17-03-18 03:17:55.514 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:17:55.514 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-18 03:17:55.514 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8320 mm, delta = 0.5485 mm
17-03-18 03:17:55.514 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:55.514 -07 000000512 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:17:55.524 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:17:55.524 -07 000000610 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:55.524 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-18 03:17:55.524 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-18 03:17:55.524 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-18 03:17:55.634 -07 000000501 INF: FPGA: Recv YMVTO 154377 874
17-03-18 03:17:55.634 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 107 ms to get response, and 116 ms overall
17-03-18 03:17:55.634 -07 000000610 INF: Y Motor: Position error before settling = -2 encoder counts (-0.001 mm)
17-03-18 03:17:55.634 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.549 mm) should take 877 steps, but required 874 steps (0.546 mm). Slippage = -0.002 mm (0.00%).
17-03-18 03:17:55.634 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 116 ms, distance = 0.549 mm, average velocity = 4.729 mm/sec
17-03-18 03:17:56.564 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:17:56.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1606, R2=1674, Total=3280. Warn if over 250 bubbles per interval.
17-03-18 03:17:57.164 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.024884,
17-03-18 03:17:58.634 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:17:58.644 -07 000000591 INF: FPGA: Recv YRDPOS 154383
17-03-18 03:17:58.654 -07 000000610 INF: FPGA: 'YRDPOS' command took 11 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 03:17:58.654 -07 000000610 INF: Y Motor: Encoder = 154383 = motor step 120611.7 = 75.3823 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:17:58.664 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.001744, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:17:58.664 -07 000000610 INF: Y Motor: Position error after settling = 4 encoder counts (0.002 mm), Delta during settling = 6 counts (0.003 mm)
17-03-18 03:17:58.664 -07 000000610 INF: Y Motor: Moved to 75.3823 after 3156 ms
17-03-18 03:17:58.674 -07 000000610 INF: =================== Cycle #111, Flow Cell Temp 60° ===================
17-03-18 03:17:58.674 -07 000000610 INF: =================== Cycle #111, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-18 03:17:58.674 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-18 03:17:58.674 -07 000000626 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:17:58.684 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:17:58.684 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:17:58.684 -07 000000424 INF: FPGA: Recv TEC2EN 
17-03-18 03:17:58.694 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:17:58.694 -07 000000610 INF: =================== Cycle #111, Flow Cell Temp 60° ===================
17-03-18 03:17:58.694 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:17:58.694 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:17:58.694 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:17:58.724 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:17:58.724 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-18 03:17:58.724 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:17:59.024 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:17:59.044 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:17:59.044 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:17:59.094 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:17:59.114 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:17:59.114 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:17:59.214 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:17:59.214 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:17:59.214 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:17:59.244 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:17:59.244 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:17:59.244 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:17:59.374 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:17:59.414 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:01.564 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 3
17-03-18 03:18:01.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=3, R2=1, Total=4. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1609, R2=1675, Total=3284. Warn if over 250 bubbles per interval.
17-03-18 03:18:02.524 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.007176,
17-03-18 03:18:02.544 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:02.584 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:03.004 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:03.034 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:03.454 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:03.484 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:03.484 -07 000000610 INF: LanePump: Waited 4069 ms for pump motion to complete
17-03-18 03:18:03.484 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:18:03.614 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:03.644 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:18:03.644 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:18:03.774 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:03.804 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:18:03.804 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:18:03.804 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:18:03.934 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:18:03.964 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:04.394 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:04.424 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:04.424 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:18:04.424 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:18:05.644 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:18:05.644 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-18 03:18:05.644 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:18:05.664 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:18:05.664 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-18 03:18:05.664 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-18 03:18:05.794 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:18:05.814 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-18 03:18:05.814 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-18 03:18:05.864 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:18:05.884 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:18:05.884 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:18:05.984 -07 000000610 INF: =================== Cycle #111, Pumping Reagent CMS (4) ===================
17-03-18 03:18:05.984 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:18:05.984 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:06.014 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:18:06.014 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:18:06.014 -07 000000610 INF: =================== Cycle #111, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-18 03:18:06.144 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:18:06.184 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:06.564 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 4 R1 2
17-03-18 03:18:06.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=2, R2=4, Total=6. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1611, R2=1679, Total=3290. Warn if over 250 bubbles per interval.
17-03-18 03:18:07.624 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:07.654 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:07.894 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.996267,
17-03-18 03:18:08.074 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:08.104 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:08.104 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:18:08.104 -07 000000610 INF: =================== Cycle #111, Pumping Reagent CMS (4) ===================
17-03-18 03:18:08.234 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:08.264 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:18:08.264 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:18:08.394 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:08.424 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:18:08.424 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:18:08.424 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:18:08.554 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:18:08.584 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:09.014 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:09.044 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:09.044 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:18:09.044 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:18:10.264 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:18:10.264 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:18:10.264 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:18:10.284 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:18:10.284 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-18 03:18:10.284 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-18 03:18:10.434 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:18:10.454 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-18 03:18:10.454 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-18 03:18:10.504 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:18:10.524 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:18:10.524 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:18:10.624 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:18:10.624 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:18:10.624 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:10.654 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:18:10.654 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:18:10.654 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:18:10.784 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:18:10.824 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:11.564 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:18:11.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1611, R2=1679, Total=3290. Warn if over 250 bubbles per interval.
17-03-18 03:18:11.694 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:11.724 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:11.724 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:18:11.724 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:18:11.854 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:11.884 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:18:11.884 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:18:12.014 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:12.044 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:18:12.044 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:18:12.044 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:18:12.174 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:18:12.204 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:12.634 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:12.664 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:12.664 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:18:12.664 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:18:12.664 -07 000000590 INF: WaitCommand(10000) start
17-03-18 03:18:12.664 -07 000000462 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:18:12.664 -07 000000462 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:18:13.254 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.969015,
17-03-18 03:18:13.884 -07 000000462 INF: AsyncDelayTimer waited 1216ms
17-03-18 03:18:13.884 -07 000000462 INF: LanePump: Xmit /1?\r
17-03-18 03:18:13.914 -07 000000462 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:18:13.914 -07 000000462 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:18:14.044 -07 000000462 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:18:14.084 -07 000000462 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:15.614 -07 000000462 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:15.644 -07 000000462 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:16.064 -07 000000462 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:16.094 -07 000000462 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:16.094 -07 000000462 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:18:16.094 -07 000000462 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:18:16.094 -07 000000462 INF: ===================  ===================
17-03-18 03:18:16.564 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:18:16.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1611, R2=1679, Total=3290. Warn if over 250 bubbles per interval.
17-03-18 03:18:18.614 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.964938,
17-03-18 03:18:21.564 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:18:21.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1611, R2=1679, Total=3290. Warn if over 250 bubbles per interval.
17-03-18 03:18:22.674 -07 000000590 INF: WaitCommand(10000) end
17-03-18 03:18:22.674 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:18:22.674 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-18 03:18:22.674 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:22.704 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:18:22.704 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:18:22.704 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:18:22.834 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-18 03:18:22.874 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:23.974 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.98264,
17-03-18 03:18:26.564 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 5 R1 5
17-03-18 03:18:26.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=5, R2=5, Total=10. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1616, R2=1684, Total=3300. Warn if over 250 bubbles per interval.
17-03-18 03:18:29.004 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:29.034 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:29.334 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.975845,
17-03-18 03:18:29.454 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:29.484 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:29.904 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:29.934 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:30.354 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:30.384 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:30.804 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:30.834 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:30.834 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-18 03:18:30.834 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:18:30.964 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:30.994 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:18:30.994 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:18:31.124 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:31.154 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:18:31.154 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:18:31.154 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:18:31.284 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:18:31.314 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:31.564 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:18:31.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1616, R2=1684, Total=3300. Warn if over 250 bubbles per interval.
17-03-18 03:18:31.744 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:31.774 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:31.774 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:18:31.774 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:18:32.994 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-18 03:18:32.994 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-18 03:18:32.994 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:18:33.014 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:18:33.014 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-18 03:18:33.014 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-18 03:18:33.224 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:18:33.244 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-18 03:18:33.244 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-18 03:18:33.294 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:18:33.314 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:18:33.314 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:18:33.414 -07 000000610 INF: =================== Cycle #111, Pumping Reagent IMT (1) ===================
17-03-18 03:18:33.414 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:18:33.414 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:33.444 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:18:33.444 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:18:33.444 -07 000000610 INF: =================== Cycle #111, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-18 03:18:33.574 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:18:33.614 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:34.694 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.990831,
17-03-18 03:18:35.054 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:35.084 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:35.504 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:35.534 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:35.534 -07 000000610 INF: LanePump: Waited 1920 ms for pump motion to complete
17-03-18 03:18:35.534 -07 000000610 INF: =================== Cycle #111, Pumping Reagent IMT (1) ===================
17-03-18 03:18:35.664 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:35.694 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:18:35.694 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:18:35.824 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:35.854 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:18:35.854 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:18:35.854 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:18:35.984 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:18:36.014 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:36.444 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:36.474 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:36.474 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:18:36.474 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:18:36.564 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-18 03:18:36.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:18:37.694 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-18 03:18:37.694 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:18:37.694 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:18:37.714 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:18:37.714 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-18 03:18:37.714 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:18:37.944 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:18:37.964 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-18 03:18:37.964 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-18 03:18:38.014 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:18:38.034 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:18:38.034 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:18:38.134 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:18:38.134 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:18:38.134 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:38.164 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:18:38.164 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:18:38.164 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:18:38.294 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:18:38.334 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:18:39.204 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:39.234 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:39.234 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:18:39.234 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:18:39.364 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:39.394 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:18:39.394 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:18:39.524 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:18:39.554 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:18:39.554 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:18:39.554 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:18:39.684 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:18:39.714 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:40.054 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.003063,
17-03-18 03:18:40.144 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:18:40.174 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:18:40.174 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:18:40.174 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:18:40.174 -07 000000610 INF: =================== Cycle #111, Flow Cell Temp 65° ===================
17-03-18 03:18:40.174 -07 000000610 INF: =================== Cycle #111, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-18 03:18:40.174 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-18 03:18:40.174 -07 000000569 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:18:40.184 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:18:40.184 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:18:40.184 -07 000000455 INF: FPGA: Recv TEC2EN 
17-03-18 03:18:40.194 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:18:40.194 -07 000000610 INF: =================== Cycle #111, Flow Cell Temp 65° ===================
17-03-18 03:18:40.194 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:18:40.194 -07 000000610 INF: WaitCommand(30000) start
17-03-18 03:18:41.564 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:18:41.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:18:45.414 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.033041,
17-03-18 03:18:46.564 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:18:46.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:18:50.774 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.028963,
17-03-18 03:18:51.564 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:18:51.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:18:56.134 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.024884,
17-03-18 03:18:56.564 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:18:56.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:01.494 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.0344,
17-03-18 03:19:01.564 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:01.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:06.564 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:06.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:06.854 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.043918,
17-03-18 03:19:10.204 -07 000000610 INF: WaitCommand(30000) end
17-03-18 03:19:10.204 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:19:10.204 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-18 03:19:10.304 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:10.334 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:19:10.334 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:19:10.334 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:19:10.464 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-18 03:19:10.504 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:19:11.044 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:11.074 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:11.074 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete
17-03-18 03:19:11.074 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:19:11.204 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:11.234 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:19:11.234 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:19:11.364 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:11.394 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:19:11.394 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:19:11.394 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:19:11.524 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:19:11.554 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:11.564 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:11.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:11.984 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:12.014 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:12.014 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:19:12.014 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:19:12.014 -07 000000561 INF: WaitCommand(30000) start
17-03-18 03:19:12.014 -07 000000461 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:19:12.014 -07 000000461 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:19:12.214 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.994908,
17-03-18 03:19:13.234 -07 000000461 INF: AsyncDelayTimer waited 1214ms
17-03-18 03:19:13.234 -07 000000461 INF: LanePump: Xmit /1?\r
17-03-18 03:19:13.264 -07 000000461 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:19:13.264 -07 000000461 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:19:13.394 -07 000000461 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:19:13.434 -07 000000461 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:19:15.774 -07 000000461 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:15.804 -07 000000461 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:19:16.224 -07 000000461 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:16.254 -07 000000461 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:16.254 -07 000000461 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-18 03:19:16.254 -07 000000461 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:19:16.254 -07 000000461 INF: ===================  ===================
17-03-18 03:19:16.564 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:16.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:17.574 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.96762,
17-03-18 03:19:21.564 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:21.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:22.934 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.959467,
17-03-18 03:19:26.564 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:26.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:28.294 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.969015,
17-03-18 03:19:31.564 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:31.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:33.654 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.996267,
17-03-18 03:19:36.564 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:36.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:39.014 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.011254,
17-03-18 03:19:41.564 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:41.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:42.024 -07 000000561 INF: WaitCommand(30000) end
17-03-18 03:19:42.024 -07 000000610 INF: =================== Cycle #111, Flow Cell Temp 22° ===================
17-03-18 03:19:42.024 -07 000000610 INF: =================== Cycle #111, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-18 03:19:42.024 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-18 03:19:42.034 -07 000000561 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:19:42.034 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 2 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:19:42.034 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:19:42.034 -07 000000430 INF: FPGA: Recv TEC2EN 
17-03-18 03:19:42.044 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:19:42.044 -07 000000610 INF: =================== Cycle #111, Flow Cell Temp 22° ===================
17-03-18 03:19:42.044 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:19:42.044 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:19:42.044 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:19:42.044 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:42.074 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:19:42.074 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:19:42.074 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:19:42.204 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:19:42.244 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:19:44.374 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.043918,
17-03-18 03:19:45.374 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:45.404 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:19:45.824 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:45.854 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:19:46.274 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:46.304 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:46.304 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:19:46.304 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:19:46.434 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:46.464 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:19:46.464 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:19:46.564 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:46.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:46.594 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:46.624 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:19:46.624 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:19:46.624 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:19:46.754 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:19:46.784 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:47.214 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:47.244 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:47.244 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:19:47.244 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:19:48.464 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:19:48.464 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-18 03:19:48.464 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:19:48.484 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:19:48.484 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-18 03:19:48.484 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-18 03:19:48.634 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:19:48.654 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:19:48.654 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:19:48.704 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:19:48.724 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:19:48.724 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:19:48.824 -07 000000610 INF: =================== Cycle #111, Pumping Reagent USM (2) ===================
17-03-18 03:19:48.824 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:19:48.824 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:48.854 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:19:48.854 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:19:48.854 -07 000000610 INF: =================== Cycle #111, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-18 03:19:48.984 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:19:49.024 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:19:49.734 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.016692,
17-03-18 03:19:50.464 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:50.494 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:19:50.914 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:50.944 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:50.944 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:19:50.944 -07 000000610 INF: =================== Cycle #111, Pumping Reagent USM (2) ===================
17-03-18 03:19:51.074 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:51.104 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:19:51.104 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:19:51.234 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:51.264 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:19:51.264 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:19:51.264 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:19:51.394 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:19:51.424 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:51.564 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:51.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:51.854 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:51.884 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:51.884 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:19:51.884 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:19:53.104 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:19:53.104 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:19:53.104 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:19:53.124 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:19:53.124 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-18 03:19:53.124 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:19:53.274 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:19:53.294 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:19:53.294 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:19:53.344 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:19:53.364 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:19:53.364 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:19:53.464 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:19:53.464 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:19:53.464 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:53.494 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:19:53.494 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:19:53.494 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:19:53.624 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:19:53.664 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:19:54.534 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:54.564 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:54.564 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:19:54.564 -07 000000610 INF: =================== Cycle #111, Pumping Reagent PR2 (3) ===================
17-03-18 03:19:54.694 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:54.724 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:19:54.724 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:19:54.854 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:19:54.884 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:19:54.884 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:19:54.884 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:19:55.014 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:19:55.044 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:55.094 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.039839,
17-03-18 03:19:55.474 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:55.504 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:55.504 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:19:55.504 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:19:55.504 -07 000000461 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:19:55.504 -07 000000455 INF: WaitCommand(10000) start
17-03-18 03:19:55.504 -07 000000461 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:19:56.564 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:19:56.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:19:56.724 -07 000000461 INF: AsyncDelayTimer waited 1216ms
17-03-18 03:19:56.724 -07 000000461 INF: LanePump: Xmit /1?\r
17-03-18 03:19:56.754 -07 000000461 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:19:56.754 -07 000000461 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:19:56.884 -07 000000461 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:19:56.924 -07 000000461 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:19:58.454 -07 000000461 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:58.484 -07 000000461 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:19:58.904 -07 000000461 INF: LanePump: Xmit /1Q\r
17-03-18 03:19:58.934 -07 000000461 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:19:58.934 -07 000000461 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:19:58.934 -07 000000461 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:19:58.934 -07 000000461 INF: ===================  ===================
17-03-18 03:20:00.454 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.023489,
17-03-18 03:20:01.564 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:01.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:05.514 -07 000000455 INF: WaitCommand(10000) end
17-03-18 03:20:05.514 -07 000000610 INF: =================== Cycle #111, Imaging ===================
17-03-18 03:20:05.514 -07 000000610 INF: Imaging Cycle 111: ScanTilesCommand Cycle 111 time start.
17-03-18 03:20:05.514 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-18 03:20:05.514 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:20:05.544 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:20:05.544 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-18 03:20:05.544 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-18 03:20:05.814 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.004458,
17-03-18 03:20:05.844 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:20:05.864 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:20:05.864 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:20:05.914 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:20:05.934 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:20:05.934 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:05.934 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:05.934 -07 000000501 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-18 03:20:05.934 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:05.934 -07 000000501 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-18 03:20:05.934 -07 000000502 INF: FPGA: Recv EXLED1ON 
17-03-18 03:20:05.944 -07 000000501 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:05.944 -07 000000501 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-18 03:20:05.944 -07 000000626 INF: FPGA: Recv EXLED1ADCR 23073
17-03-18 03:20:05.954 -07 000000501 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:05.954 -07 000000501 INF: RedLED: Using Red data: Photodiode ADC 23073 --> 7.4 mW (old method), or 204.5 mW (new method). Difference = 197.1 mW
17-03-18 03:20:05.954 -07 000000501 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-18 03:20:05.954 -07 000000569 INF: FPGA: Recv EXLED1OFF 
17-03-18 03:20:05.964 -07 000000501 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:05.964 -07 000000501 INF: RedLED: LED was on for 20 ms
17-03-18 03:20:05.964 -07 000000501 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 25 ms.
17-03-18 03:20:05.964 -07 000000501 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-18 03:20:05.964 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:05.964 -07 000000501 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-18 03:20:05.964 -07 000000579 INF: FPGA: Recv EXLED2ON 
17-03-18 03:20:05.974 -07 000000501 INF: FPGA: 'EXLED2ON' command took 1 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:20:05.974 -07 000000501 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:20:05.974 -07 000000430 INF: FPGA: Recv EXLED1ADCR 2102
17-03-18 03:20:05.984 -07 000000501 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:05.984 -07 000000501 INF: GreenLED: Using Green data: Photodiode ADC 2102 --> 0.9 mW (old method), or 182.6 mW (new method). Difference = 181.7 mW
17-03-18 03:20:05.984 -07 000000501 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-18 03:20:05.984 -07 000000591 INF: FPGA: Recv EXLED2OFF 
17-03-18 03:20:05.994 -07 000000501 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:05.994 -07 000000501 INF: GreenLED: LED was on for 19 ms
17-03-18 03:20:05.994 -07 000000501 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-18 03:20:05.994 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:20:05.994 -07 000000461 INF: FPGA: Recv EMCUR 
17-03-18 03:20:06.004 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:20:06.004 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-18 03:20:06.504 -07 000000502 INF: FPGA: Recv EMOUT
17-03-18 03:20:06.504 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 03:20:06.504 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-18 03:20:06.504 -07 000000618 INF: FPGA: Recv EMCUR 
17-03-18 03:20:06.514 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:20:06.514 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:20:06.514 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.38232421875, Z-Position -0.12665120097077. ------
17-03-18 03:20:06.514 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:20:06.514 -07 000000430 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17861 mm
17-03-18 03:20:06.514 -07 000000430 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:06.514 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:20:06.514 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:20:06.514 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 39017, sync = True, waitForSettling = False)
17-03-18 03:20:06.524 -07 000000591 INF: Z Motor: Moving to -0.178608 mm, started at -0.126651 mm, distance = -51.96 um
17-03-18 03:20:06.524 -07 000000591 INF: FPGA: Xmit ZDACW 39017\n [Z Motor]
17-03-18 03:20:06.524 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:06.524 -07 000000461 INF: Y Motor: Moving to 59.9126 mm, started at 75.3823 mm, delta = -15.4697 mm
17-03-18 03:20:06.524 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:20:06.534 -07 000000591 INF: FPGA: 'ZDACW 39017' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:06.534 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:06.534 -07 000000626 INF: FPGA: Recv ZDACR 39017
17-03-18 03:20:06.544 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:06.544 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:06.544 -07 000000591 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 03:20:06.544 -07 000000444 INF: FPGA: Recv YRDPOS 154383
17-03-18 03:20:06.554 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:20:06.554 -07 000000569 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:20:06.554 -07 000000461 INF: Y Motor: Encoder = 154383 = motor step 120611.7 = 75.3823 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:06.554 -07 000000461 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-18 03:20:06.554 -07 000000461 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:20:06.564 -07 000000461 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:20:06.564 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:06.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:06.754 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:20:06.754 -07 000000569 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 232 ms overall
17-03-18 03:20:08.244 -07 000000626 INF: FPGA: Recv YMVTO 122703 24779
17-03-18 03:20:08.244 -07 000000461 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1695 ms overall
17-03-18 03:20:08.244 -07 000000461 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:20:08.244 -07 000000461 INF: Y Motor: To move from 75.382 to 59.913 (-15.470 mm) should take 24752 steps, but required 24779 steps (15.487 mm). Slippage = 0.017 mm (0.00%).
17-03-18 03:20:08.244 -07 000000461 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1695 ms, distance = 15.470 mm, average velocity = 9.127 mm/sec
17-03-18 03:20:11.094 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:11.094 -07 000000462 INF: FPGA: Recv YRDPOS 122696
17-03-18 03:20:11.104 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:11.104 -07 000000461 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:11.124 -07 000000461 INF: Y Motor: After move to 59.912609, error = -0.002453, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:11.124 -07 000000461 INF: Y Motor: Position error after settling = -5 encoder counts (-0.002 mm), Delta during settling = -7 counts (-0.003 mm)
17-03-18 03:20:11.124 -07 000000461 INF: Y Motor: Moved to 59.9102 after 4609 ms
17-03-18 03:20:11.134 -07 000000430 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178608 mm (DAC = 39017)
17-03-18 03:20:11.134 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:11.134 -07 000000569 INF: FPGA: Recv ZSGSRD 37099
17-03-18 03:20:11.144 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:20:11.144 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:11.144 -07 000000561 INF: FPGA: Recv ZSGSRD 37087
17-03-18 03:20:11.154 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:11.154 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:11.154 -07 000000579 INF: FPGA: Recv ZSGSRD 37090
17-03-18 03:20:11.164 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:11.174 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:11.174 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.007176,
17-03-18 03:20:11.174 -07 000000618 INF: FPGA: Recv ZSGSRD 37094
17-03-18 03:20:11.184 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:11.194 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:11.194 -07 000000626 INF: FPGA: Recv ZSGSRD 37094
17-03-18 03:20:11.204 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:11.204 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:11.204 -07 000000576 INF: FPGA: Recv ZSGSRD 37099
17-03-18 03:20:11.214 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:11.224 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:11.224 -07 000000626 INF: FPGA: Recv ZSGSRD 37093
17-03-18 03:20:11.234 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:11.234 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:11.234 -07 000000501 INF: FPGA: Recv ZSGSRD 37096
17-03-18 03:20:11.244 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:11.264 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:11.264 -07 000000455 INF: FPGA: Recv ZSGSRD 37088
17-03-18 03:20:11.274 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:20:11.274 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:11.274 -07 000000606 INF: FPGA: Recv ZSGSRD 37094
17-03-18 03:20:11.284 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:11.284 -07 000000430 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:11.284 -07 000000579 INF: FPGA: Recv ZPIEZORD 33354
17-03-18 03:20:11.294 -07 000000430 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:11.294 -07 000000430 INF: Z Motor: Piezo is near 51.3 V (nominally 0 to 100 V), expect near 59.5 V, since DAC is at 5.954 V. Piezo Error = -8.3 V.
17-03-18 03:20:11.294 -07 000000430 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.6 um, Read 10 ADC samples: Avg = 37093 (-177.7 uncal um), Error = 0.9 uncal um, Median = 37094 (-177.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 37087 (-177.7 uncal um), Max = 37099 (-177.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:20:11.294 -07 000000430 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37093, posNoise = 6, negNoise = 6
17-03-18 03:20:11.294 -07 000000430 INF: Z Motor: After move to -0.178608, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:11.294 -07 000000430 INF: Z Motor: Settle wait time = 4612 ms, measure time = 158 ms (allowed 150 ms), total time = 4770 ms
17-03-18 03:20:11.294 -07 000000430 INF: Z Motor: Warning: Actual position measuring time = 158 ms, longer than max expected time of 150 ms
17-03-18 03:20:11.294 -07 000000430 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4775 ms
17-03-18 03:20:11.294 -07 000000430 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:11.294 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:11.294 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:11.294 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:11.294 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:11.294 -07 000000606 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:20:11.294 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:11.294 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:20:11.294 -07 000000606 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:20:11.324 -07 000000606 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 03:20:11.324 -07 000000606 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:20:11.324 -07 000000606 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:20:11.324 -07 000000606 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:20:11.344 -07 000000606 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:20:11.344 -07 000000606 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 43 ms.
17-03-18 03:20:11.344 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:20:11.384 -07 000000561 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:20:11.564 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:11.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:11.684 -07 000000591 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:20:11.684 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:20:11.684 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:20:11.694 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 601398408, 0x0, 559484976) start.
17-03-18 03:20:11.724 -07 000000424 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:20:11.724 -07 000000576 INF: FPGA: Recv CAMSNAP
17-03-18 03:20:11.724 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall
17-03-18 03:20:11.814 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 601398408, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:20:11.814 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:11.814 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:20:11.814 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:20:11.924 -07 000000467 INF: Image SNR check: start
17-03-18 03:20:11.924 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:20:11.924 -07 000000576 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:20:11.934 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:20:11.934 -07 000000579 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:20:11.944 -07 000000467 INF: Image SNR check: pass  [peak (Max-Min)=157.06]
17-03-18 03:20:11.944 -07 000000467 INF: Autofocus start
17-03-18 03:20:11.944 -07 000000467 INF: MeasureProfile start
17-03-18 03:20:11.954 -07 000000467 INF: MeasureProfile done
17-03-18 03:20:11.954 -07 000000467 INF: X=32  Z correction [um]=0.09220707
17-03-18 03:20:11.954 -07 000000467 INF: Autofocus finished
17-03-18 03:20:12.134 -07 000000606 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:20:12.134 -07 000000579 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:20:12.134 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91015625, Z-position -0.178616652985474. ----------
17-03-18 03:20:12.134 -07 000000610 INF: Cycle	111	Tile	1	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:12.144 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37549, sync = True, waitForSettling = True)
17-03-18 03:20:12.144 -07 000000610 INF: Z Motor: Moving to -0.171888 mm, started at -0.178617 mm, distance = 6.73 um
17-03-18 03:20:12.144 -07 000000610 INF: FPGA: Xmit ZDACW 37549\n [Z Motor]
17-03-18 03:20:12.144 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:20:12.154 -07 000000610 INF: FPGA: 'ZDACW 37549' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:20:12.154 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:12.154 -07 000000591 INF: FPGA: Recv ZDACR 37549
17-03-18 03:20:12.164 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:12.164 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:12.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:12.314 -07 000000626 INF: FPGA: Recv ZSGSRD 36043
17-03-18 03:20:12.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:12.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:12.324 -07 000000467 INF: FPGA: Recv ZSGSRD 36050
17-03-18 03:20:12.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:12.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:12.334 -07 000000579 INF: FPGA: Recv ZSGSRD 36045
17-03-18 03:20:12.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:20:12.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:12.344 -07 000000606 INF: FPGA: Recv ZSGSRD 36046
17-03-18 03:20:12.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:12.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:12.354 -07 000000561 INF: FPGA: Recv ZSGSRD 36052
17-03-18 03:20:12.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:12.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:12.364 -07 000000444 INF: FPGA: Recv ZSGSRD 36043
17-03-18 03:20:12.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:12.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:12.374 -07 000000430 INF: FPGA: Recv ZSGSRD 36053
17-03-18 03:20:12.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:12.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:12.384 -07 000000569 INF: FPGA: Recv ZSGSRD 36048
17-03-18 03:20:12.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:12.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:12.394 -07 000000501 INF: FPGA: Recv ZSGSRD 36043
17-03-18 03:20:12.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:12.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:12.404 -07 000000502 INF: FPGA: Recv ZSGSRD 36055
17-03-18 03:20:12.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:12.414 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:12.414 -07 000000424 INF: FPGA: Recv ZPIEZORD 31932
17-03-18 03:20:12.424 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:12.424 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.730 V. Piezo Error = -9.1 V.
17-03-18 03:20:12.424 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36048 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36047 (-171.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36043 (-171.0 uncal um), Max = 36055 (-171.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:20:12.424 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36048, posNoise = 7, negNoise = 5
17-03-18 03:20:12.424 -07 000000610 INF: Z Motor: After move to -0.171888, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:12.424 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:20:12.424 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:12.424 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:12.424 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:12.424 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:12.424 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:12.424 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:12.424 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:12.424 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:12.424 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:20:12.424 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:20:12.424 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:12.424 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:12.434 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:20:12.434 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:12.444 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:20:12.444 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:20:12.454 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 22 ms.
17-03-18 03:20:12.454 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:12.454 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:20:12.454 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:12.464 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-18 03:20:12.464 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 39 ms.
17-03-18 03:20:12.464 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 37726 150\n [Camera]
17-03-18 03:20:12.664 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:13.074 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:13.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:13.074 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:13.074 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:13.074 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 03:20:13.074 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:13.074 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:13.074 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:13.074 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:13.074 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 03:20:13.264 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37726 789
17-03-18 03:20:13.414 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:13.474 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 03:20:13.474 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:20:13.474 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:13.474 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 03:20:13.474 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:20:13.474 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:13.484 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 03:20:13.484 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms.
17-03-18 03:20:13.484 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:20:13.494 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms.
17-03-18 03:20:13.604 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:13.604 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:13.604 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:13.604 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:13.604 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 03:20:13.614 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:13.614 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:13.614 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:13.614 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:13.614 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 03:20:13.804 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:20:13.804 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:13.804 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 37726 150' command took 2 ms to send, 1323 ms to get response, and 1335 ms overall
17-03-18 03:20:13.804 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.172210
17-03-18 03:20:13.804 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17221 mm
17-03-18 03:20:13.804 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:13.804 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:20:13.804 -07 000000569 INF: Y Motor: Moving to 60.7426 mm, started at 59.9102 mm, delta = 0.8325 mm
17-03-18 03:20:13.804 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:13.804 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 37619, sync = True, waitForSettling = False)
17-03-18 03:20:13.804 -07 000000591 INF: Z Motor: Moving to -0.172209 mm, started at -0.171903 mm, distance = -0.31 um
17-03-18 03:20:13.814 -07 000000591 INF: FPGA: Xmit ZDACW 37619\n [Z Motor]
17-03-18 03:20:13.814 -07 000000590 INF: FPGA: Recv YRDPOS 122696
17-03-18 03:20:13.814 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:20:13.814 -07 000000569 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:13.814 -07 000000569 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:13.814 -07 000000569 INF: Y Motor: Moving 1332 steps2
17-03-18 03:20:13.814 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:20:13.824 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:13.824 -07 000000591 INF: FPGA: 'ZDACW 37619' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:20:13.834 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:13.834 -07 000000626 INF: FPGA: Recv ZDACR 37619
17-03-18 03:20:13.844 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:13.844 -07 000000591 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-18 03:20:14.014 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 405 ms.
17-03-18 03:20:14.014 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 03:20:14.014 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:14.014 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 404 ms.
17-03-18 03:20:14.014 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 404 ms.
17-03-18 03:20:14.014 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:14.024 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 03:20:14.024 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 415 ms.
17-03-18 03:20:14.024 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 03:20:14.034 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 420 ms.
17-03-18 03:20:14.204 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:20:14.204 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 388 ms overall
17-03-18 03:20:14.244 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:14.244 -07 000000462 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:20:14.254 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:14.254 -07 000000569 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:14.254 -07 000000569 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 03:20:14.254 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.832 mm, average velocity = 2.134 mm/sec
17-03-18 03:20:15.204 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:15.204 -07 000000501 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:20:15.214 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:15.214 -07 000000569 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:15.244 -07 000000569 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:15.244 -07 000000569 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:20:15.244 -07 000000569 INF: Y Motor: Moved to 60.7324 after 1433 ms (table move)
17-03-18 03:20:15.244 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172209 mm (DAC = 37619)
17-03-18 03:20:15.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.244 -07 000000590 INF: FPGA: Recv ZSGSRD 36102
17-03-18 03:20:15.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:20:15.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.254 -07 000000444 INF: FPGA: Recv ZSGSRD 36099
17-03-18 03:20:15.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.264 -07 000000618 INF: FPGA: Recv ZSGSRD 36102
17-03-18 03:20:15.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.274 -07 000000579 INF: FPGA: Recv ZSGSRD 36096
17-03-18 03:20:15.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.284 -07 000000629 INF: FPGA: Recv ZSGSRD 36097
17-03-18 03:20:15.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.294 -07 000000561 INF: FPGA: Recv ZSGSRD 36094
17-03-18 03:20:15.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.304 -07 000000591 INF: FPGA: Recv ZSGSRD 36093
17-03-18 03:20:15.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.314 -07 000000424 INF: FPGA: Recv ZSGSRD 36098
17-03-18 03:20:15.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:20:15.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.324 -07 000000606 INF: FPGA: Recv ZSGSRD 36100
17-03-18 03:20:15.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.334 -07 000000501 INF: FPGA: Recv ZSGSRD 36099
17-03-18 03:20:15.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.344 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:15.344 -07 000000618 INF: FPGA: Recv ZPIEZORD 32037
17-03-18 03:20:15.354 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.354 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.740 V. Piezo Error = -9.0 V.
