Z Motor: After move to -0.170570, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:02.234 -07 000000610 INF: Z Motor: Settle wait time = 1439 ms, measure time = 111 ms (allowed 150 ms), total time = 1550 ms
17-03-18 03:16:02.234 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:02.274 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-18 03:16:02.274 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:02.274 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.170579963596131. ----------
17-03-18 03:16:02.274 -07 000000610 INF: Cycle	110	Tile	7	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:02.274 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37084, sync = True, waitForSettling = True)
17-03-18 03:16:02.274 -07 000000610 INF: Z Motor: Moving to -0.169760 mm, started at -0.170580 mm, distance = 0.82 um
17-03-18 03:16:02.274 -07 000000610 INF: FPGA: Xmit ZDACW 37084\n [Z Motor]
17-03-18 03:16:02.274 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:16:02.284 -07 000000610 INF: FPGA: 'ZDACW 37084' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:16:02.284 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:02.284 -07 000000444 INF: FPGA: Recv ZDACR 37084
17-03-18 03:16:02.294 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.294 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:02.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.444 -07 000000502 INF: FPGA: Recv ZSGSRD 35717
17-03-18 03:16:02.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:02.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.454 -07 000000561 INF: FPGA: Recv ZSGSRD 35713
17-03-18 03:16:02.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.464 -07 000000629 INF: FPGA: Recv ZSGSRD 35725
17-03-18 03:16:02.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.474 -07 000000579 INF: FPGA: Recv ZSGSRD 35713
17-03-18 03:16:02.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.484 -07 000000618 INF: FPGA: Recv ZSGSRD 35719
17-03-18 03:16:02.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.494 -07 000000461 INF: FPGA: Recv ZSGSRD 35715
17-03-18 03:16:02.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.504 -07 000000424 INF: FPGA: Recv ZSGSRD 35705
17-03-18 03:16:02.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.514 -07 000000467 INF: FPGA: Recv ZSGSRD 35719
17-03-18 03:16:02.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.524 -07 000000561 INF: FPGA: Recv ZSGSRD 35721
17-03-18 03:16:02.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:02.534 -07 000000455 INF: FPGA: Recv ZSGSRD 35718
17-03-18 03:16:02.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.544 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:02.544 -07 000000569 INF: FPGA: Recv ZPIEZORD 31527
17-03-18 03:16:02.554 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:02.554 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.659 V. Piezo Error = -9.2 V.
17-03-18 03:16:02.554 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35716 (-168.9 uncal um), Error = 0.9 uncal um, Median = 35718 (-168.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 35705 (-168.8 uncal um), Max = 35725 (-169.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 03:16:02.554 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35716, posNoise = 9, negNoise = 11
17-03-18 03:16:02.554 -07 000000610 INF: Z Motor: After move to -0.169760, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:02.554 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:16:02.554 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:02.554 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:02.554 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:02.554 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:02.554 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:02.554 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:02.554 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:02.554 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:02.554 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:02.554 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:02.554 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:02.554 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:02.564 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:16:02.564 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:02.564 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:16:02.564 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:02.574 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:16:02.574 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:16:02.574 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:16:02.574 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:16:02.584 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 37261 150\n [Camera]
17-03-18 03:16:02.784 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:03.184 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:03.184 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:03.184 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:03.184 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:03.184 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:03.184 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:03.184 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) start.
17-03-18 03:16:03.184 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:03.184 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:03.184 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:16:03.374 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37261 788
17-03-18 03:16:03.524 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:03.564 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:16:03.564 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:16:03.564 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:03.564 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:16:03.564 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:16:03.564 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:03.564 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:03.574 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:03.574 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:16:03.574 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:16:03.724 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:16:03.724 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:16:03.724 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:03.724 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:03.724 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:16:03.724 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:16:03.724 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:16:03.734 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:03.734 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:03.734 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:16:03.914 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:16:03.914 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:03.914 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 37261 150' command took 2 ms to send, 1323 ms to get response, and 1331 ms overall
17-03-18 03:16:03.914 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.170202
17-03-18 03:16:03.914 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17020 mm
17-03-18 03:16:03.914 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:03.914 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:16:03.914 -07 000000501 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm
17-03-18 03:16:03.914 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 37181, sync = True, waitForSettling = False)
17-03-18 03:16:03.914 -07 000000455 INF: Z Motor: Moving to -0.170204 mm, started at -0.169771 mm, distance = -0.43 um
17-03-18 03:16:03.924 -07 000000455 INF: FPGA: Xmit ZDACW 37181\n [Z Motor]
17-03-18 03:16:03.924 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:16:03.934 -07 000000455 INF: FPGA: 'ZDACW 37181' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:03.934 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:03.934 -07 000000561 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:16:03.944 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 03:16:03.944 -07 000000501 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:03.944 -07 000000501 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:03.944 -07 000000501 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:16:03.944 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:03.944 -07 000000512 INF: FPGA: Recv ZDACR 37181
17-03-18 03:16:03.954 -07 000000455 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:16:03.954 -07 000000455 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:16:03.954 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:04.114 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:16:04.114 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:16:04.114 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:04.114 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 391 ms.
17-03-18 03:16:04.114 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:16:04.114 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:04.124 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:16:04.124 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:16:04.124 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:16:04.134 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:16:04.334 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:16:04.334 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 375 ms to get response, and 394 ms overall
17-03-18 03:16:04.384 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:04.394 -07 000000576 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:16:04.404 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:04.404 -07 000000501 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:04.404 -07 000000501 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:16:04.404 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.844 mm, average velocity = 2.110 mm/sec
17-03-18 03:16:04.454 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.004458,
17-03-18 03:16:05.354 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:05.354 -07 000000444 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:16:05.364 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:05.364 -07 000000501 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:05.394 -07 000000501 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:05.394 -07 000000501 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:16:05.394 -07 000000501 INF: Y Motor: Moved to 65.7134 after 1476 ms (table move)
17-03-18 03:16:05.394 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170204 mm (DAC = 37181)
17-03-18 03:16:05.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.404 -07 000000606 INF: FPGA: Recv ZSGSRD 35781
17-03-18 03:16:05.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:16:05.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.404 -07 000000561 INF: FPGA: Recv ZSGSRD 35787
17-03-18 03:16:05.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:16:05.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.414 -07 000000501 INF: FPGA: Recv ZSGSRD 35781
17-03-18 03:16:05.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.424 -07 000000590 INF: FPGA: Recv ZSGSRD 35781
17-03-18 03:16:05.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.434 -07 000000618 INF: FPGA: Recv ZSGSRD 35781
17-03-18 03:16:05.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.444 -07 000000462 INF: FPGA: Recv ZSGSRD 35786
17-03-18 03:16:05.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.454 -07 000000591 INF: FPGA: Recv ZSGSRD 35788
17-03-18 03:16:05.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.464 -07 000000618 INF: FPGA: Recv ZSGSRD 35794
17-03-18 03:16:05.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.474 -07 000000606 INF: FPGA: Recv ZSGSRD 35791
17-03-18 03:16:05.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.484 -07 000000561 INF: FPGA: Recv ZSGSRD 35786
17-03-18 03:16:05.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:05.494 -07 000000462 INF: FPGA: Recv ZPIEZORD 31622
17-03-18 03:16:05.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.504 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.673 V. Piezo Error = -9.2 V.
17-03-18 03:16:05.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.2 um, Read 10 ADC samples: Avg = 35786 (-169.3 uncal um), Error = 0.9 uncal um, Median = 35786 (-169.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35781 (-169.3 uncal um), Max = 35794 (-169.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:16:05.504 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35786, posNoise = 8, negNoise = 5
17-03-18 03:16:05.504 -07 000000610 INF: Z Motor: After move to -0.170204, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:05.504 -07 000000610 INF: Z Motor: Settle wait time = 1479 ms, measure time = 101 ms (allowed 150 ms), total time = 1580 ms
17-03-18 03:16:05.504 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:05.554 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1634 ms
17-03-18 03:16:05.554 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:05.554 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.170220207716193. ----------
17-03-18 03:16:05.554 -07 000000610 INF: Cycle	110	Tile	8	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:05.554 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37004, sync = True, waitForSettling = True)
17-03-18 03:16:05.554 -07 000000610 INF: Z Motor: Moving to -0.169393 mm, started at -0.170220 mm, distance = 0.83 um
17-03-18 03:16:05.554 -07 000000610 INF: FPGA: Xmit ZDACW 37004\n [Z Motor]
17-03-18 03:16:05.554 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:16:05.564 -07 000000610 INF: FPGA: 'ZDACW 37004' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:16:05.564 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:05.564 -07 000000467 INF: FPGA: Recv ZDACR 37004
17-03-18 03:16:05.574 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.574 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:05.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.724 -07 000000461 INF: FPGA: Recv ZSGSRD 35665
17-03-18 03:16:05.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:05.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.734 -07 000000561 INF: FPGA: Recv ZSGSRD 35655
17-03-18 03:16:05.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:16:05.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.744 -07 000000618 INF: FPGA: Recv ZSGSRD 35655
17-03-18 03:16:05.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.754 -07 000000579 INF: FPGA: Recv ZSGSRD 35662
17-03-18 03:16:05.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.764 -07 000000629 INF: FPGA: Recv ZSGSRD 35655
17-03-18 03:16:05.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.774 -07 000000606 INF: FPGA: Recv ZSGSRD 35662
17-03-18 03:16:05.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.784 -07 000000591 INF: FPGA: Recv ZSGSRD 35658
17-03-18 03:16:05.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.794 -07 000000467 INF: FPGA: Recv ZSGSRD 35664
17-03-18 03:16:05.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.804 -07 000000579 INF: FPGA: Recv ZSGSRD 35661
17-03-18 03:16:05.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:05.814 -07 000000629 INF: FPGA: Recv ZSGSRD 35653
17-03-18 03:16:05.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.824 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:05.824 -07 000000430 INF: FPGA: Recv ZPIEZORD 31437
17-03-18 03:16:05.834 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:05.834 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.646 V. Piezo Error = -9.3 V.
17-03-18 03:16:05.834 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.4 um, Read 10 ADC samples: Avg = 35659 (-168.5 uncal um), Error = 0.9 uncal um, Median = 35660 (-168.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35653 (-168.5 uncal um), Max = 35665 (-168.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:16:05.834 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35659, posNoise = 6, negNoise = 6
17-03-18 03:16:05.834 -07 000000610 INF: Z Motor: After move to -0.169393, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:05.834 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:16:05.834 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:05.834 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:05.834 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:05.834 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:05.834 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:05.834 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:05.834 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:05.834 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:05.834 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:05.834 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:05.834 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:05.834 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:05.834 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:16:05.834 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:05.844 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:16:05.844 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:05.854 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 17 ms.
17-03-18 03:16:05.854 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:16:05.854 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:16:05.854 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:16:05.854 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 37181 150\n [Camera]
17-03-18 03:16:06.054 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:06.464 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:06.464 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:06.464 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:06.464 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:06.464 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:16:06.464 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:06.464 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:06.464 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:06.464 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:06.464 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:16:06.554 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:06.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:06.654 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37181 788
17-03-18 03:16:06.804 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:06.834 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:16:06.834 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:16:06.834 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:06.844 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:16:06.844 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:16:06.844 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:06.844 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:06.844 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:06.844 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:16:06.854 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:16:06.994 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:06.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:07.004 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:07.124 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:07.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:07.134 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:07.134 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:07.134 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) start.
17-03-18 03:16:07.134 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:07.134 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:16:07.194 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:16:07.194 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:07.194 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 37181 150' command took 2 ms to send, 1321 ms to get response, and 1331 ms overall
17-03-18 03:16:07.194 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:16:07.194 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 9 at Y-position 65.71337890625, Z-Position -0.169404332774189. ------
17-03-18 03:16:07.194 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.17588 mm
17-03-18 03:16:07.194 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:07.204 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:16:07.204 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:16:07.204 -07 000000629 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm
17-03-18 03:16:07.204 -07 000000467 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:16:07.204 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 38420, sync = True, waitForSettling = False)
17-03-18 03:16:07.204 -07 000000569 INF: Z Motor: Moving to -0.175875 mm, started at -0.169404 mm, distance = -6.47 um
17-03-18 03:16:07.214 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:07.214 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:07.214 -07 000000430 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:16:07.224 -07 000000569 INF: FPGA: Xmit ZDACW 38420\n [Z Motor]
17-03-18 03:16:07.224 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:16:07.224 -07 000000629 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:07.224 -07 000000629 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:07.224 -07 000000629 INF: Y Motor: Moving 1343 steps-19
17-03-18 03:16:07.224 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:16:07.234 -07 000000569 INF: FPGA: 'ZDACW 38420' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:16:07.234 -07 000000444 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:16:07.244 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:07.254 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:07.254 -07 000000430 INF: FPGA: Recv ZDACR 38420
17-03-18 03:16:07.264 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:16:07.264 -07 000000569 INF: Z Motor: MoveAbsStepped took 55 ms (did NOT wait for settling yet))
17-03-18 03:16:07.434 -07 000000606 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:16:07.434 -07 000000444 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall
17-03-18 03:16:07.514 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:16:07.514 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:16:07.514 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:07.514 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:16:07.524 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:16:07.524 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:07.524 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:07.524 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 523 ms.
17-03-18 03:16:07.524 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:07.534 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 03:16:07.614 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:16:07.614 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-18 03:16:07.664 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:07.674 -07 000000569 INF: FPGA: Recv YRDPOS 136270
17-03-18 03:16:07.674 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:16:07.674 -07 000000629 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:07.674 -07 000000629 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:16:07.674 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.839 mm, average velocity = 2.125 mm/sec
17-03-18 03:16:08.624 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:08.624 -07 000000467 INF: FPGA: Recv YRDPOS 136270
17-03-18 03:16:08.634 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:08.634 -07 000000629 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:08.664 -07 000000629 INF: Y Motor: After move to 66.552605, error = -0.014519, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:08.664 -07 000000629 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:16:08.664 -07 000000629 INF: Y Motor: Moved to 66.5381 after 1457 ms (table move)
17-03-18 03:16:08.664 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175875 mm (DAC = 38420)
17-03-18 03:16:08.664 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:08.664 -07 000000561 INF: FPGA: Recv ZSGSRD 36678
17-03-18 03:16:08.674 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:16:08.674 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:08.674 -07 000000569 INF: FPGA: Recv ZSGSRD 36668
17-03-18 03:16:08.684 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:08.684 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:08.684 -07 000000455 INF: FPGA: Recv ZSGSRD 36668
17-03-18 03:16:08.694 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:08.694 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:08.694 -07 000000461 INF: FPGA: Recv ZSGSRD 36670
17-03-18 03:16:08.704 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:08.704 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:08.704 -07 000000576 INF: FPGA: Recv ZSGSRD 36669
17-03-18 03:16:08.714 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:08.714 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:08.714 -07 000000629 INF: FPGA: Recv ZSGSRD 36666
17-03-18 03:16:08.724 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:08.724 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:08.724 -07 000000561 INF: FPGA: Recv ZSGSRD 36665
17-03-18 03:16:08.734 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:08.734 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:08.734 -07 000000569 INF: FPGA: Recv ZSGSRD 36668
17-03-18 03:16:08.744 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:08.744 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:08.744 -07 000000512 INF: FPGA: Recv ZSGSRD 36668
17-03-18 03:16:08.754 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:08.754 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:08.754 -07 000000626 INF: FPGA: Recv ZSGSRD 36670
17-03-18 03:16:08.764 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:08.764 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:08.764 -07 000000618 INF: FPGA: Recv ZPIEZORD 32805
17-03-18 03:16:08.774 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:08.774 -07 000000502 INF: Z Motor: Piezo is near 50.1 V (nominally 0 to 100 V), expect near 58.6 V, since DAC is at 5.863 V. Piezo Error = -8.5 V.
17-03-18 03:16:08.774 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.9 um, Read 10 ADC samples: Avg = 36669 (-175.0 uncal um), Error = 0.9 uncal um, Median = 36668 (-175.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36665 (-175.0 uncal um), Max = 36678 (-175.1 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:16:08.774 -07 000000502 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36669, posNoise = 9, negNoise = 4
17-03-18 03:16:08.774 -07 000000502 INF: Z Motor: After move to -0.175875, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:08.774 -07 000000502 INF: Z Motor: Settle wait time = 1459 ms, measure time = 107 ms (allowed 150 ms), total time = 1566 ms
17-03-18 03:16:08.774 -07 000000502 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:08.824 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1620 ms
17-03-18 03:16:08.824 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:08.824 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:08.824 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:08.824 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:08.824 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:08.824 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:16:08.824 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:08.824 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:16:08.824 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:16:08.834 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:16:08.834 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:16:08.844 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:16:08.844 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 03:16:08.844 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:16:08.894 -07 000000444 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:16:09.194 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:16:09.194 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:16:09.194 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:16:09.194 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) start.
17-03-18 03:16:09.234 -07 000000618 INF: FPGA: Recv @CAMSNAP 381
17-03-18 03:16:09.234 -07 000000455 INF: FPGA: Recv CAMSNAP
17-03-18 03:16:09.234 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 386 ms overall
17-03-18 03:16:09.314 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:16:09.314 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:09.324 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 03:16:09.324 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:16:09.334 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:16:09.334 -07 000000444 INF: Autofocus start
17-03-18 03:16:09.334 -07 000000444 INF: MeasureProfile start
17-03-18 03:16:09.334 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:16:09.344 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:16:09.344 -07 000000606 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:16:09.344 -07 000000444 INF: MeasureProfile done
17-03-18 03:16:09.344 -07 000000444 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:16:09.344 -07 000000444 INF: Autofocus finished
17-03-18 03:16:09.544 -07 000000591 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:16:09.544 -07 000000606 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:16:09.544 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5380859375, Z-position -0.175892787037367. ----------
17-03-18 03:16:09.544 -07 000000610 INF: Cycle	110	Tile	9	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:09.554 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36935, sync = True, waitForSettling = True)
17-03-18 03:16:09.554 -07 000000610 INF: Z Motor: Moving to -0.169078 mm, started at -0.175893 mm, distance = 6.82 um
17-03-18 03:16:09.554 -07 000000610 INF: FPGA: Xmit ZDACW 36935\n [Z Motor]
17-03-18 03:16:09.554 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:16:09.564 -07 000000610 INF: FPGA: 'ZDACW 36935' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:16:09.564 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:09.564 -07 000000590 INF: FPGA: Recv ZDACR 36935
17-03-18 03:16:09.574 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:09.574 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:09.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:09.724 -07 000000591 INF: FPGA: Recv ZSGSRD 35616
17-03-18 03:16:09.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:09.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:09.734 -07 000000462 INF: FPGA: Recv ZSGSRD 35613
17-03-18 03:16:09.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:09.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:09.744 -07 000000606 INF: FPGA: Recv ZSGSRD 35608
17-03-18 03:16:09.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:09.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:09.754 -07 000000629 INF: FPGA: Recv ZSGSRD 35609
17-03-18 03:16:09.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:09.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:09.764 -07 000000501 INF: FPGA: Recv ZSGSRD 35610
17-03-18 03:16:09.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:09.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:09.774 -07 000000430 INF: FPGA: Recv ZSGSRD 35611
17-03-18 03:16:09.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:09.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:09.784 -07 000000569 INF: FPGA: Recv ZSGSRD 35607
17-03-18 03:16:09.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:09.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:09.794 -07 000000579 INF: FPGA: Recv ZSGSRD 35610
17-03-18 03:16:09.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:09.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:09.814 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.990831,
17-03-18 03:16:09.814 -07 000000576 INF: FPGA: Recv ZSGSRD 35605
17-03-18 03:16:09.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:16:09.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:09.834 -07 000000467 INF: FPGA: Recv ZSGSRD 35609
17-03-18 03:16:09.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:16:09.844 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:09.844 -07 000000629 INF: FPGA: Recv ZPIEZORD 31405
17-03-18 03:16:09.854 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:09.854 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.636 V. Piezo Error = -9.3 V.
17-03-18 03:16:09.854 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35610 (-168.2 uncal um), Error = 0.9 uncal um, Median = 35610 (-168.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35605 (-168.2 uncal um), Max = 35616 (-168.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:16:09.854 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35610, posNoise = 6, negNoise = 5
17-03-18 03:16:09.854 -07 000000610 INF: Z Motor: After move to -0.169078, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:09.854 -07 000000610 INF: Z Motor: MoveAbsStepped took 300 ms)
17-03-18 03:16:09.854 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:09.854 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:09.854 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:09.854 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:09.854 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:09.854 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:09.854 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:09.854 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:09.854 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:16:09.854 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:09.864 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:09.864 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:09.864 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:16:09.864 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:09.864 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:16:09.864 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:09.874 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:16:09.874 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:16:09.874 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:16:09.874 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:16:09.884 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 37112 150\n [Camera]
17-03-18 03:16:10.084 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:10.484 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:10.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:10.484 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:10.484 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:10.484 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) start.
17-03-18 03:16:10.484 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:10.484 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:10.484 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:10.484 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:10.484 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:16:10.674 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37112 788
17-03-18 03:16:10.824 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:10.864 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:16:10.864 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:16:10.864 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:10.864 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:16:10.864 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:16:10.864 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:10.864 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:10.864 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:10.864 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:16:10.874 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:16:11.024 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:11.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:11.024 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:11.024 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:11.024 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:11.024 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:11.034 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:11.034 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) start.
17-03-18 03:16:11.034 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:11.034 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:16:11.214 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:16:11.214 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:11.214 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 37112 150' command took 2 ms to send, 1323 ms to get response, and 1331 ms overall
17-03-18 03:16:11.214 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.169921
17-03-18 03:16:11.214 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.16992 mm
17-03-18 03:16:11.214 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:11.214 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:16:11.214 -07 000000461 INF: Y Motor: Moving to 67.3826 mm, started at 66.5381 mm, delta = 0.8445 mm
17-03-18 03:16:11.214 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:11.214 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 37119, sync = True, waitForSettling = False)
17-03-18 03:16:11.214 -07 000000561 INF: Z Motor: Moving to -0.169920 mm, started at -0.169090 mm, distance = -0.83 um
17-03-18 03:16:11.224 -07 000000561 INF: FPGA: Xmit ZDACW 37119\n [Z Motor]
17-03-18 03:16:11.224 -07 000000590 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:16:11.224 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 4 ms to get response, and 5 ms overall
17-03-18 03:16:11.224 -07 000000461 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:11.224 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:16:11.224 -07 000000461 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:11.224 -07 000000461 INF: Y Motor: Moving 1350 steps-30
17-03-18 03:16:11.234 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:11.234 -07 000000561 INF: FPGA: 'ZDACW 37119' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:11.244 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:11.244 -07 000000467 INF: FPGA: Recv ZDACR 37119
17-03-18 03:16:11.254 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:16:11.254 -07 000000561 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:16:11.414 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:16:11.414 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:16:11.414 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:16:11.414 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:11.414 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:16:11.414 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:11.424 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:11.424 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:11.424 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:16:11.434 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:16:11.554 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:11.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:11.604 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 03:16:11.604 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:16:11.654 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:11.654 -07 000000444 INF: FPGA: Recv YRDPOS 137976
17-03-18 03:16:11.664 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:16:11.664 -07 000000461 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:11.664 -07 000000461 INF: Y Motor: Position error before settling (table move) = -24 encoder counts (-0.012 mm)
17-03-18 03:16:11.664 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.845 mm, average velocity = 2.234 mm/sec
17-03-18 03:16:12.614 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:12.614 -07 000000561 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:16:12.624 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:12.624 -07 000000461 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:12.644 -07 000000461 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:12.644 -07 000000461 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:16:12.644 -07 000000461 INF: Y Motor: Moved to 67.3716 after 1430 ms (table move)
17-03-18 03:16:12.654 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169920 mm (DAC = 37119)
17-03-18 03:16:12.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.654 -07 000000626 INF: FPGA: Recv ZSGSRD 35738
17-03-18 03:16:12.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:16:12.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.664 -07 000000501 INF: FPGA: Recv ZSGSRD 35744
17-03-18 03:16:12.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.674 -07 000000629 INF: FPGA: Recv ZSGSRD 35741
17-03-18 03:16:12.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.684 -07 000000561 INF: FPGA: Recv ZSGSRD 35743
17-03-18 03:16:12.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.694 -07 000000576 INF: FPGA: Recv ZSGSRD 35740
17-03-18 03:16:12.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.704 -07 000000618 INF: FPGA: Recv ZSGSRD 35736
17-03-18 03:16:12.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.714 -07 000000501 INF: FPGA: Recv ZSGSRD 35741
17-03-18 03:16:12.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.724 -07 000000579 INF: FPGA: Recv ZSGSRD 35732
17-03-18 03:16:12.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.734 -07 000000569 INF: FPGA: Recv ZSGSRD 35738
17-03-18 03:16:12.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.744 -07 000000455 INF: FPGA: Recv ZSGSRD 35740
17-03-18 03:16:12.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.754 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:12.754 -07 000000502 INF: FPGA: Recv ZPIEZORD 31595
17-03-18 03:16:12.764 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.764 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.664 V. Piezo Error = -9.1 V.
17-03-18 03:16:12.764 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.9 um, Read 10 ADC samples: Avg = 35739 (-169.0 uncal um), Error = 0.9 uncal um, Median = 35740 (-169.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35732 (-169.0 uncal um), Max = 35744 (-169.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:16:12.764 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35739, posNoise = 5, negNoise = 7
17-03-18 03:16:12.764 -07 000000610 INF: Z Motor: After move to -0.169920, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:12.764 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 110 ms (allowed 150 ms), total time = 1541 ms
17-03-18 03:16:12.764 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:12.804 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1584 ms
17-03-18 03:16:12.804 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:12.804 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.16991826974553. ----------
17-03-18 03:16:12.804 -07 000000610 INF: Cycle	110	Tile	10	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:12.804 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36942, sync = True, waitForSettling = True)
17-03-18 03:16:12.804 -07 000000610 INF: Z Motor: Moving to -0.169110 mm, started at -0.169918 mm, distance = 0.81 um
17-03-18 03:16:12.804 -07 000000610 INF: FPGA: Xmit ZDACW 36942\n [Z Motor]
17-03-18 03:16:12.804 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:16:12.814 -07 000000610 INF: FPGA: 'ZDACW 36942' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:16:12.814 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:12.814 -07 000000430 INF: FPGA: Recv ZDACR 36942
17-03-18 03:16:12.824 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.824 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:12.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.974 -07 000000512 INF: FPGA: Recv ZSGSRD 35617
17-03-18 03:16:12.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:12.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.984 -07 000000444 INF: FPGA: Recv ZSGSRD 35615
17-03-18 03:16:12.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:12.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:12.994 -07 000000618 INF: FPGA: Recv ZSGSRD 35619
17-03-18 03:16:13.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:13.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:13.004 -07 000000569 INF: FPGA: Recv ZSGSRD 35616
17-03-18 03:16:13.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:13.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:13.014 -07 000000430 INF: FPGA: Recv ZSGSRD 35612
17-03-18 03:16:13.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:13.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:13.024 -07 000000626 INF: FPGA: Recv ZSGSRD 35618
17-03-18 03:16:13.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:13.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:13.034 -07 000000455 INF: FPGA: Recv ZSGSRD 35612
17-03-18 03:16:13.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:13.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:13.044 -07 000000424 INF: FPGA: Recv ZSGSRD 35614
17-03-18 03:16:13.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:13.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:13.054 -07 000000576 INF: FPGA: Recv ZSGSRD 35615
17-03-18 03:16:13.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:13.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:13.064 -07 000000467 INF: FPGA: Recv ZSGSRD 35616
17-03-18 03:16:13.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:13.074 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:13.074 -07 000000626 INF: FPGA: Recv ZPIEZORD 31389
17-03-18 03:16:13.084 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:13.084 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.637 V. Piezo Error = -9.3 V.
17-03-18 03:16:13.084 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35615 (-168.2 uncal um), Error = 0.9 uncal um, Median = 35616 (-168.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35612 (-168.2 uncal um), Max = 35619 (-168.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:16:13.084 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35615, posNoise = 4, negNoise = 3
17-03-18 03:16:13.084 -07 000000610 INF: Z Motor: After move to -0.169110, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:13.084 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:16:13.084 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:13.084 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:13.084 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:13.084 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:13.084 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:13.084 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:13.084 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:13.084 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:13.084 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:13.084 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:13.084 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:13.084 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:13.094 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:16:13.094 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:13.094 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:16:13.094 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:13.104 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:16:13.104 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:16:13.104 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:16:13.104 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:16:13.104 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 37119 150\n [Camera]
17-03-18 03:16:13.304 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:13.714 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:13.714 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:13.714 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:13.714 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:13.714 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 654475248, 0x0, 391868352) start.
17-03-18 03:16:13.714 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:13.714 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:13.714 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:13.714 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:13.714 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:16:13.904 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37119 788
17-03-18 03:16:14.054 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:14.094 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:16:14.094 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 654475248, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:16:14.094 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:16:14.094 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:14.094 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:16:14.094 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:14.094 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:14.094 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:16:14.094 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:14.104 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:16:14.244 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:14.244 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:14.244 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:14.254 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:14.254 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 03:16:14.254 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:14.254 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:14.254 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:14.254 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:14.254 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:16:14.444 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:16:14.444 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:14.444 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 37119 150' command took 2 ms to send, 1321 ms to get response, and 1331 ms overall
17-03-18 03:16:14.444 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.169413
17-03-18 03:16:14.444 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16941 mm
17-03-18 03:16:14.444 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:14.444 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:16:14.444 -07 000000512 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-18 03:16:14.444 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:14.444 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 37008, sync = True, waitForSettling = False)
17-03-18 03:16:14.444 -07 000000618 INF: Z Motor: Moving to -0.169412 mm, started at -0.169122 mm, distance = -0.29 um
17-03-18 03:16:14.444 -07 000000467 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:16:14.454 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:16:14.454 -07 000000512 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:14.454 -07 000000512 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:14.454 -07 000000512 INF: Y Motor: Moving 1346 steps-24
17-03-18 03:16:14.454 -07 000000618 INF: FPGA: Xmit ZDACW 37008\n [Z Motor]
17-03-18 03:16:14.454 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:16:14.464 -07 000000618 INF: FPGA: 'ZDACW 37008' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:16:14.464 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:14.474 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:14.474 -07 000000579 INF: FPGA: Recv ZDACR 37008
17-03-18 03:16:14.484 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:16:14.484 -07 000000618 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-18 03:16:14.644 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:16:14.644 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:16:14.644 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:14.644 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 391 ms.
17-03-18 03:16:14.644 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:16:14.644 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:14.644 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:14.644 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:16:14.644 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:14.654 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:16:14.834 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:16:14.834 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:16:14.894 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:14.894 -07 000000569 INF: FPGA: Recv YRDPOS 139682
17-03-18 03:16:14.904 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:16:14.904 -07 000000512 INF: Y Motor: Encoder = 139682 = motor step 109126.6 = 68.2041 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:14.904 -07 000000512 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 03:16:14.904 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.841 mm, average velocity = 2.168 mm/sec
17-03-18 03:16:15.204 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.014009,
17-03-18 03:16:15.854 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:15.854 -07 000000591 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:16:15.864 -07 000000512 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:15.864 -07 000000512 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:15.884 -07 000000512 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:15.884 -07 000000512 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:16:15.884 -07 000000512 INF: Y Motor: Moved to 68.2046 after 1443 ms (table move)
17-03-18 03:16:15.894 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169412 mm (DAC = 37008)
17-03-18 03:16:15.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:15.894 -07 000000629 INF: FPGA: Recv ZSGSRD 35660
17-03-18 03:16:15.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:16:15.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:15.904 -07 000000462 INF: FPGA: Recv ZSGSRD 35666
17-03-18 03:16:15.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:15.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:15.914 -07 000000430 INF: FPGA: Recv ZSGSRD 35661
17-03-18 03:16:15.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:15.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:15.924 -07 000000579 INF: FPGA: Recv ZSGSRD 35659
17-03-18 03:16:15.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:15.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:15.934 -07 000000502 INF: FPGA: Recv ZSGSRD 35657
17-03-18 03:16:15.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:15.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:15.944 -07 000000501 INF: FPGA: Recv ZSGSRD 35658
17-03-18 03:16:15.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:15.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:15.954 -07 000000618 INF: FPGA: Recv ZSGSRD 35663
17-03-18 03:16:15.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:15.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:15.964 -07 000000576 INF: FPGA: Recv ZSGSRD 35665
17-03-18 03:16:15.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:15.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:15.974 -07 000000561 INF: FPGA: Recv ZSGSRD 35665
17-03-18 03:16:15.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:15.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:15.984 -07 000000512 INF: FPGA: Recv ZSGSRD 35671
17-03-18 03:16:15.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:15.994 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:15.994 -07 000000467 INF: FPGA: Recv ZPIEZORD 31467
17-03-18 03:16:16.004 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.004 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.647 V. Piezo Error = -9.2 V.