17-03-18 03:20:15.354 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36098 (-171.3 uncal um), Error = 0.9 uncal um, Median = 36098 (-171.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 36093 (-171.3 uncal um), Max = 36102 (-171.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:20:15.354 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36098, posNoise = 4, negNoise = 5
17-03-18 03:20:15.354 -07 000000610 INF: Z Motor: After move to -0.172209, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:15.354 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 107 ms (allowed 150 ms), total time = 1542 ms
17-03-18 03:20:15.354 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:15.404 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-18 03:20:15.404 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:15.404 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.172224561904422. ----------
17-03-18 03:20:15.404 -07 000000610 INF: Cycle	111	Tile	2	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:15.404 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37443, sync = True, waitForSettling = True)
17-03-18 03:20:15.404 -07 000000610 INF: Z Motor: Moving to -0.171403 mm, started at -0.172225 mm, distance = 0.82 um
17-03-18 03:20:15.404 -07 000000610 INF: FPGA: Xmit ZDACW 37443\n [Z Motor]
17-03-18 03:20:15.404 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:20:15.414 -07 000000610 INF: FPGA: 'ZDACW 37443' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:15.414 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:15.414 -07 000000629 INF: FPGA: Recv ZDACR 37443
17-03-18 03:20:15.424 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.424 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:15.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.574 -07 000000590 INF: FPGA: Recv ZSGSRD 35975
17-03-18 03:20:15.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:15.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.584 -07 000000502 INF: FPGA: Recv ZSGSRD 35970
17-03-18 03:20:15.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.594 -07 000000606 INF: FPGA: Recv ZSGSRD 35978
17-03-18 03:20:15.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.604 -07 000000455 INF: FPGA: Recv ZSGSRD 35974
17-03-18 03:20:15.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.614 -07 000000618 INF: FPGA: Recv ZSGSRD 35971
17-03-18 03:20:15.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.624 -07 000000467 INF: FPGA: Recv ZSGSRD 35965
17-03-18 03:20:15.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.634 -07 000000502 INF: FPGA: Recv ZSGSRD 35967
17-03-18 03:20:15.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.654 -07 000000618 INF: FPGA: Recv ZSGSRD 35975
17-03-18 03:20:15.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:15.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.664 -07 000000561 INF: FPGA: Recv ZSGSRD 35973
17-03-18 03:20:15.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:15.674 -07 000000501 INF: FPGA: Recv ZSGSRD 35973
17-03-18 03:20:15.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.684 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:15.684 -07 000000444 INF: FPGA: Recv ZPIEZORD 31883
17-03-18 03:20:15.694 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:15.694 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.713 V. Piezo Error = -9.0 V.
17-03-18 03:20:15.694 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.4 um, Read 10 ADC samples: Avg = 35972 (-170.5 uncal um), Error = 0.9 uncal um, Median = 35973 (-170.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35965 (-170.5 uncal um), Max = 35978 (-170.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:20:15.694 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35972, posNoise = 6, negNoise = 7
17-03-18 03:20:15.694 -07 000000610 INF: Z Motor: After move to -0.171403, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:15.694 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-18 03:20:15.694 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:15.694 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:15.694 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:15.694 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:15.694 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:15.694 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:15.694 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:15.694 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:15.694 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:15.694 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:15.694 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:20:15.694 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:15.704 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:20:15.704 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:15.704 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:20:15.704 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:15.714 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:20:15.714 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:20:15.714 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:20:15.714 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:20:15.714 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 37619 150\n [Camera]
17-03-18 03:20:15.914 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:16.324 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:16.324 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:16.324 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:16.324 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:16.324 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-18 03:20:16.324 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:16.324 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:16.324 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:16.324 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:16.324 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-18 03:20:16.514 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37619 789
17-03-18 03:20:16.564 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:16.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:16.584 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.005817,
17-03-18 03:20:16.664 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:16.704 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:20:16.704 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:20:16.704 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:16.714 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:16.714 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 391 ms.
17-03-18 03:20:16.714 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:20:16.714 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:16.714 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:20:16.714 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:16.714 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:20:16.854 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:16.854 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:16.854 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:16.854 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:16.854 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-18 03:20:16.864 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:16.864 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:16.864 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:16.864 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:16.864 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-18 03:20:17.054 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:20:17.054 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:17.054 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 37619 150' command took 2 ms to send, 1321 ms to get response, and 1333 ms overall
17-03-18 03:20:17.054 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.172062
17-03-18 03:20:17.054 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17206 mm
17-03-18 03:20:17.054 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:17.054 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:20:17.054 -07 000000561 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm
17-03-18 03:20:17.054 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:17.054 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 37587, sync = True, waitForSettling = False)
17-03-18 03:20:17.054 -07 000000579 INF: Z Motor: Moving to -0.172062 mm, started at -0.171415 mm, distance = -0.65 um
17-03-18 03:20:17.064 -07 000000501 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:20:17.064 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:20:17.064 -07 000000561 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:17.064 -07 000000561 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:17.064 -07 000000561 INF: Y Motor: Moving 1344 steps-21
17-03-18 03:20:17.064 -07 000000579 INF: FPGA: Xmit ZDACW 37587\n [Z Motor]
17-03-18 03:20:17.064 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:20:17.074 -07 000000579 INF: FPGA: 'ZDACW 37587' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:20:17.074 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:17.084 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:17.084 -07 000000606 INF: FPGA: Recv ZDACR 37587
17-03-18 03:20:17.094 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:17.094 -07 000000579 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:20:17.264 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 403 ms.
17-03-18 03:20:17.264 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:20:17.264 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:17.264 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 03:20:17.264 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:20:17.264 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:17.264 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:17.264 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms.
17-03-18 03:20:17.264 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:17.274 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 03:20:17.444 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:20:17.444 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall
17-03-18 03:20:17.494 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:17.504 -07 000000430 INF: FPGA: Recv YRDPOS 126081
17-03-18 03:20:17.504 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 3 ms to get response, and 6 ms overall
17-03-18 03:20:17.504 -07 000000561 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:17.504 -07 000000561 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:20:17.504 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.840 mm, average velocity = 2.160 mm/sec
17-03-18 03:20:18.454 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:18.454 -07 000000569 INF: FPGA: Recv YRDPOS 126081
17-03-18 03:20:18.464 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.464 -07 000000561 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:18.494 -07 000000561 INF: Y Motor: After move to 61.572609, error = -0.009621, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:18.494 -07 000000561 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:20:18.494 -07 000000561 INF: Y Motor: Moved to 61.5630 after 1433 ms (table move)
17-03-18 03:20:18.494 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172062 mm (DAC = 37587)
17-03-18 03:20:18.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.494 -07 000000461 INF: FPGA: Recv ZSGSRD 36073
17-03-18 03:20:18.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:20:18.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.504 -07 000000455 INF: FPGA: Recv ZSGSRD 36070
17-03-18 03:20:18.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.514 -07 000000576 INF: FPGA: Recv ZSGSRD 36071
17-03-18 03:20:18.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.524 -07 000000629 INF: FPGA: Recv ZSGSRD 36084
17-03-18 03:20:18.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.534 -07 000000444 INF: FPGA: Recv ZSGSRD 36079
17-03-18 03:20:18.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.544 -07 000000424 INF: FPGA: Recv ZSGSRD 36073
17-03-18 03:20:18.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.554 -07 000000462 INF: FPGA: Recv ZSGSRD 36081
17-03-18 03:20:18.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.564 -07 000000502 INF: FPGA: Recv ZSGSRD 36073
17-03-18 03:20:18.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.574 -07 000000629 INF: FPGA: Recv ZSGSRD 36070
17-03-18 03:20:18.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.584 -07 000000561 INF: FPGA: Recv ZSGSRD 36073
17-03-18 03:20:18.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.594 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:18.594 -07 000000606 INF: FPGA: Recv ZPIEZORD 32016
17-03-18 03:20:18.604 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.604 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.735 V. Piezo Error = -9.0 V.
17-03-18 03:20:18.604 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.1 um, Read 10 ADC samples: Avg = 36075 (-171.2 uncal um), Error = 0.9 uncal um, Median = 36073 (-171.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36070 (-171.2 uncal um), Max = 36084 (-171.3 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:20:18.604 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36075, posNoise = 9, negNoise = 5
17-03-18 03:20:18.604 -07 000000610 INF: Z Motor: After move to -0.172062, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:18.604 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 110 ms (allowed 150 ms), total time = 1545 ms
17-03-18 03:20:18.604 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:18.644 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1584 ms
17-03-18 03:20:18.644 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:18.644 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56298828125, Z-position -0.172076805025161. ----------
17-03-18 03:20:18.644 -07 000000610 INF: Cycle	111	Tile	3	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:18.644 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37410, sync = True, waitForSettling = True)
17-03-18 03:20:18.644 -07 000000610 INF: Z Motor: Moving to -0.171252 mm, started at -0.172077 mm, distance = 0.82 um
17-03-18 03:20:18.644 -07 000000610 INF: FPGA: Xmit ZDACW 37410\n [Z Motor]
17-03-18 03:20:18.644 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:20:18.654 -07 000000610 INF: FPGA: 'ZDACW 37410' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:18.654 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:18.654 -07 000000576 INF: FPGA: Recv ZDACR 37410
17-03-18 03:20:18.664 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.664 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:18.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.814 -07 000000430 INF: FPGA: Recv ZSGSRD 35949
17-03-18 03:20:18.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:18.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.824 -07 000000561 INF: FPGA: Recv ZSGSRD 35947
17-03-18 03:20:18.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.834 -07 000000461 INF: FPGA: Recv ZSGSRD 35954
17-03-18 03:20:18.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.844 -07 000000629 INF: FPGA: Recv ZSGSRD 35949
17-03-18 03:20:18.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.854 -07 000000444 INF: FPGA: Recv ZSGSRD 35948
17-03-18 03:20:18.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.864 -07 000000430 INF: FPGA: Recv ZSGSRD 35951
17-03-18 03:20:18.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.874 -07 000000467 INF: FPGA: Recv ZSGSRD 35946
17-03-18 03:20:18.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.884 -07 000000606 INF: FPGA: Recv ZSGSRD 35949
17-03-18 03:20:18.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.894 -07 000000462 INF: FPGA: Recv ZSGSRD 35948
17-03-18 03:20:18.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:18.904 -07 000000576 INF: FPGA: Recv ZSGSRD 35949
17-03-18 03:20:18.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.914 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:18.914 -07 000000501 INF: FPGA: Recv ZPIEZORD 31846
17-03-18 03:20:18.924 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:18.924 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.708 V. Piezo Error = -9.1 V.
17-03-18 03:20:18.924 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35949 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35949 (-170.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35946 (-170.4 uncal um), Max = 35954 (-170.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:20:18.924 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35949, posNoise = 5, negNoise = 3
17-03-18 03:20:18.924 -07 000000610 INF: Z Motor: After move to -0.171252, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:18.924 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:20:18.924 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:18.924 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:18.924 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:18.924 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:18.924 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:18.924 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:18.924 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:18.924 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:18.924 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:18.924 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:18.924 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:20:18.924 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:18.934 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:20:18.934 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:18.934 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:20:18.934 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:18.944 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:20:18.944 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:20:18.944 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:20:18.944 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:20:18.954 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 37587 150\n [Camera]
17-03-18 03:20:19.154 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 194
17-03-18 03:20:19.554 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:19.554 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:19.554 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:19.554 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:19.554 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-18 03:20:19.554 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:19.554 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:19.554 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:19.554 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:19.554 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-18 03:20:19.744 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37587 789
17-03-18 03:20:19.894 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:19.934 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:20:19.934 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:20:19.934 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:19.934 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:20:19.934 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:20:19.934 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:19.934 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:19.934 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:20:19.934 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:19.944 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:20:20.094 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:20.094 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:20.094 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:20.094 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:20.094 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-18 03:20:20.094 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:20.094 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:20.094 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:20.094 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:20.094 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start.
17-03-18 03:20:20.284 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:20:20.284 -07 000000629 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:20.284 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 37587 150' command took 2 ms to send, 1322 ms to get response, and 1332 ms overall
17-03-18 03:20:20.284 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:20:20.284 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56298828125, Z-Position -0.1712673542953. ------
17-03-18 03:20:20.294 -07 000000424 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17758 mm
17-03-18 03:20:20.294 -07 000000424 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:20.294 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:20:20.294 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:20:20.294 -07 000000444 INF: Y Motor: Moving to 62.4026 mm, started at 61.5630 mm, delta = 0.8396 mm
17-03-18 03:20:20.294 -07 000000467 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:20:20.294 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 38792, sync = True, waitForSettling = False)
17-03-18 03:20:20.294 -07 000000512 INF: Z Motor: Moving to -0.177578 mm, started at -0.171267 mm, distance = -6.31 um
17-03-18 03:20:20.304 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:20:20.304 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:20.304 -07 000000590 INF: FPGA: Recv YRDPOS 126081
17-03-18 03:20:20.314 -07 000000512 INF: FPGA: Xmit ZDACW 38792\n [Z Motor]
17-03-18 03:20:20.314 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:20:20.314 -07 000000444 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:20.314 -07 000000444 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:20.314 -07 000000444 INF: Y Motor: Moving 1343 steps-20
17-03-18 03:20:20.314 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:20:20.324 -07 000000618 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:20:20.324 -07 000000512 INF: FPGA: 'ZDACW 38792' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-18 03:20:20.334 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:20.344 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:20.344 -07 000000591 INF: FPGA: Recv ZDACR 38792
17-03-18 03:20:20.354 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:20:20.354 -07 000000512 INF: Z Motor: MoveAbsStepped took 54 ms (did NOT wait for settling yet))
17-03-18 03:20:20.474 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:20:20.474 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:20:20.474 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:20.474 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:20:20.474 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:20:20.474 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:20.474 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:20.474 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:20:20.474 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:20.484 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:20:20.524 -07 000000579 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:20:20.524 -07 000000618 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:20:20.714 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 03:20:20.714 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 3 ms to send, 371 ms to get response, and 399 ms overall
17-03-18 03:20:20.754 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:20.764 -07 000000579 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:20:20.764 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:20:20.764 -07 000000444 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:20.764 -07 000000444 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 03:20:20.764 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.840 mm, average velocity = 2.099 mm/sec
17-03-18 03:20:21.564 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:21.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:21.714 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:21.714 -07 000000467 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:20:21.724 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:21.724 -07 000000444 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:21.744 -07 000000444 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:21.744 -07 000000444 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:20:21.744 -07 000000444 INF: Y Motor: Moved to 62.3950 after 1454 ms (table move)
17-03-18 03:20:21.754 -07 000000424 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177578 mm (DAC = 38792)
17-03-18 03:20:21.754 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:21.754 -07 000000590 INF: FPGA: Recv ZSGSRD 36933
17-03-18 03:20:21.764 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:20:21.764 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:21.764 -07 000000626 INF: FPGA: Recv ZSGSRD 36931
17-03-18 03:20:21.774 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:21.774 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:21.774 -07 000000467 INF: FPGA: Recv ZSGSRD 36923
17-03-18 03:20:21.784 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:21.784 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:21.784 -07 000000501 INF: FPGA: Recv ZSGSRD 36937
17-03-18 03:20:21.794 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:21.794 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:21.794 -07 000000444 INF: FPGA: Recv ZSGSRD 36938
17-03-18 03:20:21.804 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:21.804 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:21.804 -07 000000590 INF: FPGA: Recv ZSGSRD 36920
17-03-18 03:20:21.814 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:21.814 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:21.814 -07 000000430 INF: FPGA: Recv ZSGSRD 36937
17-03-18 03:20:21.824 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:21.824 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:21.824 -07 000000502 INF: FPGA: Recv ZSGSRD 36931
17-03-18 03:20:21.834 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:21.834 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:21.834 -07 000000461 INF: FPGA: Recv ZSGSRD 36930
17-03-18 03:20:21.844 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:21.844 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:21.844 -07 000000444 INF: FPGA: Recv ZSGSRD 36927
17-03-18 03:20:21.854 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:21.854 -07 000000424 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:21.854 -07 000000467 INF: FPGA: Recv ZPIEZORD 33136
17-03-18 03:20:21.864 -07 000000424 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:21.864 -07 000000424 INF: Z Motor: Piezo is near 50.8 V (nominally 0 to 100 V), expect near 59.2 V, since DAC is at 5.919 V. Piezo Error = -8.4 V.
17-03-18 03:20:21.864 -07 000000424 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.6 um, Read 10 ADC samples: Avg = 36931 (-176.7 uncal um), Error = 0.9 uncal um, Median = 36931 (-176.7 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 36920 (-176.6 uncal um), Max = 36938 (-176.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 03:20:21.864 -07 000000424 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36931, posNoise = 7, negNoise = 11
17-03-18 03:20:21.864 -07 000000424 INF: Z Motor: After move to -0.177578, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:21.864 -07 000000424 INF: Z Motor: Settle wait time = 1458 ms, measure time = 107 ms (allowed 150 ms), total time = 1565 ms
17-03-18 03:20:21.864 -07 000000424 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:21.914 -07 000000424 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1619 ms
17-03-18 03:20:21.914 -07 000000424 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:21.914 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:21.914 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:21.914 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:21.914 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:20:21.914 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:21.914 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:21.914 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:21.914 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:20:21.924 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:20:21.924 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:20:21.934 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 03:20:21.934 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-18 03:20:21.944 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.000345,
17-03-18 03:20:21.954 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:20:21.994 -07 000000629 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:20:22.294 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:20:22.294 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:20:22.294 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:20:22.294 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 620873176, 0x0, 559484976) start.
17-03-18 03:20:22.334 -07 000000467 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:20:22.334 -07 000000502 INF: FPGA: Recv CAMSNAP
17-03-18 03:20:22.334 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 374 ms to get response, and 400 ms overall
17-03-18 03:20:22.424 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 620873176, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:20:22.424 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:22.424 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:20:22.424 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:20:22.534 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:20:22.534 -07 000000461 INF: Autofocus start
17-03-18 03:20:22.534 -07 000000461 INF: MeasureProfile start
17-03-18 03:20:22.534 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:20:22.544 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:20:22.544 -07 000000626 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:20:22.544 -07 000000461 INF: MeasureProfile done
17-03-18 03:20:22.544 -07 000000461 INF: X=-16  Z correction [um]=-0.1496812
17-03-18 03:20:22.544 -07 000000461 INF: Autofocus finished
17-03-18 03:20:22.744 -07 000000462 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:20:22.744 -07 000000626 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:20:22.754 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.177575930618509. ----------
17-03-18 03:20:22.754 -07 000000610 INF: Cycle	111	Tile	4	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:22.754 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37272, sync = True, waitForSettling = True)
17-03-18 03:20:22.754 -07 000000610 INF: Z Motor: Moving to -0.170620 mm, started at -0.177576 mm, distance = 6.96 um
17-03-18 03:20:22.754 -07 000000610 INF: FPGA: Xmit ZDACW 37272\n [Z Motor]
17-03-18 03:20:22.754 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:20:22.764 -07 000000610 INF: FPGA: 'ZDACW 37272' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:22.764 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:22.764 -07 000000591 INF: FPGA: Recv ZDACR 37272
17-03-18 03:20:22.774 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:22.774 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:22.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:22.924 -07 000000462 INF: FPGA: Recv ZSGSRD 35852
17-03-18 03:20:22.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:22.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:22.934 -07 000000569 INF: FPGA: Recv ZSGSRD 35848
17-03-18 03:20:22.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:22.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:22.944 -07 000000502 INF: FPGA: Recv ZSGSRD 35850
17-03-18 03:20:22.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:22.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:22.954 -07 000000606 INF: FPGA: Recv ZSGSRD 35851
17-03-18 03:20:22.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:22.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:22.964 -07 000000626 INF: FPGA: Recv ZSGSRD 35853
17-03-18 03:20:22.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:22.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:22.974 -07 000000424 INF: FPGA: Recv ZSGSRD 35843
17-03-18 03:20:22.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:22.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:22.984 -07 000000561 INF: FPGA: Recv ZSGSRD 35851
17-03-18 03:20:22.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:22.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:22.994 -07 000000455 INF: FPGA: Recv ZSGSRD 35851
17-03-18 03:20:23.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:23.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:23.004 -07 000000467 INF: FPGA: Recv ZSGSRD 35845
17-03-18 03:20:23.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:23.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:23.014 -07 000000626 INF: FPGA: Recv ZSGSRD 35851
17-03-18 03:20:23.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:23.024 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:23.024 -07 000000461 INF: FPGA: Recv ZPIEZORD 31699
17-03-18 03:20:23.034 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:23.034 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.687 V. Piezo Error = -9.2 V.
17-03-18 03:20:23.034 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.6 um, Read 10 ADC samples: Avg = 35850 (-169.8 uncal um), Error = 0.9 uncal um, Median = 35851 (-169.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35843 (-169.7 uncal um), Max = 35853 (-169.8 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:20:23.034 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35850, posNoise = 3, negNoise = 7
17-03-18 03:20:23.034 -07 000000610 INF: Z Motor: After move to -0.170620, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:23.034 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 03:20:23.034 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:23.034 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:23.034 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:23.034 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:23.034 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:23.034 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:23.034 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:23.034 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:23.034 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:23.034 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:23.034 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:20:23.034 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:23.044 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:20:23.044 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:23.044 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:20:23.044 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:23.054 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:20:23.054 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:20:23.054 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:20:23.054 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:20:23.054 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 37449 150\n [Camera]
17-03-18 03:20:23.254 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:23.654 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:23.654 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:23.654 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:23.654 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:23.654 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start.
17-03-18 03:20:23.664 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:23.664 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:23.664 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:23.664 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:23.664 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start.
17-03-18 03:20:23.854 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37449 792
17-03-18 03:20:23.994 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:24.034 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:20:24.034 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:20:24.034 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:24.034 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:20:24.034 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:20:24.034 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:24.044 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:24.044 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:20:24.044 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:24.054 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:20:24.194 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:24.194 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:24.194 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:24.344 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:24.344 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:24.344 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:24.354 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:24.354 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 580966680, 0x0, 391868352) start.
17-03-18 03:20:24.354 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:24.354 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:20:24.384 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:20:24.384 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:24.384 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 37449 150' command took 2 ms to send, 1326 ms to get response, and 1332 ms overall
17-03-18 03:20:24.384 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171107
17-03-18 03:20:24.384 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17111 mm
17-03-18 03:20:24.384 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:24.394 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:20:24.394 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 37378, sync = True, waitForSettling = False)
17-03-18 03:20:24.394 -07 000000502 INF: Z Motor: Moving to -0.171106 mm, started at -0.170631 mm, distance = -0.47 um
17-03-18 03:20:24.394 -07 000000502 INF: FPGA: Xmit ZDACW 37378\n [Z Motor]
17-03-18 03:20:24.394 -07 000000579 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm
17-03-18 03:20:24.394 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:20:24.404 -07 000000502 INF: FPGA: 'ZDACW 37378' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:20:24.404 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:24.404 -07 000000590 INF: FPGA: Recv ZDACR 37378
17-03-18 03:20:24.414 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:24.414 -07 000000502 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-18 03:20:24.414 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:24.414 -07 000000591 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:20:24.424 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:20:24.424 -07 000000579 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:24.424 -07 000000579 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:24.424 -07 000000579 INF: Y Motor: Moving 1339 steps-16
17-03-18 03:20:24.424 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:24.744 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 580966680, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 03:20:24.744 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:20:24.744 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:24.744 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 394 ms.
17-03-18 03:20:24.744 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:20:24.744 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:24.754 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:20:24.754 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 559 ms.
17-03-18 03:20:24.754 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:20:24.764 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 419 ms.
17-03-18 03:20:24.804 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 03:20:24.804 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 374 ms to get response, and 380 ms overall
17-03-18 03:20:24.854 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:24.854 -07 000000430 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:20:24.864 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:24.864 -07 000000579 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:24.864 -07 000000579 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:20:24.864 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 380 ms, distance = 0.838 mm, average velocity = 2.204 mm/sec
17-03-18 03:20:25.814 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:25.814 -07 000000561 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:20:25.824 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:25.824 -07 000000579 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:25.854 -07 000000579 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:25.854 -07 000000579 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:20:25.854 -07 000000579 INF: Y Motor: Moved to 63.2236 after 1462 ms (table move)
17-03-18 03:20:25.854 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171106 mm (DAC = 37378)
17-03-18 03:20:25.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:25.854 -07 000000606 INF: FPGA: Recv ZSGSRD 35925
17-03-18 03:20:25.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:20:25.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:25.864 -07 000000626 INF: FPGA: Recv ZSGSRD 35925
17-03-18 03:20:25.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:25.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:25.874 -07 000000579 INF: FPGA: Recv ZSGSRD 35925
17-03-18 03:20:25.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:25.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:25.884 -07 000000502 INF: FPGA: Recv ZSGSRD 35926
17-03-18 03:20:25.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:25.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:25.894 -07 000000501 INF: FPGA: Recv ZSGSRD 35930
17-03-18 03:20:25.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:25.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:25.904 -07 000000606 INF: FPGA: Recv ZSGSRD 35928
17-03-18 03:20:25.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:25.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:25.914 -07 000000455 INF: FPGA: Recv ZSGSRD 35928
17-03-18 03:20:25.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:25.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:25.924 -07 000000444 INF: FPGA: Recv ZSGSRD 35921
17-03-18 03:20:25.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:25.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:25.934 -07 000000629 INF: FPGA: Recv ZSGSRD 35923
17-03-18 03:20:25.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:25.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:25.944 -07 000000462 INF: FPGA: Recv ZSGSRD 35929
17-03-18 03:20:25.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:25.954 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:25.954 -07 000000512 INF: FPGA: Recv ZPIEZORD 31813
17-03-18 03:20:25.964 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:25.964 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.704 V. Piezo Error = -9.1 V.
17-03-18 03:20:25.964 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35926 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35926 (-170.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35921 (-170.2 uncal um), Max = 35930 (-170.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:20:25.964 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35926, posNoise = 4, negNoise = 5
17-03-18 03:20:25.964 -07 000000610 INF: Z Motor: After move to -0.171106, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:25.964 -07 000000610 INF: Z Motor: Settle wait time = 1464 ms, measure time = 105 ms (allowed 150 ms), total time = 1569 ms
17-03-18 03:20:25.964 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:26.014 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1621 ms
17-03-18 03:20:26.014 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:26.014 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.171119597416039. ----------
17-03-18 03:20:26.014 -07 000000610 INF: Cycle	111	Tile	5	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:26.014 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37202, sync = True, waitForSettling = True)
17-03-18 03:20:26.014 -07 000000610 INF: Z Motor: Moving to -0.170300 mm, started at -0.171120 mm, distance = 0.82 um
17-03-18 03:20:26.014 -07 000000610 INF: FPGA: Xmit ZDACW 37202\n [Z Motor]
17-03-18 03:20:26.014 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:20:26.024 -07 000000610 INF: FPGA: 'ZDACW 37202' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:26.024 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:26.024 -07 000000606 INF: FPGA: Recv ZDACR 37202
17-03-18 03:20:26.034 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:26.034 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:26.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:26.184 -07 000000430 INF: FPGA: Recv ZSGSRD 35803
17-03-18 03:20:26.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:26.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:26.194 -07 000000579 INF: FPGA: Recv ZSGSRD 35797
17-03-18 03:20:26.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:26.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:26.204 -07 000000629 INF: FPGA: Recv ZSGSRD 35792
17-03-18 03:20:26.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:26.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:26.214 -07 000000590 INF: FPGA: Recv ZSGSRD 35800
17-03-18 03:20:26.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:26.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:26.224 -07 000000501 INF: FPGA: Recv ZSGSRD 35805
17-03-18 03:20:26.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:26.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:26.234 -07 000000512 INF: FPGA: Recv ZSGSRD 35796
17-03-18 03:20:26.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:26.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:26.244 -07 000000462 INF: FPGA: Recv ZSGSRD 35799
17-03-18 03:20:26.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:26.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:26.254 -07 000000618 INF: FPGA: Recv ZSGSRD 35797
17-03-18 03:20:26.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:26.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:26.264 -07 000000591 INF: FPGA: Recv ZSGSRD 35802
17-03-18 03:20:26.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:26.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:26.274 -07 000000579 INF: FPGA: Recv ZSGSRD 35802
17-03-18 03:20:26.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:26.284 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:26.284 -07 000000629 INF: FPGA: Recv ZPIEZORD 31637
17-03-18 03:20:26.294 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:26.294 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.677 V. Piezo Error = -9.2 V.
17-03-18 03:20:26.294 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.3 um, Read 10 ADC samples: Avg = 35799 (-169.4 uncal um), Error = 0.9 uncal um, Median = 35800 (-169.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35792 (-169.4 uncal um), Max = 35805 (-169.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:20:26.294 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35799, posNoise = 6, negNoise = 7
17-03-18 03:20:26.294 -07 000000610 INF: Z Motor: After move to -0.170300, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:26.294 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:20:26.294 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:26.294 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:26.294 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:26.294 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:26.294 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:26.294 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:26.294 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:26.294 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:26.294 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:20:26.294 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:26.294 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:26.294 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:26.304 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:20:26.304 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:26.304 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:20:26.304 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:26.314 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:20:26.314 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:20:26.314 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:20:26.314 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:20:26.314 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 37378 150\n [Camera]
17-03-18 03:20:26.514 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:26.564 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:26.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:26.914 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:26.914 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:26.914 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:26.924 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:26.924 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:26.924 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:26.924 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:26.924 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) start.
17-03-18 03:20:26.934 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:26.934 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:20:27.114 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37378 789
17-03-18 03:20:27.264 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:27.304 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 03:20:27.304 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-18 03:20:27.304 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:27.304 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:20:27.304 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:20:27.304 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:27.304 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:27.304 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:20:27.314 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:27.314 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.005817,
17-03-18 03:20:27.314 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:20:27.554 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:27.554 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:27.554 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:27.554 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:27.554 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:27.554 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:27.554 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:27.554 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) start.
17-03-18 03:20:27.564 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:27.564 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:20:27.644 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:20:27.644 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:27.644 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 37378 150' command took 2 ms to send, 1327 ms to get response, and 1333 ms overall
17-03-18 03:20:27.644 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.170773
17-03-18 03:20:27.644 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17077 mm
17-03-18 03:20:27.644 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:27.654 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 37305, sync = True, waitForSettling = False)
17-03-18 03:20:27.654 -07 000000576 INF: Z Motor: Moving to -0.170771 mm, started at -0.170304 mm, distance = -0.47 um
17-03-18 03:20:27.654 -07 000000576 INF: FPGA: Xmit ZDACW 37305\n [Z Motor]
17-03-18 03:20:27.654 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:20:27.654 -07 000000561 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm
17-03-18 03:20:27.654 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:20:27.664 -07 000000576 INF: FPGA: 'ZDACW 37305' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:20:27.664 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:27.664 -07 000000590 INF: FPGA: Recv ZDACR 37305
17-03-18 03:20:27.674 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:27.674 -07 000000576 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet))
17-03-18 03:20:27.674 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:27.674 -07 000000502 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:20:27.684 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:20:27.684 -07 000000561 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:27.684 -07 000000561 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:27.684 -07 000000561 INF: Y Motor: Moving 1342 steps-18
17-03-18 03:20:27.684 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:27.954 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:20:27.954 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:20:27.954 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:27.954 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 392 ms.
17-03-18 03:20:27.954 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:20:27.954 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:27.954 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:27.954 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:20:27.954 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:27.964 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-18 03:20:28.054 -07 000000430 INF: FPGA: Recv YMVTILE
17-03-18 03:20:28.054 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-18 03:20:28.104 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:28.104 -07 000000569 INF: FPGA: Recv YRDPOS 131187
17-03-18 03:20:28.114 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:20:28.114 -07 000000561 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:28.114 -07 000000561 INF: Y Motor: Position error before settling (table move) = -13 encoder counts (-0.006 mm)
17-03-18 03:20:28.114 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.839 mm, average velocity = 2.220 mm/sec
17-03-18 03:20:29.064 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:29.064 -07 000000591 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:20:29.074 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.074 -07 000000561 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:29.094 -07 000000561 INF: Y Motor: After move to 64.062607, error = -0.005966, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:29.094 -07 000000561 INF: Y Motor: Position error after settling (table move) = -12 encoder counts (-0.006 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:20:29.094 -07 000000561 INF: Y Motor: Moved to 64.0566 after 1442 ms (table move)
17-03-18 03:20:29.094 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170771 mm (DAC = 37305)
17-03-18 03:20:29.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.104 -07 000000512 INF: FPGA: Recv ZSGSRD 35877
17-03-18 03:20:29.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:20:29.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.104 -07 000000629 INF: FPGA: Recv ZSGSRD 35867
17-03-18 03:20:29.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:20:29.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.114 -07 000000579 INF: FPGA: Recv ZSGSRD 35871
17-03-18 03:20:29.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.124 -07 000000591 INF: FPGA: Recv ZSGSRD 35879
17-03-18 03:20:29.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.134 -07 000000626 INF: FPGA: Recv ZSGSRD 35874
17-03-18 03:20:29.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:29.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.144 -07 000000462 INF: FPGA: Recv ZSGSRD 35879
17-03-18 03:20:29.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.154 -07 000000444 INF: FPGA: Recv ZSGSRD 35862
17-03-18 03:20:29.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.164 -07 000000502 INF: FPGA: Recv ZSGSRD 35865
17-03-18 03:20:29.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.174 -07 000000569 INF: FPGA: Recv ZSGSRD 35870
17-03-18 03:20:29.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.184 -07 000000430 INF: FPGA: Recv ZSGSRD 35871
17-03-18 03:20:29.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.194 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:29.194 -07 000000501 INF: FPGA: Recv ZPIEZORD 31727
17-03-18 03:20:29.204 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.204 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.692 V. Piezo Error = -9.1 V.
17-03-18 03:20:29.204 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.8 um, Read 10 ADC samples: Avg = 35872 (-169.9 uncal um), Error = 0.9 uncal um, Median = 35871 (-169.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35862 (-169.8 uncal um), Max = 35879 (-169.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:20:29.204 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35872, posNoise = 7, negNoise = 10
17-03-18 03:20:29.204 -07 000000610 INF: Z Motor: After move to -0.170771, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:29.204 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 109 ms (allowed 150 ms), total time = 1554 ms
17-03-18 03:20:29.204 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:29.254 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-18 03:20:29.254 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:29.254 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.056640625, Z-position -0.170772689960384. ----------
17-03-18 03:20:29.254 -07 000000610 INF: Cycle	111	Tile	6	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:29.254 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37129, sync = True, waitForSettling = True)
17-03-18 03:20:29.254 -07 000000610 INF: Z Motor: Moving to -0.169966 mm, started at -0.170773 mm, distance = 0.81 um
17-03-18 03:20:29.254 -07 000000610 INF: FPGA: Xmit ZDACW 37129\n [Z Motor]
17-03-18 03:20:29.254 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:20:29.264 -07 000000610 INF: FPGA: 'ZDACW 37129' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:29.264 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:29.264 -07 000000455 INF: FPGA: Recv ZDACR 37129
17-03-18 03:20:29.274 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.274 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:29.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.424 -07 000000618 INF: FPGA: Recv ZSGSRD 35752
17-03-18 03:20:29.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:29.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.434 -07 000000461 INF: FPGA: Recv ZSGSRD 35754
17-03-18 03:20:29.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.444 -07 000000462 INF: FPGA: Recv ZSGSRD 35746
17-03-18 03:20:29.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.454 -07 000000591 INF: FPGA: Recv ZSGSRD 35749
17-03-18 03:20:29.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.464 -07 000000501 INF: FPGA: Recv ZSGSRD 35751
17-03-18 03:20:29.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.474 -07 000000606 INF: FPGA: Recv ZSGSRD 35744
17-03-18 03:20:29.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.484 -07 000000461 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:20:29.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.494 -07 000000502 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:20:29.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.504 -07 000000591 INF: FPGA: Recv ZSGSRD 35749
17-03-18 03:20:29.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:29.514 -07 000000455 INF: FPGA: Recv ZSGSRD 35750
17-03-18 03:20:29.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.524 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:29.524 -07 000000462 INF: FPGA: Recv ZPIEZORD 31598
17-03-18 03:20:29.534 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:29.534 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.666 V. Piezo Error = -9.2 V.
17-03-18 03:20:29.534 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35748 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35749 (-169.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35744 (-169.1 uncal um), Max = 35754 (-169.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:20:29.534 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35748, posNoise = 6, negNoise = 4
17-03-18 03:20:29.534 -07 000000610 INF: Z Motor: After move to -0.169966, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:29.534 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:20:29.534 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:29.534 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:29.534 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:29.534 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:29.534 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:29.534 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:29.534 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:29.534 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:29.534 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:20:29.534 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:29.534 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:29.534 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:29.534 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:20:29.544 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:29.544 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:20:29.544 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:29.554 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:20:29.554 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:20:29.554 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:20:29.554 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:20:29.554 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 37305 150\n [Camera]
17-03-18 03:20:29.754 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:30.164 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:30.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:30.164 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:30.164 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:30.164 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:30.164 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:30.164 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:30.164 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) start.
17-03-18 03:20:30.174 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:30.174 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:20:30.354 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37305 789
17-03-18 03:20:30.504 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 941
17-03-18 03:20:30.564 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) end. Duration was 393 ms.
17-03-18 03:20:30.564 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:20:30.564 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:30.564 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:30.564 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 03:20:30.564 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 03:20:30.564 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:20:30.564 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:30.574 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:30.574 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 03:20:30.694 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:30.694 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:30.704 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:30.704 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:30.704 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:30.704 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:30.704 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:30.704 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:20:30.714 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:30.714 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:20:30.894 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:20:30.894 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:30.894 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 37305 150' command took 4 ms to send, 1321 ms to get response, and 1332 ms overall
17-03-18 03:20:30.894 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.170420
17-03-18 03:20:30.894 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17042 mm
17-03-18 03:20:30.894 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:30.894 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:20:30.894 -07 000000444 INF: Y Motor: Moving to 64.8926 mm, started at 64.0566 mm, delta = 0.8360 mm
17-03-18 03:20:30.894 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 37228, sync = True, waitForSettling = False)
17-03-18 03:20:30.894 -07 000000629 INF: Z Motor: Moving to -0.170419 mm, started at -0.169976 mm, distance = -0.44 um
17-03-18 03:20:30.894 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:30.904 -07 000000629 INF: FPGA: Xmit ZDACW 37228\n [Z Motor]
17-03-18 03:20:30.904 -07 000000467 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:20:30.904 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:20:30.904 -07 000000444 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:30.904 -07 000000444 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:30.904 -07 000000444 INF: Y Motor: Moving 1338 steps-13
17-03-18 03:20:30.904 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:20:30.914 -07 000000629 INF: FPGA: 'ZDACW 37228' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:20:30.914 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:30.924 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:30.924 -07 000000424 INF: FPGA: Recv ZDACR 37228
17-03-18 03:20:30.934 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:30.934 -07 000000629 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-18 03:20:31.084 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:20:31.084 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:20:31.084 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:31.084 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:20:31.084 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:20:31.084 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:31.084 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:31.084 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:20:31.094 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:31.094 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:20:31.284 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:20:31.284 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 03:20:31.334 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:31.344 -07 000000561 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:20:31.344 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:20:31.344 -07 000000444 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:31.344 -07 000000444 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:20:31.344 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.836 mm, average velocity = 2.166 mm/sec
17-03-18 03:20:31.564 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:31.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:32.294 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:32.294 -07 000000501 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:20:32.304 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:32.304 -07 000000444 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:32.334 -07 000000444 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:32.334 -07 000000444 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:20:32.334 -07 000000444 INF: Y Motor: Moved to 64.8784 after 1433 ms (table move)
17-03-18 03:20:32.334 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170419 mm (DAC = 37228)
17-03-18 03:20:32.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.334 -07 000000561 INF: FPGA: Recv ZSGSRD 35827
17-03-18 03:20:32.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:20:32.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.344 -07 000000591 INF: FPGA: Recv ZSGSRD 35821
17-03-18 03:20:32.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.364 -07 000000461 INF: FPGA: Recv ZSGSRD 35823
17-03-18 03:20:32.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:32.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.374 -07 000000626 INF: FPGA: Recv ZSGSRD 35823
17-03-18 03:20:32.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.384 -07 000000606 INF: FPGA: Recv ZSGSRD 35814
17-03-18 03:20:32.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.394 -07 000000561 INF: FPGA: Recv ZSGSRD 35812
17-03-18 03:20:32.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.404 -07 000000591 INF: FPGA: Recv ZSGSRD 35823
17-03-18 03:20:32.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.414 -07 000000455 INF: FPGA: Recv ZSGSRD 35815
17-03-18 03:20:32.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.424 -07 000000591 INF: FPGA: Recv ZSGSRD 35822
17-03-18 03:20:32.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:32.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.434 -07 000000606 INF: FPGA: Recv ZSGSRD 35821
17-03-18 03:20:32.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.444 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:32.444 -07 000000590 INF: FPGA: Recv ZPIEZORD 31714
17-03-18 03:20:32.454 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.454 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.681 V. Piezo Error = -9.1 V.
17-03-18 03:20:32.454 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35820 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35822 (-169.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35812 (-169.5 uncal um), Max = 35827 (-169.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:20:32.454 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35820, posNoise = 7, negNoise = 8
17-03-18 03:20:32.454 -07 000000610 INF: Z Motor: After move to -0.170419, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:32.454 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 117 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:20:32.454 -07 000000610 INF: Z Motor: Waiting extra 33 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:32.494 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1595 ms
17-03-18 03:20:32.494 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:32.494 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.170438630929012. ----------
17-03-18 03:20:32.494 -07 000000610 INF: Cycle	111	Tile	7	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:32.494 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37051, sync = True, waitForSettling = True)
17-03-18 03:20:32.494 -07 000000610 INF: Z Motor: Moving to -0.169609 mm, started at -0.170439 mm, distance = 0.83 um
17-03-18 03:20:32.494 -07 000000610 INF: FPGA: Xmit ZDACW 37051\n [Z Motor]
17-03-18 03:20:32.494 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:20:32.504 -07 000000610 INF: FPGA: 'ZDACW 37051' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:32.504 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:32.504 -07 000000569 INF: FPGA: Recv ZDACR 37051
17-03-18 03:20:32.514 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.514 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:32.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.674 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.985358,
17-03-18 03:20:32.674 -07 000000462 INF: FPGA: Recv ZSGSRD 35700
17-03-18 03:20:32.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:32.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.704 -07 000000590 INF: FPGA: Recv ZSGSRD 35692
17-03-18 03:20:32.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:20:32.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.734 -07 000000455 INF: FPGA: Recv ZSGSRD 35697
17-03-18 03:20:32.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:20:32.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.744 -07 000000467 INF: FPGA: Recv ZSGSRD 35693
17-03-18 03:20:32.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.754 -07 000000502 INF: FPGA: Recv ZSGSRD 35687
17-03-18 03:20:32.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.764 -07 000000430 INF: FPGA: Recv ZSGSRD 35690
17-03-18 03:20:32.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.774 -07 000000626 INF: FPGA: Recv ZSGSRD 35697
17-03-18 03:20:32.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.784 -07 000000579 INF: FPGA: Recv ZSGSRD 35695
17-03-18 03:20:32.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.794 -07 000000629 INF: FPGA: Recv ZSGSRD 35684
17-03-18 03:20:32.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:32.804 -07 000000606 INF: FPGA: Recv ZSGSRD 35692
17-03-18 03:20:32.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.814 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:32.814 -07 000000561 INF: FPGA: Recv ZPIEZORD 31513
17-03-18 03:20:32.824 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:32.824 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.654 V. Piezo Error = -9.2 V.
17-03-18 03:20:32.824 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.6 um, Read 10 ADC samples: Avg = 35693 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35692 (-168.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35684 (-168.7 uncal um), Max = 35700 (-168.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:20:32.824 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35693, posNoise = 7, negNoise = 9
17-03-18 03:20:32.824 -07 000000610 INF: Z Motor: After move to -0.169609, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:32.824 -07 000000610 INF: Z Motor: MoveAbsStepped took 327 ms)
17-03-18 03:20:32.824 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:32.824 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:32.824 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:32.824 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:32.824 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:32.824 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:32.824 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:32.824 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:32.824 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:32.824 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:32.824 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:20:32.824 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:32.834 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:20:32.834 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:32.834 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:20:32.834 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:32.844 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:20:32.844 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:20:32.844 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:20:32.844 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:20:32.844 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 37228 150\n [Camera]
17-03-18 03:20:33.044 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:33.454 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:20:33.454 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:20:33.454 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:33.454 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:20:33.454 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:20:33.464 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:33.564 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:33.574 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:20:33.574 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:33.574 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 576012080, 0x0, 418435064) start.
17-03-18 03:20:33.644 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37228 789
17-03-18 03:20:33.794 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:33.954 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:20:33.954 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:20:33.954 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:33.964 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:33.964 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 503 ms.
17-03-18 03:20:33.964 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 576012080, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:20:33.964 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:20:33.964 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:33.964 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:33.974 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 510 ms.
17-03-18 03:20:33.994 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:33.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:33.994 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:33.994 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:33.994 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:33.994 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:33.994 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:33.994 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:20:33.994 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:33.994 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) start.
17-03-18 03:20:34.184 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:20:34.184 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:34.184 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 37228 150' command took 2 ms to send, 1322 ms to get response, and 1332 ms overall
17-03-18 03:20:34.184 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:20:34.184 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87841796875, Z-Position -0.169622755987009. ------
17-03-18 03:20:34.184 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:20:34.184 -07 000000444 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17605 mm
17-03-18 03:20:34.184 -07 000000444 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:34.194 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:20:34.194 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:20:34.194 -07 000000569 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:20:34.194 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:20:34.194 -07 000000424 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm
17-03-18 03:20:34.194 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 38459, sync = True, waitForSettling = False)
17-03-18 03:20:34.194 -07 000000502 INF: Z Motor: Moving to -0.176054 mm, started at -0.169623 mm, distance = -6.43 um
17-03-18 03:20:34.204 -07 000000502 INF: FPGA: Xmit ZDACW 38459\n [Z Motor]
17-03-18 03:20:34.204 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:20:34.214 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:34.214 -07 000000502 INF: FPGA: 'ZDACW 38459' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:20:34.214 -07 000000467 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:20:34.224 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:20:34.224 -07 000000424 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:34.224 -07 000000424 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:34.224 -07 000000424 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:20:34.224 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:34.224 -07 000000590 INF: FPGA: Recv ZDACR 38459
17-03-18 03:20:34.234 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:34.234 -07 000000502 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 03:20:34.234 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:34.374 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 03:20:34.374 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:20:34.374 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:34.374 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:20:34.374 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:20:34.374 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:34.374 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:34.374 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:20:34.374 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:34.384 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:20:34.394 -07 000000618 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:20:34.394 -07 000000569 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-18 03:20:34.604 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:20:34.604 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:20:34.654 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:34.654 -07 000000579 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:20:34.664 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:20:34.664 -07 000000424 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:34.664 -07 000000424 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:20:34.664 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.176 mm/sec
17-03-18 03:20:35.614 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:35.614 -07 000000569 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:20:35.624 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:35.624 -07 000000424 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:35.654 -07 000000424 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:35.654 -07 000000424 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:20:35.654 -07 000000424 INF: Y Motor: Moved to 65.7134 after 1461 ms (table move)
17-03-18 03:20:35.654 -07 000000444 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176054 mm (DAC = 38459)
17-03-18 03:20:35.654 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:35.664 -07 000000430 INF: FPGA: Recv ZSGSRD 36696
17-03-18 03:20:35.664 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:20:35.664 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:35.664 -07 000000461 INF: FPGA: Recv ZSGSRD 36691
17-03-18 03:20:35.674 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:20:35.674 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:35.674 -07 000000606 INF: FPGA: Recv ZSGSRD 36695
17-03-18 03:20:35.684 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:35.684 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:35.684 -07 000000512 INF: FPGA: Recv ZSGSRD 36693
17-03-18 03:20:35.694 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:35.694 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:35.694 -07 000000590 INF: FPGA: Recv ZSGSRD 36692
17-03-18 03:20:35.704 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:35.704 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:35.704 -07 000000467 INF: FPGA: Recv ZSGSRD 36688
17-03-18 03:20:35.714 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:35.714 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:35.714 -07 000000462 INF: FPGA: Recv ZSGSRD 36694
17-03-18 03:20:35.724 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:35.724 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:35.724 -07 000000629 INF: FPGA: Recv ZSGSRD 36695
17-03-18 03:20:35.734 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:35.734 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:35.734 -07 000000626 INF: FPGA: Recv ZSGSRD 36695
17-03-18 03:20:35.744 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:35.744 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:35.744 -07 000000590 INF: FPGA: Recv ZSGSRD 36697
17-03-18 03:20:35.754 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:35.754 -07 000000444 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:35.754 -07 000000618 INF: FPGA: Recv ZPIEZORD 32846
17-03-18 03:20:35.764 -07 000000444 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:35.764 -07 000000444 INF: Z Motor: Piezo is near 50.2 V (nominally 0 to 100 V), expect near 58.7 V, since DAC is at 5.868 V. Piezo Error = -8.5 V.
17-03-18 03:20:35.764 -07 000000444 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.1 um, Read 10 ADC samples: Avg = 36694 (-175.2 uncal um), Error = 0.9 uncal um, Median = 36694 (-175.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 36688 (-175.1 uncal um), Max = 36697 (-175.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:20:35.764 -07 000000444 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36694, posNoise = 3, negNoise = 6
17-03-18 03:20:35.764 -07 000000444 INF: Z Motor: After move to -0.176054, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:35.764 -07 000000444 INF: Z Motor: Settle wait time = 1464 ms, measure time = 101 ms (allowed 150 ms), total time = 1565 ms
17-03-18 03:20:35.764 -07 000000444 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:35.814 -07 000000444 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1621 ms
17-03-18 03:20:35.814 -07 000000444 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:35.814 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:35.814 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:35.814 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:35.814 -07 000000576 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:20:35.814 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:35.814 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:35.814 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:20:35.814 -07 000000576 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:20:35.824 -07 000000576 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:20:35.824 -07 000000576 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:20:35.834 -07 000000576 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms.
17-03-18 03:20:35.834 -07 000000576 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 13 ms.
17-03-18 03:20:35.834 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:20:35.874 -07 000000430 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:20:36.174 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:20:36.174 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:20:36.174 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:20:36.184 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1441468064, 0x0, 559484976) start.
17-03-18 03:20:36.214 -07 000000462 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:20:36.214 -07 000000512 INF: FPGA: Recv CAMSNAP
17-03-18 03:20:36.214 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 377 ms to get response, and 384 ms overall
17-03-18 03:20:36.304 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1441468064, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:20:36.304 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:36.304 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:20:36.304 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:20:36.414 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:20:36.414 -07 000000606 INF: Autofocus start
17-03-18 03:20:36.414 -07 000000606 INF: MeasureProfile start
17-03-18 03:20:36.414 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:20:36.424 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:20:36.424 -07 000000629 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:20:36.424 -07 000000606 INF: MeasureProfile done
17-03-18 03:20:36.424 -07 000000606 INF: X=64  Z correction [um]=0.2557664
17-03-18 03:20:36.424 -07 000000606 INF: Autofocus finished
17-03-18 03:20:36.564 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:36.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:36.624 -07 000000591 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:20:36.624 -07 000000629 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:20:36.624 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.176053392340911. ----------
17-03-18 03:20:36.624 -07 000000610 INF: Cycle	111	Tile	8	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:36.634 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37027, sync = True, waitForSettling = True)
17-03-18 03:20:36.634 -07 000000610 INF: Z Motor: Moving to -0.169499 mm, started at -0.176053 mm, distance = 6.55 um
17-03-18 03:20:36.634 -07 000000610 INF: FPGA: Xmit ZDACW 37027\n [Z Motor]
17-03-18 03:20:36.634 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:20:36.644 -07 000000610 INF: FPGA: 'ZDACW 37027' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.644 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:36.644 -07 000000430 INF: FPGA: Recv ZDACR 37027
17-03-18 03:20:36.654 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.654 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:36.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:36.804 -07 000000561 INF: FPGA: Recv ZSGSRD 35670
17-03-18 03:20:36.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:36.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:36.814 -07 000000444 INF: FPGA: Recv ZSGSRD 35677
17-03-18 03:20:36.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:36.824 -07 000000462 INF: FPGA: Recv ZSGSRD 35672
17-03-18 03:20:36.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:36.834 -07 000000579 INF: FPGA: Recv ZSGSRD 35675
17-03-18 03:20:36.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:36.844 -07 000000467 INF: FPGA: Recv ZSGSRD 35676
17-03-18 03:20:36.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:36.854 -07 000000591 INF: FPGA: Recv ZSGSRD 35677
17-03-18 03:20:36.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:36.864 -07 000000461 INF: FPGA: Recv ZSGSRD 35679
17-03-18 03:20:36.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:36.874 -07 000000512 INF: FPGA: Recv ZSGSRD 35672
17-03-18 03:20:36.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:36.884 -07 000000590 INF: FPGA: Recv ZSGSRD 35673
17-03-18 03:20:36.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:36.894 -07 000000576 INF: FPGA: Recv ZSGSRD 35674
17-03-18 03:20:36.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.904 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:36.904 -07 000000430 INF: FPGA: Recv ZPIEZORD 31494
17-03-18 03:20:36.914 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:36.914 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.650 V. Piezo Error = -9.2 V.
17-03-18 03:20:36.914 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.5 um, Read 10 ADC samples: Avg = 35674 (-168.6 uncal um), Error = 0.9 uncal um, Median = 35674 (-168.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35670 (-168.6 uncal um), Max = 35679 (-168.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:20:36.914 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35674, posNoise = 5, negNoise = 4
17-03-18 03:20:36.914 -07 000000610 INF: Z Motor: After move to -0.169499, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:36.914 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:20:36.914 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:36.914 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:36.914 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:36.914 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:36.914 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:36.914 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:36.914 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:36.914 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:36.914 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:20:36.914 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:36.914 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:36.914 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:36.924 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:20:36.924 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:36.924 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:20:36.924 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:36.924 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:20:36.924 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:20:36.924 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:20:36.924 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:20:36.934 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 37204 150\n [Camera]
17-03-18 03:20:37.134 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:37.534 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:37.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:37.534 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:37.544 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:37.544 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:37.544 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:37.544 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:37.544 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:20:37.544 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:37.544 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:20:37.734 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37204 789
17-03-18 03:20:37.874 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:37.914 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 03:20:37.914 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-18 03:20:37.914 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:37.924 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:20:37.924 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:20:37.924 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:37.924 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:37.924 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:20:37.924 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:20:37.934 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:20:38.054 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.996267,
17-03-18 03:20:38.074 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:38.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:38.074 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:38.184 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:38.184 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:38.194 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:38.194 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:38.194 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:20:38.194 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:38.194 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 592887144, 0x0, 418435064) start.
17-03-18 03:20:38.264 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:20:38.264 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:38.264 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 37204 150' command took 2 ms to send, 1326 ms to get response, and 1332 ms overall
17-03-18 03:20:38.264 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.169983
17-03-18 03:20:38.264 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.16998 mm
17-03-18 03:20:38.264 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:38.274 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:20:38.274 -07 000000462 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm
17-03-18 03:20:38.274 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:38.274 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 37133, sync = True, waitForSettling = False)
17-03-18 03:20:38.274 -07 000000626 INF: Z Motor: Moving to -0.169984 mm, started at -0.169501 mm, distance = -0.48 um
17-03-18 03:20:38.274 -07 000000576 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:20:38.284 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:38.284 -07 000000462 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:38.284 -07 000000626 INF: FPGA: Xmit ZDACW 37133\n [Z Motor]
17-03-18 03:20:38.284 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:20:38.284 -07 000000462 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:38.284 -07 000000462 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:20:38.294 -07 000000626 INF: FPGA: 'ZDACW 37133' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:20:38.294 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:38.294 -07 000000444 INF: FPGA: Recv ZDACR 37133
17-03-18 03:20:38.304 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:38.304 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:38.304 -07 000000626 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 03:20:38.564 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:20:38.564 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:20:38.564 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:38.564 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 592887144, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:20:38.574 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:20:38.574 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:38.574 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:38.574 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 498 ms.
17-03-18 03:20:38.574 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:38.584 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:20:38.674 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 03:20:38.674 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 391 ms overall
17-03-18 03:20:38.724 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:38.724 -07 000000502 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:20:38.734 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:38.734 -07 000000462 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:38.734 -07 000000462 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:20:38.734 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 392 ms, distance = 0.839 mm, average velocity = 2.141 mm/sec
17-03-18 03:20:39.684 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:39.684 -07 000000569 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:20:39.694 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:39.694 -07 000000462 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:39.724 -07 000000462 INF: Y Motor: After move to 66.552605, error = -0.014030, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:39.724 -07 000000462 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:20:39.724 -07 000000462 INF: Y Motor: Moved to 66.5386 after 1450 ms (table move)
17-03-18 03:20:39.724 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169984 mm (DAC = 37133)
17-03-18 03:20:39.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:39.724 -07 000000591 INF: FPGA: Recv ZSGSRD 35756
17-03-18 03:20:39.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:20:39.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:39.734 -07 000000629 INF: FPGA: Recv ZSGSRD 35752
17-03-18 03:20:39.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:39.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:39.744 -07 000000576 INF: FPGA: Recv ZSGSRD 35753
17-03-18 03:20:39.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:39.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:39.754 -07 000000579 INF: FPGA: Recv ZSGSRD 35742
17-03-18 03:20:39.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:39.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:39.764 -07 000000561 INF: FPGA: Recv ZSGSRD 35756
17-03-18 03:20:39.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:39.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:39.774 -07 000000512 INF: FPGA: Recv ZSGSRD 35749
17-03-18 03:20:39.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:39.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:39.784 -07 000000502 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:20:39.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:39.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:39.794 -07 000000461 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:20:39.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:39.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:39.804 -07 000000501 INF: FPGA: Recv ZSGSRD 35756
17-03-18 03:20:39.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:39.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:39.814 -07 000000430 INF: FPGA: Recv ZSGSRD 35751
17-03-18 03:20:39.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:39.824 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:39.824 -07 000000444 INF: FPGA: Recv ZPIEZORD 31590
17-03-18 03:20:39.834 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:39.834 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.666 V. Piezo Error = -9.2 V.
17-03-18 03:20:39.834 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35750 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35752 (-169.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35742 (-169.1 uncal um), Max = 35756 (-169.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:20:39.834 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35750, posNoise = 6, negNoise = 8
17-03-18 03:20:39.834 -07 000000610 INF: Z Motor: After move to -0.169984, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:39.834 -07 000000610 INF: Z Motor: Settle wait time = 1452 ms, measure time = 107 ms (allowed 150 ms), total time = 1559 ms
17-03-18 03:20:39.834 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:39.884 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-18 03:20:39.884 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:39.884 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53857421875, Z-position -0.169988936079089. ----------
17-03-18 03:20:39.884 -07 000000610 INF: Cycle	111	Tile	9	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:39.884 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36956, sync = True, waitForSettling = True)
17-03-18 03:20:39.884 -07 000000610 INF: Z Motor: Moving to -0.169174 mm, started at -0.169989 mm, distance = 0.82 um
17-03-18 03:20:39.884 -07 000000610 INF: FPGA: Xmit ZDACW 36956\n [Z Motor]
17-03-18 03:20:39.884 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:20:39.894 -07 000000610 INF: FPGA: 'ZDACW 36956' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:20:39.894 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:39.894 -07 000000461 INF: FPGA: Recv ZDACR 36956
17-03-18 03:20:39.904 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:39.904 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:40.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:40.054 -07 000000591 INF: FPGA: Recv ZSGSRD 35621
17-03-18 03:20:40.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:40.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:40.064 -07 000000430 INF: FPGA: Recv ZSGSRD 35626
17-03-18 03:20:40.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:40.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:40.074 -07 000000512 INF: FPGA: Recv ZSGSRD 35621
17-03-18 03:20:40.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:40.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:40.084 -07 000000606 INF: FPGA: Recv ZSGSRD 35623
17-03-18 03:20:40.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:40.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:40.094 -07 000000576 INF: FPGA: Recv ZSGSRD 35624
17-03-18 03:20:40.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:40.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:40.104 -07 000000591 INF: FPGA: Recv ZSGSRD 35618
17-03-18 03:20:40.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:40.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:40.114 -07 000000561 INF: FPGA: Recv ZSGSRD 35622
17-03-18 03:20:40.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:40.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:40.124 -07 000000455 INF: FPGA: Recv ZSGSRD 35628
17-03-18 03:20:40.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:40.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:40.134 -07 000000629 INF: FPGA: Recv ZSGSRD 35629
17-03-18 03:20:40.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:40.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:40.144 -07 000000461 INF: FPGA: Recv ZSGSRD 35622
17-03-18 03:20:40.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:40.154 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:40.154 -07 000000467 INF: FPGA: Recv ZPIEZORD 31459
17-03-18 03:20:40.164 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:40.164 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.639 V. Piezo Error = -9.2 V.
17-03-18 03:20:40.164 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.2 um, Read 10 ADC samples: Avg = 35623 (-168.3 uncal um), Error = 0.9 uncal um, Median = 35622 (-168.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35618 (-168.3 uncal um), Max = 35629 (-168.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:20:40.164 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35623, posNoise = 6, negNoise = 5
17-03-18 03:20:40.164 -07 000000610 INF: Z Motor: After move to -0.169174, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:40.164 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:20:40.164 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:40.164 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:40.164 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:40.164 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:40.174 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:40.174 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:40.174 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:40.174 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:40.174 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:20:40.174 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:40.174 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:40.174 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:40.174 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:20:40.174 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:20:40.174 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:40.174 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:40.184 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 11 ms.
17-03-18 03:20:40.184 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:20:40.184 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 03:20:40.184 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:20:40.194 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 37133 150\n [Camera]
17-03-18 03:20:40.394 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:40.794 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:40.794 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:40.794 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:40.794 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:40.794 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:40.804 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:40.804 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:40.804 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:20:40.804 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:40.804 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:20:40.984 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37133 789
17-03-18 03:20:41.134 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:41.174 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:20:41.174 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:20:41.174 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:41.184 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:41.184 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:20:41.184 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:20:41.184 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:41.184 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:41.184 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:20:41.194 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:20:41.334 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:41.334 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:41.334 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:41.334 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:41.334 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:41.334 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:41.344 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:41.344 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1456144144, 0x0, 391868352) start.
17-03-18 03:20:41.344 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:41.344 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:20:41.524 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:20:41.524 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:41.524 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 37133 150' command took 2 ms to send, 1325 ms to get response, and 1333 ms overall
17-03-18 03:20:41.524 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.170016
17-03-18 03:20:41.524 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17002 mm
17-03-18 03:20:41.524 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:41.524 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:20:41.524 -07 000000455 INF: Y Motor: Moving to 67.3826 mm, started at 66.5386 mm, delta = 0.8440 mm
17-03-18 03:20:41.524 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:41.524 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 37140, sync = True, waitForSettling = False)
17-03-18 03:20:41.534 -07 000000512 INF: Z Motor: Moving to -0.170016 mm, started at -0.169173 mm, distance = -0.84 um
17-03-18 03:20:41.534 -07 000000512 INF: FPGA: Xmit ZDACW 37140\n [Z Motor]
17-03-18 03:20:41.534 -07 000000430 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:20:41.534 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:20:41.534 -07 000000455 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:41.534 -07 000000455 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:41.534 -07 000000455 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:20:41.534 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:20:41.544 -07 000000512 INF: FPGA: 'ZDACW 37140' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:41.544 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:41.544 -07 000000424 INF: FPGA: Recv ZDACR 37140
17-03-18 03:20:41.554 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:41.554 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:41.554 -07 000000512 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 03:20:41.674 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:41.674 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:41.724 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:20:41.724 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:20:41.724 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:41.724 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1456144144, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:20:41.724 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:20:41.724 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:41.724 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:41.724 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:41.724 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:20:41.734 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:20:41.934 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:20:41.934 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 259 ms to get response, and 398 ms overall
17-03-18 03:20:41.974 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:41.984 -07 000000462 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:20:41.984 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:20:41.984 -07 000000455 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:41.984 -07 000000455 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm)
17-03-18 03:20:41.984 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.844 mm, average velocity = 2.121 mm/sec
17-03-18 03:20:42.934 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:42.934 -07 000000561 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:20:42.944 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:42.944 -07 000000455 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:42.964 -07 000000455 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:42.974 -07 000000455 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:20:42.974 -07 000000455 INF: Y Motor: Moved to 67.3716 after 1440 ms (table move)
17-03-18 03:20:42.974 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170016 mm (DAC = 37140)
17-03-18 03:20:42.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:42.974 -07 000000501 INF: FPGA: Recv ZSGSRD 35760
17-03-18 03:20:42.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:20:42.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:42.984 -07 000000618 INF: FPGA: Recv ZSGSRD 35754
17-03-18 03:20:42.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:42.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:42.994 -07 000000430 INF: FPGA: Recv ZSGSRD 35753
17-03-18 03:20:43.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.004 -07 000000461 INF: FPGA: Recv ZSGSRD 35760
17-03-18 03:20:43.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.014 -07 000000561 INF: FPGA: Recv ZSGSRD 35757
17-03-18 03:20:43.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.024 -07 000000606 INF: FPGA: Recv ZSGSRD 35762
17-03-18 03:20:43.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.034 -07 000000618 INF: FPGA: Recv ZSGSRD 35759
17-03-18 03:20:43.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.044 -07 000000579 INF: FPGA: Recv ZSGSRD 35758
17-03-18 03:20:43.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.054 -07 000000444 INF: FPGA: Recv ZSGSRD 35749
17-03-18 03:20:43.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.064 -07 000000462 INF: FPGA: Recv ZSGSRD 35750
17-03-18 03:20:43.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.074 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:43.074 -07 000000502 INF: FPGA: Recv ZPIEZORD 31635
17-03-18 03:20:43.084 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.084 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.667 V. Piezo Error = -9.1 V.
17-03-18 03:20:43.084 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35756 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35758 (-169.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35749 (-169.1 uncal um), Max = 35762 (-169.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:20:43.084 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35756, posNoise = 6, negNoise = 7
17-03-18 03:20:43.084 -07 000000610 INF: Z Motor: After move to -0.170016, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:43.084 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 108 ms (allowed 150 ms), total time = 1550 ms
17-03-18 03:20:43.084 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:43.134 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms
17-03-18 03:20:43.134 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:43.134 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.17002748135194. ----------
17-03-18 03:20:43.134 -07 000000610 INF: Cycle	111	Tile	10	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:43.134 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36963, sync = True, waitForSettling = True)
17-03-18 03:20:43.134 -07 000000610 INF: Z Motor: Moving to -0.169206 mm, started at -0.170027 mm, distance = 0.82 um
17-03-18 03:20:43.134 -07 000000610 INF: FPGA: Xmit ZDACW 36963\n [Z Motor]
17-03-18 03:20:43.134 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:20:43.144 -07 000000610 INF: FPGA: 'ZDACW 36963' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:20:43.144 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:43.144 -07 000000430 INF: FPGA: Recv ZDACR 36963
17-03-18 03:20:43.154 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.154 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:43.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.304 -07 000000606 INF: FPGA: Recv ZSGSRD 35623
17-03-18 03:20:43.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:43.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.314 -07 000000444 INF: FPGA: Recv ZSGSRD 35632
17-03-18 03:20:43.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.324 -07 000000579 INF: FPGA: Recv ZSGSRD 35628
17-03-18 03:20:43.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.334 -07 000000591 INF: FPGA: Recv ZSGSRD 35631
17-03-18 03:20:43.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.344 -07 000000424 INF: FPGA: Recv ZSGSRD 35633
17-03-18 03:20:43.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.354 -07 000000590 INF: FPGA: Recv ZSGSRD 35628
17-03-18 03:20:43.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.364 -07 000000626 INF: FPGA: Recv ZSGSRD 35631
17-03-18 03:20:43.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.374 -07 000000579 INF: FPGA: Recv ZSGSRD 35627
17-03-18 03:20:43.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.384 -07 000000576 INF: FPGA: Recv ZSGSRD 35624
17-03-18 03:20:43.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:43.394 -07 000000512 INF: FPGA: Recv ZSGSRD 35632
17-03-18 03:20:43.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.404 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:43.404 -07 000000455 INF: FPGA: Recv ZPIEZORD 31430
17-03-18 03:20:43.414 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:43.414 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.640 V. Piezo Error = -9.3 V.
17-03-18 03:20:43.414 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.2 um, Read 10 ADC samples: Avg = 35629 (-168.3 uncal um), Error = 0.9 uncal um, Median = 35630 (-168.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35623 (-168.3 uncal um), Max = 35633 (-168.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:20:43.414 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35629, posNoise = 4, negNoise = 6
17-03-18 03:20:43.414 -07 000000610 INF: Z Motor: After move to -0.169206, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:43.414 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:20:43.414 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:43.414 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:43.414 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:43.414 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:43.414 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:43.414 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:43.414 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:43.414 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:43.414 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:20:43.414 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:43.414 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:43.414 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:43.424 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:20:43.424 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:43.424 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:20:43.424 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:43.434 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:20:43.434 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:20:43.434 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:20:43.434 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:20:43.444 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 37140 150\n [Camera]
17-03-18 03:20:43.514 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.003063,
17-03-18 03:20:43.644 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:44.044 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:44.044 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:44.044 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:44.044 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:44.044 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:44.044 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:44.044 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:44.044 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 592887144, 0x0, 391868352) start.
17-03-18 03:20:44.054 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:44.054 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:20:44.234 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37140 789
17-03-18 03:20:44.384 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:44.414 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 365 ms.
17-03-18 03:20:44.414 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 365 ms.
17-03-18 03:20:44.414 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:44.424 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:44.424 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 592887144, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:20:44.424 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:20:44.424 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:44.424 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:44.424 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:20:44.434 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:20:44.584 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:44.584 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:44.584 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:44.584 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:44.584 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:44.584 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:44.584 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:44.584 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:20:44.594 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:44.594 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:20:44.774 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:20:44.774 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:44.774 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 37140 150' command took 2 ms to send, 1322 ms to get response, and 1332 ms overall
17-03-18 03:20:44.774 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.169509
17-03-18 03:20:44.774 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16951 mm
17-03-18 03:20:44.774 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:44.774 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:20:44.774 -07 000000455 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-18 03:20:44.774 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:44.774 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 37029, sync = True, waitForSettling = False)
17-03-18 03:20:44.774 -07 000000569 INF: Z Motor: Moving to -0.169508 mm, started at -0.169212 mm, distance = -0.30 um
17-03-18 03:20:44.784 -07 000000569 INF: FPGA: Xmit ZDACW 37029\n [Z Motor]
17-03-18 03:20:44.784 -07 000000629 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:20:44.784 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:20:44.784 -07 000000455 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:44.784 -07 000000455 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:44.784 -07 000000455 INF: Y Motor: Moving 1346 steps-23
17-03-18 03:20:44.784 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:20:44.794 -07 000000569 INF: FPGA: 'ZDACW 37029' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:20:44.794 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:44.794 -07 000000424 INF: FPGA: Recv ZDACR 37029
17-03-18 03:20:44.804 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:44.804 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:44.804 -07 000000569 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:20:44.964 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:20:44.964 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:20:44.964 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:44.964 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:20:44.964 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:20:44.964 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:44.964 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:44.974 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:44.974 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:20:44.974 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:20:45.174 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 03:20:45.174 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:20:45.224 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:45.224 -07 000000462 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:20:45.234 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:45.234 -07 000000455 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:45.234 -07 000000455 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 03:20:45.234 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.841 mm, average velocity = 2.118 mm/sec
17-03-18 03:20:46.184 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:46.184 -07 000000629 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:20:46.194 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:46.194 -07 000000455 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:46.214 -07 000000455 INF: Y Motor: After move to 68.212608, error = -0.007530, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:46.214 -07 000000455 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:20:46.214 -07 000000455 INF: Y Motor: Moved to 68.2051 after 1441 ms (table move)
17-03-18 03:20:46.224 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169508 mm (DAC = 37029)
17-03-18 03:20:46.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.224 -07 000000430 INF: FPGA: Recv ZSGSRD 35681
17-03-18 03:20:46.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.234 -07 000000512 INF: FPGA: Recv ZSGSRD 35681
17-03-18 03:20:46.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.244 -07 000000461 INF: FPGA: Recv ZSGSRD 35673
17-03-18 03:20:46.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.254 -07 000000501 INF: FPGA: Recv ZSGSRD 35675
17-03-18 03:20:46.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.264 -07 000000590 INF: FPGA: Recv ZSGSRD 35675
17-03-18 03:20:46.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.274 -07 000000430 INF: FPGA: Recv ZSGSRD 35676
17-03-18 03:20:46.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.284 -07 000000512 INF: FPGA: Recv ZSGSRD 35673
17-03-18 03:20:46.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.294 -07 000000502 INF: FPGA: Recv ZSGSRD 35679
17-03-18 03:20:46.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.304 -07 000000576 INF: FPGA: Recv ZSGSRD 35679
17-03-18 03:20:46.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.314 -07 000000461 INF: FPGA: Recv ZSGSRD 35682
17-03-18 03:20:46.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.324 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:46.324 -07 000000618 INF: FPGA: Recv ZPIEZORD 31507
17-03-18 03:20:46.334 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.334 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.650 V. Piezo Error = -9.2 V.