17-03-18 03:16:16.004 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.4 um, Read 10 ADC samples: Avg = 35662 (-168.6 uncal um), Error = 0.9 uncal um, Median = 35662 (-168.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35657 (-168.5 uncal um), Max = 35671 (-168.6 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:16:16.004 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35662, posNoise = 9, negNoise = 5
17-03-18 03:16:16.004 -07 000000610 INF: Z Motor: After move to -0.169412, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:16.004 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 109 ms (allowed 150 ms), total time = 1554 ms
17-03-18 03:16:16.004 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:16.054 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms
17-03-18 03:16:16.054 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:16.054 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.169423605410614. ----------
17-03-18 03:16:16.054 -07 000000610 INF: Cycle	110	Tile	11	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:16.054 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36832, sync = True, waitForSettling = True)
17-03-18 03:16:16.054 -07 000000610 INF: Z Motor: Moving to -0.168606 mm, started at -0.169424 mm, distance = 0.82 um
17-03-18 03:16:16.054 -07 000000610 INF: FPGA: Xmit ZDACW 36832\n [Z Motor]
17-03-18 03:16:16.054 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:16:16.064 -07 000000610 INF: FPGA: 'ZDACW 36832' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:16:16.064 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:16.064 -07 000000502 INF: FPGA: Recv ZDACR 36832
17-03-18 03:16:16.074 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.074 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:16.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:16.224 -07 000000629 INF: FPGA: Recv ZSGSRD 35536
17-03-18 03:16:16.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:16.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:16.234 -07 000000424 INF: FPGA: Recv ZSGSRD 35533
17-03-18 03:16:16.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:16.244 -07 000000430 INF: FPGA: Recv ZSGSRD 35536
17-03-18 03:16:16.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:16.254 -07 000000561 INF: FPGA: Recv ZSGSRD 35536
17-03-18 03:16:16.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:16.264 -07 000000461 INF: FPGA: Recv ZSGSRD 35536
17-03-18 03:16:16.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:16.274 -07 000000501 INF: FPGA: Recv ZSGSRD 35539
17-03-18 03:16:16.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:16.284 -07 000000618 INF: FPGA: Recv ZSGSRD 35542
17-03-18 03:16:16.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:16.294 -07 000000467 INF: FPGA: Recv ZSGSRD 35537
17-03-18 03:16:16.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:16.304 -07 000000444 INF: FPGA: Recv ZSGSRD 35538
17-03-18 03:16:16.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:16.314 -07 000000502 INF: FPGA: Recv ZSGSRD 35541
17-03-18 03:16:16.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.324 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:16.324 -07 000000569 INF: FPGA: Recv ZPIEZORD 31282
17-03-18 03:16:16.334 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:16.334 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.620 V. Piezo Error = -9.4 V.
17-03-18 03:16:16.334 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35537 (-167.7 uncal um), Error = 0.9 uncal um, Median = 35536 (-167.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35533 (-167.7 uncal um), Max = 35542 (-167.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:16:16.334 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35537, posNoise = 5, negNoise = 4
17-03-18 03:16:16.334 -07 000000610 INF: Z Motor: After move to -0.168606, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:16.334 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:16:16.334 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:16.334 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:16.334 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:16.334 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:16.334 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:16.334 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:16.334 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:16.334 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:16.334 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:16.334 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:16.334 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:16.334 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:16.344 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:16:16.344 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:16.344 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:16:16.344 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:16.354 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:16:16.354 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:16:16.354 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:16:16.354 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:16:16.364 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 37008 150\n [Camera]
17-03-18 03:16:16.554 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:16.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:16.564 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:16.964 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:16.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:16.964 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:16.964 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:16.964 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:16:16.964 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:16.964 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:16.964 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:16.964 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:16.964 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:16:17.154 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37008 788
17-03-18 03:16:17.304 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:17.364 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 395 ms.
17-03-18 03:16:17.364 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:16:17.364 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:17.364 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 394 ms.
17-03-18 03:16:17.364 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:16:17.364 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:17.364 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:17.364 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:16:17.364 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:17.374 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-18 03:16:17.504 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:17.504 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:17.504 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:17.504 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:17.504 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:16:17.504 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:17.504 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:17.504 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:17.504 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:17.504 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:16:17.694 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:16:17.694 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:17.694 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 37008 150' command took 2 ms to send, 1322 ms to get response, and 1331 ms overall
17-03-18 03:16:17.694 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.169261
17-03-18 03:16:17.694 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.16926 mm
17-03-18 03:16:17.694 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:17.694 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:16:17.694 -07 000000576 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm
17-03-18 03:16:17.694 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:17.694 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 36975, sync = True, waitForSettling = False)
17-03-18 03:16:17.694 -07 000000462 INF: Z Motor: Moving to -0.169261 mm, started at -0.168621 mm, distance = -0.64 um
17-03-18 03:16:17.704 -07 000000467 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:16:17.704 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:16:17.704 -07 000000576 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:17.704 -07 000000576 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:17.704 -07 000000576 INF: Y Motor: Moving 1341 steps-17
17-03-18 03:16:17.704 -07 000000462 INF: FPGA: Xmit ZDACW 36975\n [Z Motor]
17-03-18 03:16:17.704 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:16:17.714 -07 000000462 INF: FPGA: 'ZDACW 36975' command took 1 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:16:17.714 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:17.714 -07 000000444 INF: FPGA: Recv ZDACR 36975
17-03-18 03:16:17.724 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:17.724 -07 000000462 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:16:17.724 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:17.884 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:16:17.884 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:16:17.884 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:17.884 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:16:17.884 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:16:17.884 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:17.884 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:17.894 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:17.894 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:16:17.894 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:16:18.104 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:16:18.104 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 399 ms overall
17-03-18 03:16:18.144 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:18.154 -07 000000430 INF: FPGA: Recv YRDPOS 141366
17-03-18 03:16:18.154 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:16:18.154 -07 000000576 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:18.154 -07 000000576 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 03:16:18.154 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.838 mm, average velocity = 2.100 mm/sec
17-03-18 03:16:19.104 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:19.104 -07 000000569 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:16:19.114 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:19.114 -07 000000576 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:19.134 -07 000000576 INF: Y Motor: After move to 69.042610, error = -0.015755, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:19.134 -07 000000576 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:16:19.134 -07 000000576 INF: Y Motor: Moved to 69.0269 after 1442 ms (table move)
17-03-18 03:16:19.144 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169261 mm (DAC = 36975)
17-03-18 03:16:19.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.144 -07 000000461 INF: FPGA: Recv ZSGSRD 35639
17-03-18 03:16:19.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:16:19.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.154 -07 000000590 INF: FPGA: Recv ZSGSRD 35640
17-03-18 03:16:19.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.164 -07 000000626 INF: FPGA: Recv ZSGSRD 35628
17-03-18 03:16:19.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.174 -07 000000424 INF: FPGA: Recv ZSGSRD 35641
17-03-18 03:16:19.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.184 -07 000000629 INF: FPGA: Recv ZSGSRD 35638
17-03-18 03:16:19.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.194 -07 000000501 INF: FPGA: Recv ZSGSRD 35638
17-03-18 03:16:19.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.204 -07 000000569 INF: FPGA: Recv ZSGSRD 35644
17-03-18 03:16:19.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.214 -07 000000606 INF: FPGA: Recv ZSGSRD 35638
17-03-18 03:16:19.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.224 -07 000000512 INF: FPGA: Recv ZSGSRD 35633
17-03-18 03:16:19.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.234 -07 000000629 INF: FPGA: Recv ZSGSRD 35634
17-03-18 03:16:19.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.244 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:19.244 -07 000000591 INF: FPGA: Recv ZPIEZORD 31475
17-03-18 03:16:19.254 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.254 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.642 V. Piezo Error = -9.2 V.
17-03-18 03:16:19.254 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35637 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35638 (-168.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35628 (-168.3 uncal um), Max = 35644 (-168.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:16:19.254 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35637, posNoise = 7, negNoise = 9
17-03-18 03:16:19.254 -07 000000610 INF: Z Motor: After move to -0.169261, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:19.254 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 107 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:16:19.254 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:19.304 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms
17-03-18 03:16:19.304 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:19.304 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02685546875, Z-position -0.16926300010707. ----------
17-03-18 03:16:19.304 -07 000000610 INF: Cycle	110	Tile	12	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:19.304 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36798, sync = True, waitForSettling = True)
17-03-18 03:16:19.304 -07 000000610 INF: Z Motor: Moving to -0.168450 mm, started at -0.169263 mm, distance = 0.81 um
17-03-18 03:16:19.304 -07 000000610 INF: FPGA: Xmit ZDACW 36798\n [Z Motor]
17-03-18 03:16:19.304 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:16:19.314 -07 000000610 INF: FPGA: 'ZDACW 36798' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:16:19.314 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:19.314 -07 000000461 INF: FPGA: Recv ZDACR 36798
17-03-18 03:16:19.324 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.324 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:19.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.474 -07 000000467 INF: FPGA: Recv ZSGSRD 35514
17-03-18 03:16:19.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:19.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.484 -07 000000455 INF: FPGA: Recv ZSGSRD 35518
17-03-18 03:16:19.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.494 -07 000000606 INF: FPGA: Recv ZSGSRD 35513
17-03-18 03:16:19.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.504 -07 000000424 INF: FPGA: Recv ZSGSRD 35512
17-03-18 03:16:19.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.514 -07 000000618 INF: FPGA: Recv ZSGSRD 35512
17-03-18 03:16:19.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.524 -07 000000590 INF: FPGA: Recv ZSGSRD 35508
17-03-18 03:16:19.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.534 -07 000000626 INF: FPGA: Recv ZSGSRD 35513
17-03-18 03:16:19.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.544 -07 000000462 INF: FPGA: Recv ZSGSRD 35509
17-03-18 03:16:19.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.554 -07 000000591 INF: FPGA: Recv ZSGSRD 35513
17-03-18 03:16:19.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:19.564 -07 000000561 INF: FPGA: Recv ZSGSRD 35513
17-03-18 03:16:19.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.574 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:19.574 -07 000000444 INF: FPGA: Recv ZPIEZORD 31279
17-03-18 03:16:19.584 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:19.584 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.615 V. Piezo Error = -9.3 V.
17-03-18 03:16:19.584 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.5 um, Read 10 ADC samples: Avg = 35512 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35513 (-167.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35508 (-167.6 uncal um), Max = 35518 (-167.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:16:19.584 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35512, posNoise = 6, negNoise = 4
17-03-18 03:16:19.584 -07 000000610 INF: Z Motor: After move to -0.168450, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:19.584 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:16:19.584 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:19.584 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:19.584 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:19.584 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:19.584 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:19.584 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:19.584 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:19.584 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:19.584 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:19.584 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:19.584 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:19.584 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:19.584 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:16:19.594 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:16:19.594 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:19.594 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:19.604 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:16:19.604 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:16:19.604 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:16:19.604 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:16:19.614 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 36975 150\n [Camera]
17-03-18 03:16:19.804 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:20.214 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:20.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:20.214 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:20.214 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:20.214 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:16:20.214 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:20.214 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:20.214 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:20.214 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:20.214 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 03:16:20.404 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36975 788
17-03-18 03:16:20.554 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:20.564 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.026244,
17-03-18 03:16:20.614 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 03:16:20.614 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:16:20.614 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:20.614 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 03:16:20.614 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:16:20.614 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:20.614 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:20.614 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:16:20.614 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:20.624 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-18 03:16:20.754 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:20.754 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:20.754 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:20.754 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:20.754 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 03:16:20.754 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:20.754 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:20.754 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:20.754 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:20.754 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 03:16:20.944 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:16:20.944 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:20.944 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 36975 150' command took 2 ms to send, 1321 ms to get response, and 1331 ms overall
17-03-18 03:16:20.944 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:16:20.944 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 13 at Y-position 69.02685546875, Z-Position -0.16845997358935. ------
17-03-18 03:16:20.944 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:16:20.944 -07 000000455 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.17479 mm
17-03-18 03:16:20.944 -07 000000455 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:20.944 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:16:20.944 -07 000000606 INF: Y Motor: Moving to 69.8726 mm, started at 69.0269 mm, delta = 0.8458 mm
17-03-18 03:16:20.944 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 38183, sync = True, waitForSettling = False)
17-03-18 03:16:20.944 -07 000000512 INF: Z Motor: Moving to -0.174791 mm, started at -0.168460 mm, distance = -6.33 um
17-03-18 03:16:20.944 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:16:20.954 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:16:20.954 -07 000000512 INF: FPGA: Xmit ZDACW 38183\n [Z Motor]
17-03-18 03:16:20.954 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:16:20.964 -07 000000512 INF: FPGA: 'ZDACW 38183' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:20.964 -07 000000462 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:16:20.974 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:20.974 -07 000000444 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:16:20.984 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-18 03:16:20.984 -07 000000606 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:20.984 -07 000000606 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:20.984 -07 000000606 INF: Y Motor: Moving 1353 steps-33
17-03-18 03:16:20.984 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:20.984 -07 000000467 INF: FPGA: Recv ZDACR 38183
17-03-18 03:16:20.994 -07 000000512 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:16:20.994 -07 000000512 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-18 03:16:20.994 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:21.134 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:16:21.134 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:16:21.134 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:21.134 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:16:21.134 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:16:21.134 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:21.134 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:21.134 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:16:21.134 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:21.144 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:16:21.164 -07 000000467 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:16:21.164 -07 000000462 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 212 ms overall
17-03-18 03:16:21.364 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:16:21.364 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall
17-03-18 03:16:21.424 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:21.424 -07 000000576 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:16:21.434 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:16:21.434 -07 000000606 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:21.434 -07 000000606 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:16:21.434 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.846 mm, average velocity = 2.174 mm/sec
17-03-18 03:16:21.554 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:21.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:22.384 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:22.384 -07 000000512 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:16:22.394 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:22.394 -07 000000606 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:22.424 -07 000000606 INF: Y Motor: After move to 69.872612, error = -0.009819, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:22.424 -07 000000606 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:16:22.424 -07 000000606 INF: Y Motor: Moved to 69.8628 after 1471 ms (table move)
17-03-18 03:16:22.424 -07 000000455 INF: Z Motor: EndOfMoveAbsStepped: target = -0.174791 mm (DAC = 38183)
17-03-18 03:16:22.424 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:22.424 -07 000000579 INF: FPGA: Recv ZSGSRD 36502
17-03-18 03:16:22.434 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:16:22.434 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:22.434 -07 000000512 INF: FPGA: Recv ZSGSRD 36492
17-03-18 03:16:22.444 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:22.444 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:22.444 -07 000000569 INF: FPGA: Recv ZSGSRD 36497
17-03-18 03:16:22.454 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:22.454 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:22.454 -07 000000618 INF: FPGA: Recv ZSGSRD 36492
17-03-18 03:16:22.464 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:22.464 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:22.464 -07 000000444 INF: FPGA: Recv ZSGSRD 36496
17-03-18 03:16:22.474 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:22.474 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:22.474 -07 000000561 INF: FPGA: Recv ZSGSRD 36502
17-03-18 03:16:22.484 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:22.484 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:22.484 -07 000000502 INF: FPGA: Recv ZSGSRD 36503
17-03-18 03:16:22.494 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:22.494 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:22.494 -07 000000430 INF: FPGA: Recv ZSGSRD 36503
17-03-18 03:16:22.504 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:22.504 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:22.504 -07 000000424 INF: FPGA: Recv ZSGSRD 36506
17-03-18 03:16:22.514 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:22.514 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:22.514 -07 000000444 INF: FPGA: Recv ZSGSRD 36503
17-03-18 03:16:22.524 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:22.524 -07 000000455 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:22.524 -07 000000576 INF: FPGA: Recv ZPIEZORD 32622
17-03-18 03:16:22.534 -07 000000455 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:22.534 -07 000000455 INF: Z Motor: Piezo is near 49.7 V (nominally 0 to 100 V), expect near 58.3 V, since DAC is at 5.826 V. Piezo Error = -8.6 V.
17-03-18 03:16:22.534 -07 000000455 INF: Z Motor: ReadAdcAverage: Commanded Z = -174.8 um, Read 10 ADC samples: Avg = 36500 (-173.9 uncal um), Error = 0.9 uncal um, Median = 36502 (-173.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36492 (-173.9 uncal um), Max = 36506 (-174.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:16:22.534 -07 000000455 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36500, posNoise = 6, negNoise = 8
17-03-18 03:16:22.534 -07 000000455 INF: Z Motor: After move to -0.174791, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:22.534 -07 000000455 INF: Z Motor: Settle wait time = 1475 ms, measure time = 106 ms (allowed 150 ms), total time = 1581 ms
17-03-18 03:16:22.534 -07 000000455 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:22.584 -07 000000455 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1633 ms
17-03-18 03:16:22.584 -07 000000455 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:22.584 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:22.584 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:22.584 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:22.584 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:22.584 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:16:22.584 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:22.584 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:22.584 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:16:22.584 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:16:22.584 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:16:22.604 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:16:22.604 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:16:22.604 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:16:22.654 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:16:22.954 -07 000000462 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:16:22.954 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:16:22.954 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:16:22.954 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) start.
17-03-18 03:16:22.984 -07 000000444 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:16:22.994 -07 000000569 INF: FPGA: Recv CAMSNAP
17-03-18 03:16:22.994 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall
17-03-18 03:16:23.074 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 03:16:23.074 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:23.084 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 03:16:23.084 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:16:23.094 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:16:23.094 -07 000000455 INF: Autofocus start
17-03-18 03:16:23.094 -07 000000455 INF: MeasureProfile start
17-03-18 03:16:23.094 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:16:23.104 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:16:23.104 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:16:23.104 -07 000000455 INF: MeasureProfile done
17-03-18 03:16:23.104 -07 000000455 INF: X=0  Z correction [um]=-0.0713522
17-03-18 03:16:23.104 -07 000000455 INF: Autofocus finished
17-03-18 03:16:23.304 -07 000000444 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:16:23.304 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-18 03:16:23.304 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86279296875, Z-position -0.17480709518541. ----------
17-03-18 03:16:23.304 -07 000000610 INF: Cycle	110	Tile	13	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:23.314 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36680, sync = True, waitForSettling = True)
17-03-18 03:16:23.314 -07 000000610 INF: Z Motor: Moving to -0.167910 mm, started at -0.174807 mm, distance = 6.90 um
17-03-18 03:16:23.314 -07 000000610 INF: FPGA: Xmit ZDACW 36680\n [Z Motor]
17-03-18 03:16:23.314 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:16:23.324 -07 000000610 INF: FPGA: 'ZDACW 36680' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:16:23.324 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:23.324 -07 000000444 INF: FPGA: Recv ZDACR 36680
17-03-18 03:16:23.334 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.334 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:23.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:23.484 -07 000000467 INF: FPGA: Recv ZSGSRD 35418
17-03-18 03:16:23.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:23.494 -07 000000461 INF: FPGA: Recv ZSGSRD 35431
17-03-18 03:16:23.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:23.504 -07 000000430 INF: FPGA: Recv ZSGSRD 35426
17-03-18 03:16:23.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:23.514 -07 000000626 INF: FPGA: Recv ZSGSRD 35422
17-03-18 03:16:23.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:23.524 -07 000000569 INF: FPGA: Recv ZSGSRD 35433
17-03-18 03:16:23.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:23.534 -07 000000467 INF: FPGA: Recv ZSGSRD 35430
17-03-18 03:16:23.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:23.544 -07 000000461 INF: FPGA: Recv ZSGSRD 35425
17-03-18 03:16:23.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:23.554 -07 000000590 INF: FPGA: Recv ZSGSRD 35425
17-03-18 03:16:23.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:23.564 -07 000000455 INF: FPGA: Recv ZSGSRD 35428
17-03-18 03:16:23.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:23.574 -07 000000606 INF: FPGA: Recv ZSGSRD 35431
17-03-18 03:16:23.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.584 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:23.584 -07 000000501 INF: FPGA: Recv ZPIEZORD 31170
17-03-18 03:16:23.594 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:23.594 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.597 V. Piezo Error = -9.4 V.
17-03-18 03:16:23.594 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35427 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35427 (-167.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35418 (-167.0 uncal um), Max = 35433 (-167.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:16:23.594 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35427, posNoise = 6, negNoise = 9
17-03-18 03:16:23.594 -07 000000610 INF: Z Motor: After move to -0.167910, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:23.594 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:16:23.594 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:23.594 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:23.594 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:23.594 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:23.594 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:23.594 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:23.594 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:23.594 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:23.594 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:23.594 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:23.594 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:23.594 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:23.604 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:16:23.604 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:23.604 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:16:23.604 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:23.604 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:16:23.604 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:16:23.614 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:16:23.614 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:16:23.614 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 36857 150\n [Camera]
17-03-18 03:16:23.814 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:24.214 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:24.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:24.214 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:24.214 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:24.214 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-18 03:16:24.214 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:24.214 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:24.214 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:24.224 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:24.224 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-18 03:16:24.404 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36857 788
17-03-18 03:16:24.554 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:24.594 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:16:24.594 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:16:24.594 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:24.594 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:16:24.594 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:16:24.594 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:24.594 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:24.604 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:24.604 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:16:24.604 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:16:24.754 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:24.754 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:24.754 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:24.754 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:24.754 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:24.754 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:24.754 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start.
17-03-18 03:16:24.754 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:24.754 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:24.754 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-18 03:16:24.944 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:16:24.944 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:24.944 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 36857 150' command took 2 ms to send, 1325 ms to get response, and 1331 ms overall
17-03-18 03:16:24.944 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.167853
17-03-18 03:16:24.944 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16785 mm
17-03-18 03:16:24.944 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:24.944 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:16:24.954 -07 000000629 INF: Y Motor: Moving to 70.7026 mm, started at 69.8628 mm, delta = 0.8398 mm
17-03-18 03:16:24.954 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:24.954 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 36667, sync = True, waitForSettling = False)
17-03-18 03:16:24.954 -07 000000444 INF: Z Motor: Moving to -0.167851 mm, started at -0.167914 mm, distance = 0.06 um
17-03-18 03:16:24.954 -07 000000579 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:16:24.964 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:24.964 -07 000000629 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:24.964 -07 000000629 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:24.964 -07 000000629 INF: Y Motor: Moving 1344 steps-20
17-03-18 03:16:24.964 -07 000000444 INF: FPGA: Xmit ZDACW 36667\n [Z Motor]
17-03-18 03:16:24.964 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:16:24.974 -07 000000444 INF: FPGA: 'ZDACW 36667' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:16:24.974 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:24.974 -07 000000502 INF: FPGA: Recv ZDACR 36667
17-03-18 03:16:24.984 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:24.984 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:24.984 -07 000000444 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 03:16:25.134 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:16:25.134 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:16:25.134 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:25.134 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:16:25.134 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:16:25.134 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:25.144 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:25.144 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:16:25.144 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:16:25.144 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:16:25.354 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:16:25.354 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:16:25.404 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:25.404 -07 000000618 INF: FPGA: Recv YRDPOS 144768
17-03-18 03:16:25.414 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:16:25.414 -07 000000629 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:25.414 -07 000000629 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:16:25.414 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.110 mm/sec
17-03-18 03:16:25.924 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.016692,
17-03-18 03:16:26.364 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:26.364 -07 000000467 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:16:26.374 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:26.374 -07 000000629 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:26.394 -07 000000629 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:26.394 -07 000000629 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:16:26.404 -07 000000629 INF: Y Motor: Moved to 70.6880 after 1449 ms (table move)
17-03-18 03:16:26.404 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167851 mm (DAC = 36667)
17-03-18 03:16:26.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.404 -07 000000618 INF: FPGA: Recv ZSGSRD 35422
17-03-18 03:16:26.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:16:26.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.414 -07 000000501 INF: FPGA: Recv ZSGSRD 35418
17-03-18 03:16:26.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.424 -07 000000430 INF: FPGA: Recv ZSGSRD 35427
17-03-18 03:16:26.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.434 -07 000000579 INF: FPGA: Recv ZSGSRD 35412
17-03-18 03:16:26.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.444 -07 000000629 INF: FPGA: Recv ZSGSRD 35419
17-03-18 03:16:26.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.454 -07 000000569 INF: FPGA: Recv ZSGSRD 35424
17-03-18 03:16:26.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.464 -07 000000606 INF: FPGA: Recv ZSGSRD 35411
17-03-18 03:16:26.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.474 -07 000000467 INF: FPGA: Recv ZSGSRD 35422
17-03-18 03:16:26.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.484 -07 000000590 INF: FPGA: Recv ZSGSRD 35423
17-03-18 03:16:26.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.494 -07 000000430 INF: FPGA: Recv ZSGSRD 35416
17-03-18 03:16:26.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.504 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:26.504 -07 000000462 INF: FPGA: Recv ZPIEZORD 31189
17-03-18 03:16:26.514 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.514 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.595 V. Piezo Error = -9.3 V.
17-03-18 03:16:26.514 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35419 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35420 (-167.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35411 (-166.9 uncal um), Max = 35427 (-167.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:16:26.514 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35419, posNoise = 8, negNoise = 8
17-03-18 03:16:26.514 -07 000000610 INF: Z Motor: After move to -0.167851, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:26.514 -07 000000610 INF: Z Motor: Settle wait time = 1452 ms, measure time = 107 ms (allowed 150 ms), total time = 1559 ms
17-03-18 03:16:26.514 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:26.554 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:26.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:26.564 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:16:26.564 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:26.564 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.167862521860166. ----------
17-03-18 03:16:26.564 -07 000000610 INF: Cycle	110	Tile	14	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:26.564 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36491, sync = True, waitForSettling = True)
17-03-18 03:16:26.564 -07 000000610 INF: Z Motor: Moving to -0.167045 mm, started at -0.167863 mm, distance = 0.82 um
17-03-18 03:16:26.564 -07 000000610 INF: FPGA: Xmit ZDACW 36491\n [Z Motor]
17-03-18 03:16:26.564 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:16:26.574 -07 000000610 INF: FPGA: 'ZDACW 36491' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:16:26.574 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:26.574 -07 000000561 INF: FPGA: Recv ZDACR 36491
17-03-18 03:16:26.584 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.584 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:26.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.734 -07 000000626 INF: FPGA: Recv ZSGSRD 35295
17-03-18 03:16:26.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:26.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.744 -07 000000424 INF: FPGA: Recv ZSGSRD 35295
17-03-18 03:16:26.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.754 -07 000000590 INF: FPGA: Recv ZSGSRD 35290
17-03-18 03:16:26.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.764 -07 000000591 INF: FPGA: Recv ZSGSRD 35293
17-03-18 03:16:26.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.774 -07 000000462 INF: FPGA: Recv ZSGSRD 35297
17-03-18 03:16:26.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.784 -07 000000629 INF: FPGA: Recv ZSGSRD 35293
17-03-18 03:16:26.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.794 -07 000000461 INF: FPGA: Recv ZSGSRD 35289
17-03-18 03:16:26.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.804 -07 000000512 INF: FPGA: Recv ZSGSRD 35299
17-03-18 03:16:26.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.814 -07 000000576 INF: FPGA: Recv ZSGSRD 35294
17-03-18 03:16:26.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:26.824 -07 000000455 INF: FPGA: Recv ZSGSRD 35294
17-03-18 03:16:26.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.834 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:26.834 -07 000000444 INF: FPGA: Recv ZPIEZORD 31024
17-03-18 03:16:26.844 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:26.844 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.568 V. Piezo Error = -9.4 V.
17-03-18 03:16:26.844 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35294 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35294 (-166.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35289 (-166.2 uncal um), Max = 35299 (-166.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:16:26.844 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35294, posNoise = 5, negNoise = 5
17-03-18 03:16:26.844 -07 000000610 INF: Z Motor: After move to -0.167045, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:26.844 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:16:26.844 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:26.844 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:26.844 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:26.844 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:26.844 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:26.844 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:26.844 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:26.844 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:26.844 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:26.844 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:26.844 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:16:26.844 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:26.854 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:16:26.854 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:26.854 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:16:26.854 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:26.864 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:16:26.864 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:16:26.864 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:16:26.864 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:16:26.864 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 36667 150\n [Camera]
17-03-18 03:16:27.064 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:27.464 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:27.464 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:27.464 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:27.464 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:27.464 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start.
17-03-18 03:16:27.474 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:27.474 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:27.474 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:27.474 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:27.474 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start.
17-03-18 03:16:27.664 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36667 788
17-03-18 03:16:27.804 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:27.844 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:16:27.844 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:16:27.844 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:27.844 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:16:27.844 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:16:27.844 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:27.854 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:27.854 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:16:27.854 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:27.864 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:16:28.004 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:28.004 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:28.004 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:28.004 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:28.004 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-18 03:16:28.004 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:28.004 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:28.004 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:28.004 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:28.004 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-18 03:16:28.194 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:16:28.194 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:28.194 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 36667 150' command took 2 ms to send, 1326 ms to get response, and 1331 ms overall
17-03-18 03:16:28.194 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.167773
17-03-18 03:16:28.194 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16777 mm
17-03-18 03:16:28.194 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:28.204 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:16:28.204 -07 000000579 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm
17-03-18 03:16:28.204 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:28.204 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 36650, sync = True, waitForSettling = False)
17-03-18 03:16:28.204 -07 000000502 INF: Z Motor: Moving to -0.167773 mm, started at -0.167059 mm, distance = -0.71 um
17-03-18 03:16:28.204 -07 000000444 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:16:28.214 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:16:28.214 -07 000000579 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:28.214 -07 000000579 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:28.214 -07 000000579 INF: Y Motor: Moving 1351 steps-31
17-03-18 03:16:28.214 -07 000000502 INF: FPGA: Xmit ZDACW 36650\n [Z Motor]
17-03-18 03:16:28.214 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:16:28.224 -07 000000502 INF: FPGA: 'ZDACW 36650' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:16:28.224 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:28.224 -07 000000501 INF: FPGA: Recv ZDACR 36650
17-03-18 03:16:28.234 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:28.234 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:28.234 -07 000000502 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 03:16:28.384 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:16:28.394 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:16:28.394 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:16:28.394 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:28.394 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:16:28.394 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:28.394 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:28.394 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:16:28.394 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:28.404 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:16:28.614 -07 000000430 INF: FPGA: Recv YMVTILE
17-03-18 03:16:28.614 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 401 ms overall
17-03-18 03:16:28.654 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:28.664 -07 000000444 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:16:28.664 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:16:28.664 -07 000000579 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:28.664 -07 000000579 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:16:28.664 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 401 ms, distance = 0.845 mm, average velocity = 2.106 mm/sec
17-03-18 03:16:29.614 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:29.614 -07 000000424 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:16:29.624 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:29.624 -07 000000579 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:29.644 -07 000000579 INF: Y Motor: After move to 71.532608, error = -0.014542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:29.644 -07 000000579 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:16:29.644 -07 000000579 INF: Y Motor: Moved to 71.5181 after 1449 ms (table move)
17-03-18 03:16:29.654 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167773 mm (DAC = 36650)
17-03-18 03:16:29.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.654 -07 000000561 INF: FPGA: Recv ZSGSRD 35399
17-03-18 03:16:29.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:16:29.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.664 -07 000000455 INF: FPGA: Recv ZSGSRD 35400
17-03-18 03:16:29.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:29.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.674 -07 000000626 INF: FPGA: Recv ZSGSRD 35401
17-03-18 03:16:29.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:29.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.684 -07 000000606 INF: FPGA: Recv ZSGSRD 35406
17-03-18 03:16:29.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:29.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.694 -07 000000424 INF: FPGA: Recv ZSGSRD 35409
17-03-18 03:16:29.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:29.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.704 -07 000000576 INF: FPGA: Recv ZSGSRD 35408
17-03-18 03:16:29.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:29.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.714 -07 000000455 INF: FPGA: Recv ZSGSRD 35414
17-03-18 03:16:29.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:29.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.724 -07 000000579 INF: FPGA: Recv ZSGSRD 35410
17-03-18 03:16:29.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:29.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.734 -07 000000569 INF: FPGA: Recv ZSGSRD 35401
17-03-18 03:16:29.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:29.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.744 -07 000000430 INF: FPGA: Recv ZSGSRD 35405
17-03-18 03:16:29.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:29.754 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:29.754 -07 000000467 INF: FPGA: Recv ZPIEZORD 31192
17-03-18 03:16:29.764 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:29.764 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.592 V. Piezo Error = -9.3 V.
17-03-18 03:16:29.764 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.8 um, Read 10 ADC samples: Avg = 35405 (-166.9 uncal um), Error = 0.9 uncal um, Median = 35406 (-166.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35399 (-166.9 uncal um), Max = 35414 (-167.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:16:29.764 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35405, posNoise = 9, negNoise = 6
17-03-18 03:16:29.764 -07 000000610 INF: Z Motor: After move to -0.167773, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:29.764 -07 000000610 INF: Z Motor: Settle wait time = 1451 ms, measure time = 108 ms (allowed 150 ms), total time = 1559 ms
17-03-18 03:16:29.764 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:29.814 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-18 03:16:29.814 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:29.814 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51806640625, Z-position -0.167772582890182. ----------
17-03-18 03:16:29.814 -07 000000610 INF: Cycle	110	Tile	15	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:29.814 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36473, sync = True, waitForSettling = True)
17-03-18 03:16:29.814 -07 000000610 INF: Z Motor: Moving to -0.166963 mm, started at -0.167773 mm, distance = 0.81 um
17-03-18 03:16:29.814 -07 000000610 INF: FPGA: Xmit ZDACW 36473\n [Z Motor]
17-03-18 03:16:29.814 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:16:29.824 -07 000000610 INF: FPGA: 'ZDACW 36473' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:16:29.824 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:29.824 -07 000000576 INF: FPGA: Recv ZDACR 36473
17-03-18 03:16:29.834 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:29.834 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:29.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.984 -07 000000444 INF: FPGA: Recv ZSGSRD 35275
17-03-18 03:16:29.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:29.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:29.994 -07 000000462 INF: FPGA: Recv ZSGSRD 35283
17-03-18 03:16:30.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:30.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:30.004 -07 000000461 INF: FPGA: Recv ZSGSRD 35279
17-03-18 03:16:30.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:30.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:30.014 -07 000000590 INF: FPGA: Recv ZSGSRD 35279
17-03-18 03:16:30.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:16:30.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:30.024 -07 000000430 INF: FPGA: Recv ZSGSRD 35283
17-03-18 03:16:30.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:30.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:30.034 -07 000000467 INF: FPGA: Recv ZSGSRD 35283
17-03-18 03:16:30.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:30.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:30.044 -07 000000629 INF: FPGA: Recv ZSGSRD 35278
17-03-18 03:16:30.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:30.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:30.054 -07 000000576 INF: FPGA: Recv ZSGSRD 35281
17-03-18 03:16:30.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:30.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:30.064 -07 000000424 INF: FPGA: Recv ZSGSRD 35279
17-03-18 03:16:30.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:30.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:30.074 -07 000000626 INF: FPGA: Recv ZSGSRD 35286
17-03-18 03:16:30.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:30.084 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:30.084 -07 000000590 INF: FPGA: Recv ZPIEZORD 31015
17-03-18 03:16:30.094 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:30.094 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.565 V. Piezo Error = -9.4 V.
17-03-18 03:16:30.094 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35281 (-166.1 uncal um), Error = 0.9 uncal um, Median = 35280 (-166.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35275 (-166.1 uncal um), Max = 35286 (-166.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:16:30.094 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35281, posNoise = 5, negNoise = 6
17-03-18 03:16:30.094 -07 000000610 INF: Z Motor: After move to -0.166963, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:30.094 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:16:30.094 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:30.094 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:30.094 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:30.094 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:30.094 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:30.094 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:30.094 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:30.094 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:30.094 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:30.094 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:30.094 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:30.094 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:30.094 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:16:30.104 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:30.104 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:16:30.104 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:30.114 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 03:16:30.114 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 03:16:30.114 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 03:16:30.114 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:16:30.114 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 36650 150\n [Camera]
17-03-18 03:16:30.314 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:30.714 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:30.714 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:30.714 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:30.714 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:30.714 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) start.
17-03-18 03:16:30.724 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:30.724 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:30.724 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:30.864 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:30.864 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 575712736, 0x0, 418435064) start.
17-03-18 03:16:30.914 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36650 788
17-03-18 03:16:31.064 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:31.114 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 03:16:31.114 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:16:31.114 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:31.114 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:31.114 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:16:31.234 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 575712736, 0x0, 418435064) end. Duration was 367 ms.
17-03-18 03:16:31.234 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 367 ms.
17-03-18 03:16:31.234 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:31.234 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:31.244 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 523 ms.
17-03-18 03:16:31.254 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:31.254 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:31.254 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:31.254 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:31.254 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:31.254 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:31.264 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:31.264 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:16:31.264 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:31.264 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:16:31.284 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.000345,
17-03-18 03:16:31.444 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:16:31.444 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:31.444 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 36650 150' command took 2 ms to send, 1327 ms to get response, and 1331 ms overall
17-03-18 03:16:31.444 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.167372
17-03-18 03:16:31.444 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.16737 mm
17-03-18 03:16:31.444 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:31.454 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:16:31.454 -07 000000462 INF: Y Motor: Moving to 72.3626 mm, started at 71.5181 mm, delta = 0.8445 mm
17-03-18 03:16:31.454 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:31.454 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 36562, sync = True, waitForSettling = False)
17-03-18 03:16:31.454 -07 000000461 INF: Z Motor: Moving to -0.167370 mm, started at -0.166976 mm, distance = -0.39 um
17-03-18 03:16:31.454 -07 000000626 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:16:31.464 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:16:31.464 -07 000000462 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:31.464 -07 000000462 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:31.464 -07 000000462 INF: Y Motor: Moving 1351 steps-30
17-03-18 03:16:31.464 -07 000000461 INF: FPGA: Xmit ZDACW 36562\n [Z Motor]
17-03-18 03:16:31.464 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:16:31.474 -07 000000461 INF: FPGA: 'ZDACW 36562' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:16:31.474 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:31.474 -07 000000561 INF: FPGA: Recv ZDACR 36562
17-03-18 03:16:31.484 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:31.484 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:31.484 -07 000000461 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 03:16:31.554 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:31.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:31.634 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:16:31.634 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:16:31.634 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:31.644 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:31.644 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:16:31.644 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:16:31.644 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:16:31.644 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:31.644 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:31.654 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:16:31.854 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:16:31.854 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 398 ms overall
17-03-18 03:16:31.904 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:31.914 -07 000000569 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:16:31.914 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:16:31.914 -07 000000462 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:31.914 -07 000000462 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:16:31.914 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.845 mm, average velocity = 2.122 mm/sec
17-03-18 03:16:32.864 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:32.864 -07 000000455 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:16:32.874 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:32.874 -07 000000462 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:32.894 -07 000000462 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:32.894 -07 000000462 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:16:32.894 -07 000000462 INF: Y Motor: Moved to 72.3491 after 1445 ms (table move)
17-03-18 03:16:32.904 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167370 mm (DAC = 36562)
17-03-18 03:16:32.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:32.904 -07 000000591 INF: FPGA: Recv ZSGSRD 35345
17-03-18 03:16:32.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:16:32.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:32.914 -07 000000467 INF: FPGA: Recv ZSGSRD 35339
17-03-18 03:16:32.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:32.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:32.924 -07 000000590 INF: FPGA: Recv ZSGSRD 35346
17-03-18 03:16:32.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:32.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:32.934 -07 000000444 INF: FPGA: Recv ZSGSRD 35345
17-03-18 03:16:32.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:32.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:32.944 -07 000000462 INF: FPGA: Recv ZSGSRD 35341
17-03-18 03:16:32.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:32.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:32.954 -07 000000591 INF: FPGA: Recv ZSGSRD 35344
17-03-18 03:16:32.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:32.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:32.964 -07 000000467 INF: FPGA: Recv ZSGSRD 35338
17-03-18 03:16:32.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:32.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:32.974 -07 000000626 INF: FPGA: Recv ZSGSRD 35343
17-03-18 03:16:32.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:32.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:32.984 -07 000000579 INF: FPGA: Recv ZSGSRD 35350
17-03-18 03:16:32.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:32.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:32.994 -07 000000629 INF: FPGA: Recv ZSGSRD 35344
17-03-18 03:16:33.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.004 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:33.004 -07 000000561 INF: FPGA: Recv ZPIEZORD 31122
17-03-18 03:16:33.014 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.014 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.579 V. Piezo Error = -9.3 V.
17-03-18 03:16:33.014 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.4 um, Read 10 ADC samples: Avg = 35344 (-166.5 uncal um), Error = 0.9 uncal um, Median = 35344 (-166.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35338 (-166.5 uncal um), Max = 35350 (-166.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:16:33.014 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35344, posNoise = 6, negNoise = 6
17-03-18 03:16:33.014 -07 000000610 INF: Z Motor: After move to -0.167370, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:33.014 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 109 ms (allowed 150 ms), total time = 1554 ms
17-03-18 03:16:33.014 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:33.064 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1610 ms
17-03-18 03:16:33.064 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:33.064 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.167380705949534. ----------
17-03-18 03:16:33.064 -07 000000610 INF: Cycle	110	Tile	16	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:33.064 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36386, sync = True, waitForSettling = True)
17-03-18 03:16:33.064 -07 000000610 INF: Z Motor: Moving to -0.166564 mm, started at -0.167381 mm, distance = 0.82 um
17-03-18 03:16:33.064 -07 000000610 INF: FPGA: Xmit ZDACW 36386\n [Z Motor]
17-03-18 03:16:33.064 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:16:33.074 -07 000000610 INF: FPGA: 'ZDACW 36386' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:16:33.074 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:33.074 -07 000000424 INF: FPGA: Recv ZDACR 36386
17-03-18 03:16:33.084 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.084 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:33.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:33.234 -07 000000455 INF: FPGA: Recv ZSGSRD 35222
17-03-18 03:16:33.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:33.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:33.244 -07 000000579 INF: FPGA: Recv ZSGSRD 35220
17-03-18 03:16:33.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:33.254 -07 000000606 INF: FPGA: Recv ZSGSRD 35218
17-03-18 03:16:33.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:33.264 -07 000000461 INF: FPGA: Recv ZSGSRD 35220
17-03-18 03:16:33.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:33.274 -07 000000424 INF: FPGA: Recv ZSGSRD 35220
17-03-18 03:16:33.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:33.284 -07 000000576 INF: FPGA: Recv ZSGSRD 35224
17-03-18 03:16:33.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:33.294 -07 000000579 INF: FPGA: Recv ZSGSRD 35218
17-03-18 03:16:33.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:33.304 -07 000000502 INF: FPGA: Recv ZSGSRD 35223
17-03-18 03:16:33.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:33.314 -07 000000512 INF: FPGA: Recv ZSGSRD 35225
17-03-18 03:16:33.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:33.324 -07 000000618 INF: FPGA: Recv ZSGSRD 35214
17-03-18 03:16:33.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.334 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:33.334 -07 000000455 INF: FPGA: Recv ZPIEZORD 30930
17-03-18 03:16:33.344 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:33.344 -07 000000610 INF: Z Motor: Piezo is near 46.1 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.552 V. Piezo Error = -9.4 V.
17-03-18 03:16:33.344 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.6 um, Read 10 ADC samples: Avg = 35220 (-165.7 uncal um), Error = 0.8 uncal um, Median = 35220 (-165.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35214 (-165.7 uncal um), Max = 35225 (-165.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:16:33.344 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35220, posNoise = 5, negNoise = 6
17-03-18 03:16:33.344 -07 000000610 INF: Z Motor: After move to -0.166564, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:33.344 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:16:33.344 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:33.344 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:33.344 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:33.344 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:33.344 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:33.344 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:33.344 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:33.344 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:33.344 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:33.344 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:33.344 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:33.344 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:33.354 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:16:33.354 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:33.354 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:16:33.354 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:33.364 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:16:33.364 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:16:33.364 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:16:33.364 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:16:33.374 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 36562 150\n [Camera]
17-03-18 03:16:33.574 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:33.974 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:33.974 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:33.974 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:33.974 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:33.974 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:33.974 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:34.094 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:34.094 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:16:34.104 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:34.104 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 575712736, 0x0, 418435064) start.
17-03-18 03:16:34.164 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36562 788
17-03-18 03:16:34.314 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:34.474 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 575712736, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:16:34.474 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:16:34.474 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:34.474 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 374 ms.
17-03-18 03:16:34.474 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:16:34.474 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:34.474 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:34.474 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:34.474 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 502 ms.
17-03-18 03:16:34.484 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 505 ms.
17-03-18 03:16:34.514 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:34.514 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:34.514 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:34.514 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:34.514 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:34.514 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:34.514 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:34.514 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:16:34.524 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:34.524 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:16:34.704 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:16:34.704 -07 000000629 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:34.704 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 36562 150' command took 2 ms to send, 1322 ms to get response, and 1331 ms overall
17-03-18 03:16:34.704 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:16:34.704 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.34912109375, Z-Position -0.166584103643956. ------
17-03-18 03:16:34.704 -07 000000576 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.17307 mm
17-03-18 03:16:34.704 -07 000000576 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:34.704 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:16:34.714 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:16:34.714 -07 000000501 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm
17-03-18 03:16:34.714 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 37807, sync = True, waitForSettling = False)
17-03-18 03:16:34.714 -07 000000430 INF: Z Motor: Moving to -0.173069 mm, started at -0.166584 mm, distance = -6.49 um
17-03-18 03:16:34.714 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:16:34.724 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 2 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:16:34.724 -07 000000430 INF: FPGA: Xmit ZDACW 37807\n [Z Motor]
17-03-18 03:16:34.724 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:16:34.734 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:34.734 -07 000000430 INF: FPGA: 'ZDACW 37807' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:16:34.734 -07 000000606 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:16:34.744 -07 000000579 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:16:34.744 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:16:34.744 -07 000000501 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:34.744 -07 000000501 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:34.744 -07 000000501 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:16:34.754 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:34.754 -07 000000512 INF: FPGA: Recv ZDACR 37807
17-03-18 03:16:34.764 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:34.764 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:16:34.764 -07 000000430 INF: Z Motor: MoveAbsStepped took 46 ms (did NOT wait for settling yet))
17-03-18 03:16:34.894 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:16:34.894 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:16:34.894 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:34.894 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:16:34.894 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:16:34.894 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:34.894 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:34.894 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:16:34.894 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:34.904 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:16:34.944 -07 000000561 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:16:34.944 -07 000000579 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:16:35.134 -07 000000430 INF: FPGA: Recv YMVTILE
17-03-18 03:16:35.134 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:16:35.204 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:35.204 -07 000000461 INF: FPGA: Recv YRDPOS 149863
17-03-18 03:16:35.214 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:16:35.214 -07 000000501 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:35.214 -07 000000501 INF: Y Motor: Position error before settling (table move) = -35 encoder counts (-0.017 mm)
17-03-18 03:16:35.214 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.843 mm, average velocity = 2.119 mm/sec
17-03-18 03:16:36.164 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:36.164 -07 000000569 INF: FPGA: Recv YRDPOS 149863
17-03-18 03:16:36.174 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:36.174 -07 000000501 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:36.194 -07 000000501 INF: Y Motor: After move to 73.192604, error = -0.017311, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:36.194 -07 000000501 INF: Y Motor: Position error after settling (table move) = -35 encoder counts (-0.017 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:16:36.194 -07 000000501 INF: Y Motor: Moved to 73.1753 after 1484 ms (table move)
17-03-18 03:16:36.204 -07 000000576 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173069 mm (DAC = 37807)
17-03-18 03:16:36.204 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:36.204 -07 000000618 INF: FPGA: Recv ZSGSRD 36233
17-03-18 03:16:36.214 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:16:36.214 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:36.214 -07 000000579 INF: FPGA: Recv ZSGSRD 36232
17-03-18 03:16:36.224 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:36.224 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:36.224 -07 000000569 INF: FPGA: Recv ZSGSRD 36235
17-03-18 03:16:36.234 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:36.234 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:36.234 -07 000000561 INF: FPGA: Recv ZSGSRD 36230
17-03-18 03:16:36.244 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:36.244 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:36.244 -07 000000606 INF: FPGA: Recv ZSGSRD 36224
17-03-18 03:16:36.254 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:36.254 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:36.254 -07 000000626 INF: FPGA: Recv ZSGSRD 36232
17-03-18 03:16:36.264 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:36.264 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:36.264 -07 000000455 INF: FPGA: Recv ZSGSRD 36224
17-03-18 03:16:36.274 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:36.274 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:36.274 -07 000000502 INF: FPGA: Recv ZSGSRD 36234
17-03-18 03:16:36.284 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:36.284 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:36.284 -07 000000590 INF: FPGA: Recv ZSGSRD 36232
17-03-18 03:16:36.294 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:36.294 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:36.294 -07 000000606 INF: FPGA: Recv ZSGSRD 36234
17-03-18 03:16:36.304 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:36.304 -07 000000576 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:36.304 -07 000000462 INF: FPGA: Recv ZPIEZORD 32321
17-03-18 03:16:36.314 -07 000000576 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:36.314 -07 000000576 INF: Z Motor: Piezo is near 49.0 V (nominally 0 to 100 V), expect near 57.7 V, since DAC is at 5.769 V. Piezo Error = -8.6 V.
17-03-18 03:16:36.314 -07 000000576 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.1 um, Read 10 ADC samples: Avg = 36231 (-172.2 uncal um), Error = 0.9 uncal um, Median = 36232 (-172.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36224 (-172.2 uncal um), Max = 36235 (-172.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:16:36.314 -07 000000576 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36231, posNoise = 4, negNoise = 7
17-03-18 03:16:36.314 -07 000000576 INF: Z Motor: After move to -0.173069, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:36.314 -07 000000576 INF: Z Motor: Settle wait time = 1489 ms, measure time = 107 ms (allowed 150 ms), total time = 1596 ms
17-03-18 03:16:36.314 -07 000000576 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:36.364 -07 000000576 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1651 ms
17-03-18 03:16:36.364 -07 000000576 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:36.364 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:36.364 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:36.364 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:36.364 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:36.364 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:16:36.364 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:36.364 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:36.364 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:16:36.374 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:16:36.374 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:16:36.384 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 03:16:36.384 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-18 03:16:36.384 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:16:36.434 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 42
17-03-18 03:16:36.554 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:36.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:36.644 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.958108,
17-03-18 03:16:36.734 -07 000000579 INF: FPGA: Recv @CAMSNAP img rdy 342
17-03-18 03:16:36.734 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 342
17-03-18 03:16:36.734 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:16:36.734 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611135000, 0x0, 559484976) start.
17-03-18 03:16:36.764 -07 000000561 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:16:36.764 -07 000000629 INF: FPGA: Recv CAMSNAP
17-03-18 03:16:36.764 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 379 ms to get response, and 385 ms overall
17-03-18 03:16:36.854 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611135000, 0x0, 559484976) end. Duration was 118 ms.
17-03-18 03:16:36.854 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:36.854 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:16:36.854 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 121 ms.
17-03-18 03:16:36.874 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:16:36.874 -07 000000462 INF: Autofocus start
17-03-18 03:16:36.874 -07 000000462 INF: MeasureProfile start
17-03-18 03:16:36.874 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:16:36.884 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:16:36.884 -07 000000579 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:16:36.884 -07 000000462 INF: MeasureProfile done
17-03-18 03:16:36.884 -07 000000462 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:16:36.884 -07 000000462 INF: Autofocus finished
17-03-18 03:16:37.084 -07 000000576 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:16:37.084 -07 000000579 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:16:37.084 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17529296875, Z-position -0.173078982119276. ----------
17-03-18 03:16:37.084 -07 000000610 INF: Cycle	110	Tile	17	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:37.094 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36322, sync = True, waitForSettling = True)
17-03-18 03:16:37.094 -07 000000610 INF: Z Motor: Moving to -0.166271 mm, started at -0.173079 mm, distance = 6.81 um
17-03-18 03:16:37.094 -07 000000610 INF: FPGA: Xmit ZDACW 36322\n [Z Motor]
17-03-18 03:16:37.094 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:16:37.104 -07 000000610 INF: FPGA: 'ZDACW 36322' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:16:37.104 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:37.104 -07 000000606 INF: FPGA: Recv ZDACR 36322
17-03-18 03:16:37.114 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:37.114 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:37.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:37.264 -07 000000576 INF: FPGA: Recv ZSGSRD 35179
17-03-18 03:16:37.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:37.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:37.274 -07 000000561 INF: FPGA: Recv ZSGSRD 35169
17-03-18 03:16:37.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:37.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:37.284 -07 000000462 INF: FPGA: Recv ZSGSRD 35173
17-03-18 03:16:37.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:37.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:37.294 -07 000000424 INF: FPGA: Recv ZSGSRD 35169
17-03-18 03:16:37.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:37.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:37.304 -07 000000461 INF: FPGA: Recv ZSGSRD 35172
17-03-18 03:16:37.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:37.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:37.314 -07 000000467 INF: FPGA: Recv ZSGSRD 35177
17-03-18 03:16:37.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:37.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:37.324 -07 000000606 INF: FPGA: Recv ZSGSRD 35171
17-03-18 03:16:37.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:37.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:37.334 -07 000000579 INF: FPGA: Recv ZSGSRD 35172
17-03-18 03:16:37.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:37.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:37.344 -07 000000501 INF: FPGA: Recv ZSGSRD 35175
17-03-18 03:16:37.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:37.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:37.354 -07 000000591 INF: FPGA: Recv ZSGSRD 35172
17-03-18 03:16:37.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:37.364 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:37.364 -07 000000444 INF: FPGA: Recv ZPIEZORD 30921
17-03-18 03:16:37.374 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:37.374 -07 000000610 INF: Z Motor: Piezo is near 46.1 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.542 V. Piezo Error = -9.4 V.
17-03-18 03:16:37.374 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.3 um, Read 10 ADC samples: Avg = 35173 (-165.4 uncal um), Error = 0.9 uncal um, Median = 35172 (-165.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35169 (-165.4 uncal um), Max = 35179 (-165.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:16:37.374 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35173, posNoise = 6, negNoise = 4
17-03-18 03:16:37.374 -07 000000610 INF: Z Motor: After move to -0.166271, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:37.374 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:16:37.374 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:37.374 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:37.374 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:37.374 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:37.374 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:37.374 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:37.374 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:37.374 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:37.374 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:37.374 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:37.374 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:37.374 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:37.384 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:16:37.384 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:37.384 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:16:37.384 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:37.394 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:16:37.394 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:16:37.394 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:16:37.394 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:16:37.394 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 36499 150\n [Camera]
17-03-18 03:16:37.594 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:37.994 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:37.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:37.994 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:38.004 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:38.004 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:38.004 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:38.004 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:38.004 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:16:38.004 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:38.004 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 03:16:38.184 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36499 788
17-03-18 03:16:38.344 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:16:38.374 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:16:38.374 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:16:38.374 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:38.384 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:38.384 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:16:38.384 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:16:38.384 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:38.384 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:38.384 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:16:38.384 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:16:38.534 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:38.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:38.534 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:38.534 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:38.534 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) start.
17-03-18 03:16:38.534 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:38.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:38.544 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:38.544 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:38.544 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:16:38.724 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:16:38.724 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:38.724 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 36499 150' command took 2 ms to send, 1326 ms to get response, and 1332 ms overall
17-03-18 03:16:38.724 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166711
17-03-18 03:16:38.724 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16671 mm
17-03-18 03:16:38.724 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:38.734 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:16:38.734 -07 000000462 INF: Y Motor: Moving to 74.0226 mm, started at 73.1753 mm, delta = 0.8473 mm
17-03-18 03:16:38.734 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:38.734 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 36418, sync = True, waitForSettling = False)
17-03-18 03:16:38.734 -07 000000591 INF: Z Motor: Moving to -0.166711 mm, started at -0.166282 mm, distance = -0.43 um
17-03-18 03:16:38.734 -07 000000606 INF: FPGA: Recv YRDPOS 149864
17-03-18 03:16:38.744 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:16:38.744 -07 000000462 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:38.744 -07 000000591 INF: FPGA: Xmit ZDACW 36418\n [Z Motor]
17-03-18 03:16:38.744 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:16:38.744 -07 000000462 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:38.744 -07 000000462 INF: Y Motor: Moving 1355 steps-35
17-03-18 03:16:38.754 -07 000000591 INF: FPGA: 'ZDACW 36418' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:16:38.754 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:38.764 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:38.764 -07 000000512 INF: FPGA: Recv ZDACR 36418
17-03-18 03:16:38.774 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:16:38.774 -07 000000591 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:16:38.924 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:16:38.924 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:16:38.924 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:38.924 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 03:16:38.924 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:16:38.924 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:38.934 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:38.934 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:16:38.934 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:16:38.934 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:16:39.134 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-18 03:16:39.134 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 386 ms overall
17-03-18 03:16:39.164 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:39.174 -07 000000561 INF: FPGA: Recv YRDPOS 151567
17-03-18 03:16:39.174 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:16:39.174 -07 000000462 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:39.174 -07 000000462 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:16:39.174 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.847 mm, average velocity = 2.195 mm/sec
17-03-18 03:16:40.124 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:40.124 -07 000000502 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:16:40.134 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:40.134 -07 000000462 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:40.154 -07 000000462 INF: Y Motor: After move to 74.022606, error = -0.014793, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:40.154 -07 000000462 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:16:40.154 -07 000000462 INF: Y Motor: Moved to 74.0078 after 1419 ms (table move)
17-03-18 03:16:40.154 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166711 mm (DAC = 36418)
17-03-18 03:16:40.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.154 -07 000000455 INF: FPGA: Recv ZSGSRD 35236
17-03-18 03:16:40.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:16:40.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.164 -07 000000561 INF: FPGA: Recv ZSGSRD 35240
17-03-18 03:16:40.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.174 -07 000000569 INF: FPGA: Recv ZSGSRD 35242
17-03-18 03:16:40.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.184 -07 000000502 INF: FPGA: Recv ZSGSRD 35247
17-03-18 03:16:40.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.194 -07 000000462 INF: FPGA: Recv ZSGSRD 35245
17-03-18 03:16:40.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.204 -07 000000424 INF: FPGA: Recv ZSGSRD 35236
17-03-18 03:16:40.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.214 -07 000000591 INF: FPGA: Recv ZSGSRD 35247
17-03-18 03:16:40.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.224 -07 000000579 INF: FPGA: Recv ZSGSRD 35237
17-03-18 03:16:40.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.234 -07 000000467 INF: FPGA: Recv ZSGSRD 35241
17-03-18 03:16:40.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.244 -07 000000579 INF: FPGA: Recv ZSGSRD 35234
17-03-18 03:16:40.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.254 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:40.254 -07 000000467 INF: FPGA: Recv ZPIEZORD 31027
17-03-18 03:16:40.264 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.264 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.557 V. Piezo Error = -9.3 V.
17-03-18 03:16:40.264 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.7 um, Read 10 ADC samples: Avg = 35240 (-165.8 uncal um), Error = 0.9 uncal um, Median = 35240 (-165.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35234 (-165.8 uncal um), Max = 35247 (-165.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:16:40.264 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35240, posNoise = 7, negNoise = 6
17-03-18 03:16:40.264 -07 000000610 INF: Z Motor: After move to -0.166711, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:40.264 -07 000000610 INF: Z Motor: Settle wait time = 1421 ms, measure time = 106 ms (allowed 150 ms), total time = 1527 ms
17-03-18 03:16:40.264 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:40.314 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1581 ms
17-03-18 03:16:40.314 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:40.314 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0078125, Z-position -0.166712587886791. ----------
17-03-18 03:16:40.314 -07 000000610 INF: Cycle	110	Tile	18	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:40.314 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36241, sync = True, waitForSettling = True)
17-03-18 03:16:40.314 -07 000000610 INF: Z Motor: Moving to -0.165901 mm, started at -0.166713 mm, distance = 0.81 um
17-03-18 03:16:40.314 -07 000000610 INF: FPGA: Xmit ZDACW 36241\n [Z Motor]
17-03-18 03:16:40.314 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:16:40.324 -07 000000610 INF: FPGA: 'ZDACW 36241' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:16:40.324 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:40.324 -07 000000569 INF: FPGA: Recv ZDACR 36241
17-03-18 03:16:40.334 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.334 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:40.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.484 -07 000000467 INF: FPGA: Recv ZSGSRD 35114
17-03-18 03:16:40.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.494 -07 000000591 INF: FPGA: Recv ZSGSRD 35115
17-03-18 03:16:40.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.504 -07 000000590 INF: FPGA: Recv ZSGSRD 35122
17-03-18 03:16:40.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.514 -07 000000430 INF: FPGA: Recv ZSGSRD 35113
17-03-18 03:16:40.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.524 -07 000000444 INF: FPGA: Recv ZSGSRD 35117
17-03-18 03:16:40.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.534 -07 000000455 INF: FPGA: Recv ZSGSRD 35117
17-03-18 03:16:40.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.544 -07 000000618 INF: FPGA: Recv ZSGSRD 35120
17-03-18 03:16:40.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.554 -07 000000512 INF: FPGA: Recv ZSGSRD 35115
17-03-18 03:16:40.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.564 -07 000000430 INF: FPGA: Recv ZSGSRD 35109
17-03-18 03:16:40.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:40.574 -07 000000579 INF: FPGA: Recv ZSGSRD 35118
17-03-18 03:16:40.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.584 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:40.584 -07 000000467 INF: FPGA: Recv ZPIEZORD 30846
17-03-18 03:16:40.594 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:40.594 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.530 V. Piezo Error = -9.4 V.
17-03-18 03:16:40.594 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.9 um, Read 10 ADC samples: Avg = 35116 (-165.1 uncal um), Error = 0.8 uncal um, Median = 35116 (-165.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35109 (-165.0 uncal um), Max = 35122 (-165.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:16:40.594 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35116, posNoise = 6, negNoise = 7
17-03-18 03:16:40.594 -07 000000610 INF: Z Motor: After move to -0.165901, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:40.594 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:16:40.594 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:40.594 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:40.594 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:40.594 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:40.594 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:40.594 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:40.594 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:40.594 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:40.594 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:16:40.594 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:40.594 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:40.594 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:40.604 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:16:40.604 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:40.604 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:16:40.604 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:40.614 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:16:40.614 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:16:40.614 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:16:40.614 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:16:40.614 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 36418 150\n [Camera]
17-03-18 03:16:40.814 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:41.214 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:41.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:41.214 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:41.214 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:41.214 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:16:41.214 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:41.214 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:41.214 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:41.214 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:41.214 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:16:41.404 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36418 788
17-03-18 03:16:41.554 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:41.564 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:41.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:41.594 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:16:41.594 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:16:41.594 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:41.714 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 499 ms.
17-03-18 03:16:41.714 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 500 ms.
17-03-18 03:16:41.714 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:41.724 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 128 ms.
17-03-18 03:16:41.724 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:41.724 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 505 ms.
17-03-18 03:16:41.724 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 509 ms.
17-03-18 03:16:41.754 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:41.754 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:41.754 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:41.754 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:41.754 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:41.754 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:41.754 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:41.754 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) start.
17-03-18 03:16:41.764 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:41.764 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:16:41.944 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:16:41.944 -07 000000461 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:41.944 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 36418 150' command took 2 ms to send, 1324 ms to get response, and 1331 ms overall
17-03-18 03:16:41.944 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.165745
17-03-18 03:16:41.944 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16574 mm
17-03-18 03:16:41.944 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:41.944 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 36207, sync = True, waitForSettling = False)
17-03-18 03:16:41.944 -07 000000590 INF: Z Motor: Moving to -0.165745 mm, started at -0.165916 mm, distance = 0.17 um
17-03-18 03:16:41.944 -07 000000590 INF: FPGA: Xmit ZDACW 36207\n [Z Motor]
17-03-18 03:16:41.954 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:16:41.954 -07 000000579 INF: Y Motor: Moving to 74.8526 mm, started at 74.0078 mm, delta = 0.8448 mm
17-03-18 03:16:41.954 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:41.954 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:16:41.954 -07 000000590 INF: FPGA: 'ZDACW 36207' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:16:41.954 -07 000000512 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:16:41.964 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:41.964 -07 000000579 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:41.964 -07 000000579 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:41.964 -07 000000579 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:16:41.964 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:41.964 -07 000000455 INF: FPGA: Recv ZDACR 36207
17-03-18 03:16:41.974 -07 000000590 INF: FPGA: 'ZDACR' command took 3 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:16:41.974 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:41.974 -07 000000590 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 03:16:42.034 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.96762,
17-03-18 03:16:42.144 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:16:42.144 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:16:42.144 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:42.144 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:16:42.144 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:16:42.144 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:42.144 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:42.144 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:42.144 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:16:42.154 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:16:42.344 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:16:42.344 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 03:16:42.374 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:42.384 -07 000000618 INF: FPGA: Recv YRDPOS 153254
17-03-18 03:16:42.384 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:16:42.384 -07 000000579 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:42.384 -07 000000579 INF: Y Motor: Position error before settling (table move) = -44 encoder counts (-0.021 mm)
17-03-18 03:16:42.384 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.845 mm, average velocity = 2.194 mm/sec
17-03-18 03:16:43.334 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:43.334 -07 000000430 INF: FPGA: Recv YRDPOS 153254
17-03-18 03:16:43.344 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:43.344 -07 000000579 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:43.354 -07 000000579 INF: Y Motor: After move to 74.852608, error = -0.021553, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:43.354 -07 000000579 INF: Y Motor: Position error after settling (table move) = -44 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:16:43.354 -07 000000579 INF: Y Motor: Moved to 74.8311 after 1409 ms (table move)
17-03-18 03:16:43.364 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.165745 mm (DAC = 36207)
17-03-18 03:16:43.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.364 -07 000000424 INF: FPGA: Recv ZSGSRD 35095
17-03-18 03:16:43.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:16:43.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.374 -07 000000576 INF: FPGA: Recv ZSGSRD 35083
17-03-18 03:16:43.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.384 -07 000000561 INF: FPGA: Recv ZSGSRD 35088
17-03-18 03:16:43.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.394 -07 000000618 INF: FPGA: Recv ZSGSRD 35089
17-03-18 03:16:43.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.404 -07 000000455 INF: FPGA: Recv ZSGSRD 35092
17-03-18 03:16:43.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.414 -07 000000569 INF: FPGA: Recv ZSGSRD 35099
17-03-18 03:16:43.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.424 -07 000000444 INF: FPGA: Recv ZSGSRD 35095
17-03-18 03:16:43.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.434 -07 000000591 INF: FPGA: Recv ZSGSRD 35089
17-03-18 03:16:43.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.444 -07 000000462 INF: FPGA: Recv ZSGSRD 35091
17-03-18 03:16:43.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.454 -07 000000629 INF: FPGA: Recv ZSGSRD 35088
17-03-18 03:16:43.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.464 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:43.464 -07 000000606 INF: FPGA: Recv ZPIEZORD 30820
17-03-18 03:16:43.474 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.474 -07 000000610 INF: Z Motor: Piezo is near 45.8 V (nominally 0 to 100 V), expect near 55.2 V, since DAC is at 5.525 V. Piezo Error = -9.4 V.