17-03-18 03:20:46.334 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.5 um, Read 10 ADC samples: Avg = 35677 (-168.6 uncal um), Error = 0.9 uncal um, Median = 35678 (-168.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35673 (-168.6 uncal um), Max = 35682 (-168.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:20:46.334 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35677, posNoise = 5, negNoise = 4
17-03-18 03:20:46.334 -07 000000610 INF: Z Motor: After move to -0.169508, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:46.334 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 110 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:20:46.334 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:46.374 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-18 03:20:46.374 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:46.374 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.205078125, Z-position -0.169519968592741. ----------
17-03-18 03:20:46.374 -07 000000610 INF: Cycle	111	Tile	11	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:46.374 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36852, sync = True, waitForSettling = True)
17-03-18 03:20:46.374 -07 000000610 INF: Z Motor: Moving to -0.168698 mm, started at -0.169520 mm, distance = 0.82 um
17-03-18 03:20:46.374 -07 000000610 INF: FPGA: Xmit ZDACW 36852\n [Z Motor]
17-03-18 03:20:46.374 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:20:46.384 -07 000000610 INF: FPGA: 'ZDACW 36852' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:46.384 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:46.384 -07 000000606 INF: FPGA: Recv ZDACR 36852
17-03-18 03:20:46.394 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.394 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:46.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.544 -07 000000626 INF: FPGA: Recv ZSGSRD 35552
17-03-18 03:20:46.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.554 -07 000000579 INF: FPGA: Recv ZSGSRD 35558
17-03-18 03:20:46.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.564 -07 000000430 INF: FPGA: Recv ZSGSRD 35557
17-03-18 03:20:46.564 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:46.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:46.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.574 -07 000000424 INF: FPGA: Recv ZSGSRD 35546
17-03-18 03:20:46.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.584 -07 000000626 INF: FPGA: Recv ZSGSRD 35551
17-03-18 03:20:46.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.594 -07 000000618 INF: FPGA: Recv ZSGSRD 35544
17-03-18 03:20:46.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.604 -07 000000569 INF: FPGA: Recv ZSGSRD 35550
17-03-18 03:20:46.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.614 -07 000000591 INF: FPGA: Recv ZSGSRD 35551
17-03-18 03:20:46.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.624 -07 000000629 INF: FPGA: Recv ZSGSRD 35548
17-03-18 03:20:46.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:46.634 -07 000000444 INF: FPGA: Recv ZSGSRD 35560
17-03-18 03:20:46.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:46.644 -07 000000606 INF: FPGA: Recv ZPIEZORD 31321
17-03-18 03:20:46.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:46.654 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.623 V. Piezo Error = -9.3 V.
17-03-18 03:20:46.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.7 um, Read 10 ADC samples: Avg = 35552 (-167.8 uncal um), Error = 0.9 uncal um, Median = 35551 (-167.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35544 (-167.8 uncal um), Max = 35560 (-167.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:20:46.654 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35552, posNoise = 8, negNoise = 8
17-03-18 03:20:46.654 -07 000000610 INF: Z Motor: After move to -0.168698, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:46.654 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:20:46.654 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:46.654 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:46.654 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:46.654 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:46.654 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:46.654 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:46.654 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:46.654 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:46.654 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:46.654 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:46.654 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:20:46.654 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:46.654 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:20:46.664 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:46.664 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:20:46.664 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:46.674 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:20:46.674 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:20:46.674 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:20:46.674 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:20:46.684 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 37029 150\n [Camera]
17-03-18 03:20:46.874 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:47.284 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:47.284 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:47.284 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:47.284 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:47.284 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:47.284 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:47.284 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:47.284 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:20:47.284 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:47.284 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:20:47.474 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37029 789
17-03-18 03:20:47.624 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:47.664 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:20:47.664 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:20:47.664 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:47.664 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:20:47.664 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:20:47.664 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:47.664 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:47.664 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:20:47.664 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:47.674 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:20:47.824 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:47.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:47.824 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:47.824 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:47.824 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:20:47.824 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:47.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:47.824 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:47.824 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:47.824 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:20:48.014 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:20:48.014 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:48.014 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 37029 150' command took 2 ms to send, 1322 ms to get response, and 1332 ms overall
17-03-18 03:20:48.014 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:20:48.014 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.205078125, Z-Position -0.168716942075021. ------
17-03-18 03:20:48.014 -07 000000576 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:20:48.014 -07 000000561 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.17536 mm
17-03-18 03:20:48.014 -07 000000561 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:48.014 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:20:48.024 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 38307, sync = True, waitForSettling = False)
17-03-18 03:20:48.024 -07 000000579 INF: Z Motor: Moving to -0.175358 mm, started at -0.168717 mm, distance = -6.64 um
17-03-18 03:20:48.024 -07 000000579 INF: FPGA: Xmit ZDACW 38307\n [Z Motor]
17-03-18 03:20:48.024 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:20:48.024 -07 000000576 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:20:48.024 -07 000000444 INF: Y Motor: Moving to 69.0426 mm, started at 68.2051 mm, delta = 0.8375 mm
17-03-18 03:20:48.024 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:20:48.034 -07 000000579 INF: FPGA: 'ZDACW 38307' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:48.034 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:48.034 -07 000000569 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:20:48.044 -07 000000576 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:20:48.044 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:20:48.044 -07 000000444 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:48.044 -07 000000444 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:48.044 -07 000000444 INF: Y Motor: Moving 1340 steps-16
17-03-18 03:20:48.054 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:48.054 -07 000000591 INF: FPGA: Recv ZDACR 38307
17-03-18 03:20:48.064 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:20:48.064 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:48.064 -07 000000579 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 03:20:48.204 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:20:48.204 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:20:48.204 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:48.204 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:20:48.204 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:20:48.204 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:48.214 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:20:48.214 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:20:48.214 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:20:48.224 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:20:48.244 -07 000000626 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:20:48.244 -07 000000576 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall
17-03-18 03:20:48.434 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 03:20:48.434 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-18 03:20:48.484 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:48.494 -07 000000462 INF: FPGA: Recv YRDPOS 141366
17-03-18 03:20:48.504 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:48.504 -07 000000444 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:48.504 -07 000000444 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 03:20:48.504 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.838 mm, average velocity = 2.120 mm/sec
17-03-18 03:20:48.874 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.007176,
17-03-18 03:20:49.454 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:49.454 -07 000000502 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:20:49.464 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:49.464 -07 000000444 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:49.484 -07 000000444 INF: Y Motor: After move to 69.042610, error = -0.015755, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:49.484 -07 000000444 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:20:49.484 -07 000000444 INF: Y Motor: Moved to 69.0269 after 1469 ms (table move)
17-03-18 03:20:49.494 -07 000000561 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175358 mm (DAC = 38307)
17-03-18 03:20:49.494 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:49.494 -07 000000501 INF: FPGA: Recv ZSGSRD 36586
17-03-18 03:20:49.504 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:20:49.504 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:49.504 -07 000000462 INF: FPGA: Recv ZSGSRD 36592
17-03-18 03:20:49.514 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:49.514 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:49.514 -07 000000606 INF: FPGA: Recv ZSGSRD 36583
17-03-18 03:20:49.524 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:49.524 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:49.524 -07 000000590 INF: FPGA: Recv ZSGSRD 36585
17-03-18 03:20:49.534 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:49.534 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:49.534 -07 000000618 INF: FPGA: Recv ZSGSRD 36588
17-03-18 03:20:49.544 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:49.544 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:49.544 -07 000000591 INF: FPGA: Recv ZSGSRD 36584
17-03-18 03:20:49.554 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:49.554 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:49.554 -07 000000629 INF: FPGA: Recv ZSGSRD 36587
17-03-18 03:20:49.564 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:49.564 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:49.564 -07 000000455 INF: FPGA: Recv ZSGSRD 36587
17-03-18 03:20:49.574 -07 000000561 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:49.574 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:49.574 -07 000000591 INF: FPGA: Recv ZSGSRD 36595
17-03-18 03:20:49.584 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:49.584 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:49.584 -07 000000569 INF: FPGA: Recv ZSGSRD 36589
17-03-18 03:20:49.594 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:49.594 -07 000000561 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:49.594 -07 000000467 INF: FPGA: Recv ZPIEZORD 32723
17-03-18 03:20:49.604 -07 000000561 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:49.604 -07 000000561 INF: Z Motor: Piezo is near 49.9 V (nominally 0 to 100 V), expect near 58.5 V, since DAC is at 5.845 V. Piezo Error = -8.5 V.
17-03-18 03:20:49.604 -07 000000561 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.4 um, Read 10 ADC samples: Avg = 36588 (-174.5 uncal um), Error = 0.9 uncal um, Median = 36587 (-174.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36583 (-174.5 uncal um), Max = 36595 (-174.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:20:49.604 -07 000000561 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36588, posNoise = 7, negNoise = 5
17-03-18 03:20:49.604 -07 000000561 INF: Z Motor: After move to -0.175358, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:49.604 -07 000000561 INF: Z Motor: Settle wait time = 1472 ms, measure time = 108 ms (allowed 150 ms), total time = 1580 ms
17-03-18 03:20:49.604 -07 000000561 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:49.654 -07 000000561 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1632 ms
17-03-18 03:20:49.654 -07 000000561 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:49.654 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:49.654 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:49.654 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:49.654 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:49.654 -07 000000569 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:20:49.654 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:49.654 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:49.654 -07 000000569 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:20:49.664 -07 000000569 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:20:49.664 -07 000000569 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:20:49.674 -07 000000569 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 03:20:49.674 -07 000000569 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 19 ms.
17-03-18 03:20:49.674 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:20:49.724 -07 000000606 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:20:50.024 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:20:50.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:20:50.024 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:20:50.024 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) start.
17-03-18 03:20:50.064 -07 000000569 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:20:50.064 -07 000000561 INF: FPGA: Recv CAMSNAP
17-03-18 03:20:50.064 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 384 ms overall
17-03-18 03:20:50.144 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) end. Duration was 114 ms.
17-03-18 03:20:50.144 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:50.144 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:20:50.144 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-18 03:20:50.164 -07 000000430 INF: Autofocus start
17-03-18 03:20:50.164 -07 000000430 INF: MeasureProfile start
17-03-18 03:20:50.164 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:20:50.164 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:20:50.174 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:20:50.174 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:20:50.174 -07 000000430 INF: MeasureProfile done
17-03-18 03:20:50.174 -07 000000430 INF: X=-16  Z correction [um]=-0.1496812
17-03-18 03:20:50.174 -07 000000430 INF: Autofocus finished
17-03-18 03:20:50.374 -07 000000576 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:20:50.374 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-18 03:20:50.374 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02685546875, Z-position -0.175372425853885. ----------
17-03-18 03:20:50.384 -07 000000610 INF: Cycle	111	Tile	12	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:50.384 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36787, sync = True, waitForSettling = True)
17-03-18 03:20:50.384 -07 000000610 INF: Z Motor: Moving to -0.168400 mm, started at -0.175372 mm, distance = 6.97 um
17-03-18 03:20:50.384 -07 000000610 INF: FPGA: Xmit ZDACW 36787\n [Z Motor]
17-03-18 03:20:50.384 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:20:50.394 -07 000000610 INF: FPGA: 'ZDACW 36787' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:20:50.394 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:50.394 -07 000000606 INF: FPGA: Recv ZDACR 36787
17-03-18 03:20:50.404 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:50.404 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:50.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:50.554 -07 000000576 INF: FPGA: Recv ZSGSRD 35509
17-03-18 03:20:50.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:50.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:50.564 -07 000000467 INF: FPGA: Recv ZSGSRD 35504
17-03-18 03:20:50.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:50.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:50.574 -07 000000424 INF: FPGA: Recv ZSGSRD 35508
17-03-18 03:20:50.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:50.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:50.584 -07 000000590 INF: FPGA: Recv ZSGSRD 35499
17-03-18 03:20:50.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:50.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:50.594 -07 000000579 INF: FPGA: Recv ZSGSRD 35509
17-03-18 03:20:50.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:50.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:50.604 -07 000000455 INF: FPGA: Recv ZSGSRD 35505
17-03-18 03:20:50.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:50.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:50.614 -07 000000591 INF: FPGA: Recv ZSGSRD 35508
17-03-18 03:20:50.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:50.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:50.624 -07 000000626 INF: FPGA: Recv ZSGSRD 35506
17-03-18 03:20:50.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:50.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:50.634 -07 000000590 INF: FPGA: Recv ZSGSRD 35511
17-03-18 03:20:50.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:50.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:50.644 -07 000000561 INF: FPGA: Recv ZSGSRD 35506
17-03-18 03:20:50.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:50.654 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:50.654 -07 000000502 INF: FPGA: Recv ZPIEZORD 31262
17-03-18 03:20:50.664 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:50.664 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.613 V. Piezo Error = -9.3 V.
17-03-18 03:20:50.664 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.4 um, Read 10 ADC samples: Avg = 35506 (-167.6 uncal um), Error = 0.8 uncal um, Median = 35507 (-167.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35499 (-167.5 uncal um), Max = 35511 (-167.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:20:50.664 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35506, posNoise = 5, negNoise = 7
17-03-18 03:20:50.664 -07 000000610 INF: Z Motor: After move to -0.168400, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:50.664 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:20:50.664 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:50.664 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:50.664 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:50.664 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:50.664 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:50.664 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:50.664 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:20:50.664 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:50.664 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:50.664 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:50.664 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:50.664 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:20:50.664 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:50.674 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:50.674 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:20:50.674 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:50.674 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:20:50.674 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:20:50.684 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:20:50.684 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:20:50.684 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 36963 150\n [Camera]
17-03-18 03:20:50.884 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:51.284 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:51.284 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:51.284 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:51.284 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:51.284 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:20:51.294 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:51.294 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:51.294 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:51.294 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:51.294 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 03:20:51.484 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36963 789
17-03-18 03:20:51.564 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:51.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:51.624 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:51.664 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:20:51.664 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:20:51.664 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:51.664 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:51.664 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:20:51.664 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:20:51.664 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:51.674 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:51.674 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:20:51.674 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:20:51.824 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:51.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:51.824 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:51.824 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:51.824 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 03:20:51.824 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:51.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:51.824 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:51.824 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:51.824 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 03:20:52.014 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:20:52.014 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:52.014 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 36963 150' command took 2 ms to send, 1326 ms to get response, and 1332 ms overall
17-03-18 03:20:52.014 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.168736
17-03-18 03:20:52.014 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16874 mm
17-03-18 03:20:52.014 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:52.024 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:20:52.024 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 36860, sync = True, waitForSettling = False)
17-03-18 03:20:52.024 -07 000000444 INF: Z Motor: Moving to -0.168734 mm, started at -0.168421 mm, distance = -0.31 um
17-03-18 03:20:52.024 -07 000000444 INF: FPGA: Xmit ZDACW 36860\n [Z Motor]
17-03-18 03:20:52.024 -07 000000590 INF: Y Motor: Moving to 69.8726 mm, started at 69.0269 mm, delta = 0.8458 mm
17-03-18 03:20:52.024 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:20:52.034 -07 000000444 INF: FPGA: 'ZDACW 36860' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:20:52.034 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:52.034 -07 000000502 INF: FPGA: Recv ZDACR 36860
17-03-18 03:20:52.044 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:52.044 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:52.044 -07 000000444 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-18 03:20:52.044 -07 000000461 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:20:52.054 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:20:52.054 -07 000000590 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:52.054 -07 000000590 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:52.054 -07 000000590 INF: Y Motor: Moving 1353 steps-33
17-03-18 03:20:52.054 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:52.224 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 03:20:52.224 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:20:52.224 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:52.224 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 401 ms.
17-03-18 03:20:52.224 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 03:20:52.224 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:52.234 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:52.234 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:20:52.234 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 410 ms.
17-03-18 03:20:52.234 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 03:20:52.424 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 03:20:52.424 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:20:52.474 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:52.474 -07 000000461 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:20:52.484 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:52.484 -07 000000590 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:52.484 -07 000000590 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:20:52.484 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.846 mm, average velocity = 2.237 mm/sec
17-03-18 03:20:53.434 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:53.434 -07 000000569 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:20:53.444 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.444 -07 000000590 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:53.464 -07 000000590 INF: Y Motor: After move to 69.872612, error = -0.009819, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:53.464 -07 000000590 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:20:53.464 -07 000000590 INF: Y Motor: Moved to 69.8628 after 1448 ms (table move)
17-03-18 03:20:53.474 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168734 mm (DAC = 36860)
17-03-18 03:20:53.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.484 -07 000000626 INF: FPGA: Recv ZSGSRD 35555
17-03-18 03:20:53.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:20:53.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.494 -07 000000606 INF: FPGA: Recv ZSGSRD 35560
17-03-18 03:20:53.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.514 -07 000000629 INF: FPGA: Recv ZSGSRD 35549
17-03-18 03:20:53.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:53.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.524 -07 000000424 INF: FPGA: Recv ZSGSRD 35552
17-03-18 03:20:53.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.554 -07 000000618 INF: FPGA: Recv ZSGSRD 35561
17-03-18 03:20:53.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:20:53.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.564 -07 000000606 INF: FPGA: Recv ZSGSRD 35549
17-03-18 03:20:53.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.584 -07 000000561 INF: FPGA: Recv ZSGSRD 35557
17-03-18 03:20:53.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:53.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.594 -07 000000455 INF: FPGA: Recv ZSGSRD 35554
17-03-18 03:20:53.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.604 -07 000000629 INF: FPGA: Recv ZSGSRD 35555
17-03-18 03:20:53.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.614 -07 000000606 INF: FPGA: Recv ZSGSRD 35545
17-03-18 03:20:53.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.624 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:53.624 -07 000000579 INF: FPGA: Recv ZPIEZORD 31363
17-03-18 03:20:53.634 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.634 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.624 V. Piezo Error = -9.2 V.
17-03-18 03:20:53.634 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.7 um, Read 10 ADC samples: Avg = 35554 (-167.9 uncal um), Error = 0.9 uncal um, Median = 35554 (-167.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35545 (-167.8 uncal um), Max = 35561 (-167.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:20:53.634 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35554, posNoise = 7, negNoise = 9
17-03-18 03:20:53.634 -07 000000610 INF: Z Motor: After move to -0.168734, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:53.634 -07 000000610 INF: Z Motor: Settle wait time = 1450 ms, measure time = 159 ms (allowed 150 ms), total time = 1609 ms
17-03-18 03:20:53.634 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 159 ms, longer than max expected time of 150 ms
17-03-18 03:20:53.634 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:20:53.634 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:53.634 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86279296875, Z-position -0.168729790499304. ----------
17-03-18 03:20:53.634 -07 000000610 INF: Cycle	111	Tile	13	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:53.634 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36684, sync = True, waitForSettling = True)
17-03-18 03:20:53.634 -07 000000610 INF: Z Motor: Moving to -0.167929 mm, started at -0.168730 mm, distance = 0.80 um
17-03-18 03:20:53.634 -07 000000610 INF: FPGA: Xmit ZDACW 36684\n [Z Motor]
17-03-18 03:20:53.634 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:20:53.644 -07 000000610 INF: FPGA: 'ZDACW 36684' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:53.644 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:53.644 -07 000000626 INF: FPGA: Recv ZDACR 36684
17-03-18 03:20:53.654 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.654 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:53.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.804 -07 000000561 INF: FPGA: Recv ZSGSRD 35431
17-03-18 03:20:53.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.814 -07 000000606 INF: FPGA: Recv ZSGSRD 35433
17-03-18 03:20:53.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:20:53.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.824 -07 000000461 INF: FPGA: Recv ZSGSRD 35430
17-03-18 03:20:53.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.834 -07 000000430 INF: FPGA: Recv ZSGSRD 35426
17-03-18 03:20:53.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.844 -07 000000444 INF: FPGA: Recv ZSGSRD 35433
17-03-18 03:20:53.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.854 -07 000000626 INF: FPGA: Recv ZSGSRD 35431
17-03-18 03:20:53.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.864 -07 000000576 INF: FPGA: Recv ZSGSRD 35435
17-03-18 03:20:53.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.874 -07 000000629 INF: FPGA: Recv ZSGSRD 35435
17-03-18 03:20:53.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.884 -07 000000606 INF: FPGA: Recv ZSGSRD 35426
17-03-18 03:20:53.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:53.894 -07 000000467 INF: FPGA: Recv ZSGSRD 35435
17-03-18 03:20:53.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.904 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:53.904 -07 000000579 INF: FPGA: Recv ZPIEZORD 31179
17-03-18 03:20:53.914 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:53.914 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.598 V. Piezo Error = -9.4 V.
17-03-18 03:20:53.914 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35432 (-167.1 uncal um), Error = 0.9 uncal um, Median = 35432 (-167.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35426 (-167.0 uncal um), Max = 35435 (-167.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:20:53.914 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35432, posNoise = 3, negNoise = 6
17-03-18 03:20:53.914 -07 000000610 INF: Z Motor: After move to -0.167929, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:53.914 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:20:53.914 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:53.914 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:53.914 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:53.914 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:53.914 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:53.914 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:53.914 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:53.914 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:53.914 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:53.914 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:53.914 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:20:53.914 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:53.914 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:20:53.914 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:53.924 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:20:53.924 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:53.934 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 03:20:53.934 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 03:20:53.934 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 03:20:53.934 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:20:53.934 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 36860 150\n [Camera]
17-03-18 03:20:54.134 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:54.234 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.027603,
17-03-18 03:20:54.544 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:54.544 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:54.544 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:54.544 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:54.544 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:54.544 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:54.544 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:54.544 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) start.
17-03-18 03:20:54.554 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:54.554 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:20:54.734 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36860 789
17-03-18 03:20:54.884 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:54.924 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:20:54.924 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:20:54.924 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:54.924 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:20:54.924 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:20:54.924 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:54.934 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:20:54.934 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:20:54.934 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:20:54.944 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:20:55.074 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:55.084 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:55.084 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:55.084 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:55.084 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:55.084 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:55.084 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:55.084 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:20:55.084 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:55.084 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:20:55.264 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:20:55.274 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:55.274 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 36860 150' command took 2 ms to send, 1320 ms to get response, and 1332 ms overall
17-03-18 03:20:55.274 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.167870
17-03-18 03:20:55.274 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16787 mm
17-03-18 03:20:55.274 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:55.274 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:20:55.274 -07 000000569 INF: Y Motor: Moving to 70.7026 mm, started at 69.8628 mm, delta = 0.8398 mm
17-03-18 03:20:55.274 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 36671, sync = True, waitForSettling = False)
17-03-18 03:20:55.274 -07 000000629 INF: Z Motor: Moving to -0.167869 mm, started at -0.167946 mm, distance = 0.08 um
17-03-18 03:20:55.274 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:55.274 -07 000000461 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:20:55.284 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:55.284 -07 000000569 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:55.284 -07 000000569 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:55.284 -07 000000569 INF: Y Motor: Moving 1344 steps-20
17-03-18 03:20:55.284 -07 000000629 INF: FPGA: Xmit ZDACW 36671\n [Z Motor]
17-03-18 03:20:55.284 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:20:55.294 -07 000000629 INF: FPGA: 'ZDACW 36671' command took 1 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:20:55.294 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:55.304 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:55.304 -07 000000501 INF: FPGA: Recv ZDACR 36671
17-03-18 03:20:55.314 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:55.314 -07 000000629 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 03:20:55.474 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:20:55.474 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:20:55.474 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:55.474 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:20:55.474 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:20:55.474 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:55.474 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:55.474 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:20:55.474 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:20:55.484 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 404 ms.
17-03-18 03:20:55.664 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 03:20:55.664 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:20:55.714 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:55.714 -07 000000512 INF: FPGA: Recv YRDPOS 144768
17-03-18 03:20:55.724 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:20:55.724 -07 000000569 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:55.724 -07 000000569 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:20:55.724 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.840 mm, average velocity = 2.164 mm/sec
17-03-18 03:20:56.564 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:20:56.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:20:56.674 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:56.674 -07 000000444 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:20:56.684 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.684 -07 000000569 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:56.714 -07 000000569 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:56.714 -07 000000569 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:20:56.714 -07 000000569 INF: Y Motor: Moved to 70.6880 after 1435 ms (table move)
17-03-18 03:20:56.714 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167869 mm (DAC = 36671)
17-03-18 03:20:56.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:56.714 -07 000000444 INF: FPGA: Recv ZSGSRD 35419
17-03-18 03:20:56.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:20:56.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:56.724 -07 000000462 INF: FPGA: Recv ZSGSRD 35425
17-03-18 03:20:56.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:56.734 -07 000000606 INF: FPGA: Recv ZSGSRD 35422
17-03-18 03:20:56.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:56.744 -07 000000579 INF: FPGA: Recv ZSGSRD 35422
17-03-18 03:20:56.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:56.754 -07 000000430 INF: FPGA: Recv ZSGSRD 35417
17-03-18 03:20:56.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:56.764 -07 000000561 INF: FPGA: Recv ZSGSRD 35424
17-03-18 03:20:56.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:56.774 -07 000000629 INF: FPGA: Recv ZSGSRD 35419
17-03-18 03:20:56.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:56.784 -07 000000618 INF: FPGA: Recv ZSGSRD 35419
17-03-18 03:20:56.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:56.794 -07 000000467 INF: FPGA: Recv ZSGSRD 35421
17-03-18 03:20:56.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:56.804 -07 000000569 INF: FPGA: Recv ZSGSRD 35426
17-03-18 03:20:56.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.814 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:56.814 -07 000000444 INF: FPGA: Recv ZPIEZORD 31203
17-03-18 03:20:56.824 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.824 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.596 V. Piezo Error = -9.3 V.
17-03-18 03:20:56.824 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35421 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35422 (-167.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35417 (-167.0 uncal um), Max = 35426 (-167.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:20:56.824 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35421, posNoise = 5, negNoise = 4
17-03-18 03:20:56.824 -07 000000610 INF: Z Motor: After move to -0.167869, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:56.824 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 108 ms (allowed 150 ms), total time = 1545 ms
17-03-18 03:20:56.824 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:20:56.874 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-18 03:20:56.874 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:20:56.874 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.16787537028445. ----------
17-03-18 03:20:56.874 -07 000000610 INF: Cycle	111	Tile	14	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:20:56.874 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36494, sync = True, waitForSettling = True)
17-03-18 03:20:56.874 -07 000000610 INF: Z Motor: Moving to -0.167059 mm, started at -0.167875 mm, distance = 0.82 um
17-03-18 03:20:56.874 -07 000000610 INF: FPGA: Xmit ZDACW 36494\n [Z Motor]
17-03-18 03:20:56.874 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:20:56.884 -07 000000610 INF: FPGA: 'ZDACW 36494' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:20:56.884 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:56.884 -07 000000444 INF: FPGA: Recv ZDACR 36494
17-03-18 03:20:56.894 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:56.894 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:20:57.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:57.044 -07 000000579 INF: FPGA: Recv ZSGSRD 35299
17-03-18 03:20:57.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:57.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:57.054 -07 000000569 INF: FPGA: Recv ZSGSRD 35295
17-03-18 03:20:57.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:57.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:57.064 -07 000000455 INF: FPGA: Recv ZSGSRD 35299
17-03-18 03:20:57.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:57.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:57.074 -07 000000462 INF: FPGA: Recv ZSGSRD 35295
17-03-18 03:20:57.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:57.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:57.084 -07 000000430 INF: FPGA: Recv ZSGSRD 35293
17-03-18 03:20:57.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:57.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:57.094 -07 000000444 INF: FPGA: Recv ZSGSRD 35297
17-03-18 03:20:57.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:57.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:57.104 -07 000000591 INF: FPGA: Recv ZSGSRD 35295
17-03-18 03:20:57.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:57.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:57.114 -07 000000576 INF: FPGA: Recv ZSGSRD 35296
17-03-18 03:20:57.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:57.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:57.124 -07 000000462 INF: FPGA: Recv ZSGSRD 35295
17-03-18 03:20:57.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:57.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:57.134 -07 000000569 INF: FPGA: Recv ZSGSRD 35300
17-03-18 03:20:57.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:57.144 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:20:57.144 -07 000000606 INF: FPGA: Recv ZPIEZORD 31009
17-03-18 03:20:57.154 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:57.154 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.569 V. Piezo Error = -9.4 V.
17-03-18 03:20:57.154 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35296 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35296 (-166.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35293 (-166.2 uncal um), Max = 35300 (-166.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:20:57.154 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35296, posNoise = 4, negNoise = 3
17-03-18 03:20:57.154 -07 000000610 INF: Z Motor: After move to -0.167059, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:20:57.154 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:20:57.154 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:20:57.154 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:20:57.154 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:20:57.154 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:20:57.154 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:20:57.154 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:20:57.154 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:20:57.154 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:20:57.154 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:20:57.154 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:20:57.154 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:20:57.154 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:20:57.154 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:20:57.154 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:20:57.164 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:20:57.164 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:20:57.174 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 18 ms.
17-03-18 03:20:57.174 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:20:57.174 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms.
17-03-18 03:20:57.174 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:20:57.184 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 36671 150\n [Camera]
17-03-18 03:20:57.384 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:20:57.784 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:20:57.784 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:20:57.784 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:57.784 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:20:57.784 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:20:57.784 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:57.784 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:57.794 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) start.
17-03-18 03:20:57.794 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:57.794 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:20:57.974 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36671 789
17-03-18 03:20:58.124 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:20:58.184 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:20:58.184 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:20:58.184 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:58.184 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 391 ms.
17-03-18 03:20:58.184 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:20:58.184 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:58.184 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:58.184 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:20:58.184 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:20:58.194 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-18 03:20:58.324 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:20:58.324 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:20:58.324 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:20:58.324 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:20:58.324 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:20:58.324 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:20:58.324 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:20:58.324 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:20:58.334 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:20:58.334 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:20:58.514 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:20:58.514 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:20:58.514 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 36671 150' command took 2 ms to send, 1326 ms to get response, and 1335 ms overall
17-03-18 03:20:58.514 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.167790
17-03-18 03:20:58.514 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16779 mm
17-03-18 03:20:58.514 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:20:58.524 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:20:58.524 -07 000000629 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm
17-03-18 03:20:58.524 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:58.524 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 36654, sync = True, waitForSettling = False)
17-03-18 03:20:58.524 -07 000000467 INF: Z Motor: Moving to -0.167791 mm, started at -0.167072 mm, distance = -0.72 um
17-03-18 03:20:58.524 -07 000000579 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:20:58.534 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:20:58.534 -07 000000629 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:58.534 -07 000000629 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:20:58.534 -07 000000629 INF: Y Motor: Moving 1351 steps-31
17-03-18 03:20:58.534 -07 000000467 INF: FPGA: Xmit ZDACW 36654\n [Z Motor]
17-03-18 03:20:58.534 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:20:58.544 -07 000000467 INF: FPGA: 'ZDACW 36654' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:20:58.544 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:20:58.554 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:20:58.554 -07 000000591 INF: FPGA: Recv ZDACR 36654
17-03-18 03:20:58.564 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:20:58.564 -07 000000467 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-18 03:20:58.704 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:20:58.704 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:20:58.704 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:58.704 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:20:58.704 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:20:58.704 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:20:58.714 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:20:58.714 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:20:58.714 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:20:58.714 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:20:58.914 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:20:58.914 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:20:58.964 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:58.974 -07 000000462 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:20:58.974 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:20:58.974 -07 000000629 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:58.974 -07 000000629 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:20:58.974 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.845 mm, average velocity = 2.177 mm/sec
17-03-18 03:20:59.594 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.994908,
17-03-18 03:20:59.924 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:20:59.924 -07 000000461 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:20:59.934 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:20:59.934 -07 000000629 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:20:59.954 -07 000000629 INF: Y Motor: After move to 71.532608, error = -0.014542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:20:59.954 -07 000000629 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:20:59.964 -07 000000629 INF: Y Motor: Moved to 71.5181 after 1437 ms (table move)
17-03-18 03:20:59.964 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167791 mm (DAC = 36654)
17-03-18 03:20:59.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:59.964 -07 000000430 INF: FPGA: Recv ZSGSRD 35413
17-03-18 03:20:59.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:20:59.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:59.974 -07 000000626 INF: FPGA: Recv ZSGSRD 35409
17-03-18 03:20:59.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:59.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:59.984 -07 000000455 INF: FPGA: Recv ZSGSRD 35413
17-03-18 03:20:59.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:20:59.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:20:59.994 -07 000000606 INF: FPGA: Recv ZSGSRD 35414
17-03-18 03:21:00.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.004 -07 000000461 INF: FPGA: Recv ZSGSRD 35407
17-03-18 03:21:00.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.014 -07 000000561 INF: FPGA: Recv ZSGSRD 35411
17-03-18 03:21:00.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.024 -07 000000424 INF: FPGA: Recv ZSGSRD 35397
17-03-18 03:21:00.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.034 -07 000000444 INF: FPGA: Recv ZSGSRD 35408
17-03-18 03:21:00.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.044 -07 000000606 INF: FPGA: Recv ZSGSRD 35413
17-03-18 03:21:00.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.054 -07 000000591 INF: FPGA: Recv ZSGSRD 35413
17-03-18 03:21:00.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.064 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:00.064 -07 000000430 INF: FPGA: Recv ZPIEZORD 31249
17-03-18 03:21:00.074 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.074 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.593 V. Piezo Error = -9.2 V.