17-03-18 03:16:43.474 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.7 um, Read 10 ADC samples: Avg = 35091 (-164.9 uncal um), Error = 0.9 uncal um, Median = 35090 (-164.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35083 (-164.8 uncal um), Max = 35099 (-164.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:16:43.474 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35091, posNoise = 8, negNoise = 8
17-03-18 03:16:43.474 -07 000000610 INF: Z Motor: After move to -0.165745, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:43.474 -07 000000610 INF: Z Motor: Settle wait time = 1412 ms, measure time = 109 ms (allowed 150 ms), total time = 1521 ms
17-03-18 03:16:43.474 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:43.524 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1573 ms
17-03-18 03:16:43.524 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:43.524 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.8310546875, Z-position -0.165755380277669. ----------
17-03-18 03:16:43.524 -07 000000610 INF: Cycle	110	Tile	19	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:43.524 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36030, sync = True, waitForSettling = True)
17-03-18 03:16:43.524 -07 000000610 INF: Z Motor: Moving to -0.164935 mm, started at -0.165755 mm, distance = 0.82 um
17-03-18 03:16:43.524 -07 000000610 INF: FPGA: Xmit ZDACW 36030\n [Z Motor]
17-03-18 03:16:43.534 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:16:43.534 -07 000000610 INF: FPGA: 'ZDACW 36030' command took 0 ms to send, 2 ms to get response, and 5 ms overall
17-03-18 03:16:43.534 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:43.534 -07 000000591 INF: FPGA: Recv ZDACR 36030
17-03-18 03:16:43.544 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:16:43.544 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:43.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.694 -07 000000626 INF: FPGA: Recv ZSGSRD 34963
17-03-18 03:16:43.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:43.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.704 -07 000000629 INF: FPGA: Recv ZSGSRD 34967
17-03-18 03:16:43.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.714 -07 000000569 INF: FPGA: Recv ZSGSRD 34965
17-03-18 03:16:43.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.724 -07 000000502 INF: FPGA: Recv ZSGSRD 34967
17-03-18 03:16:43.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.734 -07 000000561 INF: FPGA: Recv ZSGSRD 34968
17-03-18 03:16:43.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.744 -07 000000618 INF: FPGA: Recv ZSGSRD 34971
17-03-18 03:16:43.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.754 -07 000000455 INF: FPGA: Recv ZSGSRD 34967
17-03-18 03:16:43.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.764 -07 000000512 INF: FPGA: Recv ZSGSRD 34965
17-03-18 03:16:43.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.774 -07 000000444 INF: FPGA: Recv ZSGSRD 34964
17-03-18 03:16:43.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:43.784 -07 000000591 INF: FPGA: Recv ZSGSRD 34964
17-03-18 03:16:43.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.794 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:43.794 -07 000000626 INF: FPGA: Recv ZPIEZORD 30629
17-03-18 03:16:43.804 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:43.804 -07 000000610 INF: Z Motor: Piezo is near 45.4 V (nominally 0 to 100 V), expect near 55.0 V, since DAC is at 5.498 V. Piezo Error = -9.5 V.
17-03-18 03:16:43.804 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -164.9 um, Read 10 ADC samples: Avg = 34966 (-164.1 uncal um), Error = 0.8 uncal um, Median = 34966 (-164.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 34963 (-164.1 uncal um), Max = 34971 (-164.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:16:43.804 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34966, posNoise = 5, negNoise = 3
17-03-18 03:16:43.804 -07 000000610 INF: Z Motor: After move to -0.164935, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:43.804 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:16:43.804 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:43.804 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:43.804 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:43.804 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:43.804 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:43.804 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:43.804 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:43.804 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:43.804 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:43.804 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:43.804 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:43.804 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:43.804 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:16:43.814 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:43.814 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:16:43.814 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:43.824 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:16:43.824 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:16:43.824 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:16:43.824 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:16:43.824 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 36207 150\n [Camera]
17-03-18 03:16:44.024 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:44.434 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 598
17-03-18 03:16:44.434 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 598
17-03-18 03:16:44.434 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:44.434 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:44.434 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:16:44.434 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 598
17-03-18 03:16:44.434 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 598
17-03-18 03:16:44.444 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:44.444 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:44.444 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:16:44.624 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36207 788
17-03-18 03:16:44.774 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:44.834 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 398 ms.
17-03-18 03:16:44.834 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:16:44.834 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:44.844 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:44.844 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms.
17-03-18 03:16:44.844 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 397 ms.
17-03-18 03:16:44.844 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:16:44.844 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:44.854 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:16:44.864 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 419 ms.
17-03-18 03:16:44.964 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:44.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:44.974 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:44.974 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:44.974 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) start.
17-03-18 03:16:44.974 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:44.974 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:44.974 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:44.974 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:44.974 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:16:45.164 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:16:45.164 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:45.164 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 36207 150' command took 2 ms to send, 1321 ms to get response, and 1331 ms overall
17-03-18 03:16:45.344 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:16:45.344 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:16:45.344 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:45.344 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:45.354 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:16:45.354 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:16:45.354 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:45.354 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:45.354 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:16:45.354 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:16:45.354 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:16:45.394 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:16:45.394 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:16:45.434 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 03:16:45.434 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-18 03:16:45.434 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:16:45.444 -07 000000424 INF: FPGA: Recv EMCUR 
17-03-18 03:16:45.454 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:45.454 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-18 03:16:45.954 -07 000000626 INF: FPGA: Recv EMIN
17-03-18 03:16:45.954 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 03:16:45.954 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-18 03:16:45.954 -07 000000430 INF: FPGA: Recv EMCUR 
17-03-18 03:16:45.964 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:16:46.084 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:16:46.084 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.8310546875, Z-Position -0.164952353759949. ------
17-03-18 03:16:46.084 -07 000000576 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:16:46.084 -07 000000579 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13950 mm
17-03-18 03:16:46.084 -07 000000579 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:46.084 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:16:46.084 -07 000000626 INF: Y Motor: Moving to 59.9126 mm, started at 74.8311 mm, delta = -14.9184 mm
17-03-18 03:16:46.084 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 30475, sync = True, waitForSettling = False)
17-03-18 03:16:46.084 -07 000000512 INF: Z Motor: Moving to -0.139506 mm, started at -0.164952 mm, distance = 25.45 um
17-03-18 03:16:46.094 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:16:46.094 -07 000000512 INF: FPGA: Xmit ZDACW 30475\n [Z Motor]
17-03-18 03:16:46.094 -07 000000576 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:16:46.094 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:16:46.104 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:46.104 -07 000000512 INF: FPGA: 'ZDACW 30475' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:46.104 -07 000000591 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:16:46.114 -07 000000576 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:16:46.114 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 03:16:46.114 -07 000000626 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:46.124 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:46.124 -07 000000430 INF: FPGA: Recv ZDACR 30475
17-03-18 03:16:46.124 -07 000000626 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-18 03:16:46.124 -07 000000626 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:16:46.134 -07 000000626 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:16:46.134 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:16:46.134 -07 000000512 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-18 03:16:46.314 -07 000000618 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:16:46.314 -07 000000576 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall
17-03-18 03:16:46.554 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:46.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:47.394 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.952638,
17-03-18 03:16:47.754 -07 000000591 INF: FPGA: Recv YMVTO 122703 23903
17-03-18 03:16:47.754 -07 000000626 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1618 ms to get response, and 1630 ms overall
17-03-18 03:16:47.754 -07 000000626 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:16:47.754 -07 000000626 INF: Y Motor: To move from 74.832 to 59.913 (-14.918 mm) should take 23871 steps, but required 23903 steps (14.939 mm). Slippage = 0.020 mm (0.00%).
17-03-18 03:16:47.754 -07 000000626 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1631 ms, distance = 14.918 mm, average velocity = 9.147 mm/sec
17-03-18 03:16:50.604 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:50.604 -07 000000430 INF: FPGA: Recv YRDPOS 122698
17-03-18 03:16:50.614 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:50.614 -07 000000626 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:50.644 -07 000000626 INF: Y Motor: After move to 59.912609, error = -0.001476, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:50.644 -07 000000626 INF: Y Motor: Position error after settling = -3 encoder counts (-0.001 mm), Delta during settling = -5 counts (-0.002 mm)
17-03-18 03:16:50.644 -07 000000626 INF: Y Motor: Moved to 59.9111 after 4557 ms
17-03-18 03:16:50.654 -07 000000579 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139506 mm (DAC = 30475)
17-03-18 03:16:50.654 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:50.654 -07 000000455 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:16:50.664 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:16:50.664 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:50.664 -07 000000512 INF: FPGA: Recv ZSGSRD 31005
17-03-18 03:16:50.674 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:50.674 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:50.674 -07 000000591 INF: FPGA: Recv ZSGSRD 31003
17-03-18 03:16:50.684 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:50.684 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:50.684 -07 000000629 INF: FPGA: Recv ZSGSRD 31006
17-03-18 03:16:50.694 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:50.694 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:50.694 -07 000000626 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:16:50.704 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:50.704 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:50.704 -07 000000576 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:16:50.714 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:50.714 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:50.714 -07 000000444 INF: FPGA: Recv ZSGSRD 31003
17-03-18 03:16:50.724 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:50.724 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:50.724 -07 000000462 INF: FPGA: Recv ZSGSRD 31011
17-03-18 03:16:50.734 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:50.734 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:50.734 -07 000000629 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:16:50.744 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:50.744 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:50.744 -07 000000461 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:16:50.754 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:50.754 -07 000000579 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:50.754 -07 000000430 INF: FPGA: Recv ZPIEZORD 26448
17-03-18 03:16:50.764 -07 000000579 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:50.764 -07 000000579 INF: Z Motor: Piezo is near 36.5 V (nominally 0 to 100 V), expect near 46.5 V, since DAC is at 4.650 V. Piezo Error = -10.0 V.
17-03-18 03:16:50.764 -07 000000579 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.5 um, Read 10 ADC samples: Avg = 31007 (-138.7 uncal um), Error = 0.8 uncal um, Median = 31009 (-138.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 31003 (-138.7 uncal um), Max = 31011 (-138.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:16:50.764 -07 000000579 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31007, posNoise = 4, negNoise = 4
17-03-18 03:16:50.764 -07 000000579 INF: Z Motor: After move to -0.139506, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:50.764 -07 000000579 INF: Z Motor: Settle wait time = 4561 ms, measure time = 109 ms (allowed 150 ms), total time = 4670 ms
17-03-18 03:16:50.764 -07 000000579 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:50.814 -07 000000579 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4722 ms
17-03-18 03:16:50.814 -07 000000579 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:50.814 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:50.814 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:50.814 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:50.814 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:16:50.814 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:50.814 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:50.814 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:50.814 -07 000000461 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:16:50.844 -07 000000461 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 03:16:50.844 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:16:50.844 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:16:50.844 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:16:50.854 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms.
17-03-18 03:16:50.854 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 39 ms.
17-03-18 03:16:50.854 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:16:50.904 -07 000000561 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:16:51.204 -07 000000579 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:16:51.204 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:16:51.204 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:16:51.204 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 575712736, 0x0, 559484976) start.
17-03-18 03:16:51.244 -07 000000590 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:16:51.244 -07 000000502 INF: FPGA: Recv CAMSNAP
17-03-18 03:16:51.244 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 383 ms to get response, and 384 ms overall
17-03-18 03:16:51.324 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 575712736, 0x0, 559484976) end. Duration was 115 ms.
17-03-18 03:16:51.324 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:51.324 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:16:51.324 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-18 03:16:51.344 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:16:51.344 -07 000000424 INF: Image SNR check: start
17-03-18 03:16:51.344 -07 000000461 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:16:51.354 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:16:51.354 -07 000000579 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:16:51.364 -07 000000424 INF: Image SNR check: pass  [peak (Max-Min)=137.01]
17-03-18 03:16:51.364 -07 000000424 INF: Autofocus start
17-03-18 03:16:51.364 -07 000000424 INF: MeasureProfile start
17-03-18 03:16:51.374 -07 000000424 INF: MeasureProfile done
17-03-18 03:16:51.374 -07 000000424 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:16:51.374 -07 000000424 INF: Autofocus finished
17-03-18 03:16:51.554 -07 000000618 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:16:51.554 -07 000000579 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:16:51.554 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:51.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:51.564 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.9111328125, Z-position -0.139518897890717. ----------
17-03-18 03:16:51.564 -07 000000610 INF: Cycle	110	Tile	1	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:51.564 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28982, sync = True, waitForSettling = True)
17-03-18 03:16:51.564 -07 000000610 INF: Z Motor: Moving to -0.132671 mm, started at -0.139519 mm, distance = 6.85 um
17-03-18 03:16:51.564 -07 000000610 INF: FPGA: Xmit ZDACW 28982\n [Z Motor]
17-03-18 03:16:51.564 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:16:51.574 -07 000000610 INF: FPGA: 'ZDACW 28982' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:16:51.574 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:51.574 -07 000000461 INF: FPGA: Recv ZDACR 28982
17-03-18 03:16:51.584 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:51.584 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:51.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:51.734 -07 000000444 INF: FPGA: Recv ZSGSRD 29943
17-03-18 03:16:51.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:51.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:51.744 -07 000000467 INF: FPGA: Recv ZSGSRD 29940
17-03-18 03:16:51.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:51.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:51.754 -07 000000590 INF: FPGA: Recv ZSGSRD 29940
17-03-18 03:16:51.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:51.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:51.764 -07 000000629 INF: FPGA: Recv ZSGSRD 29940
17-03-18 03:16:51.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:51.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:51.774 -07 000000561 INF: FPGA: Recv ZSGSRD 29948
17-03-18 03:16:51.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:51.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:51.784 -07 000000576 INF: FPGA: Recv ZSGSRD 29939
17-03-18 03:16:51.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:51.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:51.794 -07 000000569 INF: FPGA: Recv ZSGSRD 29938
17-03-18 03:16:51.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:51.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:51.814 -07 000000618 INF: FPGA: Recv ZSGSRD 29945
17-03-18 03:16:51.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:16:51.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:51.824 -07 000000626 INF: FPGA: Recv ZSGSRD 29940
17-03-18 03:16:51.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:51.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:51.834 -07 000000461 INF: FPGA: Recv ZSGSRD 29935
17-03-18 03:16:51.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:51.844 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:51.844 -07 000000430 INF: FPGA: Recv ZPIEZORD 25360
17-03-18 03:16:51.854 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:51.854 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.422 V. Piezo Error = -10.0 V.
17-03-18 03:16:51.854 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29941 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29940 (-131.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29935 (-131.8 uncal um), Max = 29948 (-131.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:16:51.854 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29941, posNoise = 7, negNoise = 6
17-03-18 03:16:51.854 -07 000000610 INF: Z Motor: After move to -0.132671, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:51.854 -07 000000610 INF: Z Motor: MoveAbsStepped took 288 ms)
17-03-18 03:16:51.854 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:51.854 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:51.854 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:51.854 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:51.854 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:51.854 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:51.854 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:51.854 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:51.854 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:51.854 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:51.854 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:16:51.854 -07 000000579 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:16:51.854 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:16:51.854 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:51.864 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:16:51.864 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:16:51.874 -07 000000579 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-18 03:16:51.874 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:51.884 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:16:51.884 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:51.884 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:16:51.884 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 33 ms.
17-03-18 03:16:51.894 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 29159 150\n [Camera]
17-03-18 03:16:52.094 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:52.494 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:52.494 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:52.494 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:52.494 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:52.494 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:52.494 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:52.504 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:52.504 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 594794120, 0x0, 391868352) start.
17-03-18 03:16:52.504 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:52.504 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:16:52.684 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29159 788
17-03-18 03:16:52.754 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.981281,
17-03-18 03:16:52.834 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:52.874 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:16:52.874 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:16:52.874 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:52.874 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 594794120, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:16:52.874 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:16:52.874 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:52.884 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:52.884 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:52.884 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:16:52.884 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:16:53.034 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:53.034 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:53.034 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:53.034 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:53.034 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:53.034 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:53.034 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:53.034 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) start.
17-03-18 03:16:53.154 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:53.154 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:16:53.224 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:16:53.224 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:53.224 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 29159 150' command took 2 ms to send, 1324 ms to get response, and 1331 ms overall
17-03-18 03:16:53.224 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.133147
17-03-18 03:16:53.224 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13315 mm
17-03-18 03:16:53.224 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:53.224 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:16:53.224 -07 000000569 INF: Y Motor: Moving to 60.7426 mm, started at 59.9111 mm, delta = 0.8315 mm
17-03-18 03:16:53.224 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:53.234 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 29086, sync = True, waitForSettling = False)
17-03-18 03:16:53.234 -07 000000629 INF: Z Motor: Moving to -0.133147 mm, started at -0.132671 mm, distance = -0.48 um
17-03-18 03:16:53.234 -07 000000618 INF: FPGA: Recv YRDPOS 122698
17-03-18 03:16:53.244 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:53.244 -07 000000569 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:53.244 -07 000000569 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:53.244 -07 000000569 INF: Y Motor: Moving 1330 steps2
17-03-18 03:16:53.244 -07 000000629 INF: FPGA: Xmit ZDACW 29086\n [Z Motor]
17-03-18 03:16:53.244 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:16:53.254 -07 000000629 INF: FPGA: 'ZDACW 29086' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:16:53.254 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:53.254 -07 000000576 INF: FPGA: Recv ZDACR 29086
17-03-18 03:16:53.264 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:53.264 -07 000000629 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 03:16:53.264 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:53.434 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 03:16:53.434 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:16:53.434 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:53.444 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:53.444 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-18 03:16:53.554 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:16:53.554 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:16:53.554 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:53.564 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:53.564 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 528 ms.
17-03-18 03:16:53.644 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 03:16:53.644 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 401 ms overall
17-03-18 03:16:53.674 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:53.684 -07 000000606 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:16:53.684 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:16:53.684 -07 000000569 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:53.684 -07 000000569 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:16:53.684 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 402 ms, distance = 0.831 mm, average velocity = 2.068 mm/sec
17-03-18 03:16:54.634 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:54.634 -07 000000430 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:16:54.644 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:54.644 -07 000000569 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:54.674 -07 000000569 INF: Y Motor: After move to 60.742607, error = -0.009697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:54.674 -07 000000569 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:16:54.674 -07 000000569 INF: Y Motor: Moved to 60.7329 after 1441 ms (table move)
17-03-18 03:16:54.674 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133147 mm (DAC = 29086)
17-03-18 03:16:54.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:54.674 -07 000000501 INF: FPGA: Recv ZSGSRD 30030
17-03-18 03:16:54.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:16:54.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:54.684 -07 000000512 INF: FPGA: Recv ZSGSRD 30023
17-03-18 03:16:54.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:54.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:54.694 -07 000000561 INF: FPGA: Recv ZSGSRD 30020
17-03-18 03:16:54.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:54.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:54.704 -07 000000467 INF: FPGA: Recv ZSGSRD 30015
17-03-18 03:16:54.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:54.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:54.714 -07 000000629 INF: FPGA: Recv ZSGSRD 30022
17-03-18 03:16:54.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:54.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:54.724 -07 000000462 INF: FPGA: Recv ZSGSRD 30017
17-03-18 03:16:54.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:54.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:54.734 -07 000000512 INF: FPGA: Recv ZSGSRD 30021
17-03-18 03:16:54.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:54.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:54.744 -07 000000561 INF: FPGA: Recv ZSGSRD 30014
17-03-18 03:16:54.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:54.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:54.754 -07 000000502 INF: FPGA: Recv ZSGSRD 30012
17-03-18 03:16:54.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:54.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:54.764 -07 000000569 INF: FPGA: Recv ZSGSRD 30021
17-03-18 03:16:54.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:54.774 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:54.774 -07 000000501 INF: FPGA: Recv ZPIEZORD 25476
17-03-18 03:16:54.784 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:54.784 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.438 V. Piezo Error = -10.0 V.
17-03-18 03:16:54.784 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30020 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30020 (-132.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 30012 (-132.3 uncal um), Max = 30030 (-132.5 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:16:54.784 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30020, posNoise = 10, negNoise = 8
17-03-18 03:16:54.784 -07 000000610 INF: Z Motor: After move to -0.133147, error = -0.000031, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:54.784 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 107 ms (allowed 150 ms), total time = 1550 ms
17-03-18 03:16:54.784 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:54.834 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 03:16:54.834 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:54.834 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73291015625, Z-position -0.133178200506799. ----------
17-03-18 03:16:54.834 -07 000000610 INF: Cycle	110	Tile	2	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:54.834 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28909, sync = True, waitForSettling = True)
17-03-18 03:16:54.834 -07 000000610 INF: Z Motor: Moving to -0.132337 mm, started at -0.133178 mm, distance = 0.84 um
17-03-18 03:16:54.834 -07 000000610 INF: FPGA: Xmit ZDACW 28909\n [Z Motor]
17-03-18 03:16:54.844 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:16:54.844 -07 000000610 INF: FPGA: 'ZDACW 28909' command took 0 ms to send, 2 ms to get response, and 6 ms overall
17-03-18 03:16:54.844 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:54.844 -07 000000590 INF: FPGA: Recv ZDACR 28909
17-03-18 03:16:54.854 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:16:54.854 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:55.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:55.004 -07 000000455 INF: FPGA: Recv ZSGSRD 29890
17-03-18 03:16:55.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:55.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:55.014 -07 000000629 INF: FPGA: Recv ZSGSRD 29897
17-03-18 03:16:55.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:55.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:55.024 -07 000000501 INF: FPGA: Recv ZSGSRD 29889
17-03-18 03:16:55.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:55.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:55.034 -07 000000461 INF: FPGA: Recv ZSGSRD 29893
17-03-18 03:16:55.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:55.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:55.044 -07 000000430 INF: FPGA: Recv ZSGSRD 29893
17-03-18 03:16:55.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:55.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:55.054 -07 000000424 INF: FPGA: Recv ZSGSRD 29886
17-03-18 03:16:55.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:55.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:55.064 -07 000000629 INF: FPGA: Recv ZSGSRD 29892
17-03-18 03:16:55.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:55.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:55.074 -07 000000444 INF: FPGA: Recv ZSGSRD 29890
17-03-18 03:16:55.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:55.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:55.084 -07 000000618 INF: FPGA: Recv ZSGSRD 29891
17-03-18 03:16:55.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:55.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:55.094 -07 000000430 INF: FPGA: Recv ZSGSRD 29890
17-03-18 03:16:55.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:55.104 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:55.104 -07 000000455 INF: FPGA: Recv ZPIEZORD 25313
17-03-18 03:16:55.114 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:55.114 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.411 V. Piezo Error = -10.0 V.
17-03-18 03:16:55.114 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29891 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29890 (-131.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29886 (-131.5 uncal um), Max = 29897 (-131.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:16:55.114 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29891, posNoise = 6, negNoise = 5
17-03-18 03:16:55.114 -07 000000610 INF: Z Motor: After move to -0.132337, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:55.114 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:16:55.114 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:55.114 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:55.114 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:55.114 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:55.114 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:55.114 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:55.114 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:55.114 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:55.114 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:55.114 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:55.114 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:55.114 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:55.124 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:16:55.124 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:55.124 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:16:55.124 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:55.134 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 03:16:55.134 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:16:55.134 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 11 ms.
17-03-18 03:16:55.134 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 03:16:55.134 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 29086 150\n [Camera]
17-03-18 03:16:55.334 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:55.744 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:55.744 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:55.744 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:55.744 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:55.744 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:16:55.744 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:55.744 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:55.744 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:55.744 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:55.744 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:16:55.934 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29086 791
17-03-18 03:16:56.084 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:16:56.144 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 03:16:56.144 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 03:16:56.144 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:56.144 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 03:16:56.144 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 03:16:56.144 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:56.154 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:56.154 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 03:16:56.154 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:56.164 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-18 03:16:56.274 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:56.274 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:56.274 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:56.274 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:56.274 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:16:56.284 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:56.284 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:56.284 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:56.284 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:56.284 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 03:16:56.464 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:16:56.464 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:56.474 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 29086 150' command took 2 ms to send, 1329 ms to get response, and 1334 ms overall
17-03-18 03:16:56.474 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.133056
17-03-18 03:16:56.474 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13306 mm
17-03-18 03:16:56.474 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:56.474 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:16:56.474 -07 000000462 INF: Y Motor: Moving to 61.5726 mm, started at 60.7329 mm, delta = 0.8397 mm
17-03-18 03:16:56.474 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:56.474 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 29066, sync = True, waitForSettling = False)
17-03-18 03:16:56.474 -07 000000618 INF: Z Motor: Moving to -0.133056 mm, started at -0.132349 mm, distance = -0.71 um
17-03-18 03:16:56.474 -07 000000569 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:16:56.484 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:16:56.484 -07 000000462 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:56.484 -07 000000462 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:56.484 -07 000000462 INF: Y Motor: Moving 1344 steps-20
17-03-18 03:16:56.484 -07 000000618 INF: FPGA: Xmit ZDACW 29066\n [Z Motor]
17-03-18 03:16:56.484 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:16:56.494 -07 000000618 INF: FPGA: 'ZDACW 29066' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:16:56.494 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:56.494 -07 000000579 INF: FPGA: Recv ZDACR 29066
17-03-18 03:16:56.504 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:56.504 -07 000000618 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 03:16:56.504 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:56.554 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:16:56.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:16:56.674 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 03:16:56.674 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:16:56.674 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:56.684 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 03:16:56.684 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:16:56.684 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:56.684 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:56.684 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:16:56.684 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:56.694 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-18 03:16:56.874 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:16:56.874 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:16:56.924 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:56.924 -07 000000501 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:16:56.934 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:16:56.934 -07 000000462 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:56.934 -07 000000462 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:16:56.934 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.110 mm/sec
17-03-18 03:16:57.884 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:57.884 -07 000000455 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:16:57.894 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:57.894 -07 000000462 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:57.924 -07 000000462 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:16:57.924 -07 000000462 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:16:57.924 -07 000000462 INF: Y Motor: Moved to 61.5640 after 1446 ms (table move)
17-03-18 03:16:57.924 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133056 mm (DAC = 29066)
17-03-18 03:16:57.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:57.924 -07 000000606 INF: FPGA: Recv ZSGSRD 30004
17-03-18 03:16:57.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:16:57.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:57.934 -07 000000579 INF: FPGA: Recv ZSGSRD 29994
17-03-18 03:16:57.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:57.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:57.944 -07 000000455 INF: FPGA: Recv ZSGSRD 30003
17-03-18 03:16:57.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:57.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:57.954 -07 000000430 INF: FPGA: Recv ZSGSRD 30006
17-03-18 03:16:57.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:57.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:57.964 -07 000000618 INF: FPGA: Recv ZSGSRD 30006
17-03-18 03:16:57.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:57.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:57.974 -07 000000576 INF: FPGA: Recv ZSGSRD 29998
17-03-18 03:16:57.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:57.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:57.984 -07 000000424 INF: FPGA: Recv ZSGSRD 29996
17-03-18 03:16:57.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:57.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:57.994 -07 000000590 INF: FPGA: Recv ZSGSRD 30000
17-03-18 03:16:58.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.004 -07 000000629 INF: FPGA: Recv ZSGSRD 30006
17-03-18 03:16:58.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.014 -07 000000462 INF: FPGA: Recv ZSGSRD 30004
17-03-18 03:16:58.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.024 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:58.024 -07 000000606 INF: FPGA: Recv ZPIEZORD 25519
17-03-18 03:16:58.034 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.034 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.435 V. Piezo Error = -9.8 V.
17-03-18 03:16:58.034 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30002 (-132.3 uncal um), Error = 0.8 uncal um, Median = 30004 (-132.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29994 (-132.2 uncal um), Max = 30006 (-132.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:16:58.034 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30002, posNoise = 4, negNoise = 8
17-03-18 03:16:58.034 -07 000000610 INF: Z Motor: After move to -0.133056, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:58.034 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 107 ms (allowed 150 ms), total time = 1555 ms
17-03-18 03:16:58.034 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:16:58.084 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms
17-03-18 03:16:58.084 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:16:58.084 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.133062564688247. ----------
17-03-18 03:16:58.084 -07 000000610 INF: Cycle	110	Tile	3	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:16:58.084 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28889, sync = True, waitForSettling = True)
17-03-18 03:16:58.084 -07 000000610 INF: Z Motor: Moving to -0.132245 mm, started at -0.133063 mm, distance = 0.82 um
17-03-18 03:16:58.084 -07 000000610 INF: FPGA: Xmit ZDACW 28889\n [Z Motor]
17-03-18 03:16:58.084 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:16:58.094 -07 000000610 INF: FPGA: 'ZDACW 28889' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:16:58.094 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:58.094 -07 000000461 INF: FPGA: Recv ZDACR 28889
17-03-18 03:16:58.104 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.104 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:16:58.114 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.983999,
17-03-18 03:16:58.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.254 -07 000000561 INF: FPGA: Recv ZSGSRD 29881
17-03-18 03:16:58.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:16:58.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.264 -07 000000424 INF: FPGA: Recv ZSGSRD 29878
17-03-18 03:16:58.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.274 -07 000000590 INF: FPGA: Recv ZSGSRD 29878
17-03-18 03:16:58.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.284 -07 000000502 INF: FPGA: Recv ZSGSRD 29877
17-03-18 03:16:58.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.294 -07 000000591 INF: FPGA: Recv ZSGSRD 29878
17-03-18 03:16:58.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.304 -07 000000576 INF: FPGA: Recv ZSGSRD 29863
17-03-18 03:16:58.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.314 -07 000000430 INF: FPGA: Recv ZSGSRD 29877
17-03-18 03:16:58.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.324 -07 000000606 INF: FPGA: Recv ZSGSRD 29880
17-03-18 03:16:58.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.334 -07 000000569 INF: FPGA: Recv ZSGSRD 29867
17-03-18 03:16:58.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:16:58.344 -07 000000512 INF: FPGA: Recv ZSGSRD 29880
17-03-18 03:16:58.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.354 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:16:58.354 -07 000000501 INF: FPGA: Recv ZPIEZORD 25323
17-03-18 03:16:58.364 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:58.364 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.408 V. Piezo Error = -10.0 V.