17-03-18 03:21:00.074 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.8 um, Read 10 ADC samples: Avg = 35410 (-166.9 uncal um), Error = 0.9 uncal um, Median = 35412 (-166.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35397 (-166.9 uncal um), Max = 35414 (-167.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 13 (0.1 uncal um)
17-03-18 03:21:00.074 -07 000000610 INF: Z Motor: ADC noise = 13, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35410, posNoise = 4, negNoise = 13
17-03-18 03:21:00.074 -07 000000610 INF: Z Motor: After move to -0.167791, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:00.074 -07 000000610 INF: Z Motor: Settle wait time = 1440 ms, measure time = 107 ms (allowed 150 ms), total time = 1547 ms
17-03-18 03:21:00.074 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:00.124 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-18 03:21:00.124 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:00.124 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51806640625, Z-position -0.16780470395089. ----------
17-03-18 03:21:00.124 -07 000000610 INF: Cycle	111	Tile	15	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:00.124 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36477, sync = True, waitForSettling = True)
17-03-18 03:21:00.124 -07 000000610 INF: Z Motor: Moving to -0.166981 mm, started at -0.167805 mm, distance = 0.82 um
17-03-18 03:21:00.124 -07 000000610 INF: FPGA: Xmit ZDACW 36477\n [Z Motor]
17-03-18 03:21:00.124 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:21:00.134 -07 000000610 INF: FPGA: 'ZDACW 36477' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:00.134 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:00.134 -07 000000512 INF: FPGA: Recv ZDACR 36477
17-03-18 03:21:00.144 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.144 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:00.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.294 -07 000000626 INF: FPGA: Recv ZSGSRD 35285
17-03-18 03:21:00.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:00.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.304 -07 000000579 INF: FPGA: Recv ZSGSRD 35287
17-03-18 03:21:00.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.314 -07 000000462 INF: FPGA: Recv ZSGSRD 35287
17-03-18 03:21:00.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.324 -07 000000606 INF: FPGA: Recv ZSGSRD 35281
17-03-18 03:21:00.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.334 -07 000000618 INF: FPGA: Recv ZSGSRD 35285
17-03-18 03:21:00.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.344 -07 000000430 INF: FPGA: Recv ZSGSRD 35284
17-03-18 03:21:00.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.354 -07 000000461 INF: FPGA: Recv ZSGSRD 35283
17-03-18 03:21:00.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.364 -07 000000512 INF: FPGA: Recv ZSGSRD 35286
17-03-18 03:21:00.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.374 -07 000000502 INF: FPGA: Recv ZSGSRD 35284
17-03-18 03:21:00.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:00.384 -07 000000467 INF: FPGA: Recv ZSGSRD 35284
17-03-18 03:21:00.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.394 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:00.394 -07 000000430 INF: FPGA: Recv ZPIEZORD 31059
17-03-18 03:21:00.404 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:00.404 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.566 V. Piezo Error = -9.3 V.
17-03-18 03:21:00.404 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35285 (-166.1 uncal um), Error = 0.8 uncal um, Median = 35284 (-166.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35281 (-166.1 uncal um), Max = 35287 (-166.1 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:21:00.404 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35285, posNoise = 2, negNoise = 4
17-03-18 03:21:00.404 -07 000000610 INF: Z Motor: After move to -0.166981, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:00.404 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:21:00.404 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:00.404 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:00.404 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:00.404 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:00.404 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:00.404 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:00.404 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:00.404 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:00.404 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:00.404 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:00.404 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:00.404 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:00.404 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:21:00.414 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:00.414 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:21:00.414 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:00.424 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:21:00.424 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:21:00.424 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:21:00.424 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:21:00.424 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 36654 150\n [Camera]
17-03-18 03:21:00.624 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:01.034 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:01.034 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:01.034 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:01.034 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:01.034 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:01.034 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:01.034 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:01.034 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 03:21:01.044 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:01.044 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:21:01.224 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36654 789
17-03-18 03:21:01.374 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:01.424 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:21:01.424 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:21:01.424 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:01.424 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 03:21:01.424 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:21:01.424 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:01.434 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:01.434 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:21:01.434 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:01.444 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 03:21:01.564 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:01.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:01.574 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:01.574 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:01.574 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:01.574 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:01.574 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:01.574 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:01.684 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:01.684 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 03:21:01.694 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:01.694 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 576012080, 0x0, 418435064) start.
17-03-18 03:21:01.764 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:21:01.764 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:01.764 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 36654 150' command took 2 ms to send, 1323 ms to get response, and 1334 ms overall
17-03-18 03:21:01.764 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:21:01.764 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51806640625, Z-Position -0.16700167743317. ------
17-03-18 03:21:01.764 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:21:01.764 -07 000000606 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.17339 mm
17-03-18 03:21:01.764 -07 000000606 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:01.774 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:21:01.774 -07 000000502 INF: Y Motor: Moving to 72.3626 mm, started at 71.5181 mm, delta = 0.8445 mm
17-03-18 03:21:01.774 -07 000000579 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:21:01.774 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:21:01.774 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 37877, sync = True, waitForSettling = False)
17-03-18 03:21:01.774 -07 000000629 INF: Z Motor: Moving to -0.173390 mm, started at -0.167002 mm, distance = -6.39 um
17-03-18 03:21:01.774 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:21:01.784 -07 000000629 INF: FPGA: Xmit ZDACW 37877\n [Z Motor]
17-03-18 03:21:01.784 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:21:01.794 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:01.794 -07 000000629 INF: FPGA: 'ZDACW 37877' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:21:01.794 -07 000000591 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:21:01.804 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-18 03:21:01.804 -07 000000502 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:01.804 -07 000000502 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:01.804 -07 000000502 INF: Y Motor: Moving 1351 steps-30
17-03-18 03:21:01.804 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:01.804 -07 000000618 INF: FPGA: Recv ZDACR 37877
17-03-18 03:21:01.814 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:01.814 -07 000000629 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:21:01.814 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:01.974 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:21:01.974 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 196 ms to get response, and 203 ms overall
17-03-18 03:21:02.064 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:21:02.064 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:21:02.064 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:02.064 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 576012080, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:21:02.064 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:21:02.064 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:02.074 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:21:02.074 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 500 ms.
17-03-18 03:21:02.074 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:21:02.074 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 504 ms.
17-03-18 03:21:02.194 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:21:02.194 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 390 ms overall
17-03-18 03:21:02.234 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:02.244 -07 000000462 INF: FPGA: Recv YRDPOS 148170
17-03-18 03:21:02.244 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:21:02.244 -07 000000502 INF: Y Motor: Encoder = 148170 = motor step 115757.8 = 72.3486 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:02.244 -07 000000502 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:21:02.244 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.845 mm, average velocity = 2.165 mm/sec
17-03-18 03:21:03.194 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:03.194 -07 000000590 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:21:03.204 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:03.204 -07 000000502 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:03.224 -07 000000502 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:03.224 -07 000000502 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:21:03.224 -07 000000502 INF: Y Motor: Moved to 72.3491 after 1457 ms (table move)
17-03-18 03:21:03.234 -07 000000606 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173390 mm (DAC = 37877)
17-03-18 03:21:03.234 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:03.234 -07 000000629 INF: FPGA: Recv ZSGSRD 36286
17-03-18 03:21:03.244 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:03.244 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:03.244 -07 000000618 INF: FPGA: Recv ZSGSRD 36282
17-03-18 03:21:03.254 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:03.254 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:03.254 -07 000000501 INF: FPGA: Recv ZSGSRD 36277
17-03-18 03:21:03.264 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:03.264 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:03.264 -07 000000461 INF: FPGA: Recv ZSGSRD 36276
17-03-18 03:21:03.274 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:03.274 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:03.274 -07 000000502 INF: FPGA: Recv ZSGSRD 36280
17-03-18 03:21:03.284 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:03.284 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:03.284 -07 000000579 INF: FPGA: Recv ZSGSRD 36284
17-03-18 03:21:03.294 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:03.294 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:03.294 -07 000000590 INF: FPGA: Recv ZSGSRD 36283
17-03-18 03:21:03.304 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:03.304 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:03.304 -07 000000561 INF: FPGA: Recv ZSGSRD 36278
17-03-18 03:21:03.314 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:03.314 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:03.314 -07 000000461 INF: FPGA: Recv ZSGSRD 36280
17-03-18 03:21:03.324 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:03.324 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:03.324 -07 000000561 INF: FPGA: Recv ZSGSRD 36286
17-03-18 03:21:03.334 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:03.334 -07 000000606 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:03.334 -07 000000461 INF: FPGA: Recv ZPIEZORD 32383
17-03-18 03:21:03.344 -07 000000606 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:03.344 -07 000000606 INF: Z Motor: Piezo is near 49.2 V (nominally 0 to 100 V), expect near 57.8 V, since DAC is at 5.780 V. Piezo Error = -8.6 V.
17-03-18 03:21:03.344 -07 000000606 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.4 um, Read 10 ADC samples: Avg = 36281 (-172.5 uncal um), Error = 0.9 uncal um, Median = 36281 (-172.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36276 (-172.5 uncal um), Max = 36286 (-172.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:21:03.344 -07 000000606 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36281, posNoise = 5, negNoise = 5
17-03-18 03:21:03.344 -07 000000606 INF: Z Motor: After move to -0.173390, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:03.344 -07 000000606 INF: Z Motor: Settle wait time = 1460 ms, measure time = 107 ms (allowed 150 ms), total time = 1567 ms
17-03-18 03:21:03.344 -07 000000606 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:03.394 -07 000000606 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1620 ms
17-03-18 03:21:03.394 -07 000000606 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:03.394 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:03.394 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:03.394 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:03.394 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:03.394 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:21:03.394 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:03.394 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:21:03.394 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:21:03.404 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:21:03.404 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:21:03.404 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 03:21:03.404 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-18 03:21:03.414 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:21:03.454 -07 000000618 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:21:03.754 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:21:03.754 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:21:03.754 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:21:03.754 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611434344, 0x0, 559484976) start.
17-03-18 03:21:03.794 -07 000000626 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:21:03.794 -07 000000590 INF: FPGA: Recv CAMSNAP
17-03-18 03:21:03.794 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 385 ms overall
17-03-18 03:21:03.874 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611434344, 0x0, 559484976) end. Duration was 118 ms.
17-03-18 03:21:03.874 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:03.874 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:21:03.874 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 121 ms.
17-03-18 03:21:03.894 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:21:03.894 -07 000000502 INF: Autofocus start
17-03-18 03:21:03.894 -07 000000502 INF: MeasureProfile start
17-03-18 03:21:03.894 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:21:03.904 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:03.904 -07 000000606 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:21:03.904 -07 000000502 INF: MeasureProfile done
17-03-18 03:21:03.904 -07 000000502 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:21:03.904 -07 000000502 INF: Autofocus finished
17-03-18 03:21:04.104 -07 000000590 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:21:04.104 -07 000000606 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 192 ms to get response, and 202 ms overall
17-03-18 03:21:04.104 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.173400192726364. ----------
17-03-18 03:21:04.104 -07 000000610 INF: Cycle	111	Tile	16	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:04.114 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36392, sync = True, waitForSettling = True)
17-03-18 03:21:04.114 -07 000000610 INF: Z Motor: Moving to -0.166592 mm, started at -0.173400 mm, distance = 6.81 um
17-03-18 03:21:04.114 -07 000000610 INF: FPGA: Xmit ZDACW 36392\n [Z Motor]
17-03-18 03:21:04.114 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:21:04.124 -07 000000610 INF: FPGA: 'ZDACW 36392' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:04.124 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:04.124 -07 000000590 INF: FPGA: Recv ZDACR 36392
17-03-18 03:21:04.134 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:04.134 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:04.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:04.284 -07 000000462 INF: FPGA: Recv ZSGSRD 35223
17-03-18 03:21:04.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:04.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:04.314 -07 000000591 INF: FPGA: Recv ZSGSRD 35221
17-03-18 03:21:04.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:21:04.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:04.324 -07 000000590 INF: FPGA: Recv ZSGSRD 35226
17-03-18 03:21:04.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:04.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:04.334 -07 000000462 INF: FPGA: Recv ZSGSRD 35224
17-03-18 03:21:04.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:04.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:04.344 -07 000000444 INF: FPGA: Recv ZSGSRD 35220
17-03-18 03:21:04.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:04.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:04.354 -07 000000501 INF: FPGA: Recv ZSGSRD 35219
17-03-18 03:21:04.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:04.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:04.364 -07 000000569 INF: FPGA: Recv ZSGSRD 35229
17-03-18 03:21:04.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:04.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:04.374 -07 000000467 INF: FPGA: Recv ZSGSRD 35227
17-03-18 03:21:04.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:04.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:04.384 -07 000000462 INF: FPGA: Recv ZSGSRD 35219
17-03-18 03:21:04.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:04.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:04.394 -07 000000576 INF: FPGA: Recv ZSGSRD 35225
17-03-18 03:21:04.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:04.404 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:04.404 -07 000000502 INF: FPGA: Recv ZPIEZORD 30979
17-03-18 03:21:04.414 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:04.414 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.553 V. Piezo Error = -9.4 V.
17-03-18 03:21:04.414 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.6 um, Read 10 ADC samples: Avg = 35223 (-165.7 uncal um), Error = 0.9 uncal um, Median = 35224 (-165.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35219 (-165.7 uncal um), Max = 35229 (-165.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:21:04.414 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35223, posNoise = 6, negNoise = 4
17-03-18 03:21:04.414 -07 000000610 INF: Z Motor: After move to -0.166592, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:04.414 -07 000000610 INF: Z Motor: MoveAbsStepped took 300 ms)
17-03-18 03:21:04.414 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:04.414 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:04.414 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:04.414 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:04.414 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:04.414 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:04.414 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:04.414 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:04.414 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:04.414 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:04.414 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:04.414 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:04.414 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:21:04.414 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:04.424 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:21:04.424 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:04.424 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:21:04.424 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:21:04.434 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:21:04.434 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:21:04.434 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 36568 150\n [Camera]
17-03-18 03:21:04.634 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:04.954 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.973092,
17-03-18 03:21:05.034 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:05.034 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:05.034 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:05.034 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:05.044 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:05.044 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:05.044 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:05.044 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:21:05.044 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:05.044 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:21:05.224 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36568 789
17-03-18 03:21:05.374 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:05.414 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:21:05.414 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:21:05.414 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:05.424 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:21:05.424 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:21:05.424 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:05.424 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:05.424 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:21:05.424 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:05.434 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:21:05.574 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:05.574 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:05.574 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:05.574 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:05.574 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:05.574 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:05.584 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:05.584 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:21:05.584 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:05.584 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 03:21:05.764 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:21:05.764 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:05.764 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 36568 150' command took 2 ms to send, 1325 ms to get response, and 1332 ms overall
17-03-18 03:21:05.764 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.167099
17-03-18 03:21:05.764 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16710 mm
17-03-18 03:21:05.764 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:05.774 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:21:05.774 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 36503, sync = True, waitForSettling = False)
17-03-18 03:21:05.774 -07 000000444 INF: Z Motor: Moving to -0.167100 mm, started at -0.166603 mm, distance = -0.50 um
17-03-18 03:21:05.774 -07 000000444 INF: FPGA: Xmit ZDACW 36503\n [Z Motor]
17-03-18 03:21:05.774 -07 000000502 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm
17-03-18 03:21:05.774 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:21:05.784 -07 000000444 INF: FPGA: 'ZDACW 36503' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:05.784 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:05.784 -07 000000512 INF: FPGA: Recv ZDACR 36503
17-03-18 03:21:05.794 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:05.794 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:05.794 -07 000000444 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-18 03:21:05.794 -07 000000569 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:21:05.804 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:21:05.804 -07 000000502 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:05.804 -07 000000502 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:05.804 -07 000000502 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:21:05.804 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:05.964 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:21:05.964 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:21:05.964 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:05.974 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:05.974 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:21:06.084 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 496 ms.
17-03-18 03:21:06.084 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 496 ms.
17-03-18 03:21:06.084 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:06.084 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:06.094 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 512 ms.
17-03-18 03:21:06.174 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 03:21:06.174 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:21:06.224 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:06.224 -07 000000561 INF: FPGA: Recv YRDPOS 149863
17-03-18 03:21:06.234 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:21:06.234 -07 000000502 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:06.234 -07 000000502 INF: Y Motor: Position error before settling (table move) = -35 encoder counts (-0.017 mm)
17-03-18 03:21:06.234 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.843 mm, average velocity = 2.231 mm/sec
17-03-18 03:21:06.564 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:06.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:07.184 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:07.184 -07 000000626 INF: FPGA: Recv YRDPOS 149864
17-03-18 03:21:07.194 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:07.194 -07 000000502 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:07.214 -07 000000502 INF: Y Motor: After move to 73.192604, error = -0.016823, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:07.214 -07 000000502 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:21:07.214 -07 000000502 INF: Y Motor: Moved to 73.1758 after 1448 ms (table move)
17-03-18 03:21:07.224 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167100 mm (DAC = 36503)
17-03-18 03:21:07.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.224 -07 000000461 INF: FPGA: Recv ZSGSRD 35299
17-03-18 03:21:07.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:07.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.234 -07 000000569 INF: FPGA: Recv ZSGSRD 35301
17-03-18 03:21:07.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:07.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.244 -07 000000606 INF: FPGA: Recv ZSGSRD 35307
17-03-18 03:21:07.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.254 -07 000000618 INF: FPGA: Recv ZSGSRD 35305
17-03-18 03:21:07.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.264 -07 000000462 INF: FPGA: Recv ZSGSRD 35298
17-03-18 03:21:07.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.274 -07 000000579 INF: FPGA: Recv ZSGSRD 35302
17-03-18 03:21:07.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.284 -07 000000591 INF: FPGA: Recv ZSGSRD 35298
17-03-18 03:21:07.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.294 -07 000000512 INF: FPGA: Recv ZSGSRD 35293
17-03-18 03:21:07.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.304 -07 000000424 INF: FPGA: Recv ZSGSRD 35301
17-03-18 03:21:07.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.314 -07 000000455 INF: FPGA: Recv ZSGSRD 35300
17-03-18 03:21:07.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.324 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:07.324 -07 000000501 INF: FPGA: Recv ZPIEZORD 31097
17-03-18 03:21:07.334 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.334 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.570 V. Piezo Error = -9.3 V.
17-03-18 03:21:07.334 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35300 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35300 (-166.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35293 (-166.2 uncal um), Max = 35307 (-166.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:21:07.334 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35300, posNoise = 7, negNoise = 7
17-03-18 03:21:07.334 -07 000000610 INF: Z Motor: After move to -0.167100, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:07.334 -07 000000610 INF: Z Motor: Settle wait time = 1451 ms, measure time = 108 ms (allowed 150 ms), total time = 1559 ms
17-03-18 03:21:07.334 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:07.384 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:21:07.384 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:07.384 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17578125, Z-position -0.167098040615297. ----------
17-03-18 03:21:07.384 -07 000000610 INF: Cycle	111	Tile	17	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:07.384 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36326, sync = True, waitForSettling = True)
17-03-18 03:21:07.384 -07 000000610 INF: Z Motor: Moving to -0.166290 mm, started at -0.167098 mm, distance = 0.81 um
17-03-18 03:21:07.384 -07 000000610 INF: FPGA: Xmit ZDACW 36326\n [Z Motor]
17-03-18 03:21:07.384 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:21:07.394 -07 000000610 INF: FPGA: 'ZDACW 36326' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:07.394 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:07.394 -07 000000561 INF: FPGA: Recv ZDACR 36326
17-03-18 03:21:07.404 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.404 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:07.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.554 -07 000000444 INF: FPGA: Recv ZSGSRD 35177
17-03-18 03:21:07.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:07.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.564 -07 000000579 INF: FPGA: Recv ZSGSRD 35179
17-03-18 03:21:07.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.574 -07 000000618 INF: FPGA: Recv ZSGSRD 35178
17-03-18 03:21:07.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.584 -07 000000629 INF: FPGA: Recv ZSGSRD 35169
17-03-18 03:21:07.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.594 -07 000000501 INF: FPGA: Recv ZSGSRD 35176
17-03-18 03:21:07.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.604 -07 000000626 INF: FPGA: Recv ZSGSRD 35179
17-03-18 03:21:07.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:07.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.614 -07 000000569 INF: FPGA: Recv ZSGSRD 35174
17-03-18 03:21:07.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.624 -07 000000590 INF: FPGA: Recv ZSGSRD 35172
17-03-18 03:21:07.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.634 -07 000000462 INF: FPGA: Recv ZSGSRD 35175
17-03-18 03:21:07.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:07.644 -07 000000629 INF: FPGA: Recv ZSGSRD 35183
17-03-18 03:21:07.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.654 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:07.654 -07 000000512 INF: FPGA: Recv ZPIEZORD 30894
17-03-18 03:21:07.664 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:07.664 -07 000000610 INF: Z Motor: Piezo is near 46.0 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.543 V. Piezo Error = -9.4 V.
17-03-18 03:21:07.664 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.3 um, Read 10 ADC samples: Avg = 35176 (-165.4 uncal um), Error = 0.9 uncal um, Median = 35176 (-165.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35169 (-165.4 uncal um), Max = 35183 (-165.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:21:07.664 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35176, posNoise = 7, negNoise = 7
17-03-18 03:21:07.664 -07 000000610 INF: Z Motor: After move to -0.166290, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:07.664 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:21:07.664 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:07.664 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:07.664 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:07.664 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:07.664 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:07.664 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:07.664 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:07.664 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:07.664 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:21:07.664 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:07.664 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:07.664 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:07.674 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:21:07.674 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:07.674 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:21:07.674 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:07.684 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 03:21:07.684 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:21:07.684 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 03:21:07.684 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:21:07.684 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 36503 150\n [Camera]
17-03-18 03:21:07.884 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:08.284 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:08.284 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:08.284 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:08.294 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:08.294 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:08.294 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:08.294 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:08.294 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) start.
17-03-18 03:21:08.294 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:08.294 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:21:08.484 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36503 789
17-03-18 03:21:08.624 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:08.664 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:21:08.664 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:21:08.664 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:08.664 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:21:08.664 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:21:08.664 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:08.674 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:08.674 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:21:08.674 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:21:08.674 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:21:08.824 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:08.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:08.824 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:08.824 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:08.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:08.824 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:08.834 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:08.834 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:21:08.834 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:08.834 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) start.
17-03-18 03:21:09.014 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:21:09.014 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:09.014 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 36503 150' command took 2 ms to send, 1327 ms to get response, and 1334 ms overall
17-03-18 03:21:09.014 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166728
17-03-18 03:21:09.024 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16673 mm
17-03-18 03:21:09.024 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:09.024 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:21:09.024 -07 000000461 INF: Y Motor: Moving to 74.0226 mm, started at 73.1758 mm, delta = 0.8468 mm
17-03-18 03:21:09.024 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:09.024 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 36422, sync = True, waitForSettling = False)
17-03-18 03:21:09.024 -07 000000512 INF: Z Motor: Moving to -0.166729 mm, started at -0.166301 mm, distance = -0.43 um
17-03-18 03:21:09.024 -07 000000501 INF: FPGA: Recv YRDPOS 149864
17-03-18 03:21:09.034 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:09.034 -07 000000461 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:09.034 -07 000000461 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:09.034 -07 000000461 INF: Y Motor: Moving 1355 steps-35
17-03-18 03:21:09.034 -07 000000512 INF: FPGA: Xmit ZDACW 36422\n [Z Motor]
17-03-18 03:21:09.034 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:21:09.044 -07 000000512 INF: FPGA: 'ZDACW 36422' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:21:09.044 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:09.044 -07 000000629 INF: FPGA: Recv ZDACR 36422
17-03-18 03:21:09.054 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:09.054 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:09.054 -07 000000512 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 03:21:09.214 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:21:09.214 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:21:09.214 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:09.214 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:21:09.214 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:21:09.214 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:09.214 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:09.214 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:21:09.214 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:09.224 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:21:09.424 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:21:09.424 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:21:09.464 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:09.464 -07 000000579 INF: FPGA: Recv YRDPOS 151567
17-03-18 03:21:09.474 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:09.474 -07 000000461 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:09.474 -07 000000461 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:21:09.474 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.847 mm, average velocity = 2.133 mm/sec
17-03-18 03:21:10.314 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.989471,
17-03-18 03:21:10.424 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:10.424 -07 000000444 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:21:10.434 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:10.434 -07 000000461 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:10.454 -07 000000461 INF: Y Motor: After move to 74.022606, error = -0.014793, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:10.454 -07 000000461 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:21:10.454 -07 000000461 INF: Y Motor: Moved to 74.0078 after 1428 ms (table move)
17-03-18 03:21:10.454 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166729 mm (DAC = 36422)
17-03-18 03:21:10.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.454 -07 000000455 INF: FPGA: Recv ZSGSRD 35245
17-03-18 03:21:10.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:10.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.464 -07 000000424 INF: FPGA: Recv ZSGSRD 35242
17-03-18 03:21:10.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.474 -07 000000512 INF: FPGA: Recv ZSGSRD 35246
17-03-18 03:21:10.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.484 -07 000000462 INF: FPGA: Recv ZSGSRD 35246
17-03-18 03:21:10.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.494 -07 000000430 INF: FPGA: Recv ZSGSRD 35246
17-03-18 03:21:10.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.504 -07 000000591 INF: FPGA: Recv ZSGSRD 35243
17-03-18 03:21:10.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.514 -07 000000424 INF: FPGA: Recv ZSGSRD 35239
17-03-18 03:21:10.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.524 -07 000000569 INF: FPGA: Recv ZSGSRD 35241
17-03-18 03:21:10.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.534 -07 000000626 INF: FPGA: Recv ZSGSRD 35242
17-03-18 03:21:10.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.544 -07 000000576 INF: FPGA: Recv ZSGSRD 35242
17-03-18 03:21:10.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.554 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:10.554 -07 000000579 INF: FPGA: Recv ZPIEZORD 30997
17-03-18 03:21:10.564 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.564 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.558 V. Piezo Error = -9.4 V.
17-03-18 03:21:10.564 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.7 um, Read 10 ADC samples: Avg = 35243 (-165.9 uncal um), Error = 0.9 uncal um, Median = 35242 (-165.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35239 (-165.8 uncal um), Max = 35246 (-165.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:21:10.564 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35243, posNoise = 3, negNoise = 4
17-03-18 03:21:10.564 -07 000000610 INF: Z Motor: After move to -0.166729, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:10.564 -07 000000610 INF: Z Motor: Settle wait time = 1429 ms, measure time = 107 ms (allowed 150 ms), total time = 1536 ms
17-03-18 03:21:10.564 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:10.614 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1589 ms
17-03-18 03:21:10.614 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:10.614 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0078125, Z-position -0.166731860523216. ----------
17-03-18 03:21:10.614 -07 000000610 INF: Cycle	111	Tile	18	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:10.614 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36245, sync = True, waitForSettling = True)
17-03-18 03:21:10.614 -07 000000610 INF: Z Motor: Moving to -0.165919 mm, started at -0.166732 mm, distance = 0.81 um
17-03-18 03:21:10.614 -07 000000610 INF: FPGA: Xmit ZDACW 36245\n [Z Motor]
17-03-18 03:21:10.614 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:21:10.624 -07 000000610 INF: FPGA: 'ZDACW 36245' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:10.624 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:10.624 -07 000000444 INF: FPGA: Recv ZDACR 36245
17-03-18 03:21:10.634 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.634 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:10.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.784 -07 000000462 INF: FPGA: Recv ZSGSRD 35116
17-03-18 03:21:10.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:10.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.794 -07 000000501 INF: FPGA: Recv ZSGSRD 35124
17-03-18 03:21:10.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.804 -07 000000591 INF: FPGA: Recv ZSGSRD 35123
17-03-18 03:21:10.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.814 -07 000000424 INF: FPGA: Recv ZSGSRD 35119
17-03-18 03:21:10.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.824 -07 000000430 INF: FPGA: Recv ZSGSRD 35116
17-03-18 03:21:10.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.834 -07 000000576 INF: FPGA: Recv ZSGSRD 35116
17-03-18 03:21:10.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.844 -07 000000424 INF: FPGA: Recv ZSGSRD 35115
17-03-18 03:21:10.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.854 -07 000000512 INF: FPGA: Recv ZSGSRD 35115
17-03-18 03:21:10.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.864 -07 000000561 INF: FPGA: Recv ZSGSRD 35113
17-03-18 03:21:10.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:10.874 -07 000000618 INF: FPGA: Recv ZSGSRD 35123
17-03-18 03:21:10.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.884 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:10.884 -07 000000502 INF: FPGA: Recv ZPIEZORD 30826
17-03-18 03:21:10.894 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:10.894 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.531 V. Piezo Error = -9.5 V.
17-03-18 03:21:10.894 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.9 um, Read 10 ADC samples: Avg = 35118 (-165.1 uncal um), Error = 0.9 uncal um, Median = 35116 (-165.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35113 (-165.0 uncal um), Max = 35124 (-165.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:21:10.894 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35118, posNoise = 6, negNoise = 5
17-03-18 03:21:10.894 -07 000000610 INF: Z Motor: After move to -0.165919, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:10.894 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:21:10.894 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:10.894 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:10.894 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:10.894 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:10.894 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:10.894 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:10.894 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:10.894 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:10.894 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:21:10.894 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:10.894 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:10.894 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:10.894 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:21:10.894 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:10.904 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:21:10.904 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:10.914 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:21:10.914 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:21:10.914 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:21:10.914 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:21:10.924 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 36422 150\n [Camera]
17-03-18 03:21:11.124 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:11.524 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:11.524 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:11.524 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:11.524 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:11.524 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:11.524 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:11.524 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:11.524 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:21:11.534 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:11.534 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) start.
17-03-18 03:21:11.564 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:11.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:11.724 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36422 790
17-03-18 03:21:11.864 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:11.904 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:21:11.904 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:21:11.904 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:11.904 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:21:11.904 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:21:11.904 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:11.904 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:11.904 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:11.904 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:21:11.914 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:21:12.064 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:12.064 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:12.064 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:12.064 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:12.064 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:21:12.064 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:12.064 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:12.064 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:12.064 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:12.064 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:21:12.254 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:21:12.254 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:12.254 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 36422 150' command took 2 ms to send, 1323 ms to get response, and 1333 ms overall
17-03-18 03:21:12.254 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.165762
17-03-18 03:21:12.254 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16576 mm
17-03-18 03:21:12.254 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:12.254 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:21:12.254 -07 000000579 INF: Y Motor: Moving to 74.8526 mm, started at 74.0078 mm, delta = 0.8448 mm
17-03-18 03:21:12.264 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:12.264 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 36211, sync = True, waitForSettling = False)
17-03-18 03:21:12.264 -07 000000591 INF: Z Motor: Moving to -0.165763 mm, started at -0.165929 mm, distance = 0.17 um
17-03-18 03:21:12.264 -07 000000590 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:21:12.274 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:12.274 -07 000000579 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:12.274 -07 000000579 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:12.274 -07 000000579 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:21:12.274 -07 000000591 INF: FPGA: Xmit ZDACW 36211\n [Z Motor]
17-03-18 03:21:12.274 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:21:12.284 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:12.284 -07 000000591 INF: FPGA: 'ZDACW 36211' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:12.294 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:12.294 -07 000000576 INF: FPGA: Recv ZDACR 36211
17-03-18 03:21:12.304 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:12.304 -07 000000591 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-18 03:21:12.444 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:21:12.444 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:21:12.444 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:12.444 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:21:12.444 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:21:12.444 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:12.454 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:21:12.454 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:21:12.454 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:12.454 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:21:12.654 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 03:21:12.654 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:21:12.694 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:12.694 -07 000000461 INF: FPGA: Recv YRDPOS 153254
17-03-18 03:21:12.704 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:12.704 -07 000000579 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:12.704 -07 000000579 INF: Y Motor: Position error before settling (table move) = -44 encoder counts (-0.021 mm)
17-03-18 03:21:12.704 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.845 mm, average velocity = 2.183 mm/sec
17-03-18 03:21:13.654 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:13.654 -07 000000502 INF: FPGA: Recv YRDPOS 153254
17-03-18 03:21:13.664 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:13.664 -07 000000579 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:13.674 -07 000000579 INF: Y Motor: After move to 74.852608, error = -0.021553, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:13.674 -07 000000579 INF: Y Motor: Position error after settling (table move) = -44 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:21:13.674 -07 000000579 INF: Y Motor: Moved to 74.8311 after 1419 ms (table move)
17-03-18 03:21:13.684 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.165763 mm (DAC = 36211)
17-03-18 03:21:13.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:13.684 -07 000000462 INF: FPGA: Recv ZSGSRD 35099
17-03-18 03:21:13.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:21:13.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:13.694 -07 000000430 INF: FPGA: Recv ZSGSRD 35089
17-03-18 03:21:13.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:13.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:13.704 -07 000000576 INF: FPGA: Recv ZSGSRD 35088
17-03-18 03:21:13.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:13.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:13.714 -07 000000606 INF: FPGA: Recv ZSGSRD 35097
17-03-18 03:21:13.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:13.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:13.724 -07 000000467 INF: FPGA: Recv ZSGSRD 35093
17-03-18 03:21:13.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:13.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:13.734 -07 000000590 INF: FPGA: Recv ZSGSRD 35097
17-03-18 03:21:13.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:13.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:13.744 -07 000000629 INF: FPGA: Recv ZSGSRD 35099
17-03-18 03:21:13.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:13.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:13.754 -07 000000618 INF: FPGA: Recv ZSGSRD 35096
17-03-18 03:21:13.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:13.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:13.764 -07 000000561 INF: FPGA: Recv ZSGSRD 35102
17-03-18 03:21:13.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:13.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:13.774 -07 000000626 INF: FPGA: Recv ZSGSRD 35093
17-03-18 03:21:13.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:13.784 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:13.784 -07 000000462 INF: FPGA: Recv ZPIEZORD 30815
17-03-18 03:21:13.794 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:13.794 -07 000000610 INF: Z Motor: Piezo is near 45.8 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.525 V. Piezo Error = -9.4 V.
17-03-18 03:21:13.794 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.8 um, Read 10 ADC samples: Avg = 35095 (-164.9 uncal um), Error = 0.8 uncal um, Median = 35096 (-164.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35088 (-164.9 uncal um), Max = 35102 (-165.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:21:13.794 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35095, posNoise = 7, negNoise = 7
17-03-18 03:21:13.794 -07 000000610 INF: Z Motor: After move to -0.165763, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:13.794 -07 000000610 INF: Z Motor: Settle wait time = 1421 ms, measure time = 111 ms (allowed 150 ms), total time = 1532 ms
17-03-18 03:21:13.794 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:13.834 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1572 ms
17-03-18 03:21:13.834 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:13.834 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.8310546875, Z-position -0.165781077126236. ----------
17-03-18 03:21:13.834 -07 000000610 INF: Cycle	111	Tile	19	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:13.834 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36034, sync = True, waitForSettling = True)
17-03-18 03:21:13.834 -07 000000610 INF: Z Motor: Moving to -0.164953 mm, started at -0.165781 mm, distance = 0.83 um
17-03-18 03:21:13.834 -07 000000610 INF: FPGA: Xmit ZDACW 36034\n [Z Motor]
17-03-18 03:21:13.834 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:21:13.844 -07 000000610 INF: FPGA: 'ZDACW 36034' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:13.844 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:13.844 -07 000000579 INF: FPGA: Recv ZDACR 36034
17-03-18 03:21:13.854 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:13.854 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:14.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:14.004 -07 000000467 INF: FPGA: Recv ZSGSRD 34965
17-03-18 03:21:14.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:14.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:14.014 -07 000000569 INF: FPGA: Recv ZSGSRD 34969
17-03-18 03:21:14.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:14.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:14.024 -07 000000444 INF: FPGA: Recv ZSGSRD 34967
17-03-18 03:21:14.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:14.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:14.034 -07 000000430 INF: FPGA: Recv ZSGSRD 34970
17-03-18 03:21:14.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:14.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:14.044 -07 000000579 INF: FPGA: Recv ZSGSRD 34967
17-03-18 03:21:14.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:14.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:14.054 -07 000000576 INF: FPGA: Recv ZSGSRD 34974
17-03-18 03:21:14.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:14.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:14.064 -07 000000461 INF: FPGA: Recv ZSGSRD 34964
17-03-18 03:21:14.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:14.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:14.074 -07 000000618 INF: FPGA: Recv ZSGSRD 34970
17-03-18 03:21:14.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:14.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:14.084 -07 000000606 INF: FPGA: Recv ZSGSRD 34967
17-03-18 03:21:14.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:14.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:14.094 -07 000000626 INF: FPGA: Recv ZSGSRD 34967
17-03-18 03:21:14.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:14.104 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:14.104 -07 000000462 INF: FPGA: Recv ZPIEZORD 30633
17-03-18 03:21:14.114 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:14.114 -07 000000610 INF: Z Motor: Piezo is near 45.4 V (nominally 0 to 100 V), expect near 55.0 V, since DAC is at 5.498 V. Piezo Error = -9.5 V.
17-03-18 03:21:14.114 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.0 um, Read 10 ADC samples: Avg = 34968 (-164.1 uncal um), Error = 0.9 uncal um, Median = 34967 (-164.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 34964 (-164.1 uncal um), Max = 34974 (-164.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:21:14.114 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34968, posNoise = 6, negNoise = 4
17-03-18 03:21:14.114 -07 000000610 INF: Z Motor: After move to -0.164953, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:14.114 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 03:21:14.114 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:14.114 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:14.114 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:14.114 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:14.114 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:14.114 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:14.114 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:14.114 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:14.114 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:14.114 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:14.114 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:14.114 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:14.124 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:21:14.124 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:14.124 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:21:14.124 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:14.134 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:21:14.134 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:21:14.134 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:21:14.134 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:21:14.144 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 36211 150\n [Camera]
17-03-18 03:21:14.344 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:14.744 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:14.744 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:14.744 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:14.744 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:14.744 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:21:14.744 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:14.744 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:14.744 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:14.744 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:14.744 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 03:21:14.934 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36211 789
17-03-18 03:21:15.084 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:15.144 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 398 ms.
17-03-18 03:21:15.144 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:21:15.144 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:15.144 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 03:21:15.144 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:21:15.144 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:15.144 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:15.144 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 03:21:15.154 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:15.154 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 03:21:15.284 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:15.284 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:15.284 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:15.404 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:15.404 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:15.404 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:15.404 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:15.404 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) start.
17-03-18 03:21:15.404 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:15.404 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:21:15.474 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:21:15.474 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:15.474 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 36211 150' command took 2 ms to send, 1323 ms to get response, and 1332 ms overall
17-03-18 03:21:15.724 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.993549,
17-03-18 03:21:15.784 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:21:15.784 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:21:15.784 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:15.784 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:21:15.784 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:21:15.784 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:15.784 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:21:15.784 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 506 ms.
17-03-18 03:21:15.784 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:21:15.784 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:21:15.794 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:21:15.834 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:21:15.834 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:21:15.874 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 03:21:15.874 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-18 03:21:15.874 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:21:15.874 -07 000000512 INF: FPGA: Recv EMCUR 
17-03-18 03:21:15.884 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:15.884 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-18 03:21:16.384 -07 000000606 INF: FPGA: Recv EMIN
17-03-18 03:21:16.384 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 03:21:16.384 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-18 03:21:16.384 -07 000000561 INF: FPGA: Recv EMCUR 
17-03-18 03:21:16.394 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:16.394 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:21:16.394 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.8310546875, Z-Position -0.164965202184232. ------
17-03-18 03:21:16.394 -07 000000424 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13950 mm
17-03-18 03:21:16.394 -07 000000424 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:16.394 -07 000000502 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:21:16.394 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:21:16.394 -07 000000606 INF: Y Motor: Moving to 59.9126 mm, started at 74.8311 mm, delta = -14.9184 mm
17-03-18 03:21:16.404 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:16.404 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 30475, sync = True, waitForSettling = False)
17-03-18 03:21:16.404 -07 000000461 INF: Z Motor: Moving to -0.139506 mm, started at -0.164965 mm, distance = 25.46 um
17-03-18 03:21:16.404 -07 000000467 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:21:16.404 -07 000000502 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:21:16.404 -07 000000462 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:21:16.414 -07 000000461 INF: FPGA: Xmit ZDACW 30475\n [Z Motor]
17-03-18 03:21:16.414 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:16.414 -07 000000606 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:16.414 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:21:16.424 -07 000000502 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:21:16.424 -07 000000461 INF: FPGA: 'ZDACW 30475' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:16.424 -07 000000606 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-18 03:21:16.424 -07 000000606 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:21:16.434 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:16.434 -07 000000626 INF: FPGA: Recv ZDACR 30475
17-03-18 03:21:16.444 -07 000000606 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:21:16.444 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:16.444 -07 000000461 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 03:21:16.564 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:16.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:16.624 -07 000000591 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:21:16.624 -07 000000502 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall
17-03-18 03:21:18.064 -07 000000591 INF: FPGA: Recv YMVTO 122703 23903
17-03-18 03:21:18.064 -07 000000606 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1618 ms to get response, and 1647 ms overall
17-03-18 03:21:18.064 -07 000000606 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:21:18.064 -07 000000606 INF: Y Motor: To move from 74.832 to 59.913 (-14.918 mm) should take 23871 steps, but required 23903 steps (14.939 mm). Slippage = 0.020 mm (0.00%).
17-03-18 03:21:18.064 -07 000000606 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1647 ms, distance = 14.918 mm, average velocity = 9.058 mm/sec
17-03-18 03:21:20.914 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:20.914 -07 000000430 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:21:20.924 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:20.924 -07 000000606 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:20.954 -07 000000606 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:20.954 -07 000000606 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm)
17-03-18 03:21:20.954 -07 000000606 INF: Y Motor: Moved to 59.9106 after 4558 ms
17-03-18 03:21:20.964 -07 000000424 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139506 mm (DAC = 30475)
17-03-18 03:21:20.964 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:20.964 -07 000000501 INF: FPGA: Recv ZSGSRD 31005
17-03-18 03:21:20.974 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:20.974 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:20.974 -07 000000569 INF: FPGA: Recv ZSGSRD 31005
17-03-18 03:21:20.984 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:20.984 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:20.984 -07 000000591 INF: FPGA: Recv ZSGSRD 31005
17-03-18 03:21:20.994 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:20.994 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:20.994 -07 000000430 INF: FPGA: Recv ZSGSRD 31007
17-03-18 03:21:21.004 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:21.004 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:21.004 -07 000000455 INF: FPGA: Recv ZSGSRD 31005
17-03-18 03:21:21.014 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:21.014 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:21.014 -07 000000618 INF: FPGA: Recv ZSGSRD 31011
17-03-18 03:21:21.024 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:21.024 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:21.024 -07 000000569 INF: FPGA: Recv ZSGSRD 31004
17-03-18 03:21:21.034 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:21.034 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:21.034 -07 000000591 INF: FPGA: Recv ZSGSRD 31006
17-03-18 03:21:21.044 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:21.044 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:21.044 -07 000000430 INF: FPGA: Recv ZSGSRD 31010
17-03-18 03:21:21.054 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:21.054 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:21.054 -07 000000629 INF: FPGA: Recv ZSGSRD 31005
17-03-18 03:21:21.064 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:21.064 -07 000000424 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:21.064 -07 000000618 INF: FPGA: Recv ZPIEZORD 26464
17-03-18 03:21:21.074 -07 000000424 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:21.074 -07 000000424 INF: Z Motor: Piezo is near 36.5 V (nominally 0 to 100 V), expect near 46.5 V, since DAC is at 4.650 V. Piezo Error = -10.0 V.
17-03-18 03:21:21.074 -07 000000424 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.5 um, Read 10 ADC samples: Avg = 31006 (-138.7 uncal um), Error = 0.8 uncal um, Median = 31005 (-138.7 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 31004 (-138.7 uncal um), Max = 31011 (-138.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-18 03:21:21.074 -07 000000424 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31006, posNoise = 5, negNoise = 2
17-03-18 03:21:21.074 -07 000000424 INF: Z Motor: After move to -0.139506, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:21.074 -07 000000424 INF: Z Motor: Settle wait time = 4560 ms, measure time = 110 ms (allowed 150 ms), total time = 4670 ms
17-03-18 03:21:21.074 -07 000000424 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:21.084 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.990831,
17-03-18 03:21:21.114 -07 000000424 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4712 ms
17-03-18 03:21:21.114 -07 000000424 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:21.114 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:21.114 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:21.114 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:21.114 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:21.114 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:21:21.114 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:21.114 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:21.114 -07 000000626 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:21:21.144 -07 000000626 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 03:21:21.144 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:21:21.144 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:21:21.144 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:21:21.164 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 03:21:21.164 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms.
17-03-18 03:21:21.164 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:21:21.214 -07 000000430 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:21:21.514 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:21:21.514 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:21:21.514 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:21:21.514 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611434344, 0x0, 559484976) start.
17-03-18 03:21:21.544 -07 000000626 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:21:21.554 -07 000000462 INF: FPGA: Recv CAMSNAP
17-03-18 03:21:21.554 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 387 ms overall
17-03-18 03:21:21.564 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:21.624 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611434344, 0x0, 559484976) end. Duration was 114 ms.
17-03-18 03:21:21.624 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:21.624 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:21:21.624 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-18 03:21:21.634 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:21.654 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:21:21.654 -07 000000629 INF: Image SNR check: start
17-03-18 03:21:21.654 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:21:21.664 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:21.664 -07 000000618 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:21:21.664 -07 000000629 INF: Image SNR check: pass  [peak (Max-Min)=139.71]
17-03-18 03:21:21.664 -07 000000629 INF: Autofocus start
17-03-18 03:21:21.664 -07 000000629 INF: MeasureProfile start
17-03-18 03:21:21.684 -07 000000629 INF: MeasureProfile done
17-03-18 03:21:21.684 -07 000000629 INF: X=32  Z correction [um]=0.1299841
17-03-18 03:21:21.684 -07 000000629 INF: Autofocus finished
17-03-18 03:21:21.864 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:21:21.864 -07 000000618 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:21:21.864 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.139512473678575. ----------
17-03-18 03:21:21.864 -07 000000610 INF: Cycle	111	Tile	1	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:21.874 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29016, sync = True, waitForSettling = True)
17-03-18 03:21:21.874 -07 000000610 INF: Z Motor: Moving to -0.132827 mm, started at -0.139512 mm, distance = 6.69 um
17-03-18 03:21:21.874 -07 000000610 INF: FPGA: Xmit ZDACW 29016\n [Z Motor]
17-03-18 03:21:21.874 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:21:21.884 -07 000000610 INF: FPGA: 'ZDACW 29016' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:21:21.884 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:21.884 -07 000000424 INF: FPGA: Recv ZDACR 29016
17-03-18 03:21:21.894 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:21.894 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:22.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:22.044 -07 000000579 INF: FPGA: Recv ZSGSRD 29963
17-03-18 03:21:22.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:22.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:22.054 -07 000000606 INF: FPGA: Recv ZSGSRD 29961
17-03-18 03:21:22.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:22.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:22.064 -07 000000501 INF: FPGA: Recv ZSGSRD 29973
17-03-18 03:21:22.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:22.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:22.074 -07 000000569 INF: FPGA: Recv ZSGSRD 29962
17-03-18 03:21:22.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:22.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:22.084 -07 000000424 INF: FPGA: Recv ZSGSRD 29965
17-03-18 03:21:22.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:22.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:22.094 -07 000000502 INF: FPGA: Recv ZSGSRD 29959
17-03-18 03:21:22.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:22.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:22.104 -07 000000444 INF: FPGA: Recv ZSGSRD 29963
17-03-18 03:21:22.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:22.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:22.114 -07 000000455 INF: FPGA: Recv ZSGSRD 29973
17-03-18 03:21:22.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:22.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:22.124 -07 000000569 INF: FPGA: Recv ZSGSRD 29958
17-03-18 03:21:22.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:22.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:22.134 -07 000000461 INF: FPGA: Recv ZSGSRD 29968
17-03-18 03:21:22.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:22.144 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:22.144 -07 000000579 INF: FPGA: Recv ZPIEZORD 25399
17-03-18 03:21:22.154 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:22.154 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.428 V. Piezo Error = -10.0 V.
17-03-18 03:21:22.154 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.8 um, Read 10 ADC samples: Avg = 29964 (-132.0 uncal um), Error = 0.8 uncal um, Median = 29963 (-132.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29958 (-132.0 uncal um), Max = 29973 (-132.1 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:21:22.154 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29964, posNoise = 9, negNoise = 6
17-03-18 03:21:22.154 -07 000000610 INF: Z Motor: After move to -0.132827, error = 0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:22.154 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:21:22.154 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:22.154 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:22.154 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:22.154 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:22.154 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:22.154 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:22.154 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:22.154 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:22.154 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:22.154 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:22.154 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:22.154 -07 000000576 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:21:22.164 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:21:22.164 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:22.174 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:21:22.174 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:21:22.184 -07 000000576 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-18 03:21:22.184 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:22.184 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:21:22.184 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:22.194 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:21:22.194 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 33 ms.
17-03-18 03:21:22.194 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 29192 150\n [Camera]
17-03-18 03:21:22.394 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:22.794 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:22.794 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:22.794 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:22.794 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:22.804 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:22.804 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:22.804 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:22.804 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:21:22.804 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:22.804 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:21:22.984 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29192 789
17-03-18 03:21:23.134 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:23.174 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 367 ms.
17-03-18 03:21:23.174 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 367 ms.
17-03-18 03:21:23.174 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:23.174 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:21:23.174 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:21:23.174 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:23.174 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:23.184 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:23.184 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:21:23.184 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:21:23.334 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:23.334 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:23.334 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:23.444 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:23.444 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:23.444 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:23.454 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:23.454 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) start.
17-03-18 03:21:23.454 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:23.454 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:21:23.524 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:21:23.524 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:23.524 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 29192 150' command took 2 ms to send, 1325 ms to get response, and 1333 ms overall
17-03-18 03:21:23.524 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.133300
17-03-18 03:21:23.524 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13330 mm
17-03-18 03:21:23.524 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:23.534 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:21:23.534 -07 000000591 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-18 03:21:23.534 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 29119, sync = True, waitForSettling = False)
17-03-18 03:21:23.534 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:23.534 -07 000000461 INF: Z Motor: Moving to -0.133298 mm, started at -0.132818 mm, distance = -0.48 um
17-03-18 03:21:23.534 -07 000000444 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:21:23.544 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:23.544 -07 000000591 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:23.544 -07 000000591 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:23.544 -07 000000591 INF: Y Motor: Moving 1331 steps2
17-03-18 03:21:23.544 -07 000000461 INF: FPGA: Xmit ZDACW 29119\n [Z Motor]
17-03-18 03:21:23.544 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:21:23.554 -07 000000461 INF: FPGA: 'ZDACW 29119' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:23.554 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:23.554 -07 000000444 INF: FPGA: Recv ZDACR 29119
17-03-18 03:21:23.564 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:23.564 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:23.564 -07 000000461 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 03:21:23.844 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) end. Duration was 393 ms.
17-03-18 03:21:23.844 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:21:23.844 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:23.844 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 393 ms.
17-03-18 03:21:23.844 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:21:23.844 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:23.854 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:23.854 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 515 ms.
17-03-18 03:21:23.854 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:23.854 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 03:21:23.934 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:21:23.934 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:21:23.974 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:23.974 -07 000000462 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:21:23.984 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:23.984 -07 000000591 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:23.984 -07 000000591 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:21:23.984 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.832 mm, average velocity = 2.090 mm/sec
17-03-18 03:21:24.934 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:24.934 -07 000000461 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:21:24.944 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:24.944 -07 000000591 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:24.974 -07 000000591 INF: Y Motor: After move to 60.742607, error = -0.009697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:24.974 -07 000000591 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:21:24.974 -07 000000591 INF: Y Motor: Moved to 60.7329 after 1441 ms (table move)
17-03-18 03:21:24.974 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133298 mm (DAC = 29119)
17-03-18 03:21:24.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:24.974 -07 000000561 INF: FPGA: Recv ZSGSRD 30045
17-03-18 03:21:24.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:24.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:24.984 -07 000000512 INF: FPGA: Recv ZSGSRD 30038
17-03-18 03:21:24.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:24.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:24.994 -07 000000461 INF: FPGA: Recv ZSGSRD 30034
17-03-18 03:21:25.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.004 -07 000000618 INF: FPGA: Recv ZSGSRD 30051
17-03-18 03:21:25.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.014 -07 000000502 INF: FPGA: Recv ZSGSRD 30047
17-03-18 03:21:25.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.024 -07 000000462 INF: FPGA: Recv ZSGSRD 30038
17-03-18 03:21:25.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.034 -07 000000501 INF: FPGA: Recv ZSGSRD 30036
17-03-18 03:21:25.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.044 -07 000000455 INF: FPGA: Recv ZSGSRD 30031
17-03-18 03:21:25.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.054 -07 000000467 INF: FPGA: Recv ZSGSRD 30044
17-03-18 03:21:25.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.064 -07 000000502 INF: FPGA: Recv ZSGSRD 30037
17-03-18 03:21:25.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.074 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:25.074 -07 000000462 INF: FPGA: Recv ZPIEZORD 25542
17-03-18 03:21:25.084 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.084 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.443 V. Piezo Error = -9.9 V.
17-03-18 03:21:25.084 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.3 um, Read 10 ADC samples: Avg = 30040 (-132.5 uncal um), Error = 0.8 uncal um, Median = 30038 (-132.5 uncal um), StdDev = 6 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 30031 (-132.5 uncal um), Max = 30051 (-132.6 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:21:25.084 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30040, posNoise = 11, negNoise = 9
17-03-18 03:21:25.084 -07 000000610 INF: Z Motor: After move to -0.133298, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:25.084 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 107 ms (allowed 150 ms), total time = 1550 ms
17-03-18 03:21:25.084 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:25.134 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms
17-03-18 03:21:25.134 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:25.134 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73291015625, Z-position -0.133306684749634. ----------
17-03-18 03:21:25.134 -07 000000610 INF: Cycle	111	Tile	2	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:25.134 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28943, sync = True, waitForSettling = True)
17-03-18 03:21:25.134 -07 000000610 INF: Z Motor: Moving to -0.132493 mm, started at -0.133307 mm, distance = 0.81 um
17-03-18 03:21:25.134 -07 000000610 INF: FPGA: Xmit ZDACW 28943\n [Z Motor]
17-03-18 03:21:25.134 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:21:25.144 -07 000000610 INF: FPGA: 'ZDACW 28943' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:21:25.144 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:25.144 -07 000000576 INF: FPGA: Recv ZDACR 28943
17-03-18 03:21:25.154 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.154 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:25.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.304 -07 000000618 INF: FPGA: Recv ZSGSRD 29916
17-03-18 03:21:25.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:25.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.314 -07 000000467 INF: FPGA: Recv ZSGSRD 29918
17-03-18 03:21:25.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.324 -07 000000462 INF: FPGA: Recv ZSGSRD 29919
17-03-18 03:21:25.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.334 -07 000000424 INF: FPGA: Recv ZSGSRD 29916
17-03-18 03:21:25.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.344 -07 000000430 INF: FPGA: Recv ZSGSRD 29918
17-03-18 03:21:25.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.354 -07 000000579 INF: FPGA: Recv ZSGSRD 29914
17-03-18 03:21:25.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.364 -07 000000569 INF: FPGA: Recv ZSGSRD 29909
17-03-18 03:21:25.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.374 -07 000000590 INF: FPGA: Recv ZSGSRD 29917
17-03-18 03:21:25.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.384 -07 000000501 INF: FPGA: Recv ZSGSRD 29919
17-03-18 03:21:25.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:25.404 -07 000000512 INF: FPGA: Recv ZSGSRD 29914
17-03-18 03:21:25.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:25.414 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:25.414 -07 000000461 INF: FPGA: Recv ZPIEZORD 25380
17-03-18 03:21:25.424 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:25.424 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.416 V. Piezo Error = -9.9 V.
17-03-18 03:21:25.424 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.5 um, Read 10 ADC samples: Avg = 29916 (-131.7 uncal um), Error = 0.8 uncal um, Median = 29916 (-131.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29909 (-131.7 uncal um), Max = 29919 (-131.7 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:21:25.424 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29916, posNoise = 3, negNoise = 7
17-03-18 03:21:25.424 -07 000000610 INF: Z Motor: After move to -0.132493, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:25.424 -07 000000610 INF: Z Motor: MoveAbsStepped took 284 ms)
17-03-18 03:21:25.424 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:25.424 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:25.424 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:25.424 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:25.424 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:25.424 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:25.424 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:25.424 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:25.424 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:25.424 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:25.424 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:25.424 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:25.434 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:21:25.434 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:25.434 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:21:25.434 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:25.444 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:21:25.444 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:21:25.444 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:21:25.444 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:21:25.454 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 29119 150\n [Camera]
17-03-18 03:21:25.654 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:26.054 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:26.054 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:26.054 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:26.054 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:26.054 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:26.054 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:26.054 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:26.054 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) start.
17-03-18 03:21:26.064 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:26.064 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:21:26.244 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29119 789
17-03-18 03:21:26.394 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:26.444 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.026244,
17-03-18 03:21:26.454 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 03:21:26.454 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:21:26.454 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:26.454 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 395 ms.
17-03-18 03:21:26.454 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:21:26.454 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:26.454 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:26.454 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:21:26.464 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:26.464 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 03:21:26.564 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:26.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:26.594 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:26.594 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:26.594 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:26.594 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:26.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:26.594 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:26.704 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:26.704 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:21:26.704 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:26.704 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 576012080, 0x0, 418435064) start.
17-03-18 03:21:26.784 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:21:26.784 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:26.784 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 29119 150' command took 2 ms to send, 1322 ms to get response, and 1332 ms overall
17-03-18 03:21:26.784 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.133210
17-03-18 03:21:26.784 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13321 mm
17-03-18 03:21:26.784 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:26.784 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:21:26.784 -07 000000626 INF: Y Motor: Moving to 61.5726 mm, started at 60.7329 mm, delta = 0.8397 mm
17-03-18 03:21:26.784 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 29100, sync = True, waitForSettling = False)
17-03-18 03:21:26.784 -07 000000569 INF: Z Motor: Moving to -0.133211 mm, started at -0.132510 mm, distance = -0.70 um
17-03-18 03:21:26.784 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:26.794 -07 000000569 INF: FPGA: Xmit ZDACW 29100\n [Z Motor]
17-03-18 03:21:26.794 -07 000000462 INF: FPGA: Recv YRDPOS 124382
17-03-18 03:21:26.794 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:21:26.794 -07 000000626 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:26.794 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:21:26.794 -07 000000626 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:26.794 -07 000000626 INF: Y Motor: Moving 1343 steps-20
17-03-18 03:21:26.804 -07 000000569 INF: FPGA: 'ZDACW 29100' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:21:26.804 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:26.814 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:26.814 -07 000000430 INF: FPGA: Recv ZDACR 29100
17-03-18 03:21:26.824 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:26.824 -07 000000569 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:21:27.094 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 576012080, 0x0, 418435064) end. Duration was 392 ms.
17-03-18 03:21:27.094 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:21:27.094 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:27.104 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 03:21:27.104 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:21:27.104 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:27.104 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:27.104 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:27.104 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 512 ms.
17-03-18 03:21:27.114 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 516 ms.
17-03-18 03:21:27.174 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 03:21:27.174 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 380 ms overall
17-03-18 03:21:27.224 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:27.224 -07 000000501 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:21:27.234 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:21:27.234 -07 000000626 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:27.234 -07 000000626 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:21:27.234 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 380 ms, distance = 0.840 mm, average velocity = 2.210 mm/sec
17-03-18 03:21:28.184 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:28.184 -07 000000576 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:21:28.194 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:28.194 -07 000000626 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:28.214 -07 000000626 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:28.214 -07 000000626 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:21:28.214 -07 000000626 INF: Y Motor: Moved to 61.5640 after 1431 ms (table move)
17-03-18 03:21:28.224 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133211 mm (DAC = 29100)
17-03-18 03:21:28.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.224 -07 000000424 INF: FPGA: Recv ZSGSRD 30025
17-03-18 03:21:28.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:21:28.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.234 -07 000000462 INF: FPGA: Recv ZSGSRD 30022
17-03-18 03:21:28.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.244 -07 000000467 INF: FPGA: Recv ZSGSRD 30026
17-03-18 03:21:28.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.254 -07 000000629 INF: FPGA: Recv ZSGSRD 30034
17-03-18 03:21:28.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.264 -07 000000579 INF: FPGA: Recv ZSGSRD 30029
17-03-18 03:21:28.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.274 -07 000000502 INF: FPGA: Recv ZSGSRD 30022
17-03-18 03:21:28.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.284 -07 000000561 INF: FPGA: Recv ZSGSRD 30026
17-03-18 03:21:28.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.294 -07 000000430 INF: FPGA: Recv ZSGSRD 30024
17-03-18 03:21:28.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.304 -07 000000606 INF: FPGA: Recv ZSGSRD 30021
17-03-18 03:21:28.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.314 -07 000000576 INF: FPGA: Recv ZSGSRD 30025
17-03-18 03:21:28.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.324 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:28.324 -07 000000502 INF: FPGA: Recv ZPIEZORD 25511
17-03-18 03:21:28.334 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.334 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.440 V. Piezo Error = -9.9 V.
17-03-18 03:21:28.334 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.2 um, Read 10 ADC samples: Avg = 30025 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30025 (-132.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 30021 (-132.4 uncal um), Max = 30034 (-132.5 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:21:28.334 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30025, posNoise = 9, negNoise = 4
17-03-18 03:21:28.334 -07 000000610 INF: Z Motor: After move to -0.133211, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:28.334 -07 000000610 INF: Z Motor: Settle wait time = 1434 ms, measure time = 108 ms (allowed 150 ms), total time = 1542 ms
17-03-18 03:21:28.334 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:28.384 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-18 03:21:28.384 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:28.384 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.133210321567508. ----------
17-03-18 03:21:28.384 -07 000000610 INF: Cycle	111	Tile	3	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:28.384 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28923, sync = True, waitForSettling = True)
17-03-18 03:21:28.384 -07 000000610 INF: Z Motor: Moving to -0.132401 mm, started at -0.133210 mm, distance = 0.81 um
17-03-18 03:21:28.384 -07 000000610 INF: FPGA: Xmit ZDACW 28923\n [Z Motor]
17-03-18 03:21:28.384 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:21:28.394 -07 000000610 INF: FPGA: 'ZDACW 28923' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:21:28.394 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:28.394 -07 000000424 INF: FPGA: Recv ZDACR 28923
17-03-18 03:21:28.404 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.404 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:28.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.554 -07 000000629 INF: FPGA: Recv ZSGSRD 29900
17-03-18 03:21:28.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:28.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.564 -07 000000512 INF: FPGA: Recv ZSGSRD 29903
17-03-18 03:21:28.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.574 -07 000000461 INF: FPGA: Recv ZSGSRD 29904
17-03-18 03:21:28.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.584 -07 000000561 INF: FPGA: Recv ZSGSRD 29899
17-03-18 03:21:28.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.594 -07 000000591 INF: FPGA: Recv ZSGSRD 29891
17-03-18 03:21:28.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.604 -07 000000606 INF: FPGA: Recv ZSGSRD 29901
17-03-18 03:21:28.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.614 -07 000000618 INF: FPGA: Recv ZSGSRD 29900
17-03-18 03:21:28.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.624 -07 000000467 INF: FPGA: Recv ZSGSRD 29903
17-03-18 03:21:28.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.634 -07 000000430 INF: FPGA: Recv ZSGSRD 29901
17-03-18 03:21:28.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:28.644 -07 000000591 INF: FPGA: Recv ZSGSRD 29898
17-03-18 03:21:28.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.654 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:28.654 -07 000000455 INF: FPGA: Recv ZPIEZORD 25353
17-03-18 03:21:28.664 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:28.664 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.413 V. Piezo Error = -10.0 V.
17-03-18 03:21:28.664 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29900 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29900 (-131.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29891 (-131.6 uncal um), Max = 29904 (-131.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:21:28.664 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29900, posNoise = 4, negNoise = 9
17-03-18 03:21:28.664 -07 000000610 INF: Z Motor: After move to -0.132401, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:28.664 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:21:28.664 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:28.664 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:28.664 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:28.664 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:28.664 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:28.664 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:28.664 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:28.664 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:28.664 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:21:28.664 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:28.664 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:21:28.664 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:28.674 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:21:28.674 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:28.674 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:21:28.674 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:28.684 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:21:28.684 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:21:28.684 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:21:28.684 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:21:28.684 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 29100 150\n [Camera]
17-03-18 03:21:28.884 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:29.284 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:29.284 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:29.284 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:29.294 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:29.294 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:29.294 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:29.294 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:29.294 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:21:29.294 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:29.294 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) start.
17-03-18 03:21:29.484 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29100 789
17-03-18 03:21:29.634 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:29.684 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:21:29.684 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:21:29.684 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:29.684 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 03:21:29.684 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:21:29.684 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:29.684 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:29.684 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:21:29.684 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:29.694 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:21:29.824 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:29.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:29.824 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:29.824 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:29.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:29.824 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:29.834 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:29.834 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:21:29.834 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:29.834 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:21:30.014 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:21:30.014 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:30.014 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 29100 150' command took 2 ms to send, 1327 ms to get response, and 1332 ms overall
17-03-18 03:21:30.024 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:21:30.024 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56396484375, Z-Position -0.132407295049788. ------
17-03-18 03:21:30.024 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:21:30.024 -07 000000590 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13880 mm
17-03-18 03:21:30.024 -07 000000590 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:30.024 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:21:30.024 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 30322, sync = True, waitForSettling = False)
17-03-18 03:21:30.024 -07 000000455 INF: Z Motor: Moving to -0.138805 mm, started at -0.132407 mm, distance = -6.40 um
17-03-18 03:21:30.024 -07 000000576 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:21:30.024 -07 000000512 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 03:21:30.034 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:30.034 -07 000000455 INF: FPGA: Xmit ZDACW 30322\n [Z Motor]
17-03-18 03:21:30.034 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:21:30.044 -07 000000455 INF: FPGA: 'ZDACW 30322' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:21:30.044 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:30.044 -07 000000430 INF: FPGA: Recv ZDACR 30322
17-03-18 03:21:30.054 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:30.054 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:30.054 -07 000000455 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 03:21:30.054 -07 000000444 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:21:30.064 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:21:30.064 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 32 ms overall
17-03-18 03:21:30.064 -07 000000512 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:30.064 -07 000000512 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:30.064 -07 000000512 INF: Y Motor: Moving 1342 steps-18
17-03-18 03:21:30.074 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:30.204 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:21:30.204 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:21:30.204 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:30.204 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:21:30.204 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:21:30.204 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:30.214 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:30.214 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:30.214 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:21:30.224 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:21:30.264 -07 000000579 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:21:30.264 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 232 ms overall
17-03-18 03:21:30.444 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:21:30.444 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:21:30.504 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:30.504 -07 000000629 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:21:30.514 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:30.514 -07 000000512 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:30.514 -07 000000512 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:21:30.514 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.839 mm, average velocity = 2.161 mm/sec
17-03-18 03:21:31.464 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:31.464 -07 000000606 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:21:31.474 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:31.474 -07 000000512 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:31.504 -07 000000512 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:31.504 -07 000000512 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:21:31.504 -07 000000512 INF: Y Motor: Moved to 62.3955 after 1474 ms (table move)
17-03-18 03:21:31.504 -07 000000590 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138805 mm (DAC = 30322)
17-03-18 03:21:31.504 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:31.504 -07 000000430 INF: FPGA: Recv ZSGSRD 30901
17-03-18 03:21:31.514 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:21:31.514 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:31.514 -07 000000626 INF: FPGA: Recv ZSGSRD 30899
17-03-18 03:21:31.524 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:31.524 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:31.524 -07 000000467 INF: FPGA: Recv ZSGSRD 30900
17-03-18 03:21:31.534 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:31.534 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:31.534 -07 000000444 INF: FPGA: Recv ZSGSRD 30886
17-03-18 03:21:31.544 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:31.544 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:31.544 -07 000000606 INF: FPGA: Recv ZSGSRD 30898
17-03-18 03:21:31.554 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:31.554 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:31.554 -07 000000461 INF: FPGA: Recv ZSGSRD 30891
17-03-18 03:21:31.564 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:31.564 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:31.564 -07 000000626 INF: FPGA: Recv ZSGSRD 30892
17-03-18 03:21:31.564 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:31.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:31.574 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:31.574 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:31.574 -07 000000618 INF: FPGA: Recv ZSGSRD 30904
17-03-18 03:21:31.584 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:31.584 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:31.584 -07 000000502 INF: FPGA: Recv ZSGSRD 30894
17-03-18 03:21:31.594 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:31.594 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:31.594 -07 000000561 INF: FPGA: Recv ZSGSRD 30900
17-03-18 03:21:31.604 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:31.604 -07 000000590 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:31.604 -07 000000569 INF: FPGA: Recv ZPIEZORD 26671
17-03-18 03:21:31.614 -07 000000590 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:31.614 -07 000000590 INF: Z Motor: Piezo is near 37.0 V (nominally 0 to 100 V), expect near 46.3 V, since DAC is at 4.627 V. Piezo Error = -9.3 V.
17-03-18 03:21:31.614 -07 000000590 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.8 um, Read 10 ADC samples: Avg = 30896 (-138.0 uncal um), Error = 0.8 uncal um, Median = 30898 (-138.0 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 30886 (-137.9 uncal um), Max = 30904 (-138.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:21:31.614 -07 000000590 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30896, posNoise = 8, negNoise = 10
17-03-18 03:21:31.614 -07 000000590 INF: Z Motor: After move to -0.138805, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:31.614 -07 000000590 INF: Z Motor: Settle wait time = 1477 ms, measure time = 106 ms (allowed 150 ms), total time = 1583 ms
17-03-18 03:21:31.614 -07 000000590 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:31.664 -07 000000590 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1635 ms
17-03-18 03:21:31.664 -07 000000590 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:31.664 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:31.664 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:31.664 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:31.664 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:31.664 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:21:31.664 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:31.664 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:21:31.664 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:21:31.664 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:21:31.674 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:21:31.674 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-18 03:21:31.674 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-18 03:21:31.684 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:21:31.724 -07 000000629 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:21:31.804 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.039839,
17-03-18 03:21:32.024 -07 000000591 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:21:32.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:21:32.024 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:21:32.024 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2352550048, 0x0, 559484976) start.