17-03-18 03:16:58.364 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29876 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29878 (-131.5 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29863 (-131.4 uncal um), Max = 29881 (-131.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 13 (0.1 uncal um)
17-03-18 03:16:58.364 -07 000000610 INF: Z Motor: ADC noise = 13, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29876, posNoise = 5, negNoise = 13
17-03-18 03:16:58.364 -07 000000610 INF: Z Motor: After move to -0.132245, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:16:58.364 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:16:58.364 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:16:58.364 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:16:58.364 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:16:58.364 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:16:58.364 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:16:58.364 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:16:58.364 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:16:58.364 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:16:58.364 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:16:58.364 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:16:58.364 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:16:58.364 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:16:58.374 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:16:58.374 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:16:58.374 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:16:58.374 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:16:58.384 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:16:58.384 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:16:58.384 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:16:58.384 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:16:58.394 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 29066 150\n [Camera]
17-03-18 03:16:58.594 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:16:58.994 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:16:58.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:16:58.994 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:58.994 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:58.994 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:16:58.994 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:16:58.994 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:16:58.994 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:58.994 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:58.994 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 03:16:59.184 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29066 788
17-03-18 03:16:59.334 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:16:59.384 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:16:59.384 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:16:59.384 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:59.384 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:16:59.384 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:16:59.384 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:59.384 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:16:59.384 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:16:59.384 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:59.394 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:16:59.534 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:16:59.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:16:59.534 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:16:59.534 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:16:59.534 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 03:16:59.534 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:16:59.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:16:59.534 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:16:59.534 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:16:59.534 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:16:59.724 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:16:59.724 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:16:59.724 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 29066 150' command took 2 ms to send, 1322 ms to get response, and 1331 ms overall
17-03-18 03:16:59.724 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.132649
17-03-18 03:16:59.724 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13265 mm
17-03-18 03:16:59.724 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:16:59.724 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:16:59.724 -07 000000444 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 03:16:59.724 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:16:59.724 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 28977, sync = True, waitForSettling = False)
17-03-18 03:16:59.724 -07 000000467 INF: Z Motor: Moving to -0.132648 mm, started at -0.132253 mm, distance = -0.40 um
17-03-18 03:16:59.724 -07 000000502 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:16:59.734 -07 000000467 INF: FPGA: Xmit ZDACW 28977\n [Z Motor]
17-03-18 03:16:59.734 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:16:59.734 -07 000000444 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:16:59.734 -07 000000444 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:16:59.734 -07 000000444 INF: Y Motor: Moving 1342 steps-18
17-03-18 03:16:59.734 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:16:59.744 -07 000000467 INF: FPGA: 'ZDACW 28977' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:16:59.744 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:16:59.744 -07 000000579 INF: FPGA: Recv ZDACR 28977
17-03-18 03:16:59.754 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:16:59.754 -07 000000467 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 03:16:59.754 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:16:59.914 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:16:59.914 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:16:59.914 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:59.914 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:16:59.914 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:16:59.914 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:16:59.914 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:59.914 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:16:59.914 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:16:59.924 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:17:00.124 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 03:17:00.124 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 398 ms overall
17-03-18 03:17:00.174 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:00.174 -07 000000626 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:17:00.184 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:00.184 -07 000000444 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:00.184 -07 000000444 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:17:00.184 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.839 mm, average velocity = 2.107 mm/sec
17-03-18 03:17:01.134 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:01.134 -07 000000569 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:17:01.144 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:01.144 -07 000000444 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:01.164 -07 000000444 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:01.164 -07 000000444 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:17:01.164 -07 000000444 INF: Y Motor: Moved to 62.3955 after 1441 ms (table move)
17-03-18 03:17:01.174 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132648 mm (DAC = 28977)
17-03-18 03:17:01.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.174 -07 000000512 INF: FPGA: Recv ZSGSRD 29939
17-03-18 03:17:01.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.184 -07 000000430 INF: FPGA: Recv ZSGSRD 29938
17-03-18 03:17:01.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.194 -07 000000629 INF: FPGA: Recv ZSGSRD 29949
17-03-18 03:17:01.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.204 -07 000000467 INF: FPGA: Recv ZSGSRD 29943
17-03-18 03:17:01.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.214 -07 000000461 INF: FPGA: Recv ZSGSRD 29929
17-03-18 03:17:01.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.224 -07 000000561 INF: FPGA: Recv ZSGSRD 29939
17-03-18 03:17:01.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.234 -07 000000579 INF: FPGA: Recv ZSGSRD 29934
17-03-18 03:17:01.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.244 -07 000000618 INF: FPGA: Recv ZSGSRD 29943
17-03-18 03:17:01.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.254 -07 000000467 INF: FPGA: Recv ZSGSRD 29938
17-03-18 03:17:01.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.264 -07 000000462 INF: FPGA: Recv ZSGSRD 29938
17-03-18 03:17:01.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.274 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:01.274 -07 000000561 INF: FPGA: Recv ZPIEZORD 25480
17-03-18 03:17:01.284 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.284 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.422 V. Piezo Error = -9.8 V.
17-03-18 03:17:01.284 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.6 um, Read 10 ADC samples: Avg = 29939 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29938 (-131.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 29929 (-131.8 uncal um), Max = 29949 (-131.9 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:17:01.284 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29939, posNoise = 10, negNoise = 10
17-03-18 03:17:01.284 -07 000000610 INF: Z Motor: After move to -0.132648, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:01.284 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 110 ms (allowed 150 ms), total time = 1553 ms
17-03-18 03:17:01.284 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:01.324 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1595 ms
17-03-18 03:17:01.324 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:01.324 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.132657839323316. ----------
17-03-18 03:17:01.324 -07 000000610 INF: Cycle	110	Tile	4	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:01.324 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28800, sync = True, waitForSettling = True)
17-03-18 03:17:01.324 -07 000000610 INF: Z Motor: Moving to -0.131838 mm, started at -0.132658 mm, distance = 0.82 um
17-03-18 03:17:01.324 -07 000000610 INF: FPGA: Xmit ZDACW 28800\n [Z Motor]
17-03-18 03:17:01.324 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:17:01.334 -07 000000610 INF: FPGA: 'ZDACW 28800' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:01.334 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:01.334 -07 000000606 INF: FPGA: Recv ZDACR 28800
17-03-18 03:17:01.344 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.344 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:01.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.494 -07 000000502 INF: FPGA: Recv ZSGSRD 29816
17-03-18 03:17:01.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.504 -07 000000444 INF: FPGA: Recv ZSGSRD 29813
17-03-18 03:17:01.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.514 -07 000000455 INF: FPGA: Recv ZSGSRD 29815
17-03-18 03:17:01.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.524 -07 000000591 INF: FPGA: Recv ZSGSRD 29809
17-03-18 03:17:01.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.534 -07 000000576 INF: FPGA: Recv ZSGSRD 29810
17-03-18 03:17:01.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:01.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.544 -07 000000561 INF: FPGA: Recv ZSGSRD 29810
17-03-18 03:17:01.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.554 -07 000000579 INF: FPGA: Recv ZSGSRD 29811
17-03-18 03:17:01.554 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:01.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:01.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.564 -07 000000590 INF: FPGA: Recv ZSGSRD 29817
17-03-18 03:17:01.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.574 -07 000000579 INF: FPGA: Recv ZSGSRD 29807
17-03-18 03:17:01.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:01.584 -07 000000606 INF: FPGA: Recv ZSGSRD 29815
17-03-18 03:17:01.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.594 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:01.594 -07 000000569 INF: FPGA: Recv ZPIEZORD 25269
17-03-18 03:17:01.604 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:01.604 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.395 V. Piezo Error = -10.0 V.
17-03-18 03:17:01.604 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29812 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29812 (-131.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29807 (-131.0 uncal um), Max = 29817 (-131.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:17:01.604 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29812, posNoise = 5, negNoise = 5
17-03-18 03:17:01.604 -07 000000610 INF: Z Motor: After move to -0.131838, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:01.604 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:17:01.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:01.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:01.604 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:01.604 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:01.604 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:01.604 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:01.604 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:01.604 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:01.604 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:01.604 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:01.604 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:01.604 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:01.604 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:01.604 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:01.614 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:17:01.614 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:01.624 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:17:01.624 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:17:01.624 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:17:01.624 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:01.624 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28977 150\n [Camera]
17-03-18 03:17:01.834 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:02.234 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:02.234 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:02.234 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:02.234 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:02.234 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 03:17:02.234 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:02.244 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:02.244 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:02.244 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:02.244 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 03:17:02.424 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28977 788
17-03-18 03:17:02.574 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:02.614 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:17:02.614 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:17:02.614 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:02.614 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:17:02.614 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:17:02.614 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:02.624 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:02.624 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:17:02.624 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:02.624 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:17:02.774 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:02.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:02.774 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:02.774 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:02.774 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 03:17:02.774 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:02.774 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:02.774 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:02.774 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:02.774 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 03:17:02.964 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:17:02.964 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:02.964 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28977 150' command took 2 ms to send, 1323 ms to get response, and 1335 ms overall
17-03-18 03:17:02.964 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:17:02.964 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 5 at Y-position 62.3955078125, Z-Position -0.131841964381313. ------
17-03-18 03:17:02.964 -07 000000430 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:17:02.964 -07 000000576 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13849 mm
17-03-18 03:17:02.964 -07 000000576 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:02.974 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:17:02.974 -07 000000430 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:17:02.974 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:17:02.974 -07 000000430 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:17:02.974 -07 000000579 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 03:17:02.974 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 30253, sync = True, waitForSettling = False)
17-03-18 03:17:02.974 -07 000000424 INF: Z Motor: Moving to -0.138489 mm, started at -0.131842 mm, distance = -6.65 um
17-03-18 03:17:02.984 -07 000000424 INF: FPGA: Xmit ZDACW 30253\n [Z Motor]
17-03-18 03:17:02.984 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:17:02.994 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:02.994 -07 000000424 INF: FPGA: 'ZDACW 30253' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:17:02.994 -07 000000606 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:17:03.004 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-18 03:17:03.004 -07 000000579 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:03.004 -07 000000579 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:03.004 -07 000000579 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:17:03.004 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:03.004 -07 000000502 INF: FPGA: Recv ZDACR 30253
17-03-18 03:17:03.014 -07 000000424 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:17:03.014 -07 000000424 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-18 03:17:03.014 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:03.154 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:17:03.154 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:17:03.154 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:03.154 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:17:03.154 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:17:03.154 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:03.164 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:03.164 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:17:03.164 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:03.174 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:17:03.174 -07 000000590 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:17:03.174 -07 000000430 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-18 03:17:03.384 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:17:03.384 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:17:03.434 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:03.444 -07 000000461 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:17:03.444 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 5 ms overall
17-03-18 03:17:03.444 -07 000000579 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:03.444 -07 000000579 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 03:17:03.444 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.837 mm, average velocity = 2.157 mm/sec
17-03-18 03:17:03.474 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.978563,
17-03-18 03:17:04.394 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:04.394 -07 000000569 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:17:04.404 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:04.404 -07 000000579 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:04.434 -07 000000579 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:04.434 -07 000000579 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:17:04.434 -07 000000579 INF: Y Motor: Moved to 63.2241 after 1459 ms (table move)
17-03-18 03:17:04.434 -07 000000576 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138489 mm (DAC = 30253)
17-03-18 03:17:04.434 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:04.434 -07 000000455 INF: FPGA: Recv ZSGSRD 30843
17-03-18 03:17:04.444 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:17:04.444 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:04.444 -07 000000569 INF: FPGA: Recv ZSGSRD 30842
17-03-18 03:17:04.454 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:04.454 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:04.454 -07 000000618 INF: FPGA: Recv ZSGSRD 30852
17-03-18 03:17:04.464 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:04.464 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:04.464 -07 000000467 INF: FPGA: Recv ZSGSRD 30853
17-03-18 03:17:04.474 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:04.474 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:04.474 -07 000000579 INF: FPGA: Recv ZSGSRD 30849
17-03-18 03:17:04.484 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:04.484 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:04.484 -07 000000591 INF: FPGA: Recv ZSGSRD 30845
17-03-18 03:17:04.494 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:04.494 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:04.494 -07 000000606 INF: FPGA: Recv ZSGSRD 30843
17-03-18 03:17:04.504 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:04.504 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:04.504 -07 000000501 INF: FPGA: Recv ZSGSRD 30840
17-03-18 03:17:04.514 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:04.514 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:04.514 -07 000000629 INF: FPGA: Recv ZSGSRD 30849
17-03-18 03:17:04.524 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:04.524 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:04.524 -07 000000569 INF: FPGA: Recv ZSGSRD 30850
17-03-18 03:17:04.534 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:04.534 -07 000000576 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:04.534 -07 000000591 INF: FPGA: Recv ZPIEZORD 26661
17-03-18 03:17:04.544 -07 000000576 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:04.544 -07 000000576 INF: Z Motor: Piezo is near 37.0 V (nominally 0 to 100 V), expect near 46.2 V, since DAC is at 4.616 V. Piezo Error = -9.2 V.
17-03-18 03:17:04.544 -07 000000576 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.5 um, Read 10 ADC samples: Avg = 30847 (-137.7 uncal um), Error = 0.8 uncal um, Median = 30847 (-137.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 30840 (-137.6 uncal um), Max = 30853 (-137.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:17:04.544 -07 000000576 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30847, posNoise = 6, negNoise = 7
17-03-18 03:17:04.544 -07 000000576 INF: Z Motor: After move to -0.138489, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:04.544 -07 000000576 INF: Z Motor: Settle wait time = 1461 ms, measure time = 106 ms (allowed 150 ms), total time = 1567 ms
17-03-18 03:17:04.544 -07 000000576 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:04.594 -07 000000576 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1621 ms
17-03-18 03:17:04.594 -07 000000576 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:04.594 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:04.594 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:04.594 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:04.594 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:04.594 -07 000000629 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:17:04.594 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:04.594 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:04.594 -07 000000629 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:17:04.604 -07 000000629 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:04.604 -07 000000629 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:17:04.614 -07 000000629 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 03:17:04.614 -07 000000629 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:17:04.614 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:17:04.664 -07 000000467 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:17:04.964 -07 000000430 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:17:04.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:17:04.964 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:17:04.964 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 607263880, 0x0, 559484976) start.
17-03-18 03:17:05.004 -07 000000461 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:17:05.004 -07 000000561 INF: FPGA: Recv CAMSNAP
17-03-18 03:17:05.004 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 384 ms overall
17-03-18 03:17:05.094 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 607263880, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:17:05.094 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:05.094 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:17:05.094 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:17:05.104 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:17:05.104 -07 000000576 INF: Autofocus start
17-03-18 03:17:05.104 -07 000000576 INF: MeasureProfile start
17-03-18 03:17:05.104 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:17:05.114 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:17:05.114 -07 000000444 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:17:05.114 -07 000000576 INF: MeasureProfile done
17-03-18 03:17:05.114 -07 000000576 INF: X=16  Z correction [um]=0.0530179
17-03-18 03:17:05.114 -07 000000576 INF: Autofocus finished
17-03-18 03:17:05.314 -07 000000461 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:17:05.314 -07 000000444 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:17:05.314 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.138491023948035. ----------
17-03-18 03:17:05.324 -07 000000610 INF: Cycle	110	Tile	5	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:05.324 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28778, sync = True, waitForSettling = True)
17-03-18 03:17:05.324 -07 000000610 INF: Z Motor: Moving to -0.131737 mm, started at -0.138491 mm, distance = 6.75 um
17-03-18 03:17:05.324 -07 000000610 INF: FPGA: Xmit ZDACW 28778\n [Z Motor]
17-03-18 03:17:05.324 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:17:05.334 -07 000000610 INF: FPGA: 'ZDACW 28778' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:17:05.334 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:05.334 -07 000000561 INF: FPGA: Recv ZDACR 28778
17-03-18 03:17:05.344 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:05.344 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:05.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:05.494 -07 000000430 INF: FPGA: Recv ZSGSRD 29801
17-03-18 03:17:05.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:05.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:05.504 -07 000000606 INF: FPGA: Recv ZSGSRD 29800
17-03-18 03:17:05.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:05.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:05.514 -07 000000590 INF: FPGA: Recv ZSGSRD 29792
17-03-18 03:17:05.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:05.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:05.524 -07 000000512 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:17:05.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:05.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:05.534 -07 000000626 INF: FPGA: Recv ZSGSRD 29794
17-03-18 03:17:05.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:05.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:05.544 -07 000000501 INF: FPGA: Recv ZSGSRD 29789
17-03-18 03:17:05.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:05.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:05.554 -07 000000576 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:17:05.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:05.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:05.564 -07 000000467 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:17:05.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:05.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:05.574 -07 000000512 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:17:05.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:05.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:05.584 -07 000000569 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:17:05.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:05.594 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:05.594 -07 000000591 INF: FPGA: Recv ZPIEZORD 25294
17-03-18 03:17:05.604 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:05.604 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.391 V. Piezo Error = -9.9 V.
17-03-18 03:17:05.604 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29796 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29796 (-131.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29789 (-130.9 uncal um), Max = 29801 (-131.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:17:05.604 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29796, posNoise = 5, negNoise = 7
17-03-18 03:17:05.604 -07 000000610 INF: Z Motor: After move to -0.131737, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:05.604 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:17:05.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:05.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:05.604 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:05.604 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:05.604 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:05.604 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:05.604 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:05.604 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:05.604 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:05.604 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:05.604 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:05.604 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:05.614 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:17:05.614 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:05.614 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:05.614 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:05.614 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:17:05.614 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:17:05.624 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:17:05.624 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:17:05.624 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28954 150\n [Camera]
17-03-18 03:17:05.824 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:06.224 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:06.224 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:06.224 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:06.224 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:06.224 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-18 03:17:06.234 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:06.234 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:06.234 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:06.234 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:06.234 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-18 03:17:06.424 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28954 788
17-03-18 03:17:06.554 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:06.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:06.564 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:06.614 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:17:06.614 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:17:06.614 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:06.614 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:17:06.614 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:17:06.614 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:06.614 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:06.614 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:17:06.624 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:06.624 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:17:06.764 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:06.764 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:06.764 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:06.764 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:06.764 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-18 03:17:06.764 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:06.764 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:06.764 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:06.774 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:06.774 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-18 03:17:06.954 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:17:06.954 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:06.954 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28954 150' command took 2 ms to send, 1326 ms to get response, and 1331 ms overall
17-03-18 03:17:06.954 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.132163
17-03-18 03:17:06.954 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13216 mm
17-03-18 03:17:06.954 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:06.964 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:17:06.964 -07 000000579 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 03:17:06.964 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:06.964 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 28871, sync = True, waitForSettling = False)
17-03-18 03:17:06.964 -07 000000455 INF: Z Motor: Moving to -0.132163 mm, started at -0.131739 mm, distance = -0.42 um
17-03-18 03:17:06.964 -07 000000618 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:17:06.974 -07 000000455 INF: FPGA: Xmit ZDACW 28871\n [Z Motor]
17-03-18 03:17:06.974 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:06.974 -07 000000579 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:06.974 -07 000000579 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:06.974 -07 000000579 INF: Y Motor: Moving 1342 steps-17
17-03-18 03:17:06.974 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:17:06.984 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:06.984 -07 000000455 INF: FPGA: 'ZDACW 28871' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:17:06.994 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:06.994 -07 000000561 INF: FPGA: Recv ZDACR 28871
17-03-18 03:17:07.004 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:17:07.004 -07 000000455 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 03:17:07.144 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:17:07.144 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:17:07.144 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:07.144 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:17:07.144 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:17:07.144 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:07.154 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:07.154 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:17:07.154 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:17:07.154 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:17:07.354 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:17:07.354 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:17:07.404 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:07.404 -07 000000502 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:17:07.414 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:07.414 -07 000000579 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:07.414 -07 000000579 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-18 03:17:07.414 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.838 mm, average velocity = 2.167 mm/sec
17-03-18 03:17:08.364 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:08.364 -07 000000618 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:17:08.374 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:08.374 -07 000000579 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:08.394 -07 000000579 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:08.394 -07 000000579 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:17:08.394 -07 000000579 INF: Y Motor: Moved to 64.0571 after 1435 ms (table move)
17-03-18 03:17:08.394 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132163 mm (DAC = 28871)
17-03-18 03:17:08.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.404 -07 000000512 INF: FPGA: Recv ZSGSRD 29863
17-03-18 03:17:08.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:17:08.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.404 -07 000000569 INF: FPGA: Recv ZSGSRD 29862
17-03-18 03:17:08.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:08.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.414 -07 000000462 INF: FPGA: Recv ZSGSRD 29864
17-03-18 03:17:08.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.424 -07 000000606 INF: FPGA: Recv ZSGSRD 29863
17-03-18 03:17:08.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.434 -07 000000461 INF: FPGA: Recv ZSGSRD 29870
17-03-18 03:17:08.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.444 -07 000000561 INF: FPGA: Recv ZSGSRD 29856
17-03-18 03:17:08.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:08.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.454 -07 000000455 INF: FPGA: Recv ZSGSRD 29859
17-03-18 03:17:08.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.464 -07 000000590 INF: FPGA: Recv ZSGSRD 29858
17-03-18 03:17:08.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.474 -07 000000512 INF: FPGA: Recv ZSGSRD 29857
17-03-18 03:17:08.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.484 -07 000000444 INF: FPGA: Recv ZSGSRD 29864
17-03-18 03:17:08.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:08.494 -07 000000430 INF: FPGA: Recv ZPIEZORD 25390
17-03-18 03:17:08.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.504 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.405 V. Piezo Error = -9.8 V.
17-03-18 03:17:08.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29862 (-131.4 uncal um), Error = 0.8 uncal um, Median = 29862 (-131.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29856 (-131.3 uncal um), Max = 29870 (-131.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:08.504 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29862, posNoise = 8, negNoise = 6
17-03-18 03:17:08.504 -07 000000610 INF: Z Motor: After move to -0.132163, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:08.504 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 102 ms (allowed 150 ms), total time = 1539 ms
17-03-18 03:17:08.504 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:08.554 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1591 ms
17-03-18 03:17:08.554 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:08.554 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.132163174988401. ----------
17-03-18 03:17:08.554 -07 000000610 INF: Cycle	110	Tile	6	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:08.554 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28694, sync = True, waitForSettling = True)
17-03-18 03:17:08.554 -07 000000610 INF: Z Motor: Moving to -0.131353 mm, started at -0.132163 mm, distance = 0.81 um
17-03-18 03:17:08.554 -07 000000610 INF: FPGA: Xmit ZDACW 28694\n [Z Motor]
17-03-18 03:17:08.554 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:17:08.564 -07 000000610 INF: FPGA: 'ZDACW 28694' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:08.564 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:08.564 -07 000000502 INF: FPGA: Recv ZDACR 28694
17-03-18 03:17:08.574 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.574 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:08.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.724 -07 000000462 INF: FPGA: Recv ZSGSRD 29733
17-03-18 03:17:08.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:08.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.734 -07 000000576 INF: FPGA: Recv ZSGSRD 29736
17-03-18 03:17:08.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.744 -07 000000430 INF: FPGA: Recv ZSGSRD 29741
17-03-18 03:17:08.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.754 -07 000000606 INF: FPGA: Recv ZSGSRD 29740
17-03-18 03:17:08.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.764 -07 000000461 INF: FPGA: Recv ZSGSRD 29731
17-03-18 03:17:08.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.774 -07 000000591 INF: FPGA: Recv ZSGSRD 29743
17-03-18 03:17:08.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.784 -07 000000569 INF: FPGA: Recv ZSGSRD 29737
17-03-18 03:17:08.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.794 -07 000000502 INF: FPGA: Recv ZSGSRD 29740
17-03-18 03:17:08.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:08.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.804 -07 000000424 INF: FPGA: Recv ZSGSRD 29736
17-03-18 03:17:08.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:08.814 -07 000000512 INF: FPGA: Recv ZSGSRD 29732
17-03-18 03:17:08.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:08.834 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:08.834 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.004458,
17-03-18 03:17:08.834 -07 000000424 INF: FPGA: Recv ZPIEZORD 25236
17-03-18 03:17:08.844 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:17:08.844 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.378 V. Piezo Error = -9.9 V.
17-03-18 03:17:08.844 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29737 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29736 (-130.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29731 (-130.5 uncal um), Max = 29743 (-130.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:08.844 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29737, posNoise = 6, negNoise = 6
17-03-18 03:17:08.844 -07 000000610 INF: Z Motor: After move to -0.131353, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:08.844 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-18 03:17:08.844 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:08.844 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:08.844 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:08.844 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:08.844 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:08.844 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:08.844 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:08.844 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:08.844 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:08.844 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:08.844 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:08.844 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:08.844 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:17:08.844 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:08.854 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:08.854 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:08.864 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 03:17:08.864 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:17:08.864 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:17:08.864 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:17:08.884 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28871 150\n [Camera]
17-03-18 03:17:09.084 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:09.484 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:09.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:09.484 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:09.484 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:09.484 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-18 03:17:09.484 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:09.484 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:09.484 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:09.484 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:09.484 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-18 03:17:09.674 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28871 788
17-03-18 03:17:09.824 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:09.864 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:17:09.864 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:17:09.864 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:09.864 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:17:09.864 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:17:09.864 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:09.864 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:09.864 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:17:09.864 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:09.874 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:17:10.024 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:10.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:10.024 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:10.024 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:10.024 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-18 03:17:10.024 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:10.024 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:10.024 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:10.024 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:10.024 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start.
17-03-18 03:17:10.214 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:17:10.214 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:10.214 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28871 150' command took 2 ms to send, 1322 ms to get response, and 1344 ms overall
17-03-18 03:17:10.214 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.131966
17-03-18 03:17:10.214 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13197 mm
17-03-18 03:17:10.214 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:10.214 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:17:10.214 -07 000000606 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 03:17:10.214 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:10.214 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 28828, sync = True, waitForSettling = False)
17-03-18 03:17:10.214 -07 000000455 INF: Z Motor: Moving to -0.131966 mm, started at -0.131360 mm, distance = -0.61 um
17-03-18 03:17:10.224 -07 000000455 INF: FPGA: Xmit ZDACW 28828\n [Z Motor]
17-03-18 03:17:10.224 -07 000000467 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:17:10.224 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:17:10.224 -07 000000606 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:10.224 -07 000000606 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:10.224 -07 000000606 INF: Y Motor: Moving 1337 steps-11
17-03-18 03:17:10.224 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:17:10.234 -07 000000455 INF: FPGA: 'ZDACW 28828' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:17:10.234 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:10.234 -07 000000569 INF: FPGA: Recv ZDACR 28828
17-03-18 03:17:10.244 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:10.244 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:10.244 -07 000000455 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:17:10.414 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:17:10.414 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:17:10.414 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:10.414 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 390 ms.
17-03-18 03:17:10.414 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:17:10.414 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:10.424 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:17:10.424 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:17:10.424 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:17:10.434 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-18 03:17:10.614 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:17:10.614 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:17:10.664 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:10.674 -07 000000626 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:17:10.674 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:17:10.674 -07 000000606 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:10.674 -07 000000606 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:17:10.674 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.835 mm, average velocity = 2.104 mm/sec
17-03-18 03:17:11.554 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:11.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:11.624 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:11.624 -07 000000512 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:17:11.634 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:11.634 -07 000000606 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:11.654 -07 000000606 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:11.654 -07 000000606 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:17:11.654 -07 000000606 INF: Y Motor: Moved to 64.8789 after 1441 ms (table move)
17-03-18 03:17:11.664 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131966 mm (DAC = 28828)
17-03-18 03:17:11.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:11.664 -07 000000618 INF: FPGA: Recv ZSGSRD 29839
17-03-18 03:17:11.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:17:11.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:11.674 -07 000000569 INF: FPGA: Recv ZSGSRD 29833
17-03-18 03:17:11.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:11.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:11.684 -07 000000455 INF: FPGA: Recv ZSGSRD 29832
17-03-18 03:17:11.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:11.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:11.694 -07 000000576 INF: FPGA: Recv ZSGSRD 29839
17-03-18 03:17:11.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:11.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:11.704 -07 000000430 INF: FPGA: Recv ZSGSRD 29834
17-03-18 03:17:11.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:11.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:11.714 -07 000000502 INF: FPGA: Recv ZSGSRD 29832
17-03-18 03:17:11.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:11.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:11.724 -07 000000424 INF: FPGA: Recv ZSGSRD 29830
17-03-18 03:17:11.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:11.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:11.734 -07 000000462 INF: FPGA: Recv ZSGSRD 29828
17-03-18 03:17:11.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:11.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:11.744 -07 000000512 INF: FPGA: Recv ZSGSRD 29835
17-03-18 03:17:11.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:11.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:11.754 -07 000000590 INF: FPGA: Recv ZSGSRD 29834
17-03-18 03:17:11.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:11.764 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:11.764 -07 000000626 INF: FPGA: Recv ZPIEZORD 25346
17-03-18 03:17:11.774 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:11.774 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.399 V. Piezo Error = -9.8 V.
17-03-18 03:17:11.774 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.0 um, Read 10 ADC samples: Avg = 29834 (-131.2 uncal um), Error = 0.8 uncal um, Median = 29834 (-131.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29828 (-131.2 uncal um), Max = 29839 (-131.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:11.774 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29834, posNoise = 5, negNoise = 6
17-03-18 03:17:11.774 -07 000000610 INF: Z Motor: After move to -0.131966, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:11.774 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 109 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:17:11.774 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:11.824 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 03:17:11.824 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:11.824 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.131983297048431. ----------
17-03-18 03:17:11.824 -07 000000610 INF: Cycle	110	Tile	7	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:11.824 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28651, sync = True, waitForSettling = True)
17-03-18 03:17:11.824 -07 000000610 INF: Z Motor: Moving to -0.131156 mm, started at -0.131983 mm, distance = 0.83 um
17-03-18 03:17:11.824 -07 000000610 INF: FPGA: Xmit ZDACW 28651\n [Z Motor]
17-03-18 03:17:11.824 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:17:11.834 -07 000000610 INF: FPGA: 'ZDACW 28651' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:11.834 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:11.834 -07 000000606 INF: FPGA: Recv ZDACR 28651
17-03-18 03:17:11.844 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:11.844 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:11.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:11.994 -07 000000579 INF: FPGA: Recv ZSGSRD 29708
17-03-18 03:17:12.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:12.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:12.004 -07 000000569 INF: FPGA: Recv ZSGSRD 29711
17-03-18 03:17:12.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:12.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:12.014 -07 000000455 INF: FPGA: Recv ZSGSRD 29710
17-03-18 03:17:12.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:12.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:12.024 -07 000000502 INF: FPGA: Recv ZSGSRD 29712
17-03-18 03:17:12.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:12.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:12.034 -07 000000467 INF: FPGA: Recv ZSGSRD 29703
17-03-18 03:17:12.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:12.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:12.044 -07 000000462 INF: FPGA: Recv ZSGSRD 29704
17-03-18 03:17:12.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:12.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:12.054 -07 000000629 INF: FPGA: Recv ZSGSRD 29710
17-03-18 03:17:12.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:12.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:12.064 -07 000000606 INF: FPGA: Recv ZSGSRD 29707
17-03-18 03:17:12.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:12.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:12.074 -07 000000561 INF: FPGA: Recv ZSGSRD 29701
17-03-18 03:17:12.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:12.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:12.084 -07 000000424 INF: FPGA: Recv ZSGSRD 29710
17-03-18 03:17:12.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:12.094 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:12.094 -07 000000618 INF: FPGA: Recv ZPIEZORD 25179
17-03-18 03:17:12.104 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:12.104 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.372 V. Piezo Error = -9.9 V.
17-03-18 03:17:12.104 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.2 um, Read 10 ADC samples: Avg = 29708 (-130.4 uncal um), Error = 0.8 uncal um, Median = 29709 (-130.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29701 (-130.3 uncal um), Max = 29712 (-130.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:17:12.104 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29708, posNoise = 4, negNoise = 7
17-03-18 03:17:12.104 -07 000000610 INF: Z Motor: After move to -0.131156, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:12.104 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:17:12.104 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:12.104 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:12.104 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:12.104 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:12.104 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:12.104 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:12.104 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:12.104 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:12.104 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:12.104 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:12.104 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:17:12.104 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:12.114 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:17:12.114 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:12.114 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:17:12.114 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:12.124 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:17:12.124 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:12.124 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:17:12.124 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:12.134 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28828 150\n [Camera]
17-03-18 03:17:12.334 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:12.734 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:12.734 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:12.734 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:12.734 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:12.734 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start.
17-03-18 03:17:12.734 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:12.734 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:12.734 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:12.734 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:12.734 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start.
17-03-18 03:17:12.924 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28828 788
17-03-18 03:17:13.074 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:13.114 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:17:13.114 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:17:13.114 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:13.114 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:17:13.114 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:17:13.114 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:13.114 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:13.114 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:17:13.114 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:13.124 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:17:13.274 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:13.274 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:13.274 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:13.274 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:13.274 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-18 03:17:13.274 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:13.274 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:13.274 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:13.424 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:13.424 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 575712736, 0x0, 418435064) start.
17-03-18 03:17:13.464 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:17:13.464 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:13.464 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28828 150' command took 2 ms to send, 1321 ms to get response, and 1332 ms overall
17-03-18 03:17:13.464 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.131793
17-03-18 03:17:13.464 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13179 mm
17-03-18 03:17:13.464 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:13.464 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:17:13.464 -07 000000501 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-18 03:17:13.464 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:13.464 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 28790, sync = True, waitForSettling = False)
17-03-18 03:17:13.464 -07 000000569 INF: Z Motor: Moving to -0.131792 mm, started at -0.131174 mm, distance = -0.62 um
17-03-18 03:17:13.464 -07 000000561 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:17:13.474 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:13.474 -07 000000501 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:13.474 -07 000000501 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:13.474 -07 000000501 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:17:13.474 -07 000000569 INF: FPGA: Xmit ZDACW 28790\n [Z Motor]
17-03-18 03:17:13.474 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:17:13.484 -07 000000569 INF: FPGA: 'ZDACW 28790' command took 1 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:17:13.484 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:13.484 -07 000000606 INF: FPGA: Recv ZDACR 28790
17-03-18 03:17:13.494 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:13.494 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:13.494 -07 000000569 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 03:17:13.674 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 404 ms.