17-03-18 03:21:32.064 -07 000000461 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:21:32.064 -07 000000579 INF: FPGA: Recv CAMSNAP
17-03-18 03:21:32.064 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 384 ms overall
17-03-18 03:21:32.154 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2352550048, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:21:32.154 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:32.154 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:21:32.154 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-18 03:21:32.264 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:21:32.264 -07 000000561 INF: Autofocus start
17-03-18 03:21:32.264 -07 000000561 INF: MeasureProfile start
17-03-18 03:21:32.264 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:21:32.274 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:32.274 -07 000000501 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:21:32.274 -07 000000561 INF: MeasureProfile done
17-03-18 03:21:32.274 -07 000000561 INF: X=-16  Z correction [um]=-0.08128808
17-03-18 03:21:32.274 -07 000000561 INF: Autofocus finished
17-03-18 03:21:32.474 -07 000000461 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:21:32.474 -07 000000501 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:21:32.474 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.138805810342982. ----------
17-03-18 03:21:32.474 -07 000000610 INF: Cycle	111	Tile	4	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:32.474 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28816, sync = True, waitForSettling = True)
17-03-18 03:21:32.484 -07 000000610 INF: Z Motor: Moving to -0.131911 mm, started at -0.138806 mm, distance = 6.89 um
17-03-18 03:21:32.484 -07 000000610 INF: FPGA: Xmit ZDACW 28816\n [Z Motor]
17-03-18 03:21:32.484 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:21:32.494 -07 000000610 INF: FPGA: 'ZDACW 28816' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:32.494 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:32.494 -07 000000576 INF: FPGA: Recv ZDACR 28816
17-03-18 03:21:32.504 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:32.504 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:32.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:32.654 -07 000000626 INF: FPGA: Recv ZSGSRD 29827
17-03-18 03:21:32.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:32.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:32.664 -07 000000430 INF: FPGA: Recv ZSGSRD 29824
17-03-18 03:21:32.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:32.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:32.674 -07 000000579 INF: FPGA: Recv ZSGSRD 29826
17-03-18 03:21:32.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:32.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:32.684 -07 000000591 INF: FPGA: Recv ZSGSRD 29825
17-03-18 03:21:32.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:32.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:32.694 -07 000000502 INF: FPGA: Recv ZSGSRD 29824
17-03-18 03:21:32.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:32.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:32.704 -07 000000590 INF: FPGA: Recv ZSGSRD 29824
17-03-18 03:21:32.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:32.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:32.714 -07 000000561 INF: FPGA: Recv ZSGSRD 29821
17-03-18 03:21:32.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:32.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:32.724 -07 000000424 INF: FPGA: Recv ZSGSRD 29823
17-03-18 03:21:32.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:32.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:32.734 -07 000000606 INF: FPGA: Recv ZSGSRD 29820
17-03-18 03:21:32.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:32.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:32.744 -07 000000576 INF: FPGA: Recv ZSGSRD 29824
17-03-18 03:21:32.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:32.754 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:32.754 -07 000000461 INF: FPGA: Recv ZPIEZORD 25282
17-03-18 03:21:32.764 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:32.764 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.397 V. Piezo Error = -10.0 V.
17-03-18 03:21:32.764 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29824 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29824 (-131.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29820 (-131.1 uncal um), Max = 29827 (-131.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:21:32.764 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29824, posNoise = 3, negNoise = 4
17-03-18 03:21:32.764 -07 000000610 INF: Z Motor: After move to -0.131911, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:32.764 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 03:21:32.764 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:32.764 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:32.764 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:32.764 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:32.764 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:32.764 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:32.764 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:32.764 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:32.764 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:21:32.764 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:32.764 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:21:32.764 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:32.764 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:21:32.764 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:32.774 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:21:32.774 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:32.784 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:21:32.784 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:21:32.784 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:21:32.784 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:21:32.784 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28993 150\n [Camera]
17-03-18 03:21:32.984 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:33.384 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:33.384 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:33.384 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:33.384 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:33.384 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:21:33.394 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:33.394 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:33.394 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:33.394 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:33.394 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:21:33.584 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28993 789
17-03-18 03:21:33.724 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:33.764 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:21:33.764 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:21:33.764 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:33.764 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:21:33.764 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:21:33.764 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:33.764 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:33.774 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:21:33.774 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:21:33.774 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:21:33.924 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:33.924 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:33.924 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:33.924 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:33.924 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:33.924 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:33.924 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:33.924 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:21:33.934 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:33.934 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:21:34.114 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:21:34.114 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:34.114 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28993 150' command took 2 ms to send, 1326 ms to get response, and 1333 ms overall
17-03-18 03:21:34.114 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.132564
17-03-18 03:21:34.114 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13256 mm
17-03-18 03:21:34.114 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:34.124 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:21:34.124 -07 000000569 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 03:21:34.124 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:34.124 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 28959, sync = True, waitForSettling = False)
17-03-18 03:21:34.124 -07 000000576 INF: Z Motor: Moving to -0.132566 mm, started at -0.131919 mm, distance = -0.65 um
17-03-18 03:21:34.124 -07 000000626 INF: FPGA: Recv YRDPOS 127787
17-03-18 03:21:34.134 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:34.134 -07 000000569 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:34.134 -07 000000576 INF: FPGA: Xmit ZDACW 28959\n [Z Motor]
17-03-18 03:21:34.134 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:21:34.134 -07 000000569 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:34.134 -07 000000569 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:21:34.144 -07 000000576 INF: FPGA: 'ZDACW 28959' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:21:34.144 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:34.154 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:34.154 -07 000000502 INF: FPGA: Recv ZDACR 28959
17-03-18 03:21:34.164 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:34.164 -07 000000576 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-18 03:21:34.304 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:21:34.304 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:21:34.304 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:34.304 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:34.424 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 494 ms.
17-03-18 03:21:34.424 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 495 ms.
17-03-18 03:21:34.424 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:34.434 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:34.434 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 502 ms.
17-03-18 03:21:34.434 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 504 ms.
17-03-18 03:21:34.514 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:21:34.524 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 386 ms overall
17-03-18 03:21:34.594 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:34.594 -07 000000590 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:21:34.604 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:34.604 -07 000000569 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:34.604 -07 000000569 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 03:21:34.604 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.837 mm, average velocity = 2.169 mm/sec
17-03-18 03:21:35.554 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:35.554 -07 000000512 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:21:35.564 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:35.564 -07 000000569 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:35.584 -07 000000569 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:35.584 -07 000000569 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:21:35.584 -07 000000569 INF: Y Motor: Moved to 63.2241 after 1468 ms (table move)
17-03-18 03:21:35.594 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132566 mm (DAC = 28959)
17-03-18 03:21:35.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.594 -07 000000626 INF: FPGA: Recv ZSGSRD 29925
17-03-18 03:21:35.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:21:35.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.604 -07 000000591 INF: FPGA: Recv ZSGSRD 29931
17-03-18 03:21:35.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.614 -07 000000455 INF: FPGA: Recv ZSGSRD 29928
17-03-18 03:21:35.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.624 -07 000000579 INF: FPGA: Recv ZSGSRD 29928
17-03-18 03:21:35.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.634 -07 000000590 INF: FPGA: Recv ZSGSRD 29918
17-03-18 03:21:35.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.644 -07 000000444 INF: FPGA: Recv ZSGSRD 29928
17-03-18 03:21:35.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.654 -07 000000590 INF: FPGA: Recv ZSGSRD 29929
17-03-18 03:21:35.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.664 -07 000000606 INF: FPGA: Recv ZSGSRD 29924
17-03-18 03:21:35.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.674 -07 000000462 INF: FPGA: Recv ZSGSRD 29933
17-03-18 03:21:35.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.684 -07 000000467 INF: FPGA: Recv ZSGSRD 29925
17-03-18 03:21:35.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.694 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:35.694 -07 000000626 INF: FPGA: Recv ZPIEZORD 25449
17-03-18 03:21:35.704 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.704 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.419 V. Piezo Error = -9.8 V.
17-03-18 03:21:35.704 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.6 um, Read 10 ADC samples: Avg = 29927 (-131.8 uncal um), Error = 0.8 uncal um, Median = 29928 (-131.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29918 (-131.7 uncal um), Max = 29933 (-131.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:21:35.704 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29927, posNoise = 6, negNoise = 9
17-03-18 03:21:35.704 -07 000000610 INF: Z Motor: After move to -0.132566, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:35.704 -07 000000610 INF: Z Motor: Settle wait time = 1469 ms, measure time = 109 ms (allowed 150 ms), total time = 1578 ms
17-03-18 03:21:35.704 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:35.754 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1631 ms
17-03-18 03:21:35.754 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:35.754 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.132580748777615. ----------
17-03-18 03:21:35.754 -07 000000610 INF: Cycle	111	Tile	5	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:35.754 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28782, sync = True, waitForSettling = True)
17-03-18 03:21:35.754 -07 000000610 INF: Z Motor: Moving to -0.131756 mm, started at -0.132581 mm, distance = 0.83 um
17-03-18 03:21:35.754 -07 000000610 INF: FPGA: Xmit ZDACW 28782\n [Z Motor]
17-03-18 03:21:35.754 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:21:35.764 -07 000000610 INF: FPGA: 'ZDACW 28782' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:21:35.764 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:35.764 -07 000000626 INF: FPGA: Recv ZDACR 28782
17-03-18 03:21:35.774 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.774 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:35.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.924 -07 000000561 INF: FPGA: Recv ZSGSRD 29810
17-03-18 03:21:35.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.934 -07 000000461 INF: FPGA: Recv ZSGSRD 29801
17-03-18 03:21:35.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.944 -07 000000455 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:21:35.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.954 -07 000000444 INF: FPGA: Recv ZSGSRD 29797
17-03-18 03:21:35.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.964 -07 000000467 INF: FPGA: Recv ZSGSRD 29797
17-03-18 03:21:35.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.974 -07 000000462 INF: FPGA: Recv ZSGSRD 29803
17-03-18 03:21:35.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.984 -07 000000461 INF: FPGA: Recv ZSGSRD 29797
17-03-18 03:21:35.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:35.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:35.994 -07 000000626 INF: FPGA: Recv ZSGSRD 29802
17-03-18 03:21:36.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:36.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:36.004 -07 000000444 INF: FPGA: Recv ZSGSRD 29799
17-03-18 03:21:36.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:36.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:36.014 -07 000000430 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:21:36.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:36.024 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:36.024 -07 000000462 INF: FPGA: Recv ZPIEZORD 25301
17-03-18 03:21:36.034 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:36.034 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.392 V. Piezo Error = -9.9 V.
17-03-18 03:21:36.034 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29800 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29798 (-131.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29796 (-131.0 uncal um), Max = 29810 (-131.0 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:21:36.034 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29800, posNoise = 10, negNoise = 4
17-03-18 03:21:36.034 -07 000000610 INF: Z Motor: After move to -0.131756, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:36.034 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:21:36.034 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:36.034 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:36.034 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:36.034 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:36.034 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:36.034 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:36.034 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:36.034 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:36.034 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:21:36.034 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:36.034 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:21:36.034 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:36.034 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:21:36.034 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:36.044 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:21:36.044 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:36.044 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:21:36.044 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:21:36.044 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:21:36.054 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:21:36.054 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28959 150\n [Camera]
17-03-18 03:21:36.254 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:36.564 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:36.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:36.654 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:36.654 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:36.654 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:36.654 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:36.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:36.664 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:36.664 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:36.664 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) start.
17-03-18 03:21:36.664 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:36.664 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:21:36.854 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28959 789
17-03-18 03:21:36.994 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:37.044 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:21:37.044 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:21:37.044 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:37.044 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:21:37.044 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:21:37.044 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:37.044 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:37.044 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:37.044 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:21:37.054 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:21:37.164 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.003063,
17-03-18 03:21:37.194 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:37.194 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:37.194 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:37.194 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:37.194 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:37.194 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:37.194 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:37.194 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:21:37.204 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:37.204 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:21:37.384 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:21:37.384 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:37.384 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28959 150' command took 2 ms to send, 1324 ms to get response, and 1332 ms overall
17-03-18 03:21:37.384 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.132183
17-03-18 03:21:37.384 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13218 mm
17-03-18 03:21:37.384 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:37.384 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:21:37.384 -07 000000569 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 03:21:37.384 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:37.384 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 28875, sync = True, waitForSettling = False)
17-03-18 03:21:37.384 -07 000000591 INF: Z Motor: Moving to -0.132181 mm, started at -0.131765 mm, distance = -0.42 um
17-03-18 03:21:37.394 -07 000000591 INF: FPGA: Xmit ZDACW 28875\n [Z Motor]
17-03-18 03:21:37.394 -07 000000606 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:21:37.394 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:21:37.394 -07 000000569 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:37.394 -07 000000569 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:37.394 -07 000000569 INF: Y Motor: Moving 1342 steps-17
17-03-18 03:21:37.394 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:21:37.404 -07 000000591 INF: FPGA: 'ZDACW 28875' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:37.404 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:37.404 -07 000000501 INF: FPGA: Recv ZDACR 28875
17-03-18 03:21:37.414 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:37.414 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:37.414 -07 000000591 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 03:21:37.574 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 03:21:37.574 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:21:37.574 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:37.574 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:21:37.694 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 489 ms.
17-03-18 03:21:37.694 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:37.694 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 118 ms.
17-03-18 03:21:37.694 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 499 ms.
17-03-18 03:21:37.694 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:37.704 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 505 ms.
17-03-18 03:21:37.784 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:21:37.784 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-18 03:21:37.834 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:37.834 -07 000000424 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:21:37.844 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:21:37.844 -07 000000569 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:37.844 -07 000000569 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-18 03:21:37.844 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.838 mm, average velocity = 2.117 mm/sec
17-03-18 03:21:38.794 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:38.794 -07 000000590 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:21:38.804 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:38.804 -07 000000569 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:38.824 -07 000000569 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:38.824 -07 000000569 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:21:38.824 -07 000000569 INF: Y Motor: Moved to 64.0571 after 1435 ms (table move)
17-03-18 03:21:38.824 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132181 mm (DAC = 28875)
17-03-18 03:21:38.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:38.834 -07 000000591 INF: FPGA: Recv ZSGSRD 29871
17-03-18 03:21:38.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:21:38.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:38.834 -07 000000579 INF: FPGA: Recv ZSGSRD 29865
17-03-18 03:21:38.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:38.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:38.844 -07 000000467 INF: FPGA: Recv ZSGSRD 29862
17-03-18 03:21:38.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:38.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:38.854 -07 000000424 INF: FPGA: Recv ZSGSRD 29859
17-03-18 03:21:38.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:38.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:38.864 -07 000000455 INF: FPGA: Recv ZSGSRD 29868
17-03-18 03:21:38.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:38.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:38.874 -07 000000430 INF: FPGA: Recv ZSGSRD 29872
17-03-18 03:21:38.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:38.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:38.884 -07 000000576 INF: FPGA: Recv ZSGSRD 29865
17-03-18 03:21:38.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:38.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:38.894 -07 000000618 INF: FPGA: Recv ZSGSRD 29862
17-03-18 03:21:38.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:38.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:38.904 -07 000000561 INF: FPGA: Recv ZSGSRD 29862
17-03-18 03:21:38.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:38.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:38.914 -07 000000606 INF: FPGA: Recv ZSGSRD 29872
17-03-18 03:21:38.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:38.924 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:38.924 -07 000000512 INF: FPGA: Recv ZPIEZORD 25395
17-03-18 03:21:38.934 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:38.934 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.406 V. Piezo Error = -9.8 V.
17-03-18 03:21:38.934 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29866 (-131.4 uncal um), Error = 0.8 uncal um, Median = 29865 (-131.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29859 (-131.4 uncal um), Max = 29872 (-131.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:21:38.934 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29866, posNoise = 6, negNoise = 7
17-03-18 03:21:38.934 -07 000000610 INF: Z Motor: After move to -0.132181, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:38.934 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 104 ms (allowed 150 ms), total time = 1541 ms
17-03-18 03:21:38.934 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:38.984 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-18 03:21:38.984 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:38.984 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.132188871836968. ----------
17-03-18 03:21:38.984 -07 000000610 INF: Cycle	111	Tile	6	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:38.984 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28699, sync = True, waitForSettling = True)
17-03-18 03:21:38.984 -07 000000610 INF: Z Motor: Moving to -0.131376 mm, started at -0.132189 mm, distance = 0.81 um
17-03-18 03:21:38.984 -07 000000610 INF: FPGA: Xmit ZDACW 28699\n [Z Motor]
17-03-18 03:21:38.984 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:21:38.994 -07 000000610 INF: FPGA: 'ZDACW 28699' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:38.994 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:38.994 -07 000000430 INF: FPGA: Recv ZDACR 28699
17-03-18 03:21:39.004 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:39.004 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:39.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:39.154 -07 000000591 INF: FPGA: Recv ZSGSRD 29741
17-03-18 03:21:39.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:39.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:39.164 -07 000000502 INF: FPGA: Recv ZSGSRD 29742
17-03-18 03:21:39.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:39.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:39.174 -07 000000561 INF: FPGA: Recv ZSGSRD 29738
17-03-18 03:21:39.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:39.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:39.184 -07 000000579 INF: FPGA: Recv ZSGSRD 29738
17-03-18 03:21:39.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:39.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:39.194 -07 000000462 INF: FPGA: Recv ZSGSRD 29739
17-03-18 03:21:39.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:39.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:39.204 -07 000000590 INF: FPGA: Recv ZSGSRD 29738
17-03-18 03:21:39.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:39.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:39.214 -07 000000444 INF: FPGA: Recv ZSGSRD 29736
17-03-18 03:21:39.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:39.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:39.224 -07 000000430 INF: FPGA: Recv ZSGSRD 29745
17-03-18 03:21:39.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:39.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:39.234 -07 000000501 INF: FPGA: Recv ZSGSRD 29742
17-03-18 03:21:39.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:39.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:39.244 -07 000000455 INF: FPGA: Recv ZSGSRD 29739
17-03-18 03:21:39.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:39.254 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:39.254 -07 000000467 INF: FPGA: Recv ZPIEZORD 25222
17-03-18 03:21:39.264 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:39.264 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.379 V. Piezo Error = -9.9 V.
17-03-18 03:21:39.264 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29740 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29739 (-130.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29736 (-130.6 uncal um), Max = 29745 (-130.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:21:39.264 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29740, posNoise = 5, negNoise = 4
17-03-18 03:21:39.264 -07 000000610 INF: Z Motor: After move to -0.131376, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:39.264 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:21:39.264 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:39.264 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:39.264 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:39.264 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:39.264 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:39.264 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:39.264 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:39.264 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:39.264 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:39.264 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:39.264 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:39.264 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:39.264 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:21:39.264 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:39.274 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:21:39.274 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:39.284 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:21:39.284 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:21:39.284 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:21:39.284 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:21:39.294 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28875 150\n [Camera]
17-03-18 03:21:39.494 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:39.894 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:39.894 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:39.894 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:39.894 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:39.894 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:39.894 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:39.904 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:39.904 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) start.
17-03-18 03:21:39.904 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:39.904 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:21:40.084 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28875 789
17-03-18 03:21:40.234 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:40.274 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 576012080, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:21:40.274 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:21:40.274 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:40.274 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:21:40.274 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:21:40.274 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:40.274 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:40.274 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:21:40.274 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:40.284 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:21:40.434 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:40.434 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:40.434 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:40.434 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:40.434 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:40.434 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:40.434 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:40.434 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:21:40.444 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:40.444 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:21:40.624 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:21:40.624 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:40.624 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28875 150' command took 2 ms to send, 1325 ms to get response, and 1335 ms overall
17-03-18 03:21:40.624 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.131985
17-03-18 03:21:40.624 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13199 mm
17-03-18 03:21:40.624 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:40.634 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:21:40.634 -07 000000590 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 03:21:40.634 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:40.634 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 28832, sync = True, waitForSettling = False)
17-03-18 03:21:40.634 -07 000000626 INF: Z Motor: Moving to -0.131984 mm, started at -0.131379 mm, distance = -0.61 um
17-03-18 03:21:40.634 -07 000000461 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:21:40.644 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:40.644 -07 000000590 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:40.644 -07 000000590 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:40.644 -07 000000590 INF: Y Motor: Moving 1337 steps-11
17-03-18 03:21:40.644 -07 000000626 INF: FPGA: Xmit ZDACW 28832\n [Z Motor]
17-03-18 03:21:40.644 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:21:40.654 -07 000000626 INF: FPGA: 'ZDACW 28832' command took 1 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:21:40.654 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:40.664 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:40.664 -07 000000591 INF: FPGA: Recv ZDACR 28832
17-03-18 03:21:40.674 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:40.674 -07 000000626 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:21:40.814 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:21:40.814 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:21:40.814 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:40.814 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:21:40.814 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:21:40.814 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:40.814 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:40.814 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:21:40.814 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:40.824 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:21:41.024 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:21:41.024 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:21:41.074 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:41.074 -07 000000561 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:21:41.084 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:41.084 -07 000000590 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:41.084 -07 000000590 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:21:41.084 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.835 mm, average velocity = 2.159 mm/sec
17-03-18 03:21:41.564 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:41.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:42.034 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:42.034 -07 000000561 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:21:42.044 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:42.044 -07 000000590 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:42.064 -07 000000590 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:42.064 -07 000000590 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:21:42.064 -07 000000590 INF: Y Motor: Moved to 64.8789 after 1436 ms (table move)
17-03-18 03:21:42.074 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131984 mm (DAC = 28832)
17-03-18 03:21:42.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.074 -07 000000618 INF: FPGA: Recv ZSGSRD 29826
17-03-18 03:21:42.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:42.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.084 -07 000000606 INF: FPGA: Recv ZSGSRD 29828
17-03-18 03:21:42.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.094 -07 000000467 INF: FPGA: Recv ZSGSRD 29845
17-03-18 03:21:42.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.104 -07 000000626 INF: FPGA: Recv ZSGSRD 29849
17-03-18 03:21:42.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.114 -07 000000512 INF: FPGA: Recv ZSGSRD 29836
17-03-18 03:21:42.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.124 -07 000000569 INF: FPGA: Recv ZSGSRD 29833
17-03-18 03:21:42.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.134 -07 000000590 INF: FPGA: Recv ZSGSRD 29830
17-03-18 03:21:42.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.144 -07 000000579 INF: FPGA: Recv ZSGSRD 29831
17-03-18 03:21:42.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.154 -07 000000444 INF: FPGA: Recv ZSGSRD 29831
17-03-18 03:21:42.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.164 -07 000000424 INF: FPGA: Recv ZSGSRD 29837
17-03-18 03:21:42.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.174 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:42.174 -07 000000591 INF: FPGA: Recv ZPIEZORD 25391
17-03-18 03:21:42.184 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.184 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.399 V. Piezo Error = -9.8 V.
17-03-18 03:21:42.184 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.0 um, Read 10 ADC samples: Avg = 29835 (-131.2 uncal um), Error = 0.8 uncal um, Median = 29832 (-131.2 uncal um), StdDev = 7 (0.0 uncal um), Range = 23 (0.1 uncal um), Min = 29826 (-131.1 uncal um), Max = 29849 (-131.3 uncal um), Pos Noise = 14 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:21:42.184 -07 000000610 INF: Z Motor: ADC noise = 14, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29835, posNoise = 14, negNoise = 9
17-03-18 03:21:42.184 -07 000000610 INF: Z Motor: After move to -0.131984, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:42.184 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 109 ms (allowed 150 ms), total time = 1546 ms
17-03-18 03:21:42.184 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:42.234 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-18 03:21:42.234 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:42.234 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.131989721260573. ----------
17-03-18 03:21:42.234 -07 000000610 INF: Cycle	111	Tile	7	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:42.234 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28655, sync = True, waitForSettling = True)
17-03-18 03:21:42.234 -07 000000610 INF: Z Motor: Moving to -0.131174 mm, started at -0.131990 mm, distance = 0.82 um
17-03-18 03:21:42.234 -07 000000610 INF: FPGA: Xmit ZDACW 28655\n [Z Motor]
17-03-18 03:21:42.234 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:21:42.244 -07 000000610 INF: FPGA: 'ZDACW 28655' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:42.244 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:42.244 -07 000000629 INF: FPGA: Recv ZDACR 28655
17-03-18 03:21:42.254 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.254 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:42.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.404 -07 000000579 INF: FPGA: Recv ZSGSRD 29711
17-03-18 03:21:42.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:42.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.414 -07 000000606 INF: FPGA: Recv ZSGSRD 29711
17-03-18 03:21:42.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.424 -07 000000501 INF: FPGA: Recv ZSGSRD 29718
17-03-18 03:21:42.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.434 -07 000000444 INF: FPGA: Recv ZSGSRD 29715
17-03-18 03:21:42.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.444 -07 000000462 INF: FPGA: Recv ZSGSRD 29704
17-03-18 03:21:42.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.454 -07 000000579 INF: FPGA: Recv ZSGSRD 29705
17-03-18 03:21:42.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.464 -07 000000561 INF: FPGA: Recv ZSGSRD 29707
17-03-18 03:21:42.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.474 -07 000000591 INF: FPGA: Recv ZSGSRD 29715
17-03-18 03:21:42.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.484 -07 000000461 INF: FPGA: Recv ZSGSRD 29711
17-03-18 03:21:42.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:42.494 -07 000000629 INF: FPGA: Recv ZSGSRD 29710
17-03-18 03:21:42.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.504 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:42.504 -07 000000618 INF: FPGA: Recv ZPIEZORD 25209
17-03-18 03:21:42.514 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:42.514 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.372 V. Piezo Error = -9.9 V.
17-03-18 03:21:42.514 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.2 um, Read 10 ADC samples: Avg = 29711 (-130.4 uncal um), Error = 0.8 uncal um, Median = 29711 (-130.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29704 (-130.4 uncal um), Max = 29718 (-130.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:21:42.514 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29711, posNoise = 7, negNoise = 7
17-03-18 03:21:42.514 -07 000000610 INF: Z Motor: After move to -0.131174, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:42.514 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 03:21:42.514 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:42.514 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:42.514 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:42.514 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:42.514 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:42.514 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:42.514 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:42.514 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:42.514 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:42.514 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:42.514 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:21:42.514 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:42.524 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:21:42.524 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:42.524 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.999021,
17-03-18 03:21:42.524 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:21:42.524 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:42.534 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 17 ms.
17-03-18 03:21:42.534 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:21:42.534 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:21:42.534 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:21:42.564 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28832 150\n [Camera]
17-03-18 03:21:42.764 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:43.164 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:43.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:43.164 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:43.164 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:43.164 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:43.164 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:43.164 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:43.164 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:21:43.164 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:43.164 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:21:43.354 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28832 789
17-03-18 03:21:43.504 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:43.544 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:21:43.544 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:21:43.544 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:43.544 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:21:43.544 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:43.544 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:21:43.544 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:21:43.544 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:43.544 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:43.554 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:21:43.704 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:43.704 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:43.704 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:43.704 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:43.704 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:21:43.704 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:43.704 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:43.704 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:43.704 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:43.704 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:21:43.894 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:21:43.894 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:43.894 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28832 150' command took 2 ms to send, 1323 ms to get response, and 1352 ms overall
17-03-18 03:21:43.894 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:21:43.894 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87890625, Z-Position -0.131193118954995. ------
17-03-18 03:21:43.894 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:21:43.904 -07 000000590 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13781 mm
17-03-18 03:21:43.904 -07 000000590 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:43.904 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:21:43.904 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:21:43.904 -07 000000502 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-18 03:21:43.904 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 30105, sync = True, waitForSettling = False)
17-03-18 03:21:43.904 -07 000000591 INF: Z Motor: Moving to -0.137812 mm, started at -0.131193 mm, distance = -6.62 um
17-03-18 03:21:43.914 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:43.914 -07 000000591 INF: FPGA: Xmit ZDACW 30105\n [Z Motor]
17-03-18 03:21:43.914 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:21:43.924 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:43.924 -07 000000591 INF: FPGA: 'ZDACW 30105' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:21:43.924 -07 000000444 INF: FPGA: Recv YRDPOS 132873
17-03-18 03:21:43.934 -07 000000561 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:21:43.934 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:21:43.934 -07 000000502 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:43.934 -07 000000502 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:43.934 -07 000000502 INF: Y Motor: Moving 1349 steps-28
17-03-18 03:21:43.944 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:43.944 -07 000000462 INF: FPGA: Recv ZDACR 30105
17-03-18 03:21:43.954 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:43.954 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:21:43.954 -07 000000591 INF: Z Motor: MoveAbsStepped took 46 ms (did NOT wait for settling yet))
17-03-18 03:21:44.084 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:21:44.084 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:21:44.084 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:44.084 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:21:44.084 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:21:44.084 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:44.084 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:44.084 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:21:44.084 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:44.094 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:21:44.134 -07 000000569 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:21:44.134 -07 000000561 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:21:44.324 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:21:44.324 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 392 ms overall
17-03-18 03:21:44.374 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:44.384 -07 000000501 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:21:44.384 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:21:44.384 -07 000000502 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:44.384 -07 000000502 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:21:44.384 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 392 ms, distance = 0.844 mm, average velocity = 2.152 mm/sec
17-03-18 03:21:45.334 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:45.334 -07 000000462 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:21:45.344 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:45.344 -07 000000502 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:45.374 -07 000000502 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:45.374 -07 000000502 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:21:45.374 -07 000000502 INF: Y Motor: Moved to 65.7144 after 1469 ms (table move)
17-03-18 03:21:45.374 -07 000000590 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137812 mm (DAC = 30105)
17-03-18 03:21:45.374 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:45.374 -07 000000629 INF: FPGA: Recv ZSGSRD 30748
17-03-18 03:21:45.384 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:45.384 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:45.384 -07 000000424 INF: FPGA: Recv ZSGSRD 30745
17-03-18 03:21:45.394 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:45.394 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:45.394 -07 000000569 INF: FPGA: Recv ZSGSRD 30748
17-03-18 03:21:45.404 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:45.404 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:45.404 -07 000000430 INF: FPGA: Recv ZSGSRD 30744
17-03-18 03:21:45.414 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:45.414 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:45.414 -07 000000455 INF: FPGA: Recv ZSGSRD 30742
17-03-18 03:21:45.424 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:45.424 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:45.424 -07 000000461 INF: FPGA: Recv ZSGSRD 30739
17-03-18 03:21:45.434 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:45.434 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:45.434 -07 000000512 INF: FPGA: Recv ZSGSRD 30738
17-03-18 03:21:45.444 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:45.444 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:45.444 -07 000000576 INF: FPGA: Recv ZSGSRD 30744
17-03-18 03:21:45.454 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:45.454 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:45.454 -07 000000430 INF: FPGA: Recv ZSGSRD 30740
17-03-18 03:21:45.464 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:45.464 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:45.464 -07 000000455 INF: FPGA: Recv ZSGSRD 30739
17-03-18 03:21:45.474 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:45.474 -07 000000590 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:45.474 -07 000000579 INF: FPGA: Recv ZPIEZORD 26508
17-03-18 03:21:45.484 -07 000000590 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:45.484 -07 000000590 INF: Z Motor: Piezo is near 36.6 V (nominally 0 to 100 V), expect near 45.9 V, since DAC is at 4.594 V. Piezo Error = -9.3 V.
17-03-18 03:21:45.484 -07 000000590 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.8 um, Read 10 ADC samples: Avg = 30743 (-137.0 uncal um), Error = 0.8 uncal um, Median = 30743 (-137.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30738 (-137.0 uncal um), Max = 30748 (-137.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:21:45.484 -07 000000590 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30743, posNoise = 5, negNoise = 5
17-03-18 03:21:45.484 -07 000000590 INF: Z Motor: After move to -0.137812, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:45.484 -07 000000590 INF: Z Motor: Settle wait time = 1472 ms, measure time = 105 ms (allowed 150 ms), total time = 1577 ms
17-03-18 03:21:45.484 -07 000000590 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:45.534 -07 000000590 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1630 ms
17-03-18 03:21:45.534 -07 000000590 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:45.534 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:45.534 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:45.534 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:45.534 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:45.534 -07 000000467 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:21:45.534 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:45.534 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:45.544 -07 000000467 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:21:45.544 -07 000000467 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:21:45.544 -07 000000467 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:21:45.554 -07 000000467 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 03:21:45.554 -07 000000467 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms.
17-03-18 03:21:45.554 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:21:45.594 -07 000000579 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:21:45.894 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:21:45.894 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:21:45.904 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:21:45.904 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611434344, 0x0, 559484976) start.
17-03-18 03:21:45.934 -07 000000462 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:21:45.934 -07 000000502 INF: FPGA: Recv CAMSNAP
17-03-18 03:21:45.934 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 379 ms to get response, and 385 ms overall
17-03-18 03:21:46.024 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611434344, 0x0, 559484976) end. Duration was 119 ms.
17-03-18 03:21:46.024 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:46.024 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:21:46.024 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 122 ms.
17-03-18 03:21:46.034 -07 000000561 INF: Autofocus start
17-03-18 03:21:46.034 -07 000000561 INF: MeasureProfile start
17-03-18 03:21:46.034 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:21:46.034 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:21:46.044 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:46.044 -07 000000455 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:21:46.044 -07 000000561 INF: MeasureProfile done
17-03-18 03:21:46.044 -07 000000561 INF: X=20  Z correction [um]=0.07225946
17-03-18 03:21:46.044 -07 000000561 INF: Autofocus finished
17-03-18 03:21:46.244 -07 000000430 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:21:46.244 -07 000000455 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:21:46.244 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.137822905885292. ----------
17-03-18 03:21:46.244 -07 000000610 INF: Cycle	111	Tile	8	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:46.254 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28633, sync = True, waitForSettling = True)
17-03-18 03:21:46.254 -07 000000610 INF: Z Motor: Moving to -0.131073 mm, started at -0.137823 mm, distance = 6.75 um
17-03-18 03:21:46.254 -07 000000610 INF: FPGA: Xmit ZDACW 28633\n [Z Motor]
17-03-18 03:21:46.254 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:21:46.264 -07 000000610 INF: FPGA: 'ZDACW 28633' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.264 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:46.264 -07 000000461 INF: FPGA: Recv ZDACR 28633
17-03-18 03:21:46.274 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.274 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:46.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:46.424 -07 000000424 INF: FPGA: Recv ZSGSRD 29692
17-03-18 03:21:46.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:46.434 -07 000000501 INF: FPGA: Recv ZSGSRD 29695
17-03-18 03:21:46.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:46.444 -07 000000467 INF: FPGA: Recv ZSGSRD 29690
17-03-18 03:21:46.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:46.454 -07 000000590 INF: FPGA: Recv ZSGSRD 29691
17-03-18 03:21:46.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:46.464 -07 000000455 INF: FPGA: Recv ZSGSRD 29693
17-03-18 03:21:46.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:46.474 -07 000000512 INF: FPGA: Recv ZSGSRD 29690
17-03-18 03:21:46.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:46.484 -07 000000626 INF: FPGA: Recv ZSGSRD 29689
17-03-18 03:21:46.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:46.494 -07 000000579 INF: FPGA: Recv ZSGSRD 29694
17-03-18 03:21:46.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:46.504 -07 000000424 INF: FPGA: Recv ZSGSRD 29697
17-03-18 03:21:46.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:46.514 -07 000000629 INF: FPGA: Recv ZSGSRD 29691
17-03-18 03:21:46.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.524 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:46.524 -07 000000512 INF: FPGA: Recv ZPIEZORD 25190
17-03-18 03:21:46.534 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:46.534 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.369 V. Piezo Error = -9.9 V.