17-03-18 03:17:13.674 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:17:13.674 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:13.674 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:13.674 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms.
17-03-18 03:17:13.804 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 575712736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:17:13.804 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:17:13.804 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:13.804 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:13.814 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 537 ms.
17-03-18 03:17:13.864 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 03:17:13.864 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:17:13.924 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:13.924 -07 000000626 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:17:13.934 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:13.934 -07 000000501 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:13.934 -07 000000501 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:17:13.934 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.125 mm/sec
17-03-18 03:17:14.204 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.02213,
17-03-18 03:17:14.884 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:14.884 -07 000000569 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:17:14.894 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:14.894 -07 000000501 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:14.924 -07 000000501 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:14.924 -07 000000501 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:17:14.924 -07 000000501 INF: Y Motor: Moved to 65.7144 after 1456 ms (table move)
17-03-18 03:17:14.924 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131792 mm (DAC = 28790)
17-03-18 03:17:14.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:14.924 -07 000000576 INF: FPGA: Recv ZSGSRD 29803
17-03-18 03:17:14.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:14.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:14.934 -07 000000561 INF: FPGA: Recv ZSGSRD 29807
17-03-18 03:17:14.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:14.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:14.944 -07 000000591 INF: FPGA: Recv ZSGSRD 29807
17-03-18 03:17:14.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:14.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:14.954 -07 000000618 INF: FPGA: Recv ZSGSRD 29804
17-03-18 03:17:14.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:14.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:14.964 -07 000000569 INF: FPGA: Recv ZSGSRD 29809
17-03-18 03:17:14.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:14.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:14.974 -07 000000430 INF: FPGA: Recv ZSGSRD 29805
17-03-18 03:17:14.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:14.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:14.984 -07 000000561 INF: FPGA: Recv ZSGSRD 29798
17-03-18 03:17:14.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:14.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:14.994 -07 000000591 INF: FPGA: Recv ZSGSRD 29803
17-03-18 03:17:15.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.004 -07 000000462 INF: FPGA: Recv ZSGSRD 29812
17-03-18 03:17:15.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.014 -07 000000512 INF: FPGA: Recv ZSGSRD 29812
17-03-18 03:17:15.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.024 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:15.024 -07 000000502 INF: FPGA: Recv ZPIEZORD 25346
17-03-18 03:17:15.034 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:15.034 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.393 V. Piezo Error = -9.8 V.
17-03-18 03:17:15.034 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29806 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29806 (-131.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29798 (-131.0 uncal um), Max = 29812 (-131.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:17:15.034 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29806, posNoise = 6, negNoise = 8
17-03-18 03:17:15.034 -07 000000610 INF: Z Motor: After move to -0.131792, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:15.034 -07 000000610 INF: Z Motor: Settle wait time = 1457 ms, measure time = 106 ms (allowed 150 ms), total time = 1563 ms
17-03-18 03:17:15.034 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:15.084 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1615 ms
17-03-18 03:17:15.084 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:15.084 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.131803419108462. ----------
17-03-18 03:17:15.084 -07 000000610 INF: Cycle	110	Tile	8	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:15.084 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28613, sync = True, waitForSettling = True)
17-03-18 03:17:15.084 -07 000000610 INF: Z Motor: Moving to -0.130982 mm, started at -0.131803 mm, distance = 0.82 um
17-03-18 03:17:15.084 -07 000000610 INF: FPGA: Xmit ZDACW 28613\n [Z Motor]
17-03-18 03:17:15.084 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:17:15.094 -07 000000610 INF: FPGA: 'ZDACW 28613' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:15.094 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:15.094 -07 000000590 INF: FPGA: Recv ZDACR 28613
17-03-18 03:17:15.104 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.104 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:15.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.254 -07 000000424 INF: FPGA: Recv ZSGSRD 29679
17-03-18 03:17:15.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:15.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.264 -07 000000561 INF: FPGA: Recv ZSGSRD 29682
17-03-18 03:17:15.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.274 -07 000000502 INF: FPGA: Recv ZSGSRD 29683
17-03-18 03:17:15.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.284 -07 000000430 INF: FPGA: Recv ZSGSRD 29678
17-03-18 03:17:15.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.294 -07 000000461 INF: FPGA: Recv ZSGSRD 29677
17-03-18 03:17:15.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.304 -07 000000462 INF: FPGA: Recv ZSGSRD 29679
17-03-18 03:17:15.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.314 -07 000000629 INF: FPGA: Recv ZSGSRD 29680
17-03-18 03:17:15.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.324 -07 000000501 INF: FPGA: Recv ZSGSRD 29682
17-03-18 03:17:15.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.334 -07 000000444 INF: FPGA: Recv ZSGSRD 29682
17-03-18 03:17:15.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:15.344 -07 000000455 INF: FPGA: Recv ZSGSRD 29679
17-03-18 03:17:15.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.354 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:15.354 -07 000000579 INF: FPGA: Recv ZPIEZORD 25131
17-03-18 03:17:15.364 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:15.364 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.366 V. Piezo Error = -10.0 V.
17-03-18 03:17:15.364 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.0 um, Read 10 ADC samples: Avg = 29680 (-130.2 uncal um), Error = 0.8 uncal um, Median = 29680 (-130.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 29677 (-130.2 uncal um), Max = 29683 (-130.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:17:15.364 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29680, posNoise = 3, negNoise = 3
17-03-18 03:17:15.364 -07 000000610 INF: Z Motor: After move to -0.130982, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:15.364 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:17:15.364 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:15.364 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:15.364 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:15.364 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:15.364 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:15.364 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:15.364 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:15.364 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:15.364 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:15.364 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:15.364 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:15.364 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:15.364 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:15.374 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:15.374 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:17:15.374 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:15.384 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:17:15.384 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:17:15.384 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:17:15.384 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:17:15.384 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28790 150\n [Camera]
17-03-18 03:17:15.584 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:15.994 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:15.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:15.994 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:15.994 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:15.994 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:15.994 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:16.004 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:16.004 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:17:16.004 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:16.004 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:17:16.184 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28790 788
17-03-18 03:17:16.334 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:16.384 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:17:16.384 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:17:16.384 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:16.384 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:16.384 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 03:17:16.384 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:17:16.384 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:16.394 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:16.394 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:17:16.394 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:17:16.524 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:16.524 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:16.534 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:16.534 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:16.534 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) start.
17-03-18 03:17:16.534 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:16.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:16.534 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:16.644 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:16.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:16.654 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:16.654 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 575712736, 0x0, 418435064) start.
17-03-18 03:17:16.714 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:17:16.724 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:16.724 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28790 150' command took 2 ms to send, 1320 ms to get response, and 1331 ms overall
17-03-18 03:17:16.724 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:17:16.724 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 9 at Y-position 65.71435546875, Z-Position -0.1309939683786. ------
17-03-18 03:17:16.724 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:17:16.724 -07 000000576 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13732 mm
17-03-18 03:17:16.724 -07 000000576 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:16.724 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 29997, sync = True, waitForSettling = False)
17-03-18 03:17:16.724 -07 000000424 INF: Z Motor: Moving to -0.137317 mm, started at -0.130994 mm, distance = -6.32 um
17-03-18 03:17:16.724 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:17:16.724 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:17:16.734 -07 000000512 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-18 03:17:16.734 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:16.734 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:16.734 -07 000000444 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:17:16.744 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:16.744 -07 000000512 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:16.744 -07 000000512 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:16.744 -07 000000512 INF: Y Motor: Moving 1341 steps-18
17-03-18 03:17:16.744 -07 000000424 INF: FPGA: Xmit ZDACW 29997\n [Z Motor]
17-03-18 03:17:16.744 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:17:16.754 -07 000000629 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:17:16.754 -07 000000424 INF: FPGA: 'ZDACW 29997' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 03:17:16.764 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:16.774 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:16.774 -07 000000561 INF: FPGA: Recv ZDACR 29997
17-03-18 03:17:16.784 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:17:16.784 -07 000000424 INF: Z Motor: MoveAbsStepped took 51 ms (did NOT wait for settling yet))
17-03-18 03:17:16.904 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:17:16.904 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:17:16.904 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:16.914 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:16.914 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:17:16.954 -07 000000561 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:17:16.954 -07 000000629 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:17:17.024 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 575712736, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:17:17.024 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:17:17.024 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:17.034 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:17.044 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 510 ms.
17-03-18 03:17:17.144 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:17:17.144 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 400 ms overall
17-03-18 03:17:17.184 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:17.194 -07 000000461 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:17:17.194 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:17:17.194 -07 000000512 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:17.194 -07 000000512 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:17:17.194 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 401 ms, distance = 0.838 mm, average velocity = 2.090 mm/sec
17-03-18 03:17:18.144 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:18.144 -07 000000626 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:17:18.154 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:18.154 -07 000000512 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:18.184 -07 000000512 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:18.184 -07 000000512 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:17:18.184 -07 000000512 INF: Y Motor: Moved to 66.5391 after 1452 ms (table move)
17-03-18 03:17:18.184 -07 000000576 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137317 mm (DAC = 29997)
17-03-18 03:17:18.184 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:18.184 -07 000000502 INF: FPGA: Recv ZSGSRD 30666
17-03-18 03:17:18.194 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:18.194 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:18.194 -07 000000626 INF: FPGA: Recv ZSGSRD 30664
17-03-18 03:17:18.204 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:18.204 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:18.204 -07 000000561 INF: FPGA: Recv ZSGSRD 30674
17-03-18 03:17:18.214 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:18.214 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:18.214 -07 000000462 INF: FPGA: Recv ZSGSRD 30667
17-03-18 03:17:18.224 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:18.224 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:18.224 -07 000000455 INF: FPGA: Recv ZSGSRD 30669
17-03-18 03:17:18.234 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:18.234 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:18.234 -07 000000629 INF: FPGA: Recv ZSGSRD 30664
17-03-18 03:17:18.244 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:18.244 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:18.244 -07 000000606 INF: FPGA: Recv ZSGSRD 30660
17-03-18 03:17:18.254 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:18.254 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:18.254 -07 000000467 INF: FPGA: Recv ZSGSRD 30662
17-03-18 03:17:18.264 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:18.264 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:18.264 -07 000000501 INF: FPGA: Recv ZSGSRD 30663
17-03-18 03:17:18.274 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:18.274 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:18.274 -07 000000626 INF: FPGA: Recv ZSGSRD 30671
17-03-18 03:17:18.284 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:18.284 -07 000000576 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:18.284 -07 000000618 INF: FPGA: Recv ZPIEZORD 26487
17-03-18 03:17:18.294 -07 000000576 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:18.294 -07 000000576 INF: Z Motor: Piezo is near 36.6 V (nominally 0 to 100 V), expect near 45.8 V, since DAC is at 4.577 V. Piezo Error = -9.2 V.
17-03-18 03:17:18.294 -07 000000576 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.3 um, Read 10 ADC samples: Avg = 30666 (-136.5 uncal um), Error = 0.8 uncal um, Median = 30665 (-136.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30660 (-136.5 uncal um), Max = 30674 (-136.6 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:18.294 -07 000000576 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30666, posNoise = 8, negNoise = 6
17-03-18 03:17:18.294 -07 000000576 INF: Z Motor: After move to -0.137317, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:18.294 -07 000000576 INF: Z Motor: Settle wait time = 1457 ms, measure time = 105 ms (allowed 150 ms), total time = 1562 ms
17-03-18 03:17:18.294 -07 000000576 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:18.344 -07 000000576 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1614 ms
17-03-18 03:17:18.344 -07 000000576 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:18.344 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:18.344 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:18.344 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:18.344 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:18.344 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:17:18.344 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:18.344 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:18.344 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:17:18.354 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:18.354 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:17:18.364 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 03:17:18.364 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-18 03:17:18.364 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:17:18.414 -07 000000629 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:17:18.714 -07 000000461 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:17:18.714 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:17:18.714 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:17:18.714 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611135000, 0x0, 559484976) start.
17-03-18 03:17:18.754 -07 000000502 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:17:18.754 -07 000000512 INF: FPGA: Recv CAMSNAP
17-03-18 03:17:18.754 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 373 ms to get response, and 384 ms overall
17-03-18 03:17:18.844 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611135000, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:17:18.844 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:18.844 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:17:18.844 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:17:18.854 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:17:18.854 -07 000000462 INF: Autofocus start
17-03-18 03:17:18.854 -07 000000462 INF: MeasureProfile start
17-03-18 03:17:18.854 -07 000000430 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:17:18.864 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:17:18.864 -07 000000455 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:17:18.864 -07 000000462 INF: MeasureProfile done
17-03-18 03:17:18.864 -07 000000462 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:17:18.864 -07 000000462 INF: Autofocus finished
17-03-18 03:17:19.064 -07 000000501 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:17:19.064 -07 000000455 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-18 03:17:19.064 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.137328241550377. ----------
17-03-18 03:17:19.064 -07 000000610 INF: Cycle	110	Tile	9	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:19.074 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28505, sync = True, waitForSettling = True)
17-03-18 03:17:19.074 -07 000000610 INF: Z Motor: Moving to -0.130488 mm, started at -0.137328 mm, distance = 6.84 um
17-03-18 03:17:19.074 -07 000000610 INF: FPGA: Xmit ZDACW 28505\n [Z Motor]
17-03-18 03:17:19.074 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:17:19.084 -07 000000610 INF: FPGA: 'ZDACW 28505' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:19.084 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:19.084 -07 000000561 INF: FPGA: Recv ZDACR 28505
17-03-18 03:17:19.094 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:19.094 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:19.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:19.244 -07 000000501 INF: FPGA: Recv ZSGSRD 29611
17-03-18 03:17:19.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:19.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:19.254 -07 000000590 INF: FPGA: Recv ZSGSRD 29603
17-03-18 03:17:19.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:19.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:19.274 -07 000000561 INF: FPGA: Recv ZSGSRD 29604
17-03-18 03:17:19.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:17:19.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:19.284 -07 000000629 INF: FPGA: Recv ZSGSRD 29601
17-03-18 03:17:19.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:19.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:19.294 -07 000000430 INF: FPGA: Recv ZSGSRD 29605
17-03-18 03:17:19.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:19.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:19.304 -07 000000467 INF: FPGA: Recv ZSGSRD 29603
17-03-18 03:17:19.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:19.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:19.314 -07 000000444 INF: FPGA: Recv ZSGSRD 29605
17-03-18 03:17:19.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:19.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:19.324 -07 000000591 INF: FPGA: Recv ZSGSRD 29606
17-03-18 03:17:19.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:19.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:19.334 -07 000000501 INF: FPGA: Recv ZSGSRD 29602
17-03-18 03:17:19.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:19.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:19.344 -07 000000590 INF: FPGA: Recv ZSGSRD 29603
17-03-18 03:17:19.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:19.354 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:19.354 -07 000000455 INF: FPGA: Recv ZPIEZORD 25072
17-03-18 03:17:19.364 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:19.364 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.350 V. Piezo Error = -9.9 V.
17-03-18 03:17:19.364 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29604 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29604 (-129.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29601 (-129.7 uncal um), Max = 29611 (-129.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:17:19.364 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29604, posNoise = 7, negNoise = 3
17-03-18 03:17:19.364 -07 000000610 INF: Z Motor: After move to -0.130488, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:19.364 -07 000000610 INF: Z Motor: MoveAbsStepped took 289 ms)
17-03-18 03:17:19.364 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:19.364 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:19.364 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:19.364 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:19.364 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:19.364 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:19.364 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:19.364 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:19.364 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:19.364 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:19.364 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:17:19.364 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:19.374 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:19.374 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:19.374 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:17:19.374 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:19.384 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:17:19.384 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:19.384 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:17:19.384 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:19.384 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28681 150\n [Camera]
17-03-18 03:17:19.584 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.031682,
17-03-18 03:17:19.584 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:19.994 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:19.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:19.994 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:19.994 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:19.994 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:19.994 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:19.994 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:19.994 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:17:19.994 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:19.994 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:17:20.184 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28681 788
17-03-18 03:17:20.334 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:20.364 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 366 ms.
17-03-18 03:17:20.364 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 366 ms.
17-03-18 03:17:20.364 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:20.364 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:17:20.364 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:17:20.364 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:20.374 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:20.374 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:20.374 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:17:20.374 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:17:20.524 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:20.524 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:20.524 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:20.524 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:20.524 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:17:20.534 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:20.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:20.534 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:20.534 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:20.534 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:17:20.714 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:17:20.714 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:20.724 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28681 150' command took 2 ms to send, 1319 ms to get response, and 1331 ms overall
17-03-18 03:17:20.724 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131408
17-03-18 03:17:20.724 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13141 mm
17-03-18 03:17:20.724 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:20.724 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:17:20.724 -07 000000569 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-18 03:17:20.724 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:20.724 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 28706, sync = True, waitForSettling = False)
17-03-18 03:17:20.724 -07 000000430 INF: Z Motor: Moving to -0.131408 mm, started at -0.130506 mm, distance = -0.90 um
17-03-18 03:17:20.724 -07 000000561 INF: FPGA: Recv YRDPOS 136273
17-03-18 03:17:20.734 -07 000000430 INF: FPGA: Xmit ZDACW 28706\n [Z Motor]
17-03-18 03:17:20.734 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:17:20.734 -07 000000569 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:20.734 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:17:20.734 -07 000000569 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:20.734 -07 000000569 INF: Y Motor: Moving 1349 steps-28
17-03-18 03:17:20.744 -07 000000430 INF: FPGA: 'ZDACW 28706' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:17:20.744 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:20.754 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:20.754 -07 000000424 INF: FPGA: Recv ZDACR 28706
17-03-18 03:17:20.764 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:17:20.764 -07 000000430 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 03:17:20.914 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 03:17:20.914 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:17:20.914 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:17:20.914 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:20.914 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:17:20.914 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:20.924 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:20.924 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:17:20.924 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:17:20.924 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:17:21.114 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 03:17:21.114 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-18 03:17:21.164 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:21.164 -07 000000455 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:17:21.174 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:21.174 -07 000000569 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:21.174 -07 000000569 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-18 03:17:21.174 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.844 mm, average velocity = 2.202 mm/sec
17-03-18 03:17:21.554 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:21.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:22.124 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:22.124 -07 000000591 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:17:22.134 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:22.134 -07 000000569 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:22.154 -07 000000569 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:22.154 -07 000000569 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:17:22.154 -07 000000569 INF: Y Motor: Moved to 67.3721 after 1434 ms (table move)
17-03-18 03:17:22.164 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131408 mm (DAC = 28706)
17-03-18 03:17:22.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.164 -07 000000462 INF: FPGA: Recv ZSGSRD 29748
17-03-18 03:17:22.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:17:22.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.174 -07 000000576 INF: FPGA: Recv ZSGSRD 29746
17-03-18 03:17:22.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.184 -07 000000618 INF: FPGA: Recv ZSGSRD 29746
17-03-18 03:17:22.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.194 -07 000000455 INF: FPGA: Recv ZSGSRD 29750
17-03-18 03:17:22.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.204 -07 000000512 INF: FPGA: Recv ZSGSRD 29741
17-03-18 03:17:22.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.214 -07 000000629 INF: FPGA: Recv ZSGSRD 29741
17-03-18 03:17:22.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.224 -07 000000502 INF: FPGA: Recv ZSGSRD 29746
17-03-18 03:17:22.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.234 -07 000000591 INF: FPGA: Recv ZSGSRD 29741
17-03-18 03:17:22.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.244 -07 000000467 INF: FPGA: Recv ZSGSRD 29740
17-03-18 03:17:22.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.254 -07 000000424 INF: FPGA: Recv ZSGSRD 29747
17-03-18 03:17:22.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.264 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:22.264 -07 000000626 INF: FPGA: Recv ZPIEZORD 25256
17-03-18 03:17:22.274 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.274 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.380 V. Piezo Error = -9.8 V.
17-03-18 03:17:22.274 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29745 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29746 (-130.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29740 (-130.6 uncal um), Max = 29750 (-130.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:17:22.274 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29745, posNoise = 5, negNoise = 5
17-03-18 03:17:22.274 -07 000000610 INF: Z Motor: After move to -0.131408, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:22.274 -07 000000610 INF: Z Motor: Settle wait time = 1439 ms, measure time = 106 ms (allowed 150 ms), total time = 1545 ms
17-03-18 03:17:22.274 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:22.324 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-18 03:17:22.324 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:22.324 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.131411542167815. ----------
17-03-18 03:17:22.324 -07 000000610 INF: Cycle	110	Tile	10	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:22.324 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28529, sync = True, waitForSettling = True)
17-03-18 03:17:22.324 -07 000000610 INF: Z Motor: Moving to -0.130597 mm, started at -0.131412 mm, distance = 0.81 um
17-03-18 03:17:22.324 -07 000000610 INF: FPGA: Xmit ZDACW 28529\n [Z Motor]
17-03-18 03:17:22.324 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:17:22.334 -07 000000610 INF: FPGA: 'ZDACW 28529' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:22.334 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:22.334 -07 000000462 INF: FPGA: Recv ZDACR 28529
17-03-18 03:17:22.344 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.344 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:22.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.494 -07 000000502 INF: FPGA: Recv ZSGSRD 29615
17-03-18 03:17:22.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.504 -07 000000569 INF: FPGA: Recv ZSGSRD 29626
17-03-18 03:17:22.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.514 -07 000000629 INF: FPGA: Recv ZSGSRD 29626
17-03-18 03:17:22.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:22.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.524 -07 000000467 INF: FPGA: Recv ZSGSRD 29618
17-03-18 03:17:22.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.534 -07 000000424 INF: FPGA: Recv ZSGSRD 29617
17-03-18 03:17:22.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.544 -07 000000444 INF: FPGA: Recv ZSGSRD 29615
17-03-18 03:17:22.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.554 -07 000000430 INF: FPGA: Recv ZSGSRD 29620
17-03-18 03:17:22.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.564 -07 000000561 INF: FPGA: Recv ZSGSRD 29618
17-03-18 03:17:22.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.574 -07 000000502 INF: FPGA: Recv ZSGSRD 29615
17-03-18 03:17:22.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:22.584 -07 000000579 INF: FPGA: Recv ZSGSRD 29622
17-03-18 03:17:22.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.594 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:22.594 -07 000000462 INF: FPGA: Recv ZPIEZORD 25073
17-03-18 03:17:22.604 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:22.604 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.353 V. Piezo Error = -10.0 V.
17-03-18 03:17:22.604 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29619 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29618 (-129.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29615 (-129.8 uncal um), Max = 29626 (-129.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:17:22.604 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29619, posNoise = 7, negNoise = 4
17-03-18 03:17:22.604 -07 000000610 INF: Z Motor: After move to -0.130597, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:22.604 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:17:22.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:22.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:22.604 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:22.604 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:22.604 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:22.604 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:22.604 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:22.604 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:22.604 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:22.604 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:22.604 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:22.604 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:22.614 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:17:22.614 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:22.614 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:17:22.614 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:22.624 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:17:22.624 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:17:22.624 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:17:22.624 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:17:22.624 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28706 150\n [Camera]
17-03-18 03:17:22.824 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:23.224 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:23.224 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:23.224 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:23.224 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:23.224 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:17:23.234 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:23.234 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:23.234 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:23.234 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:23.234 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:17:23.424 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28706 788
17-03-18 03:17:23.564 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:23.604 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:17:23.604 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:17:23.604 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:23.614 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:17:23.614 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:17:23.614 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:23.614 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:23.614 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:23.614 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:17:23.624 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:17:23.764 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:23.764 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:23.764 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:23.764 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:23.764 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:17:23.764 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:23.764 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:23.764 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:23.764 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:23.764 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:17:23.954 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:17:23.954 -07 000000461 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:23.954 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28706 150' command took 2 ms to send, 1326 ms to get response, and 1331 ms overall
17-03-18 03:17:24.084 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.130879
17-03-18 03:17:24.084 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13088 mm
17-03-18 03:17:24.084 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:24.084 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:17:24.084 -07 000000606 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-18 03:17:24.084 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 28591, sync = True, waitForSettling = False)
17-03-18 03:17:24.084 -07 000000512 INF: Z Motor: Moving to -0.130881 mm, started at -0.130602 mm, distance = -0.28 um
17-03-18 03:17:24.094 -07 000000512 INF: FPGA: Xmit ZDACW 28591\n [Z Motor]
17-03-18 03:17:24.094 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:17:24.104 -07 000000512 INF: FPGA: 'ZDACW 28591' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:24.104 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:24.104 -07 000000561 INF: FPGA: Recv ZDACR 28591
17-03-18 03:17:24.114 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:24.114 -07 000000512 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 03:17:24.114 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:24.114 -07 000000462 INF: FPGA: Recv YRDPOS 137979
17-03-18 03:17:24.124 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-18 03:17:24.124 -07 000000606 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:24.124 -07 000000606 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:24.124 -07 000000606 INF: Y Motor: Moving 1344 steps-22
17-03-18 03:17:24.124 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:24.154 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:17:24.154 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:17:24.154 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:24.154 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:17:24.154 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:17:24.154 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:24.154 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:24.154 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:17:24.154 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:24.164 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:17:24.504 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 03:17:24.504 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 378 ms overall
17-03-18 03:17:24.544 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:24.554 -07 000000591 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:17:24.554 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 4 ms overall
17-03-18 03:17:24.554 -07 000000606 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:24.554 -07 000000606 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:17:24.554 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.841 mm, average velocity = 2.224 mm/sec
17-03-18 03:17:24.944 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.0344,
17-03-18 03:17:25.504 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:25.504 -07 000000512 INF: FPGA: Recv YRDPOS 139685
17-03-18 03:17:25.514 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.514 -07 000000606 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:25.534 -07 000000606 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:25.534 -07 000000606 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:17:25.534 -07 000000606 INF: Y Motor: Moved to 68.2056 after 1447 ms (table move)
17-03-18 03:17:25.534 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130881 mm (DAC = 28591)
17-03-18 03:17:25.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.544 -07 000000561 INF: FPGA: Recv ZSGSRD 29668
17-03-18 03:17:25.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 4 ms to get response, and 4 ms overall
17-03-18 03:17:25.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.544 -07 000000502 INF: FPGA: Recv ZSGSRD 29664
17-03-18 03:17:25.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:17:25.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.554 -07 000000501 INF: FPGA: Recv ZSGSRD 29659
17-03-18 03:17:25.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.564 -07 000000512 INF: FPGA: Recv ZSGSRD 29668
17-03-18 03:17:25.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.574 -07 000000591 INF: FPGA: Recv ZSGSRD 29658
17-03-18 03:17:25.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:25.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.584 -07 000000462 INF: FPGA: Recv ZSGSRD 29665
17-03-18 03:17:25.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.594 -07 000000569 INF: FPGA: Recv ZSGSRD 29667
17-03-18 03:17:25.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.604 -07 000000455 INF: FPGA: Recv ZSGSRD 29663
17-03-18 03:17:25.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.614 -07 000000430 INF: FPGA: Recv ZSGSRD 29657
17-03-18 03:17:25.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.624 -07 000000424 INF: FPGA: Recv ZSGSRD 29657
17-03-18 03:17:25.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.634 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:25.634 -07 000000606 INF: FPGA: Recv ZPIEZORD 25164
17-03-18 03:17:25.644 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.644 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.363 V. Piezo Error = -9.9 V.
17-03-18 03:17:25.644 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29663 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29664 (-130.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29657 (-130.1 uncal um), Max = 29668 (-130.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:25.644 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29663, posNoise = 5, negNoise = 6
17-03-18 03:17:25.644 -07 000000610 INF: Z Motor: After move to -0.130881, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:25.644 -07 000000610 INF: Z Motor: Settle wait time = 1449 ms, measure time = 102 ms (allowed 150 ms), total time = 1551 ms
17-03-18 03:17:25.644 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:25.694 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 03:17:25.694 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:25.694 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.13088475677219. ----------
17-03-18 03:17:25.694 -07 000000610 INF: Cycle	110	Tile	11	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:25.694 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28414, sync = True, waitForSettling = True)
17-03-18 03:17:25.694 -07 000000610 INF: Z Motor: Moving to -0.130071 mm, started at -0.130885 mm, distance = 0.81 um
17-03-18 03:17:25.694 -07 000000610 INF: FPGA: Xmit ZDACW 28414\n [Z Motor]
17-03-18 03:17:25.694 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:17:25.704 -07 000000610 INF: FPGA: 'ZDACW 28414' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:25.704 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:25.704 -07 000000462 INF: FPGA: Recv ZDACR 28414
17-03-18 03:17:25.714 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.714 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:25.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.864 -07 000000512 INF: FPGA: Recv ZSGSRD 29537
17-03-18 03:17:25.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.874 -07 000000455 INF: FPGA: Recv ZSGSRD 29535
17-03-18 03:17:25.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.884 -07 000000579 INF: FPGA: Recv ZSGSRD 29541
17-03-18 03:17:25.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.894 -07 000000576 INF: FPGA: Recv ZSGSRD 29538
17-03-18 03:17:25.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.904 -07 000000462 INF: FPGA: Recv ZSGSRD 29539
17-03-18 03:17:25.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.914 -07 000000590 INF: FPGA: Recv ZSGSRD 29536
17-03-18 03:17:25.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.924 -07 000000461 INF: FPGA: Recv ZSGSRD 29534
17-03-18 03:17:25.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.934 -07 000000626 INF: FPGA: Recv ZSGSRD 29540
17-03-18 03:17:25.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.944 -07 000000444 INF: FPGA: Recv ZSGSRD 29531
17-03-18 03:17:25.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:25.954 -07 000000591 INF: FPGA: Recv ZSGSRD 29538
17-03-18 03:17:25.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.964 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:25.964 -07 000000561 INF: FPGA: Recv ZPIEZORD 24996
17-03-18 03:17:25.974 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:25.974 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.336 V. Piezo Error = -10.0 V.
17-03-18 03:17:25.974 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.1 um, Read 10 ADC samples: Avg = 29537 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29538 (-129.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29531 (-129.3 uncal um), Max = 29541 (-129.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:25.974 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29537, posNoise = 4, negNoise = 6
17-03-18 03:17:25.974 -07 000000610 INF: Z Motor: After move to -0.130071, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:25.974 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:17:25.974 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:25.974 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:25.974 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:25.974 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:25.974 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:25.974 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:25.974 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:25.974 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:25.974 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:25.974 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:25.974 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:25.974 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:25.984 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:17:25.984 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:25.984 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:17:25.984 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:25.994 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:17:25.994 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:25.994 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:17:25.994 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:17:26.004 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28591 150\n [Camera]
17-03-18 03:17:26.204 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:26.554 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:26.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:26.604 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:26.604 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:26.604 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:26.604 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:26.604 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:26.604 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:26.604 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:26.604 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) start.
17-03-18 03:17:26.614 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:26.614 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:17:26.794 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28591 788
17-03-18 03:17:26.944 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:26.984 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:17:26.984 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:17:26.984 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:26.984 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:26.984 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:17:26.984 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:17:26.984 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:17:26.984 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:26.994 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:26.994 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:17:27.144 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:27.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:27.144 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:27.144 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:27.144 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:27.144 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:27.144 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:27.144 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:17:27.154 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:27.154 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:17:27.334 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:17:27.334 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:27.334 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28591 150' command took 2 ms to send, 1322 ms to get response, and 1331 ms overall
17-03-18 03:17:27.334 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.130789
17-03-18 03:17:27.334 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13079 mm
17-03-18 03:17:27.334 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:27.334 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:17:27.334 -07 000000467 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm
17-03-18 03:17:27.334 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:27.334 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 28571, sync = True, waitForSettling = False)
17-03-18 03:17:27.334 -07 000000606 INF: Z Motor: Moving to -0.130790 mm, started at -0.130075 mm, distance = -0.71 um
17-03-18 03:17:27.344 -07 000000606 INF: FPGA: Xmit ZDACW 28571\n [Z Motor]
17-03-18 03:17:27.344 -07 000000424 INF: FPGA: Recv YRDPOS 139685
17-03-18 03:17:27.344 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 4 ms to get response, and 5 ms overall
17-03-18 03:17:27.344 -07 000000467 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:27.344 -07 000000467 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:27.344 -07 000000467 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:17:27.344 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:17:27.354 -07 000000606 INF: FPGA: 'ZDACW 28571' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:27.354 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:27.364 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:27.364 -07 000000591 INF: FPGA: Recv ZDACR 28571
17-03-18 03:17:27.374 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:17:27.374 -07 000000606 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:17:27.524 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:17:27.524 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:17:27.524 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:27.524 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:27.534 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:17:27.534 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:17:27.534 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:17:27.534 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:27.534 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:27.544 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:17:27.724 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:17:27.724 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-18 03:17:27.774 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:27.784 -07 000000424 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:17:27.784 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:17:27.784 -07 000000467 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:27.784 -07 000000467 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:17:27.784 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.837 mm, average velocity = 2.185 mm/sec
17-03-18 03:17:28.734 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:28.734 -07 000000618 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:17:28.744 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:28.744 -07 000000467 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:28.764 -07 000000467 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:28.764 -07 000000467 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:17:28.764 -07 000000467 INF: Y Motor: Moved to 69.0273 after 1431 ms (table move)
17-03-18 03:17:28.774 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130790 mm (DAC = 28571)
17-03-18 03:17:28.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:28.774 -07 000000430 INF: FPGA: Recv ZSGSRD 29644
17-03-18 03:17:28.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:17:28.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:28.784 -07 000000502 INF: FPGA: Recv ZSGSRD 29648
17-03-18 03:17:28.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:28.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:28.794 -07 000000569 INF: FPGA: Recv ZSGSRD 29652
17-03-18 03:17:28.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:28.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:28.804 -07 000000590 INF: FPGA: Recv ZSGSRD 29653
17-03-18 03:17:28.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:28.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:28.814 -07 000000606 INF: FPGA: Recv ZSGSRD 29651
17-03-18 03:17:28.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:28.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:28.824 -07 000000462 INF: FPGA: Recv ZSGSRD 29645
17-03-18 03:17:28.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:28.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:28.834 -07 000000502 INF: FPGA: Recv ZSGSRD 29647
17-03-18 03:17:28.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:28.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:28.844 -07 000000561 INF: FPGA: Recv ZSGSRD 29650
17-03-18 03:17:28.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:28.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:28.854 -07 000000618 INF: FPGA: Recv ZSGSRD 29647
17-03-18 03:17:28.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:28.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:28.864 -07 000000444 INF: FPGA: Recv ZSGSRD 29651
17-03-18 03:17:28.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:28.874 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:28.874 -07 000000579 INF: FPGA: Recv ZPIEZORD 25175
17-03-18 03:17:28.884 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:28.884 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.360 V. Piezo Error = -9.8 V.
17-03-18 03:17:28.884 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.8 um, Read 10 ADC samples: Avg = 29649 (-130.0 uncal um), Error = 0.8 uncal um, Median = 29649 (-130.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29644 (-130.0 uncal um), Max = 29653 (-130.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:17:28.884 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29649, posNoise = 4, negNoise = 5
17-03-18 03:17:28.884 -07 000000610 INF: Z Motor: After move to -0.130790, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:28.884 -07 000000610 INF: Z Motor: Settle wait time = 1432 ms, measure time = 110 ms (allowed 150 ms), total time = 1542 ms
17-03-18 03:17:28.884 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:28.924 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1583 ms
17-03-18 03:17:28.924 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:28.924 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.130794817802206. ----------
17-03-18 03:17:28.924 -07 000000610 INF: Cycle	110	Tile	12	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:28.924 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28394, sync = True, waitForSettling = True)
17-03-18 03:17:28.924 -07 000000610 INF: Z Motor: Moving to -0.129979 mm, started at -0.130795 mm, distance = 0.82 um
17-03-18 03:17:28.924 -07 000000610 INF: FPGA: Xmit ZDACW 28394\n [Z Motor]
17-03-18 03:17:28.924 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:17:28.934 -07 000000610 INF: FPGA: 'ZDACW 28394' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:28.934 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:28.934 -07 000000561 INF: FPGA: Recv ZDACR 28394
17-03-18 03:17:28.944 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:28.944 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:29.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:29.094 -07 000000512 INF: FPGA: Recv ZSGSRD 29520
17-03-18 03:17:29.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:29.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:29.104 -07 000000461 INF: FPGA: Recv ZSGSRD 29526
17-03-18 03:17:29.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:29.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:29.114 -07 000000576 INF: FPGA: Recv ZSGSRD 29521
17-03-18 03:17:29.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:29.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:29.124 -07 000000590 INF: FPGA: Recv ZSGSRD 29524
17-03-18 03:17:29.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:29.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:29.134 -07 000000561 INF: FPGA: Recv ZSGSRD 29524
17-03-18 03:17:29.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:29.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:29.144 -07 000000424 INF: FPGA: Recv ZSGSRD 29530
17-03-18 03:17:29.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:29.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:29.154 -07 000000455 INF: FPGA: Recv ZSGSRD 29526
17-03-18 03:17:29.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:29.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:29.164 -07 000000467 INF: FPGA: Recv ZSGSRD 29517
17-03-18 03:17:29.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:29.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:29.174 -07 000000626 INF: FPGA: Recv ZSGSRD 29525
17-03-18 03:17:29.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:29.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:29.184 -07 000000569 INF: FPGA: Recv ZSGSRD 29525
17-03-18 03:17:29.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:29.194 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:29.194 -07 000000512 INF: FPGA: Recv ZPIEZORD 24989
17-03-18 03:17:29.204 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:29.204 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.333 V. Piezo Error = -9.9 V.
17-03-18 03:17:29.204 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.0 um, Read 10 ADC samples: Avg = 29524 (-129.2 uncal um), Error = 0.8 uncal um, Median = 29524 (-129.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29517 (-129.2 uncal um), Max = 29530 (-129.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:17:29.204 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29524, posNoise = 6, negNoise = 7
17-03-18 03:17:29.204 -07 000000610 INF: Z Motor: After move to -0.129979, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:29.204 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:17:29.204 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:29.204 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:29.204 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:29.204 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:29.204 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:29.204 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:29.204 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:29.204 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:29.204 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:29.204 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:29.204 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:29.204 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:29.214 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:29.214 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:29.214 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:17:29.214 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:29.224 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:17:29.224 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:29.224 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:17:29.224 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:17:29.234 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28571 150\n [Camera]
17-03-18 03:17:29.424 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:29.834 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:29.834 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:29.834 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:29.834 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:29.834 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:17:29.834 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:29.834 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:29.834 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:29.834 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:29.834 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) start.
17-03-18 03:17:30.024 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28571 788
17-03-18 03:17:30.174 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:30.214 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:17:30.214 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:17:30.214 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:30.214 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:17:30.214 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:17:30.214 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:30.214 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:30.214 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:17:30.214 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:30.224 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:17:30.304 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.027603,
17-03-18 03:17:30.374 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:30.374 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:30.374 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:30.494 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:30.494 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:30.494 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:30.494 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:30.494 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) start.
17-03-18 03:17:30.494 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:30.504 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:17:30.564 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:17:30.564 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:30.564 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28571 150' command took 2 ms to send, 1322 ms to get response, and 1331 ms overall
17-03-18 03:17:30.564 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:17:30.564 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 13 at Y-position 69.02734375, Z-Position -0.129991791284486. ------
17-03-18 03:17:30.564 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:17:30.564 -07 000000512 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13643 mm
17-03-18 03:17:30.564 -07 000000512 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:30.574 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:17:30.574 -07 000000590 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-18 03:17:30.574 -07 000000606 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:17:30.574 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:30.574 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:30.574 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 29802, sync = True, waitForSettling = False)
17-03-18 03:17:30.574 -07 000000591 INF: Z Motor: Moving to -0.136425 mm, started at -0.129992 mm, distance = -6.43 um
17-03-18 03:17:30.574 -07 000000462 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:17:30.584 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:30.584 -07 000000590 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:30.584 -07 000000590 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:30.584 -07 000000590 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:17:30.584 -07 000000591 INF: FPGA: Xmit ZDACW 29802\n [Z Motor]
17-03-18 03:17:30.584 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:17:30.594 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:17:30.594 -07 000000591 INF: FPGA: 'ZDACW 29802' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:17:30.604 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:30.614 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:30.614 -07 000000502 INF: FPGA: Recv ZDACR 29802
17-03-18 03:17:30.624 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:17:30.624 -07 000000591 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-18 03:17:30.794 -07 000000461 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:17:30.794 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall
17-03-18 03:17:30.874 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:17:30.874 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:17:30.874 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:30.874 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:17:30.874 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:17:30.874 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:30.884 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:17:30.884 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:17:30.884 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 513 ms.
17-03-18 03:17:30.894 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:17:30.974 -07 000000430 INF: FPGA: Recv YMVTILE
17-03-18 03:17:30.974 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:17:31.024 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:31.024 -07 000000618 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:17:31.034 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:31.034 -07 000000590 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:31.034 -07 000000590 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:17:31.034 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.129 mm/sec
17-03-18 03:17:31.564 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:31.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:31.984 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:31.984 -07 000000626 INF: FPGA: Recv YRDPOS 143081
17-03-18 03:17:31.994 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:31.994 -07 000000590 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:32.014 -07 000000590 INF: Y Motor: After move to 69.872612, error = -0.008842, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:32.014 -07 000000590 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:17:32.014 -07 000000590 INF: Y Motor: Moved to 69.8638 after 1449 ms (table move)
17-03-18 03:17:32.024 -07 000000512 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136425 mm (DAC = 29802)
17-03-18 03:17:32.024 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:32.024 -07 000000455 INF: FPGA: Recv ZSGSRD 30527
17-03-18 03:17:32.034 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:17:32.034 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:32.034 -07 000000501 INF: FPGA: Recv ZSGSRD 30524
17-03-18 03:17:32.044 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:32.044 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:32.044 -07 000000467 INF: FPGA: Recv ZSGSRD 30519
17-03-18 03:17:32.054 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:32.054 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:32.054 -07 000000591 INF: FPGA: Recv ZSGSRD 30525
17-03-18 03:17:32.064 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:32.064 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:32.064 -07 000000424 INF: FPGA: Recv ZSGSRD 30526
17-03-18 03:17:32.074 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:32.074 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:32.074 -07 000000579 INF: FPGA: Recv ZSGSRD 30520
17-03-18 03:17:32.084 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:32.084 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:32.084 -07 000000430 INF: FPGA: Recv ZSGSRD 30525
17-03-18 03:17:32.094 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:32.094 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:32.094 -07 000000590 INF: FPGA: Recv ZSGSRD 30524
17-03-18 03:17:32.104 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:32.104 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:32.104 -07 000000455 INF: FPGA: Recv ZSGSRD 30527
17-03-18 03:17:32.114 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:32.114 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:32.114 -07 000000561 INF: FPGA: Recv ZSGSRD 30535
17-03-18 03:17:32.124 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:32.124 -07 000000512 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:32.124 -07 000000444 INF: FPGA: Recv ZPIEZORD 26324
17-03-18 03:17:32.134 -07 000000512 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:32.134 -07 000000512 INF: Z Motor: Piezo is near 36.2 V (nominally 0 to 100 V), expect near 45.5 V, since DAC is at 4.547 V. Piezo Error = -9.2 V.
17-03-18 03:17:32.134 -07 000000512 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.4 um, Read 10 ADC samples: Avg = 30525 (-135.6 uncal um), Error = 0.8 uncal um, Median = 30525 (-135.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 30519 (-135.6 uncal um), Max = 30535 (-135.7 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:32.134 -07 000000512 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30525, posNoise = 10, negNoise = 6
17-03-18 03:17:32.134 -07 000000512 INF: Z Motor: After move to -0.136425, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:32.134 -07 000000512 INF: Z Motor: Settle wait time = 1451 ms, measure time = 109 ms (allowed 150 ms), total time = 1560 ms
17-03-18 03:17:32.134 -07 000000512 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:32.184 -07 000000512 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:17:32.184 -07 000000512 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:32.184 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:32.184 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:32.184 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:32.184 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:32.184 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:17:32.184 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:32.184 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:32.184 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:17:32.194 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:32.194 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:17:32.204 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 03:17:32.204 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-18 03:17:32.204 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:17:32.254 -07 000000629 INF: FPGA: Recv @CAMSNAP turning led on 41
17-03-18 03:17:32.554 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 341
17-03-18 03:17:32.554 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 341
17-03-18 03:17:32.554 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:17:32.554 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611135000, 0x0, 559484976) start.
17-03-18 03:17:32.594 -07 000000455 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:17:32.594 -07 000000424 INF: FPGA: Recv CAMSNAP
17-03-18 03:17:32.594 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 373 ms to get response, and 385 ms overall
17-03-18 03:17:32.684 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611135000, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:17:32.684 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:32.684 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:17:32.684 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:17:32.694 -07 000000462 INF: Autofocus start
17-03-18 03:17:32.694 -07 000000462 INF: MeasureProfile start
17-03-18 03:17:32.694 -07 000000430 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:17:32.694 -07 000000467 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:17:32.704 -07 000000430 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:17:32.704 -07 000000430 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:17:32.704 -07 000000462 INF: MeasureProfile done
17-03-18 03:17:32.704 -07 000000462 INF: X=16  Z correction [um]=0.0530179
17-03-18 03:17:32.704 -07 000000462 INF: Autofocus finished
17-03-18 03:17:32.904 -07 000000512 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:17:32.904 -07 000000430 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-18 03:17:32.914 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86376953125, Z-position -0.136422427638388. ----------
17-03-18 03:17:32.914 -07 000000610 INF: Cycle	110	Tile	13	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:32.914 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28326, sync = True, waitForSettling = True)
17-03-18 03:17:32.914 -07 000000610 INF: Z Motor: Moving to -0.129668 mm, started at -0.136422 mm, distance = 6.75 um
17-03-18 03:17:32.914 -07 000000610 INF: FPGA: Xmit ZDACW 28326\n [Z Motor]
17-03-18 03:17:32.924 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:17:32.934 -07 000000610 INF: FPGA: 'ZDACW 28326' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:32.934 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:32.934 -07 000000512 INF: FPGA: Recv ZDACR 28326
17-03-18 03:17:32.944 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:32.944 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:33.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:33.094 -07 000000590 INF: FPGA: Recv ZSGSRD 29471
17-03-18 03:17:33.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:33.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:33.104 -07 000000629 INF: FPGA: Recv ZSGSRD 29479
17-03-18 03:17:33.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:33.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:33.114 -07 000000512 INF: FPGA: Recv ZSGSRD 29471
17-03-18 03:17:33.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:33.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:33.124 -07 000000444 INF: FPGA: Recv ZSGSRD 29468
17-03-18 03:17:33.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:33.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:33.134 -07 000000461 INF: FPGA: Recv ZSGSRD 29476
17-03-18 03:17:33.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:33.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:33.144 -07 000000502 INF: FPGA: Recv ZSGSRD 29479
17-03-18 03:17:33.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:33.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:33.154 -07 000000606 INF: FPGA: Recv ZSGSRD 29477
17-03-18 03:17:33.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:33.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:33.164 -07 000000591 INF: FPGA: Recv ZSGSRD 29479
17-03-18 03:17:33.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:33.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:33.174 -07 000000462 INF: FPGA: Recv ZSGSRD 29469
17-03-18 03:17:33.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:33.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:33.184 -07 000000629 INF: FPGA: Recv ZSGSRD 29476
17-03-18 03:17:33.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:33.194 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:33.194 -07 000000501 INF: FPGA: Recv ZPIEZORD 24966
17-03-18 03:17:33.204 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:33.204 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.322 V. Piezo Error = -9.9 V.
17-03-18 03:17:33.204 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.7 um, Read 10 ADC samples: Avg = 29474 (-128.9 uncal um), Error = 0.8 uncal um, Median = 29476 (-128.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29468 (-128.9 uncal um), Max = 29479 (-128.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:33.204 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29474, posNoise = 5, negNoise = 6
17-03-18 03:17:33.204 -07 000000610 INF: Z Motor: After move to -0.129668, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:33.204 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 03:17:33.204 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:33.204 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:33.204 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:33.204 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:33.204 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:33.204 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:33.204 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:33.204 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:33.204 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:33.204 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:33.204 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:33.204 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:33.204 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:17:33.214 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:33.214 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:17:33.214 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:33.214 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:17:33.214 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:17:33.224 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:17:33.224 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:17:33.224 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28503 150\n [Camera]
17-03-18 03:17:33.424 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:33.824 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:33.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:33.824 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:33.824 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:33.834 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:33.834 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:33.834 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:33.834 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:17:33.834 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:33.834 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:17:34.014 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28503 788
17-03-18 03:17:34.164 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:34.214 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 03:17:34.214 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:17:34.214 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:34.224 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:34.224 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:17:34.224 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 391 ms.
17-03-18 03:17:34.224 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:17:34.224 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:34.224 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:34.234 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-18 03:17:34.364 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:34.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:34.364 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:34.484 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:34.484 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:34.484 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:34.484 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:34.484 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) start.
17-03-18 03:17:34.484 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:34.484 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:17:34.554 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:17:34.554 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:34.554 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28503 150' command took 2 ms to send, 1326 ms to get response, and 1332 ms overall
17-03-18 03:17:34.554 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.129605
17-03-18 03:17:34.554 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.12961 mm
17-03-18 03:17:34.554 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:34.564 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:17:34.564 -07 000000501 INF: Y Motor: Moving to 70.7026 mm, started at 69.8638 mm, delta = 0.8388 mm
17-03-18 03:17:34.564 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:34.564 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 28312, sync = True, waitForSettling = False)
17-03-18 03:17:34.564 -07 000000590 INF: Z Motor: Moving to -0.129604 mm, started at -0.129671 mm, distance = 0.07 um
17-03-18 03:17:34.564 -07 000000461 INF: FPGA: Recv YRDPOS 143081
17-03-18 03:17:34.574 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:34.574 -07 000000501 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:34.574 -07 000000501 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:34.574 -07 000000501 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:17:34.574 -07 000000590 INF: FPGA: Xmit ZDACW 28312\n [Z Motor]
17-03-18 03:17:34.574 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:17:34.584 -07 000000590 INF: FPGA: 'ZDACW 28312' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:17:34.584 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:34.584 -07 000000424 INF: FPGA: Recv ZDACR 28312
17-03-18 03:17:34.594 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:34.594 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:34.594 -07 000000590 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet))
17-03-18 03:17:34.864 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:17:34.864 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:17:34.864 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:34.864 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 575712736, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:17:34.864 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:17:34.864 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:34.864 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:34.874 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:17:34.874 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 508 ms.
17-03-18 03:17:34.874 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:17:34.964 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-18 03:17:34.964 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:17:35.014 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:35.014 -07 000000590 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:17:35.024 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:17:35.024 -07 000000501 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:35.024 -07 000000501 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:17:35.024 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.113 mm/sec
17-03-18 03:17:35.664 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 4.018051,
17-03-18 03:17:35.974 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:35.974 -07 000000512 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:17:35.984 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:35.984 -07 000000501 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:36.004 -07 000000501 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:36.004 -07 000000501 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:17:36.004 -07 000000501 INF: Y Motor: Moved to 70.6885 after 1447 ms (table move)
17-03-18 03:17:36.014 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129604 mm (DAC = 28312)
17-03-18 03:17:36.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.014 -07 000000424 INF: FPGA: Recv ZSGSRD 29466
17-03-18 03:17:36.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:17:36.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.024 -07 000000569 INF: FPGA: Recv ZSGSRD 29456
17-03-18 03:17:36.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.034 -07 000000461 INF: FPGA: Recv ZSGSRD 29462
17-03-18 03:17:36.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.044 -07 000000606 INF: FPGA: Recv ZSGSRD 29461
17-03-18 03:17:36.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.054 -07 000000629 INF: FPGA: Recv ZSGSRD 29466
17-03-18 03:17:36.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.064 -07 000000467 INF: FPGA: Recv ZSGSRD 29466
17-03-18 03:17:36.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.074 -07 000000502 INF: FPGA: Recv ZSGSRD 29457
17-03-18 03:17:36.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.084 -07 000000561 INF: FPGA: Recv ZSGSRD 29463
17-03-18 03:17:36.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.094 -07 000000424 INF: FPGA: Recv ZSGSRD 29466
17-03-18 03:17:36.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.104 -07 000000629 INF: FPGA: Recv ZSGSRD 29461
17-03-18 03:17:36.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.114 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:36.114 -07 000000455 INF: FPGA: Recv ZPIEZORD 24987
17-03-18 03:17:36.124 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.124 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.320 V. Piezo Error = -9.8 V.
17-03-18 03:17:36.124 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.6 um, Read 10 ADC samples: Avg = 29462 (-128.8 uncal um), Error = 0.8 uncal um, Median = 29462 (-128.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29456 (-128.8 uncal um), Max = 29466 (-128.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:36.124 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29462, posNoise = 4, negNoise = 6
17-03-18 03:17:36.124 -07 000000610 INF: Z Motor: After move to -0.129604, error = 0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:36.124 -07 000000610 INF: Z Motor: Settle wait time = 1450 ms, measure time = 108 ms (allowed 150 ms), total time = 1558 ms
17-03-18 03:17:36.124 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:36.174 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-18 03:17:36.174 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:36.174 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.129593490131696. ----------
17-03-18 03:17:36.174 -07 000000610 INF: Cycle	110	Tile	14	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:36.174 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28136, sync = True, waitForSettling = True)
17-03-18 03:17:36.174 -07 000000610 INF: Z Motor: Moving to -0.128798 mm, started at -0.129593 mm, distance = 0.80 um
17-03-18 03:17:36.174 -07 000000610 INF: FPGA: Xmit ZDACW 28136\n [Z Motor]
17-03-18 03:17:36.174 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:17:36.184 -07 000000610 INF: FPGA: 'ZDACW 28136' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:17:36.184 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:36.184 -07 000000590 INF: FPGA: Recv ZDACR 28136
17-03-18 03:17:36.194 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.194 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:36.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.344 -07 000000467 INF: FPGA: Recv ZSGSRD 29337
17-03-18 03:17:36.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 7 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.354 -07 000000626 INF: FPGA: Recv ZSGSRD 29336
17-03-18 03:17:36.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.364 -07 000000579 INF: FPGA: Recv ZSGSRD 29344
17-03-18 03:17:36.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.374 -07 000000461 INF: FPGA: Recv ZSGSRD 29339
17-03-18 03:17:36.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.384 -07 000000576 INF: FPGA: Recv ZSGSRD 29336
17-03-18 03:17:36.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.394 -07 000000462 INF: FPGA: Recv ZSGSRD 29342
17-03-18 03:17:36.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.404 -07 000000501 INF: FPGA: Recv ZSGSRD 29341
17-03-18 03:17:36.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.414 -07 000000444 INF: FPGA: Recv ZSGSRD 29341
17-03-18 03:17:36.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.424 -07 000000561 INF: FPGA: Recv ZSGSRD 29342
17-03-18 03:17:36.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:36.434 -07 000000512 INF: FPGA: Recv ZSGSRD 29336
17-03-18 03:17:36.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.444 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:36.444 -07 000000467 INF: FPGA: Recv ZPIEZORD 24820
17-03-18 03:17:36.454 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:36.454 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.293 V. Piezo Error = -9.9 V.
17-03-18 03:17:36.454 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29339 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29340 (-128.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29336 (-128.0 uncal um), Max = 29344 (-128.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:17:36.454 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29339, posNoise = 5, negNoise = 3
17-03-18 03:17:36.454 -07 000000610 INF: Z Motor: After move to -0.128798, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:36.454 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:17:36.454 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:36.454 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:36.454 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:36.454 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:36.454 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:36.454 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:36.454 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:36.454 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:36.454 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:36.454 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:36.454 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:36.454 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:36.454 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:17:36.454 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:36.464 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 5 ms.
17-03-18 03:17:36.464 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:36.474 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:17:36.474 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:17:36.474 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:17:36.474 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:36.474 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28312 150\n [Camera]
17-03-18 03:17:36.564 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:36.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:36.674 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:37.084 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:37.084 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:37.084 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:37.084 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:37.084 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) start.
17-03-18 03:17:37.084 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:37.084 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:37.084 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:37.084 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:37.084 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) start.
17-03-18 03:17:37.274 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28312 788
17-03-18 03:17:37.424 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:37.454 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:17:37.454 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:17:37.454 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:37.464 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:17:37.464 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:17:37.464 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:37.464 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:37.464 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:17:37.464 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:37.474 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:17:37.614 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:37.614 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:37.624 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:37.624 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:37.624 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:17:37.624 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:37.624 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:37.624 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:37.744 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:37.744 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 575712736, 0x0, 418435064) start.
17-03-18 03:17:37.814 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:17:37.814 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:37.814 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28312 150' command took 2 ms to send, 1320 ms to get response, and 1331 ms overall
17-03-18 03:17:37.814 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.129453
17-03-18 03:17:37.814 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.12945 mm
17-03-18 03:17:37.814 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:37.814 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:17:37.814 -07 000000502 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 03:17:37.814 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:37.814 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 28279, sync = True, waitForSettling = False)
17-03-18 03:17:37.814 -07 000000618 INF: Z Motor: Moving to -0.129453 mm, started at -0.128803 mm, distance = -0.65 um
17-03-18 03:17:37.814 -07 000000591 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:17:37.824 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:37.824 -07 000000502 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:37.824 -07 000000502 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:37.824 -07 000000502 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:17:37.824 -07 000000618 INF: FPGA: Xmit ZDACW 28279\n [Z Motor]
17-03-18 03:17:37.824 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:17:37.834 -07 000000618 INF: FPGA: 'ZDACW 28279' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:17:37.834 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:37.834 -07 000000561 INF: FPGA: Recv ZDACR 28279
17-03-18 03:17:37.844 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:37.844 -07 000000618 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 03:17:37.844 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:38.004 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:17:38.004 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:17:38.004 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:38.014 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:38.014 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:17:38.114 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 575712736, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:17:38.114 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:17:38.114 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:38.114 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:38.124 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 502 ms.
17-03-18 03:17:38.224 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:17:38.224 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 401 ms overall
17-03-18 03:17:38.264 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:38.274 -07 000000591 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:17:38.274 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:17:38.274 -07 000000502 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:38.274 -07 000000502 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:17:38.274 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 401 ms, distance = 0.844 mm, average velocity = 2.105 mm/sec
17-03-18 03:17:39.224 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:39.224 -07 000000455 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:17:39.234 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:39.234 -07 000000502 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:39.254 -07 000000502 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:39.254 -07 000000502 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:17:39.254 -07 000000502 INF: Y Motor: Moved to 71.5190 after 1442 ms (table move)
17-03-18 03:17:39.264 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129453 mm (DAC = 28279)
17-03-18 03:17:39.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.264 -07 000000569 INF: FPGA: Recv ZSGSRD 29444
17-03-18 03:17:39.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:39.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.274 -07 000000590 INF: FPGA: Recv ZSGSRD 29437
17-03-18 03:17:39.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.284 -07 000000461 INF: FPGA: Recv ZSGSRD 29434
17-03-18 03:17:39.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.294 -07 000000579 INF: FPGA: Recv ZSGSRD 29437
17-03-18 03:17:39.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:39.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.304 -07 000000606 INF: FPGA: Recv ZSGSRD 29435
17-03-18 03:17:39.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.314 -07 000000461 INF: FPGA: Recv ZSGSRD 29443
17-03-18 03:17:39.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.324 -07 000000467 INF: FPGA: Recv ZSGSRD 29449
17-03-18 03:17:39.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.334 -07 000000569 INF: FPGA: Recv ZSGSRD 29445
17-03-18 03:17:39.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.344 -07 000000590 INF: FPGA: Recv ZSGSRD 29439
17-03-18 03:17:39.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.354 -07 000000561 INF: FPGA: Recv ZSGSRD 29442
17-03-18 03:17:39.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.364 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:39.364 -07 000000618 INF: FPGA: Recv ZPIEZORD 24998
17-03-18 03:17:39.374 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.374 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.315 V. Piezo Error = -9.7 V.
17-03-18 03:17:39.374 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.5 um, Read 10 ADC samples: Avg = 29440 (-128.7 uncal um), Error = 0.8 uncal um, Median = 29440 (-128.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29434 (-128.6 uncal um), Max = 29449 (-128.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:39.374 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29440, posNoise = 9, negNoise = 6
17-03-18 03:17:39.374 -07 000000610 INF: Z Motor: After move to -0.129453, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:39.374 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 109 ms (allowed 150 ms), total time = 1553 ms
17-03-18 03:17:39.374 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:39.424 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms
17-03-18 03:17:39.424 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:39.424 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.129452157464578. ----------
17-03-18 03:17:39.424 -07 000000610 INF: Cycle	110	Tile	15	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:39.424 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28102, sync = True, waitForSettling = True)
17-03-18 03:17:39.424 -07 000000610 INF: Z Motor: Moving to -0.128643 mm, started at -0.129452 mm, distance = 0.81 um
17-03-18 03:17:39.424 -07 000000610 INF: FPGA: Xmit ZDACW 28102\n [Z Motor]
17-03-18 03:17:39.424 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:17:39.434 -07 000000610 INF: FPGA: 'ZDACW 28102' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:39.434 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:39.434 -07 000000576 INF: FPGA: Recv ZDACR 28102
17-03-18 03:17:39.444 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.444 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:39.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.594 -07 000000467 INF: FPGA: Recv ZSGSRD 29316
17-03-18 03:17:39.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.604 -07 000000569 INF: FPGA: Recv ZSGSRD 29314
17-03-18 03:17:39.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.614 -07 000000579 INF: FPGA: Recv ZSGSRD 29315
17-03-18 03:17:39.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.624 -07 000000455 INF: FPGA: Recv ZSGSRD 29318
17-03-18 03:17:39.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.634 -07 000000591 INF: FPGA: Recv ZSGSRD 29315
17-03-18 03:17:39.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.644 -07 000000462 INF: FPGA: Recv ZSGSRD 29316
17-03-18 03:17:39.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.654 -07 000000430 INF: FPGA: Recv ZSGSRD 29314
17-03-18 03:17:39.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.664 -07 000000576 INF: FPGA: Recv ZSGSRD 29315
17-03-18 03:17:39.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.674 -07 000000579 INF: FPGA: Recv ZSGSRD 29308
17-03-18 03:17:39.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:39.684 -07 000000561 INF: FPGA: Recv ZSGSRD 29313
17-03-18 03:17:39.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.694 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:39.694 -07 000000591 INF: FPGA: Recv ZPIEZORD 24797
17-03-18 03:17:39.704 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:39.704 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.288 V. Piezo Error = -9.9 V.
17-03-18 03:17:39.704 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29314 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29315 (-127.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29308 (-127.8 uncal um), Max = 29318 (-127.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:39.704 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29314, posNoise = 4, negNoise = 6
17-03-18 03:17:39.704 -07 000000610 INF: Z Motor: After move to -0.128643, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:39.704 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:17:39.704 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:39.704 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:39.704 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:39.704 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:39.704 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:39.704 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:39.704 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:39.704 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:39.704 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:39.704 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:39.704 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:39.704 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:39.714 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:17:39.714 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:39.714 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:39.714 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:39.724 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:17:39.724 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:39.724 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:17:39.724 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:39.734 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28279 150\n [Camera]
17-03-18 03:17:39.934 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:40.334 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:40.334 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:40.334 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:40.334 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:40.334 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:40.334 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:40.334 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:40.334 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) start.
17-03-18 03:17:40.334 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:40.334 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:17:40.524 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28279 788
17-03-18 03:17:40.674 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:40.714 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:17:40.714 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:17:40.714 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:40.714 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:40.714 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:17:40.724 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:17:40.724 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:17:40.724 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:40.724 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:40.734 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:17:40.874 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:40.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:40.874 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:40.874 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:40.874 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) start.
17-03-18 03:17:40.874 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:40.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:40.874 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:40.874 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:40.874 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:17:41.024 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.988112,
17-03-18 03:17:41.064 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:17:41.064 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:41.064 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28279 150' command took 2 ms to send, 1322 ms to get response, and 1331 ms overall
17-03-18 03:17:41.064 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.128986
17-03-18 03:17:41.064 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.12899 mm
17-03-18 03:17:41.064 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:41.064 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 28177, sync = True, waitForSettling = False)
17-03-18 03:17:41.064 -07 000000455 INF: Z Motor: Moving to -0.128986 mm, started at -0.128643 mm, distance = -0.34 um
17-03-18 03:17:41.064 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:17:41.064 -07 000000512 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-18 03:17:41.064 -07 000000455 INF: FPGA: Xmit ZDACW 28177\n [Z Motor]
17-03-18 03:17:41.074 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:41.074 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:17:41.074 -07 000000455 INF: FPGA: 'ZDACW 28177' command took 1 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:41.074 -07 000000629 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:17:41.084 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:17:41.084 -07 000000512 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:41.084 -07 000000512 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:41.084 -07 000000512 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:17:41.084 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:41.084 -07 000000626 INF: FPGA: Recv ZDACR 28177
17-03-18 03:17:41.094 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:17:41.094 -07 000000455 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 03:17:41.094 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:41.254 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:17:41.254 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:17:41.254 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:41.254 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:17:41.254 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:17:41.254 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:41.254 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:41.254 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:17:41.254 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:41.264 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:17:41.464 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-18 03:17:41.464 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:17:41.514 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:41.514 -07 000000618 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:17:41.524 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:17:41.524 -07 000000512 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:41.524 -07 000000512 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 03:17:41.524 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.174 mm/sec
17-03-18 03:17:41.564 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:41.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:42.474 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:42.474 -07 000000626 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:17:42.484 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.484 -07 000000512 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:42.504 -07 000000512 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:42.504 -07 000000512 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:17:42.504 -07 000000512 INF: Y Motor: Moved to 72.3496 after 1442 ms (table move)
17-03-18 03:17:42.514 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128986 mm (DAC = 28177)
17-03-18 03:17:42.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.514 -07 000000591 INF: FPGA: Recv ZSGSRD 29373
17-03-18 03:17:42.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:17:42.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.524 -07 000000467 INF: FPGA: Recv ZSGSRD 29372
17-03-18 03:17:42.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.534 -07 000000579 INF: FPGA: Recv ZSGSRD 29365
17-03-18 03:17:42.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:42.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.544 -07 000000561 INF: FPGA: Recv ZSGSRD 29375
17-03-18 03:17:42.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.554 -07 000000462 INF: FPGA: Recv ZSGSRD 29368
17-03-18 03:17:42.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.564 -07 000000590 INF: FPGA: Recv ZSGSRD 29372
17-03-18 03:17:42.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.574 -07 000000576 INF: FPGA: Recv ZSGSRD 29371
17-03-18 03:17:42.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.584 -07 000000579 INF: FPGA: Recv ZSGSRD 29364
17-03-18 03:17:42.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.594 -07 000000591 INF: FPGA: Recv ZSGSRD 29366
17-03-18 03:17:42.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.604 -07 000000430 INF: FPGA: Recv ZSGSRD 29372
17-03-18 03:17:42.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.614 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:42.614 -07 000000461 INF: FPGA: Recv ZPIEZORD 24923
17-03-18 03:17:42.624 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.624 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.300 V. Piezo Error = -9.8 V.
17-03-18 03:17:42.624 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.0 um, Read 10 ADC samples: Avg = 29370 (-128.2 uncal um), Error = 0.8 uncal um, Median = 29372 (-128.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29364 (-128.2 uncal um), Max = 29375 (-128.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:42.624 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29370, posNoise = 5, negNoise = 6
17-03-18 03:17:42.624 -07 000000610 INF: Z Motor: After move to -0.128986, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:42.624 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 109 ms (allowed 150 ms), total time = 1553 ms
17-03-18 03:17:42.624 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:42.674 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 03:17:42.674 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:42.674 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.129002462614654. ----------
17-03-18 03:17:42.674 -07 000000610 INF: Cycle	110	Tile	16	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:42.674 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28000, sync = True, waitForSettling = True)
17-03-18 03:17:42.674 -07 000000610 INF: Z Motor: Moving to -0.128176 mm, started at -0.129002 mm, distance = 0.83 um
17-03-18 03:17:42.674 -07 000000610 INF: FPGA: Xmit ZDACW 28000\n [Z Motor]
17-03-18 03:17:42.674 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:17:42.684 -07 000000610 INF: FPGA: 'ZDACW 28000' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:42.684 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:42.684 -07 000000590 INF: FPGA: Recv ZDACR 28000
17-03-18 03:17:42.694 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:42.694 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:42.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.844 -07 000000629 INF: FPGA: Recv ZSGSRD 29246
17-03-18 03:17:42.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:42.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.854 -07 000000579 INF: FPGA: Recv ZSGSRD 29242
17-03-18 03:17:42.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.864 -07 000000618 INF: FPGA: Recv ZSGSRD 29238
17-03-18 03:17:42.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.874 -07 000000430 INF: FPGA: Recv ZSGSRD 29248
17-03-18 03:17:42.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.884 -07 000000461 INF: FPGA: Recv ZSGSRD 29239
17-03-18 03:17:42.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.894 -07 000000467 INF: FPGA: Recv ZSGSRD 29246
17-03-18 03:17:42.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.904 -07 000000569 INF: FPGA: Recv ZSGSRD 29242
17-03-18 03:17:42.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.914 -07 000000461 INF: FPGA: Recv ZSGSRD 29242
17-03-18 03:17:42.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.924 -07 000000591 INF: FPGA: Recv ZSGSRD 29242
17-03-18 03:17:42.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:42.934 -07 000000455 INF: FPGA: Recv ZSGSRD 29234
17-03-18 03:17:42.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.944 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:42.944 -07 000000618 INF: FPGA: Recv ZPIEZORD 24755
17-03-18 03:17:42.954 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:42.954 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.273 V. Piezo Error = -9.8 V.
17-03-18 03:17:42.954 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.2 um, Read 10 ADC samples: Avg = 29242 (-127.4 uncal um), Error = 0.8 uncal um, Median = 29242 (-127.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29234 (-127.4 uncal um), Max = 29248 (-127.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:17:42.954 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29242, posNoise = 6, negNoise = 8
17-03-18 03:17:42.954 -07 000000610 INF: Z Motor: After move to -0.128176, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:42.954 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:17:42.954 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:42.954 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:42.954 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:42.954 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:42.954 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:42.954 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:42.954 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:42.954 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:42.954 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:42.954 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:42.954 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:42.954 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:42.964 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:42.964 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:42.964 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:17:42.964 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:42.974 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:17:42.974 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:17:42.974 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:17:42.974 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:17:42.974 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28177 150\n [Camera]
17-03-18 03:17:43.174 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:43.584 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:43.584 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:43.584 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:43.584 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:43.584 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 03:17:43.584 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:43.584 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:43.584 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:43.584 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:43.584 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:17:43.774 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28177 788
17-03-18 03:17:43.924 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:43.954 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:17:43.954 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:17:43.954 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:43.964 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:17:43.964 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:17:43.964 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:43.964 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:43.964 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:43.964 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:17:43.964 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:17:44.114 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:44.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:44.114 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:44.114 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:44.124 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:17:44.124 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:44.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:44.124 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:44.124 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:44.124 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:17:44.314 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:17:44.314 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:44.314 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28177 150' command took 2 ms to send, 1320 ms to get response, and 1331 ms overall
17-03-18 03:17:44.314 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:17:44.314 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.349609375, Z-Position -0.128180163460509. ------
17-03-18 03:17:44.314 -07 000000424 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.13474 mm
17-03-18 03:17:44.314 -07 000000424 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:44.314 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:17:44.324 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:17:44.324 -07 000000626 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 03:17:44.324 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:44.324 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 29434, sync = True, waitForSettling = False)
17-03-18 03:17:44.324 -07 000000579 INF: Z Motor: Moving to -0.134740 mm, started at -0.128180 mm, distance = -6.56 um
17-03-18 03:17:44.324 -07 000000430 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:17:44.324 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:17:44.324 -07 000000569 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:17:44.334 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:44.334 -07 000000626 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:44.334 -07 000000626 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:44.334 -07 000000626 INF: Y Motor: Moving 1349 steps-27
17-03-18 03:17:44.334 -07 000000606 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:17:44.344 -07 000000579 INF: FPGA: Xmit ZDACW 29434\n [Z Motor]
17-03-18 03:17:44.344 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:17:44.354 -07 000000579 INF: FPGA: 'ZDACW 29434' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:17:44.354 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:44.364 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:44.364 -07 000000444 INF: FPGA: Recv ZDACR 29434
17-03-18 03:17:44.374 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:17:44.374 -07 000000579 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-18 03:17:44.504 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:17:44.504 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:17:44.504 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:44.504 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:17:44.504 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:17:44.504 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:44.504 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:17:44.504 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:17:44.504 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:17:44.514 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:17:44.534 -07 000000430 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:17:44.534 -07 000000606 INF: FPGA: 'FOCMRRFOC' command took 2 ms to send, 194 ms to get response, and 212 ms overall
17-03-18 03:17:44.734 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:17:44.734 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 400 ms overall
17-03-18 03:17:44.774 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:44.784 -07 000000461 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:17:44.784 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:17:44.784 -07 000000626 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:44.784 -07 000000626 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 03:17:44.784 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.843 mm, average velocity = 2.107 mm/sec
17-03-18 03:17:45.734 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:45.734 -07 000000502 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:17:45.744 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:45.744 -07 000000626 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:45.774 -07 000000626 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:45.774 -07 000000626 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:17:45.774 -07 000000626 INF: Y Motor: Moved to 73.1763 after 1451 ms (table move)
17-03-18 03:17:45.774 -07 000000424 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134740 mm (DAC = 29434)
17-03-18 03:17:45.774 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:45.774 -07 000000591 INF: FPGA: Recv ZSGSRD 30266
17-03-18 03:17:45.784 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:45.784 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:45.784 -07 000000444 INF: FPGA: Recv ZSGSRD 30259
17-03-18 03:17:45.794 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:45.794 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:45.794 -07 000000462 INF: FPGA: Recv ZSGSRD 30260
17-03-18 03:17:45.804 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:45.804 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:45.804 -07 000000579 INF: FPGA: Recv ZSGSRD 30258
17-03-18 03:17:45.814 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:45.814 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:45.814 -07 000000455 INF: FPGA: Recv ZSGSRD 30262
17-03-18 03:17:45.824 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:45.824 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:45.824 -07 000000606 INF: FPGA: Recv ZSGSRD 30271
17-03-18 03:17:45.834 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:45.854 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:45.854 -07 000000501 INF: FPGA: Recv ZSGSRD 30264
17-03-18 03:17:45.864 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:17:45.864 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:45.864 -07 000000629 INF: FPGA: Recv ZSGSRD 30258
17-03-18 03:17:45.874 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:45.884 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:45.884 -07 000000462 INF: FPGA: Recv ZSGSRD 30262
17-03-18 03:17:45.894 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:17:45.894 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:45.894 -07 000000444 INF: FPGA: Recv ZSGSRD 30266
17-03-18 03:17:45.904 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:45.924 -07 000000424 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:45.924 -07 000000462 INF: FPGA: Recv ZPIEZORD 26104
17-03-18 03:17:45.934 -07 000000424 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:17:45.934 -07 000000424 INF: Z Motor: Piezo is near 35.8 V (nominally 0 to 100 V), expect near 44.9 V, since DAC is at 4.491 V. Piezo Error = -9.1 V.
17-03-18 03:17:45.934 -07 000000424 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.7 um, Read 10 ADC samples: Avg = 30263 (-133.9 uncal um), Error = 0.8 uncal um, Median = 30262 (-133.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 30258 (-133.9 uncal um), Max = 30271 (-134.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:17:45.934 -07 000000424 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30263, posNoise = 8, negNoise = 5
17-03-18 03:17:45.934 -07 000000424 INF: Z Motor: After move to -0.134740, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:45.934 -07 000000424 INF: Z Motor: Settle wait time = 1454 ms, measure time = 155 ms (allowed 150 ms), total time = 1609 ms
17-03-18 03:17:45.934 -07 000000424 INF: Z Motor: Warning: Actual position measuring time = 155 ms, longer than max expected time of 150 ms
17-03-18 03:17:45.934 -07 000000424 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1613 ms
17-03-18 03:17:45.934 -07 000000424 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:45.934 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:45.934 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:45.934 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:45.934 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:45.934 -07 000000629 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:17:45.934 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:45.934 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:45.934 -07 000000629 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:17:45.944 -07 000000629 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:17:45.944 -07 000000629 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:17:45.954 -07 000000629 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:17:45.954 -07 000000629 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 03:17:45.954 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:17:46.004 -07 000000502 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:17:46.304 -07 000000569 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:17:46.304 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:17:46.304 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:17:46.424 -07 000000629 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:17:46.444 -07 000000629 INF: FPGA: Recv CAMSNAP
17-03-18 03:17:46.444 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 480 ms to get response, and 483 ms overall
17-03-18 03:17:46.444 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611135000, 0x0, 559484976) start.
17-03-18 03:17:46.444 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.994908,
17-03-18 03:17:46.564 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:46.564 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611135000, 0x0, 559484976) end. Duration was 135 ms.
17-03-18 03:17:46.564 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:46.564 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:17:46.564 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 261 ms.
17-03-18 03:17:46.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:46.644 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:17:46.644 -07 000000579 INF: Autofocus start
17-03-18 03:17:46.644 -07 000000579 INF: MeasureProfile start
17-03-18 03:17:46.644 -07 000000430 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:17:46.654 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:17:46.654 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:17:46.654 -07 000000579 INF: MeasureProfile done
17-03-18 03:17:46.654 -07 000000579 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:17:46.654 -07 000000579 INF: Autofocus finished
17-03-18 03:17:46.854 -07 000000606 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:17:46.854 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:17:46.854 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.134739284057247. ----------
17-03-18 03:17:46.854 -07 000000610 INF: Cycle	110	Tile	17	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:46.864 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27941, sync = True, waitForSettling = True)
17-03-18 03:17:46.864 -07 000000610 INF: Z Motor: Moving to -0.127906 mm, started at -0.134739 mm, distance = 6.83 um
17-03-18 03:17:46.864 -07 000000610 INF: FPGA: Xmit ZDACW 27941\n [Z Motor]
17-03-18 03:17:46.864 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:17:46.874 -07 000000610 INF: FPGA: 'ZDACW 27941' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:46.874 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:46.874 -07 000000444 INF: FPGA: Recv ZDACR 27941
17-03-18 03:17:46.884 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:46.884 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:47.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:47.034 -07 000000502 INF: FPGA: Recv ZSGSRD 29198
17-03-18 03:17:47.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:47.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:47.044 -07 000000606 INF: FPGA: Recv ZSGSRD 29205
17-03-18 03:17:47.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:47.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:47.054 -07 000000430 INF: FPGA: Recv ZSGSRD 29199
17-03-18 03:17:47.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:47.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:47.064 -07 000000462 INF: FPGA: Recv ZSGSRD 29200
17-03-18 03:17:47.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:47.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:47.074 -07 000000590 INF: FPGA: Recv ZSGSRD 29206
17-03-18 03:17:47.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:47.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:47.084 -07 000000430 INF: FPGA: Recv ZSGSRD 29202
17-03-18 03:17:47.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:47.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:47.094 -07 000000502 INF: FPGA: Recv ZSGSRD 29203
17-03-18 03:17:47.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:47.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:47.104 -07 000000444 INF: FPGA: Recv ZSGSRD 29199
17-03-18 03:17:47.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:47.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:47.114 -07 000000626 INF: FPGA: Recv ZSGSRD 29198
17-03-18 03:17:47.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:47.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:47.124 -07 000000501 INF: FPGA: Recv ZSGSRD 29205
17-03-18 03:17:47.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:47.134 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:47.134 -07 000000455 INF: FPGA: Recv ZPIEZORD 24662
17-03-18 03:17:47.144 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:47.144 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.264 V. Piezo Error = -10.0 V.
17-03-18 03:17:47.144 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.9 um, Read 10 ADC samples: Avg = 29202 (-127.1 uncal um), Error = 0.8 uncal um, Median = 29201 (-127.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29198 (-127.1 uncal um), Max = 29206 (-127.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:17:47.144 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29202, posNoise = 4, negNoise = 4
17-03-18 03:17:47.144 -07 000000610 INF: Z Motor: After move to -0.127906, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:47.144 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 03:17:47.144 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:47.144 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:47.144 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:47.144 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:47.144 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:47.144 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:47.144 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:47.144 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:47.144 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:47.144 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:47.144 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:47.144 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:47.154 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:17:47.154 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:47.154 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:47.154 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:47.164 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 03:17:47.164 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:17:47.164 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:17:47.164 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:47.174 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28118 150\n [Camera]
17-03-18 03:17:47.374 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:47.774 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:47.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:47.774 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:47.774 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:47.774 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:47.774 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:47.774 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:47.774 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) start.
17-03-18 03:17:47.774 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:47.774 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:17:47.964 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28118 788
17-03-18 03:17:48.114 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:48.154 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:17:48.154 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:17:48.154 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:48.154 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:17:48.154 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:17:48.154 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:48.154 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:48.154 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:17:48.154 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:48.164 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:17:48.314 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:48.314 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:48.314 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:48.314 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:48.314 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:48.314 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) start.
17-03-18 03:17:48.314 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:48.314 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:48.314 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:48.314 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:17:48.504 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:17:48.504 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:48.504 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28118 150' command took 2 ms to send, 1322 ms to get response, and 1331 ms overall
17-03-18 03:17:48.624 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128262
17-03-18 03:17:48.624 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12826 mm
17-03-18 03:17:48.624 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:48.624 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:17:48.624 -07 000000455 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-18 03:17:48.624 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:48.624 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 28019, sync = True, waitForSettling = False)
17-03-18 03:17:48.624 -07 000000501 INF: Z Motor: Moving to -0.128263 mm, started at -0.127923 mm, distance = -0.34 um
17-03-18 03:17:48.624 -07 000000462 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:17:48.634 -07 000000501 INF: FPGA: Xmit ZDACW 28019\n [Z Motor]
17-03-18 03:17:48.634 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:17:48.634 -07 000000455 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:48.634 -07 000000455 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:48.634 -07 000000455 INF: Y Motor: Moving 1354 steps-33
17-03-18 03:17:48.634 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:17:48.644 -07 000000501 INF: FPGA: 'ZDACW 28019' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:17:48.644 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:48.644 -07 000000618 INF: FPGA: Recv ZDACR 28019
17-03-18 03:17:48.654 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:48.654 -07 000000501 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 03:17:48.654 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:48.704 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 388 ms.
17-03-18 03:17:48.704 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:17:48.704 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:48.704 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) end. Duration was 390 ms.
17-03-18 03:17:48.704 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:17:48.704 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:48.704 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:17:48.714 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:17:48.714 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:17:48.714 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:17:49.024 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:17:49.024 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 398 ms overall
17-03-18 03:17:49.064 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:49.074 -07 000000512 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:17:49.074 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:49.074 -07 000000455 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:49.074 -07 000000455 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:17:49.074 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.846 mm, average velocity = 2.126 mm/sec
17-03-18 03:17:50.024 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:50.024 -07 000000501 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:17:50.034 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:50.034 -07 000000455 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:50.054 -07 000000455 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:50.054 -07 000000455 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:17:50.054 -07 000000455 INF: Y Motor: Moved to 74.0083 after 1429 ms (table move)
17-03-18 03:17:50.054 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128263 mm (DAC = 28019)
17-03-18 03:17:50.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.054 -07 000000576 INF: FPGA: Recv ZSGSRD 29248
17-03-18 03:17:50.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:17:50.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.064 -07 000000561 INF: FPGA: Recv ZSGSRD 29253
17-03-18 03:17:50.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.074 -07 000000590 INF: FPGA: Recv ZSGSRD 29252
17-03-18 03:17:50.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.084 -07 000000462 INF: FPGA: Recv ZSGSRD 29262
17-03-18 03:17:50.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.094 -07 000000569 INF: FPGA: Recv ZSGSRD 29257
17-03-18 03:17:50.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.104 -07 000000430 INF: FPGA: Recv ZSGSRD 29258
17-03-18 03:17:50.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.114 -07 000000512 INF: FPGA: Recv ZSGSRD 29259
17-03-18 03:17:50.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.124 -07 000000424 INF: FPGA: Recv ZSGSRD 29254
17-03-18 03:17:50.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.134 -07 000000501 INF: FPGA: Recv ZSGSRD 29250
17-03-18 03:17:50.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.144 -07 000000569 INF: FPGA: Recv ZSGSRD 29253
17-03-18 03:17:50.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.154 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:50.154 -07 000000467 INF: FPGA: Recv ZPIEZORD 24801
17-03-18 03:17:50.164 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.164 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.275 V. Piezo Error = -9.8 V.
17-03-18 03:17:50.164 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.3 um, Read 10 ADC samples: Avg = 29255 (-127.5 uncal um), Error = 0.8 uncal um, Median = 29254 (-127.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29248 (-127.4 uncal um), Max = 29262 (-127.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:17:50.164 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29255, posNoise = 7, negNoise = 7
17-03-18 03:17:50.164 -07 000000610 INF: Z Motor: After move to -0.128263, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:50.164 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 105 ms (allowed 150 ms), total time = 1536 ms
17-03-18 03:17:50.164 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:50.214 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1587 ms
17-03-18 03:17:50.214 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:50.214 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.128263678218352. ----------
17-03-18 03:17:50.214 -07 000000610 INF: Cycle	110	Tile	18	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:50.214 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27842, sync = True, waitForSettling = True)
17-03-18 03:17:50.214 -07 000000610 INF: Z Motor: Moving to -0.127453 mm, started at -0.128264 mm, distance = 0.81 um
17-03-18 03:17:50.214 -07 000000610 INF: FPGA: Xmit ZDACW 27842\n [Z Motor]
17-03-18 03:17:50.214 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:17:50.224 -07 000000610 INF: FPGA: 'ZDACW 27842' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:50.224 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:50.224 -07 000000626 INF: FPGA: Recv ZDACR 27842
17-03-18 03:17:50.234 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.234 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:50.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.384 -07 000000462 INF: FPGA: Recv ZSGSRD 29135
17-03-18 03:17:50.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:50.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.394 -07 000000618 INF: FPGA: Recv ZSGSRD 29136
17-03-18 03:17:50.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.404 -07 000000430 INF: FPGA: Recv ZSGSRD 29130
17-03-18 03:17:50.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.414 -07 000000512 INF: FPGA: Recv ZSGSRD 29124
17-03-18 03:17:50.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.424 -07 000000424 INF: FPGA: Recv ZSGSRD 29129
17-03-18 03:17:50.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.434 -07 000000561 INF: FPGA: Recv ZSGSRD 29137
17-03-18 03:17:50.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.444 -07 000000626 INF: FPGA: Recv ZSGSRD 29133
17-03-18 03:17:50.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.454 -07 000000461 INF: FPGA: Recv ZSGSRD 29133
17-03-18 03:17:50.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.464 -07 000000576 INF: FPGA: Recv ZSGSRD 29132
17-03-18 03:17:50.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:50.474 -07 000000467 INF: FPGA: Recv ZSGSRD 29130
17-03-18 03:17:50.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.484 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:50.484 -07 000000462 INF: FPGA: Recv ZPIEZORD 24627
17-03-18 03:17:50.494 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:50.494 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.248 V. Piezo Error = -9.9 V.
17-03-18 03:17:50.494 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29132 (-126.7 uncal um), Error = 0.8 uncal um, Median = 29132 (-126.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29124 (-126.6 uncal um), Max = 29137 (-126.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:17:50.494 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29132, posNoise = 5, negNoise = 8
17-03-18 03:17:50.494 -07 000000610 INF: Z Motor: After move to -0.127453, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:50.494 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:17:50.494 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:50.494 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:50.494 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:50.494 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:50.494 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:50.494 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:50.494 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:50.494 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:50.494 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:17:50.494 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:50.494 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:17:50.494 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:50.504 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:17:50.504 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:50.504 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:50.504 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:50.514 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:17:50.514 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:17:50.514 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:17:50.514 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:17:50.514 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 28019 150\n [Camera]
17-03-18 03:17:50.714 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:51.114 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:51.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:51.114 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:51.114 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:51.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:51.124 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:51.124 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:17:51.124 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:51.124 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:51.124 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:17:51.304 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28019 788
17-03-18 03:17:51.464 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:17:51.494 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:17:51.504 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:17:51.504 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:51.504 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:51.504 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:17:51.504 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:17:51.504 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:51.504 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:51.504 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:17:51.514 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:17:51.564 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:51.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 109. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:51.654 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:51.654 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:51.654 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:51.654 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:51.654 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:17:51.654 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:51.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:51.654 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:51.654 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:51.654 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 03:17:51.804 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.999021,
17-03-18 03:17:51.844 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:17:51.844 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:51.844 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 28019 150' command took 2 ms to send, 1325 ms to get response, and 1331 ms overall
17-03-18 03:17:51.844 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.127460
17-03-18 03:17:51.844 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12746 mm
17-03-18 03:17:51.844 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:17:51.854 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:17:51.854 -07 000000579 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 03:17:51.854 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:51.854 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 27844, sync = True, waitForSettling = False)
17-03-18 03:17:51.854 -07 000000569 INF: Z Motor: Moving to -0.127462 mm, started at -0.127474 mm, distance = 0.01 um
17-03-18 03:17:51.854 -07 000000462 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:17:51.864 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:17:51.864 -07 000000579 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:51.864 -07 000000579 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:17:51.864 -07 000000579 INF: Y Motor: Moving 1351 steps-30
17-03-18 03:17:51.864 -07 000000569 INF: FPGA: Xmit ZDACW 27844\n [Z Motor]
17-03-18 03:17:51.864 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:17:51.874 -07 000000569 INF: FPGA: 'ZDACW 27844' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:17:51.874 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:17:51.884 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:51.884 -07 000000502 INF: FPGA: Recv ZDACR 27844
17-03-18 03:17:51.894 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:17:51.894 -07 000000569 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-18 03:17:52.054 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 03:17:52.054 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:17:52.054 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:52.064 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 03:17:52.064 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:52.064 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 03:17:52.064 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:17:52.064 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:52.064 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:52.074 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 03:17:52.244 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:17:52.254 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 389 ms overall
17-03-18 03:17:52.274 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:52.284 -07 000000467 INF: FPGA: Recv YRDPOS 153255
17-03-18 03:17:52.284 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:17:52.284 -07 000000579 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:52.284 -07 000000579 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-18 03:17:52.284 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.844 mm, average velocity = 2.170 mm/sec
17-03-18 03:17:53.234 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:53.234 -07 000000430 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:17:53.244 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:53.244 -07 000000579 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:53.254 -07 000000579 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:53.264 -07 000000579 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:17:53.264 -07 000000579 INF: Y Motor: Moved to 74.8320 after 1408 ms (table move)
17-03-18 03:17:53.264 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.127462 mm (DAC = 27844)
17-03-18 03:17:53.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.264 -07 000000502 INF: FPGA: Recv ZSGSRD 29136
17-03-18 03:17:53.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:17:53.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.274 -07 000000467 INF: FPGA: Recv ZSGSRD 29131
17-03-18 03:17:53.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.284 -07 000000569 INF: FPGA: Recv ZSGSRD 29126
17-03-18 03:17:53.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.294 -07 000000561 INF: FPGA: Recv ZSGSRD 29126
17-03-18 03:17:53.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.304 -07 000000455 INF: FPGA: Recv ZSGSRD 29133
17-03-18 03:17:53.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.314 -07 000000606 INF: FPGA: Recv ZSGSRD 29138
17-03-18 03:17:53.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.324 -07 000000591 INF: FPGA: Recv ZSGSRD 29136
17-03-18 03:17:53.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.334 -07 000000462 INF: FPGA: Recv ZSGSRD 29130
17-03-18 03:17:53.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.344 -07 000000430 INF: FPGA: Recv ZSGSRD 29134
17-03-18 03:17:53.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.354 -07 000000590 INF: FPGA: Recv ZSGSRD 29132
17-03-18 03:17:53.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.364 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:53.364 -07 000000569 INF: FPGA: Recv ZPIEZORD 24621
17-03-18 03:17:53.374 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.374 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.249 V. Piezo Error = -9.9 V.
17-03-18 03:17:53.374 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29132 (-126.7 uncal um), Error = 0.8 uncal um, Median = 29132 (-126.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29126 (-126.7 uncal um), Max = 29138 (-126.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:17:53.374 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29132, posNoise = 6, negNoise = 6
17-03-18 03:17:53.374 -07 000000610 INF: Z Motor: After move to -0.127462, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:53.374 -07 000000610 INF: Z Motor: Settle wait time = 1410 ms, measure time = 108 ms (allowed 150 ms), total time = 1518 ms
17-03-18 03:17:53.374 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:17:53.424 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1572 ms
17-03-18 03:17:53.424 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:17:53.424 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.127473500124915. ----------
17-03-18 03:17:53.424 -07 000000610 INF: Cycle	110	Tile	19	Exposure Settings		A	403	G	194	T	194	C	403
17-03-18 03:17:53.424 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27667, sync = True, waitForSettling = True)
17-03-18 03:17:53.424 -07 000000610 INF: Z Motor: Moving to -0.126651 mm, started at -0.127474 mm, distance = 0.82 um
17-03-18 03:17:53.424 -07 000000610 INF: FPGA: Xmit ZDACW 27667\n [Z Motor]
17-03-18 03:17:53.424 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:17:53.434 -07 000000610 INF: FPGA: 'ZDACW 27667' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:53.434 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:17:53.434 -07 000000579 INF: FPGA: Recv ZDACR 27667
17-03-18 03:17:53.444 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.444 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:17:53.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.594 -07 000000502 INF: FPGA: Recv ZSGSRD 29002
17-03-18 03:17:53.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:17:53.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.604 -07 000000618 INF: FPGA: Recv ZSGSRD 29003
17-03-18 03:17:53.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.614 -07 000000569 INF: FPGA: Recv ZSGSRD 29001
17-03-18 03:17:53.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.624 -07 000000576 INF: FPGA: Recv ZSGSRD 29003
17-03-18 03:17:53.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.634 -07 000000512 INF: FPGA: Recv ZSGSRD 29008
17-03-18 03:17:53.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.644 -07 000000424 INF: FPGA: Recv ZSGSRD 29009
17-03-18 03:17:53.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.654 -07 000000618 INF: FPGA: Recv ZSGSRD 29009
17-03-18 03:17:53.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.664 -07 000000455 INF: FPGA: Recv ZSGSRD 29008
17-03-18 03:17:53.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.674 -07 000000626 INF: FPGA: Recv ZSGSRD 28997
17-03-18 03:17:53.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:17:53.684 -07 000000444 INF: FPGA: Recv ZSGSRD 29001
17-03-18 03:17:53.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.694 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:17:53.694 -07 000000606 INF: FPGA: Recv ZPIEZORD 24492
17-03-18 03:17:53.704 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:53.704 -07 000000610 INF: Z Motor: Piezo is near 32.3 V (nominally 0 to 100 V), expect near 42.2 V, since DAC is at 4.222 V. Piezo Error = -9.9 V.
17-03-18 03:17:53.704 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.7 um, Read 10 ADC samples: Avg = 29004 (-125.9 uncal um), Error = 0.8 uncal um, Median = 29003 (-125.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 28997 (-125.8 uncal um), Max = 29009 (-125.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:17:53.704 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29004, posNoise = 5, negNoise = 7
17-03-18 03:17:53.704 -07 000000610 INF: Z Motor: After move to -0.126651, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:17:53.704 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:17:53.704 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:17:53.704 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:17:53.704 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:17:53.704 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:17:53.704 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:17:53.704 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:17:53.704 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:17:53.704 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:17:53.704 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:17:53.704 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:17:53.704 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:17:53.704 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:17:53.714 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:17:53.714 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:17:53.714 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:17:53.714 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:17:53.724 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:17:53.724 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:17:53.724 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:17:53.724 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:17:53.734 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 403 403 194 194 27844 150\n [Camera]
17-03-18 03:17:53.934 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:17:54.334 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 595
17-03-18 03:17:54.334 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 595
17-03-18 03:17:54.334 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 595
17-03-18 03:17:54.334 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 595
17-03-18 03:17:54.334 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:54.334 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:54.334 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:17:54.334 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:54.334 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:54.334 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 03:17:54.524 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27844 788
17-03-18 03:17:54.674 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:17:54.714 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:17:54.714 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:17:54.714 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:54.714 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:17:54.714 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:17:54.714 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:54.724 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:17:54.724 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:17:54.724 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:17:54.724 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:17:54.874 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:17:54.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:17:54.874 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:17:54.874 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:17:54.874 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 03:17:54.874 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:17:54.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:17:54.874 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:17:54.874 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:17:54.874 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:17:55.064 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:17:55.064 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:17:55.064 -07 000000610 INF: FPGA: 'CAMDBLSNAP 403 403 194 194 27844 150' command took 2 ms to send, 1322 ms to get response, and 1331 ms overall
17-03-18 03:17:55.254 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:17:55.254 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:17:55.254 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:55.254 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:17:55.254 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:17:55.254 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:17:55.264 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:17:55.264 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:17:55.264 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:17:55.264 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:17:55.274 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:17:55.304 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 41 ms.
17-03-18 03:17:55.304 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:17:55.344 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 03:17:55.364 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-18 03:17:55.364 -07 000000610 INF: Imaging Cycle 110: ScanTilesCommand Cycle 110 time end. Duration was 139924 ms.
17-03-18 03:17:55.364 -07 000000610 INF: =================== Cycle #110 ===================
17-03-18 03:17:55.364 -07 000000610 INF: ===================  ===================
17-03-18 03:17:55.364 -07 000000629 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:17:55.364 -07 000000462 INF: FPGA: Recv EXLED1ADCR 25
17-03-18 03:17:55.374 -07 000000629 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:17:55.374 -07 000000629 INF: GreenLED: Using Green data: Photodiode ADC 25 --> 0.0 mW (old method), or 1.8 mW (new method). Difference = 1.8 mW
17-03-18 03:17:55.374 -07 000000629 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 110, FrontChillerTemperature: 3.999021, FrontChillerHeatSinkTemperature: 0.447837, AmbientTemperature: 18.7603, FlowCellCompartmentTemperature: 21.98965, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.77038, GreenLEDSensorTemperature: 24.87704, PhotodiodePowerAdcGreen: 25, PhotodiodePowerMwGreen: 1.835864
17-03-18 03:17:55.454 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.