17-03-18 03:21:46.534 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.1 um, Read 10 ADC samples: Avg = 29692 (-130.3 uncal um), Error = 0.8 uncal um, Median = 29692 (-130.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29689 (-130.3 uncal um), Max = 29697 (-130.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:21:46.534 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29692, posNoise = 5, negNoise = 3
17-03-18 03:21:46.534 -07 000000610 INF: Z Motor: After move to -0.131073, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:46.534 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:21:46.534 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:46.534 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:46.534 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:46.534 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:46.534 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:46.534 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:46.534 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:46.534 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:46.534 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:46.534 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:46.534 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:46.534 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:46.544 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:21:46.544 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:46.544 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:21:46.544 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:46.544 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:21:46.544 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:21:46.544 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:21:46.544 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:21:46.554 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28810 150\n [Camera]
17-03-18 03:21:46.564 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:46.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:46.754 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:47.154 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:47.154 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:47.154 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:47.154 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:47.154 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:21:47.154 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:47.154 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:47.164 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:47.164 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:47.164 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 03:21:47.344 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28810 789
17-03-18 03:21:47.494 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:47.534 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:21:47.534 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:21:47.534 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:47.534 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:21:47.534 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:21:47.534 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:47.544 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:47.544 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:21:47.544 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:47.544 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:21:47.694 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:47.694 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:47.694 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:47.694 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:47.694 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:47.694 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 03:21:47.694 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:47.694 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:47.694 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:47.694 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 03:21:47.884 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.989471,
17-03-18 03:21:47.884 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:21:47.884 -07 000000629 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:47.884 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28810 150' command took 2 ms to send, 1326 ms to get response, and 1333 ms overall
17-03-18 03:21:47.884 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.131410
17-03-18 03:21:47.884 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13141 mm
17-03-18 03:21:47.884 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:47.894 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:21:47.894 -07 000000462 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-18 03:21:47.894 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 28707, sync = True, waitForSettling = False)
17-03-18 03:21:47.894 -07 000000501 INF: Z Motor: Moving to -0.131412 mm, started at -0.131071 mm, distance = -0.34 um
17-03-18 03:21:47.904 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:47.904 -07 000000512 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:21:47.914 -07 000000501 INF: FPGA: Xmit ZDACW 28707\n [Z Motor]
17-03-18 03:21:47.914 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:21:47.914 -07 000000462 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:47.914 -07 000000462 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:47.914 -07 000000462 INF: Y Motor: Moving 1341 steps-18
17-03-18 03:21:47.914 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:21:47.924 -07 000000501 INF: FPGA: 'ZDACW 28707' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:21:47.934 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:47.944 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:47.944 -07 000000569 INF: FPGA: Recv ZDACR 28707
17-03-18 03:21:47.954 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:21:47.954 -07 000000501 INF: Z Motor: MoveAbsStepped took 58 ms (did NOT wait for settling yet))
17-03-18 03:21:48.084 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 391 ms.
17-03-18 03:21:48.084 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:21:48.084 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:48.084 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 389 ms.
17-03-18 03:21:48.084 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:21:48.084 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:48.094 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:48.094 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:21:48.094 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:48.104 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:21:48.304 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:21:48.304 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:21:48.354 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:48.354 -07 000000512 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:21:48.364 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:48.364 -07 000000462 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:48.364 -07 000000462 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:21:48.364 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.111 mm/sec
17-03-18 03:21:49.314 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:49.314 -07 000000502 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:21:49.324 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.324 -07 000000462 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:49.354 -07 000000462 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:49.354 -07 000000462 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:21:49.354 -07 000000462 INF: Y Motor: Moved to 66.5391 after 1460 ms (table move)
17-03-18 03:21:49.354 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131412 mm (DAC = 28707)
17-03-18 03:21:49.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.354 -07 000000455 INF: FPGA: Recv ZSGSRD 29747
17-03-18 03:21:49.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:49.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.364 -07 000000430 INF: FPGA: Recv ZSGSRD 29745
17-03-18 03:21:49.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.374 -07 000000590 INF: FPGA: Recv ZSGSRD 29741
17-03-18 03:21:49.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.384 -07 000000576 INF: FPGA: Recv ZSGSRD 29746
17-03-18 03:21:49.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.394 -07 000000502 INF: FPGA: Recv ZSGSRD 29748
17-03-18 03:21:49.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.404 -07 000000461 INF: FPGA: Recv ZSGSRD 29743
17-03-18 03:21:49.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.414 -07 000000591 INF: FPGA: Recv ZSGSRD 29743
17-03-18 03:21:49.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.424 -07 000000462 INF: FPGA: Recv ZSGSRD 29752
17-03-18 03:21:49.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.434 -07 000000576 INF: FPGA: Recv ZSGSRD 29741
17-03-18 03:21:49.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.444 -07 000000579 INF: FPGA: Recv ZSGSRD 29746
17-03-18 03:21:49.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.454 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:49.454 -07 000000455 INF: FPGA: Recv ZPIEZORD 25304
17-03-18 03:21:49.464 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.464 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.380 V. Piezo Error = -9.7 V.
17-03-18 03:21:49.464 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29745 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29746 (-130.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29741 (-130.6 uncal um), Max = 29752 (-130.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:21:49.464 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29745, posNoise = 7, negNoise = 4
17-03-18 03:21:49.464 -07 000000610 INF: Z Motor: After move to -0.131412, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:49.464 -07 000000610 INF: Z Motor: Settle wait time = 1462 ms, measure time = 107 ms (allowed 150 ms), total time = 1569 ms
17-03-18 03:21:49.464 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:49.514 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1621 ms
17-03-18 03:21:49.514 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:49.514 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.131411542167815. ----------
17-03-18 03:21:49.514 -07 000000610 INF: Cycle	111	Tile	9	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:49.514 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28530, sync = True, waitForSettling = True)
17-03-18 03:21:49.514 -07 000000610 INF: Z Motor: Moving to -0.130602 mm, started at -0.131412 mm, distance = 0.81 um
17-03-18 03:21:49.514 -07 000000610 INF: FPGA: Xmit ZDACW 28530\n [Z Motor]
17-03-18 03:21:49.514 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:21:49.524 -07 000000610 INF: FPGA: 'ZDACW 28530' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:49.524 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:49.524 -07 000000629 INF: FPGA: Recv ZDACR 28530
17-03-18 03:21:49.534 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.534 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:49.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.684 -07 000000512 INF: FPGA: Recv ZSGSRD 29618
17-03-18 03:21:49.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.694 -07 000000606 INF: FPGA: Recv ZSGSRD 29624
17-03-18 03:21:49.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.704 -07 000000467 INF: FPGA: Recv ZSGSRD 29627
17-03-18 03:21:49.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.714 -07 000000591 INF: FPGA: Recv ZSGSRD 29611
17-03-18 03:21:49.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.724 -07 000000502 INF: FPGA: Recv ZSGSRD 29623
17-03-18 03:21:49.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.734 -07 000000576 INF: FPGA: Recv ZSGSRD 29622
17-03-18 03:21:49.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.744 -07 000000462 INF: FPGA: Recv ZSGSRD 29616
17-03-18 03:21:49.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.754 -07 000000444 INF: FPGA: Recv ZSGSRD 29622
17-03-18 03:21:49.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.764 -07 000000424 INF: FPGA: Recv ZSGSRD 29615
17-03-18 03:21:49.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:49.774 -07 000000501 INF: FPGA: Recv ZSGSRD 29626
17-03-18 03:21:49.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.784 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:49.784 -07 000000606 INF: FPGA: Recv ZPIEZORD 25130
17-03-18 03:21:49.794 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:49.794 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.353 V. Piezo Error = -9.8 V.
17-03-18 03:21:49.794 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29620 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29622 (-129.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29611 (-129.8 uncal um), Max = 29627 (-129.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:21:49.794 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29620, posNoise = 7, negNoise = 9
17-03-18 03:21:49.794 -07 000000610 INF: Z Motor: After move to -0.130602, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:49.794 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:21:49.794 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:49.794 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:49.794 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:49.794 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:49.794 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:49.794 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:49.794 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:49.794 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:49.794 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:49.794 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:49.794 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:49.794 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:49.794 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:21:49.804 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:49.804 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:21:49.804 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:49.804 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:21:49.804 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:21:49.814 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:21:49.814 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:21:49.814 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28707 150\n [Camera]
17-03-18 03:21:50.014 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:50.414 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:50.414 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:50.414 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:50.414 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:50.414 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 03:21:50.414 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:50.424 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:50.424 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:50.424 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:50.424 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 03:21:50.604 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28707 789
17-03-18 03:21:50.754 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:50.804 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:21:50.804 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:21:50.804 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:50.804 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:21:50.804 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:21:50.804 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:50.804 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:50.804 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:50.804 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:21:50.814 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:21:50.954 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:50.954 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:50.954 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:50.954 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:50.954 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-18 03:21:50.954 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:50.954 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:50.954 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:50.954 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:50.954 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-18 03:21:51.144 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:21:51.144 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:51.144 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28707 150' command took 2 ms to send, 1325 ms to get response, and 1333 ms overall
17-03-18 03:21:51.144 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131524
17-03-18 03:21:51.144 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13152 mm
17-03-18 03:21:51.144 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:51.154 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 28731, sync = True, waitForSettling = False)
17-03-18 03:21:51.154 -07 000000561 INF: Z Motor: Moving to -0.131522 mm, started at -0.130609 mm, distance = -0.91 um
17-03-18 03:21:51.154 -07 000000561 INF: FPGA: Xmit ZDACW 28731\n [Z Motor]
17-03-18 03:21:51.154 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:21:51.154 -07 000000629 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-18 03:21:51.154 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:21:51.164 -07 000000561 INF: FPGA: 'ZDACW 28731' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:21:51.164 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:51.164 -07 000000579 INF: FPGA: Recv ZDACR 28731
17-03-18 03:21:51.174 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:51.174 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:51.174 -07 000000561 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet))
17-03-18 03:21:51.174 -07 000000501 INF: FPGA: Recv YRDPOS 136273
17-03-18 03:21:51.184 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:21:51.184 -07 000000629 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:51.184 -07 000000629 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:51.184 -07 000000629 INF: Y Motor: Moving 1349 steps-28
17-03-18 03:21:51.184 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:51.344 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:21:51.344 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:21:51.344 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:51.344 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:21:51.344 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:21:51.344 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:51.344 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:21:51.344 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:21:51.344 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:21:51.354 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:21:51.564 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:21:51.564 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 374 ms to get response, and 378 ms overall
17-03-18 03:21:51.564 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:51.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:51.614 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:51.614 -07 000000502 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:21:51.624 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:51.624 -07 000000629 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:51.624 -07 000000629 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-18 03:21:51.624 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.232 mm/sec
17-03-18 03:21:52.574 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:52.574 -07 000000424 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:21:52.584 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:52.584 -07 000000629 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:52.604 -07 000000629 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:52.604 -07 000000629 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:21:52.604 -07 000000629 INF: Y Motor: Moved to 67.3721 after 1456 ms (table move)
17-03-18 03:21:52.614 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131522 mm (DAC = 28731)
17-03-18 03:21:52.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.614 -07 000000561 INF: FPGA: Recv ZSGSRD 29759
17-03-18 03:21:52.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:52.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.624 -07 000000462 INF: FPGA: Recv ZSGSRD 29763
17-03-18 03:21:52.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.634 -07 000000576 INF: FPGA: Recv ZSGSRD 29762
17-03-18 03:21:52.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.644 -07 000000618 INF: FPGA: Recv ZSGSRD 29761
17-03-18 03:21:52.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.654 -07 000000461 INF: FPGA: Recv ZSGSRD 29761
17-03-18 03:21:52.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.664 -07 000000561 INF: FPGA: Recv ZSGSRD 29760
17-03-18 03:21:52.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.674 -07 000000569 INF: FPGA: Recv ZSGSRD 29762
17-03-18 03:21:52.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.684 -07 000000629 INF: FPGA: Recv ZSGSRD 29765
17-03-18 03:21:52.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.694 -07 000000618 INF: FPGA: Recv ZSGSRD 29768
17-03-18 03:21:52.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.704 -07 000000590 INF: FPGA: Recv ZSGSRD 29766
17-03-18 03:21:52.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.714 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:52.714 -07 000000579 INF: FPGA: Recv ZPIEZORD 25322
17-03-18 03:21:52.724 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.724 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.384 V. Piezo Error = -9.7 V.
17-03-18 03:21:52.724 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.5 um, Read 10 ADC samples: Avg = 29763 (-130.7 uncal um), Error = 0.8 uncal um, Median = 29762 (-130.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29759 (-130.7 uncal um), Max = 29768 (-130.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:21:52.724 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29763, posNoise = 5, negNoise = 4
17-03-18 03:21:52.724 -07 000000610 INF: Z Motor: After move to -0.131522, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:52.724 -07 000000610 INF: Z Motor: Settle wait time = 1459 ms, measure time = 109 ms (allowed 150 ms), total time = 1568 ms
17-03-18 03:21:52.724 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:52.774 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1620 ms
17-03-18 03:21:52.774 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:52.774 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.131527177986366. ----------
17-03-18 03:21:52.774 -07 000000610 INF: Cycle	111	Tile	10	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:52.774 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28555, sync = True, waitForSettling = True)
17-03-18 03:21:52.774 -07 000000610 INF: Z Motor: Moving to -0.130716 mm, started at -0.131527 mm, distance = 0.81 um
17-03-18 03:21:52.774 -07 000000610 INF: FPGA: Xmit ZDACW 28555\n [Z Motor]
17-03-18 03:21:52.774 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:21:52.784 -07 000000610 INF: FPGA: 'ZDACW 28555' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:21:52.784 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:52.784 -07 000000502 INF: FPGA: Recv ZDACR 28555
17-03-18 03:21:52.794 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.794 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:52.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.944 -07 000000444 INF: FPGA: Recv ZSGSRD 29642
17-03-18 03:21:52.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:52.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.954 -07 000000430 INF: FPGA: Recv ZSGSRD 29632
17-03-18 03:21:52.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.974 -07 000000591 INF: FPGA: Recv ZSGSRD 29638
17-03-18 03:21:52.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:52.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.984 -07 000000561 INF: FPGA: Recv ZSGSRD 29636
17-03-18 03:21:52.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:52.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:52.994 -07 000000512 INF: FPGA: Recv ZSGSRD 29644
17-03-18 03:21:53.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:53.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:53.004 -07 000000462 INF: FPGA: Recv ZSGSRD 29638
17-03-18 03:21:53.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:53.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:53.014 -07 000000569 INF: FPGA: Recv ZSGSRD 29642
17-03-18 03:21:53.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:53.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:53.024 -07 000000430 INF: FPGA: Recv ZSGSRD 29638
17-03-18 03:21:53.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:53.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:53.034 -07 000000501 INF: FPGA: Recv ZSGSRD 29638
17-03-18 03:21:53.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:53.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:53.044 -07 000000467 INF: FPGA: Recv ZSGSRD 29641
17-03-18 03:21:53.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:53.054 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:53.054 -07 000000606 INF: FPGA: Recv ZPIEZORD 25167
17-03-18 03:21:53.064 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:53.064 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.357 V. Piezo Error = -9.8 V.
17-03-18 03:21:53.064 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29639 (-130.0 uncal um), Error = 0.8 uncal um, Median = 29638 (-129.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29632 (-129.9 uncal um), Max = 29644 (-130.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:21:53.064 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29639, posNoise = 5, negNoise = 7
17-03-18 03:21:53.064 -07 000000610 INF: Z Motor: After move to -0.130716, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:53.064 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-18 03:21:53.064 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:53.064 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:53.064 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:53.064 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:53.064 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:53.064 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:53.064 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:53.064 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:53.064 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:53.064 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:53.064 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:53.064 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:53.064 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:21:53.064 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:53.074 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:21:53.074 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:53.084 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:21:53.084 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:21:53.084 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms.
17-03-18 03:21:53.084 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:21:53.084 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28731 150\n [Camera]
17-03-18 03:21:53.284 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.003063,
17-03-18 03:21:53.284 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:53.694 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:53.694 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:53.694 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:53.694 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:53.694 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start.
17-03-18 03:21:53.694 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:53.694 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:53.694 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:53.694 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:53.694 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-18 03:21:53.884 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28731 789
17-03-18 03:21:54.034 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:54.094 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 403 ms.
17-03-18 03:21:54.094 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:21:54.094 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:54.104 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 402 ms.
17-03-18 03:21:54.104 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:21:54.104 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:54.104 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:21:54.104 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms.
17-03-18 03:21:54.104 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:21:54.114 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 418 ms.
17-03-18 03:21:54.234 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:21:54.234 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:21:54.234 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:54.234 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:54.234 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start.
17-03-18 03:21:54.234 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:21:54.234 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:21:54.234 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:54.234 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:54.234 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start.
17-03-18 03:21:54.424 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:21:54.424 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:54.424 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28731 150' command took 2 ms to send, 1322 ms to get response, and 1332 ms overall
17-03-18 03:21:54.424 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.130995
17-03-18 03:21:54.424 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13100 mm
17-03-18 03:21:54.424 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:54.424 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:21:54.424 -07 000000579 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-18 03:21:54.424 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:54.424 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 28616, sync = True, waitForSettling = False)
17-03-18 03:21:54.424 -07 000000576 INF: Z Motor: Moving to -0.130996 mm, started at -0.130731 mm, distance = -0.27 um
17-03-18 03:21:54.434 -07 000000462 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:21:54.434 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:21:54.434 -07 000000579 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:54.434 -07 000000579 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:54.434 -07 000000579 INF: Y Motor: Moving 1345 steps-22
17-03-18 03:21:54.434 -07 000000576 INF: FPGA: Xmit ZDACW 28616\n [Z Motor]
17-03-18 03:21:54.434 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:21:54.444 -07 000000576 INF: FPGA: 'ZDACW 28616' command took 1 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:21:54.444 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:54.444 -07 000000606 INF: FPGA: Recv ZDACR 28616
17-03-18 03:21:54.454 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:54.454 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:54.454 -07 000000576 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:21:54.614 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:21:54.614 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:21:54.614 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:54.614 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:21:54.614 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:54.614 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:21:54.614 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:21:54.614 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:54.614 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:21:54.624 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:21:54.824 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:21:54.834 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 399 ms overall
17-03-18 03:21:54.874 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:54.884 -07 000000626 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:21:54.884 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:21:54.884 -07 000000579 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:54.884 -07 000000579 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:21:54.884 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.841 mm, average velocity = 2.107 mm/sec
17-03-18 03:21:55.834 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:55.834 -07 000000444 INF: FPGA: Recv YRDPOS 139685
17-03-18 03:21:55.844 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:55.844 -07 000000579 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:55.864 -07 000000579 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:55.864 -07 000000579 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:21:55.864 -07 000000579 INF: Y Motor: Moved to 68.2056 after 1442 ms (table move)
17-03-18 03:21:55.874 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130996 mm (DAC = 28616)
17-03-18 03:21:55.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:55.874 -07 000000501 INF: FPGA: Recv ZSGSRD 29677
17-03-18 03:21:55.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:55.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:55.884 -07 000000626 INF: FPGA: Recv ZSGSRD 29680
17-03-18 03:21:55.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:55.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:55.894 -07 000000569 INF: FPGA: Recv ZSGSRD 29690
17-03-18 03:21:55.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:55.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:55.904 -07 000000444 INF: FPGA: Recv ZSGSRD 29682
17-03-18 03:21:55.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:55.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:55.914 -07 000000591 INF: FPGA: Recv ZSGSRD 29680
17-03-18 03:21:55.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:55.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:55.924 -07 000000629 INF: FPGA: Recv ZSGSRD 29685
17-03-18 03:21:55.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:55.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:55.934 -07 000000461 INF: FPGA: Recv ZSGSRD 29679
17-03-18 03:21:55.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:55.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:55.944 -07 000000424 INF: FPGA: Recv ZSGSRD 29678
17-03-18 03:21:55.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:55.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:55.954 -07 000000606 INF: FPGA: Recv ZSGSRD 29677
17-03-18 03:21:55.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:55.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:55.964 -07 000000579 INF: FPGA: Recv ZSGSRD 29686
17-03-18 03:21:55.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:55.974 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:55.974 -07 000000502 INF: FPGA: Recv ZPIEZORD 25263
17-03-18 03:21:55.984 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:55.984 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.367 V. Piezo Error = -9.7 V.
17-03-18 03:21:55.984 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.0 um, Read 10 ADC samples: Avg = 29681 (-130.2 uncal um), Error = 0.8 uncal um, Median = 29680 (-130.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29677 (-130.2 uncal um), Max = 29690 (-130.3 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:21:55.984 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29681, posNoise = 9, negNoise = 4
17-03-18 03:21:55.984 -07 000000610 INF: Z Motor: After move to -0.130996, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:55.984 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 109 ms (allowed 150 ms), total time = 1553 ms
17-03-18 03:21:55.984 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:56.034 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms
17-03-18 03:21:56.034 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:56.034 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.131000392590742. ----------
17-03-18 03:21:56.034 -07 000000610 INF: Cycle	111	Tile	11	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:21:56.034 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28439, sync = True, waitForSettling = True)
17-03-18 03:21:56.034 -07 000000610 INF: Z Motor: Moving to -0.130185 mm, started at -0.131000 mm, distance = 0.81 um
17-03-18 03:21:56.034 -07 000000610 INF: FPGA: Xmit ZDACW 28439\n [Z Motor]
17-03-18 03:21:56.034 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:21:56.044 -07 000000610 INF: FPGA: 'ZDACW 28439' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:21:56.044 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:56.044 -07 000000430 INF: FPGA: Recv ZDACR 28439
17-03-18 03:21:56.054 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:56.054 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:21:56.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:56.204 -07 000000462 INF: FPGA: Recv ZSGSRD 29559
17-03-18 03:21:56.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:21:56.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:56.214 -07 000000579 INF: FPGA: Recv ZSGSRD 29556
17-03-18 03:21:56.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:56.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:56.224 -07 000000629 INF: FPGA: Recv ZSGSRD 29549
17-03-18 03:21:56.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:56.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:56.234 -07 000000461 INF: FPGA: Recv ZSGSRD 29559
17-03-18 03:21:56.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:56.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:56.244 -07 000000561 INF: FPGA: Recv ZSGSRD 29553
17-03-18 03:21:56.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:56.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:56.254 -07 000000455 INF: FPGA: Recv ZSGSRD 29555
17-03-18 03:21:56.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:56.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:56.264 -07 000000467 INF: FPGA: Recv ZSGSRD 29554
17-03-18 03:21:56.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:56.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:56.274 -07 000000424 INF: FPGA: Recv ZSGSRD 29555
17-03-18 03:21:56.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:56.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:56.284 -07 000000618 INF: FPGA: Recv ZSGSRD 29563
17-03-18 03:21:56.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:56.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:56.294 -07 000000569 INF: FPGA: Recv ZSGSRD 29554
17-03-18 03:21:56.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:56.304 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:56.304 -07 000000461 INF: FPGA: Recv ZPIEZORD 25068
17-03-18 03:21:56.314 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:56.314 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.340 V. Piezo Error = -9.8 V.
17-03-18 03:21:56.314 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.2 um, Read 10 ADC samples: Avg = 29556 (-129.4 uncal um), Error = 0.8 uncal um, Median = 29555 (-129.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29549 (-129.4 uncal um), Max = 29563 (-129.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:21:56.314 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29556, posNoise = 7, negNoise = 7
17-03-18 03:21:56.314 -07 000000610 INF: Z Motor: After move to -0.130185, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:56.314 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:21:56.314 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:56.314 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:56.314 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:56.314 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:21:56.314 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:56.314 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:56.314 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:21:56.314 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:21:56.314 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:56.314 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:21:56.314 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:21:56.314 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:21:56.324 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:21:56.324 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:21:56.324 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:21:56.324 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:21:56.334 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:21:56.334 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:21:56.334 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:21:56.334 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:21:56.334 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28616 150\n [Camera]
17-03-18 03:21:56.534 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:21:56.564 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:21:56.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:21:56.944 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:21:56.944 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:21:56.944 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:56.944 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:56.944 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-18 03:21:56.944 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:21:56.944 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:21:56.944 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:56.944 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:56.944 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-18 03:21:57.134 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28616 789
17-03-18 03:21:57.284 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:21:57.324 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:21:57.324 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:21:57.324 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:57.324 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:21:57.324 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:21:57.324 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:57.324 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:21:57.324 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:21:57.324 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:21:57.334 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:21:57.484 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1134
17-03-18 03:21:57.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1134
17-03-18 03:21:57.484 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:21:57.484 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:21:57.484 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) start.
17-03-18 03:21:57.484 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1134
17-03-18 03:21:57.484 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1134
17-03-18 03:21:57.484 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:21:57.484 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:21:57.484 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-18 03:21:57.674 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:21:57.674 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:21:57.674 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28616 150' command took 2 ms to send, 1321 ms to get response, and 1332 ms overall
17-03-18 03:21:57.674 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:21:57.674 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.20556640625, Z-Position -0.130197366073022. ------
17-03-18 03:21:57.674 -07 000000579 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13690 mm
17-03-18 03:21:57.674 -07 000000579 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:21:57.674 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:21:57.684 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:21:57.684 -07 000000462 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm
17-03-18 03:21:57.684 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:57.684 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 29907, sync = True, waitForSettling = False)
17-03-18 03:21:57.684 -07 000000461 INF: Z Motor: Moving to -0.136905 mm, started at -0.130197 mm, distance = -6.71 um
17-03-18 03:21:57.684 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:21:57.684 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:21:57.684 -07 000000501 INF: FPGA: Recv YRDPOS 139685
17-03-18 03:21:57.694 -07 000000561 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:21:57.694 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:21:57.694 -07 000000462 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:57.694 -07 000000462 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:21:57.694 -07 000000462 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:21:57.704 -07 000000461 INF: FPGA: Xmit ZDACW 29907\n [Z Motor]
17-03-18 03:21:57.704 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:21:57.714 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:21:57.714 -07 000000461 INF: FPGA: 'ZDACW 29907' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-18 03:21:57.724 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:21:57.724 -07 000000590 INF: FPGA: Recv ZDACR 29907
17-03-18 03:21:57.734 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:21:57.734 -07 000000461 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-18 03:21:57.864 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:21:57.864 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:21:57.864 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:57.874 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:21:57.874 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:21:57.874 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:57.874 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:57.874 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:21:57.874 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:21:57.884 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:21:57.894 -07 000000461 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:21:57.894 -07 000000561 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 210 ms overall
17-03-18 03:21:58.084 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:21:58.084 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:21:58.134 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:58.134 -07 000000561 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:21:58.144 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:21:58.144 -07 000000462 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:58.144 -07 000000462 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:21:58.144 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.837 mm, average velocity = 2.108 mm/sec
17-03-18 03:21:58.644 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.001704,
17-03-18 03:21:59.094 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:21:59.094 -07 000000444 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:21:59.104 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:59.104 -07 000000462 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:21:59.134 -07 000000462 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:21:59.134 -07 000000462 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:21:59.134 -07 000000462 INF: Y Motor: Moved to 69.0273 after 1449 ms (table move)
17-03-18 03:21:59.134 -07 000000579 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136905 mm (DAC = 29907)
17-03-18 03:21:59.134 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:59.134 -07 000000576 INF: FPGA: Recv ZSGSRD 30607
17-03-18 03:21:59.144 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:21:59.144 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:59.144 -07 000000424 INF: FPGA: Recv ZSGSRD 30607
17-03-18 03:21:59.154 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:59.154 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:59.154 -07 000000444 INF: FPGA: Recv ZSGSRD 30606
17-03-18 03:21:59.164 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:59.164 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:59.164 -07 000000591 INF: FPGA: Recv ZSGSRD 30603
17-03-18 03:21:59.174 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:59.174 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:59.174 -07 000000462 INF: FPGA: Recv ZSGSRD 30600
17-03-18 03:21:59.184 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:59.184 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:59.184 -07 000000629 INF: FPGA: Recv ZSGSRD 30604
17-03-18 03:21:59.194 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:59.194 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:59.194 -07 000000618 INF: FPGA: Recv ZSGSRD 30599
17-03-18 03:21:59.204 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:59.204 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:59.204 -07 000000444 INF: FPGA: Recv ZSGSRD 30600
17-03-18 03:21:59.214 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:59.214 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:59.214 -07 000000430 INF: FPGA: Recv ZSGSRD 30598
17-03-18 03:21:59.224 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:59.224 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:21:59.224 -07 000000512 INF: FPGA: Recv ZSGSRD 30605
17-03-18 03:21:59.234 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:59.234 -07 000000579 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:21:59.234 -07 000000629 INF: FPGA: Recv ZPIEZORD 26427
17-03-18 03:21:59.244 -07 000000579 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:21:59.244 -07 000000579 INF: Z Motor: Piezo is near 36.5 V (nominally 0 to 100 V), expect near 45.6 V, since DAC is at 4.564 V. Piezo Error = -9.2 V.
17-03-18 03:21:59.244 -07 000000579 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.9 um, Read 10 ADC samples: Avg = 30603 (-136.1 uncal um), Error = 0.8 uncal um, Median = 30604 (-136.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 30598 (-136.1 uncal um), Max = 30607 (-136.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:21:59.244 -07 000000579 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30603, posNoise = 4, negNoise = 5
17-03-18 03:21:59.244 -07 000000579 INF: Z Motor: After move to -0.136905, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:21:59.244 -07 000000579 INF: Z Motor: Settle wait time = 1452 ms, measure time = 106 ms (allowed 150 ms), total time = 1558 ms
17-03-18 03:21:59.244 -07 000000579 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:21:59.294 -07 000000579 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-18 03:21:59.294 -07 000000579 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:21:59.294 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:21:59.294 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:21:59.294 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:21:59.294 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:21:59.294 -07 000000501 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:21:59.294 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:21:59.294 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:21:59.294 -07 000000501 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:21:59.304 -07 000000501 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:21:59.304 -07 000000501 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:21:59.314 -07 000000501 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:21:59.314 -07 000000501 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:21:59.314 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:21:59.364 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:21:59.664 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:21:59.664 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:21:59.664 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:21:59.664 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) start.
17-03-18 03:21:59.694 -07 000000467 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:21:59.834 -07 000000590 INF: FPGA: Recv CAMSNAP
17-03-18 03:21:59.844 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 519 ms to get response, and 524 ms overall
17-03-18 03:21:59.844 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) end. Duration was 178 ms.
17-03-18 03:21:59.844 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:21:59.844 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 03:21:59.844 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 181 ms.
17-03-18 03:21:59.944 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:21:59.944 -07 000000424 INF: Autofocus start
17-03-18 03:21:59.944 -07 000000424 INF: MeasureProfile start
17-03-18 03:21:59.944 -07 000000461 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:21:59.954 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:21:59.954 -07 000000591 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:21:59.954 -07 000000424 INF: MeasureProfile done
17-03-18 03:21:59.954 -07 000000424 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:21:59.954 -07 000000424 INF: Autofocus finished
17-03-18 03:22:00.154 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:22:00.154 -07 000000591 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:22:00.154 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.136923516185446. ----------
17-03-18 03:22:00.164 -07 000000610 INF: Cycle	111	Tile	12	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:22:00.164 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28414, sync = True, waitForSettling = True)
17-03-18 03:22:00.164 -07 000000610 INF: Z Motor: Moving to -0.130071 mm, started at -0.136924 mm, distance = 6.85 um
17-03-18 03:22:00.164 -07 000000610 INF: FPGA: Xmit ZDACW 28414\n [Z Motor]
17-03-18 03:22:00.164 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:22:00.174 -07 000000610 INF: FPGA: 'ZDACW 28414' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:22:00.174 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:00.174 -07 000000461 INF: FPGA: Recv ZDACR 28414
17-03-18 03:22:00.184 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.184 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:22:00.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:00.334 -07 000000502 INF: FPGA: Recv ZSGSRD 29542
17-03-18 03:22:00.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:00.344 -07 000000606 INF: FPGA: Recv ZSGSRD 29536
17-03-18 03:22:00.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:00.354 -07 000000561 INF: FPGA: Recv ZSGSRD 29539
17-03-18 03:22:00.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:00.364 -07 000000444 INF: FPGA: Recv ZSGSRD 29540
17-03-18 03:22:00.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:00.374 -07 000000455 INF: FPGA: Recv ZSGSRD 29538
17-03-18 03:22:00.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:00.384 -07 000000579 INF: FPGA: Recv ZSGSRD 29533
17-03-18 03:22:00.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:00.394 -07 000000569 INF: FPGA: Recv ZSGSRD 29541
17-03-18 03:22:00.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:00.404 -07 000000430 INF: FPGA: Recv ZSGSRD 29535
17-03-18 03:22:00.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:00.414 -07 000000590 INF: FPGA: Recv ZSGSRD 29538
17-03-18 03:22:00.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:00.424 -07 000000629 INF: FPGA: Recv ZSGSRD 29538
17-03-18 03:22:00.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.434 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:00.434 -07 000000626 INF: FPGA: Recv ZPIEZORD 25045
17-03-18 03:22:00.444 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:00.444 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.336 V. Piezo Error = -9.9 V.
17-03-18 03:22:00.444 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.1 um, Read 10 ADC samples: Avg = 29538 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29538 (-129.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29533 (-129.3 uncal um), Max = 29542 (-129.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:22:00.444 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29538, posNoise = 4, negNoise = 5
17-03-18 03:22:00.444 -07 000000610 INF: Z Motor: After move to -0.130071, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:00.444 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:22:00.444 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:22:00.444 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:22:00.444 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:22:00.444 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:22:00.444 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:22:00.444 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:22:00.444 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:22:00.444 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:22:00.444 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:22:00.444 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:22:00.444 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:22:00.444 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:22:00.454 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:22:00.454 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:22:00.454 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:22:00.454 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:22:00.464 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:22:00.464 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:22:00.464 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:22:00.464 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:22:00.474 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28591 150\n [Camera]
17-03-18 03:22:00.674 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:22:01.084 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:22:01.084 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:22:01.084 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:01.084 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:22:01.084 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:22:01.084 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:01.084 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:01.084 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 580417384, 0x0, 391868352) start.
17-03-18 03:22:01.094 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:01.094 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:22:01.274 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28591 789
17-03-18 03:22:01.424 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:22:01.464 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 580417384, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:22:01.464 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:22:01.464 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:01.474 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:22:01.474 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:22:01.474 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:01.474 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:22:01.474 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:22:01.474 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:22:01.484 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:22:01.564 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:22:01.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:22:01.614 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:22:01.614 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:22:01.614 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:01.614 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:22:01.614 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:22:01.614 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:01.734 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:01.734 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:22:01.734 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:01.734 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:22:01.804 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:22:01.804 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:22:01.804 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28591 150' command took 2 ms to send, 1327 ms to get response, and 1333 ms overall
17-03-18 03:22:01.804 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.130518
17-03-18 03:22:01.814 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13052 mm
17-03-18 03:22:01.814 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:22:01.814 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:22:01.814 -07 000000569 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-18 03:22:01.814 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:01.814 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 28512, sync = True, waitForSettling = False)
17-03-18 03:22:01.814 -07 000000590 INF: Z Motor: Moving to -0.130520 mm, started at -0.130082 mm, distance = -0.44 um
17-03-18 03:22:01.814 -07 000000618 INF: FPGA: Recv YRDPOS 141369
17-03-18 03:22:01.824 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:22:01.824 -07 000000569 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:01.824 -07 000000590 INF: FPGA: Xmit ZDACW 28512\n [Z Motor]
17-03-18 03:22:01.824 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:22:01.824 -07 000000569 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:22:01.824 -07 000000569 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:22:01.834 -07 000000590 INF: FPGA: 'ZDACW 28512' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:22:01.834 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:01.834 -07 000000618 INF: FPGA: Recv ZDACR 28512
17-03-18 03:22:01.844 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:22:01.844 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:01.844 -07 000000590 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:22:02.114 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:22:02.114 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:22:02.114 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:02.114 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:22:02.114 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:22:02.114 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:02.114 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:22:02.124 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:22:02.124 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 506 ms.
17-03-18 03:22:02.124 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 507 ms.
17-03-18 03:22:02.214 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:22:02.214 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-18 03:22:02.264 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:02.264 -07 000000590 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:22:02.274 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:22:02.274 -07 000000569 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:02.274 -07 000000569 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:22:02.274 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.845 mm, average velocity = 2.145 mm/sec
17-03-18 03:22:03.244 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:03.244 -07 000000561 INF: FPGA: Recv YRDPOS 143081
17-03-18 03:22:03.254 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:22:03.254 -07 000000569 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:03.284 -07 000000569 INF: Y Motor: After move to 69.872612, error = -0.008842, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:22:03.284 -07 000000569 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:22:03.284 -07 000000569 INF: Y Motor: Moved to 69.8638 after 1468 ms (table move)
17-03-18 03:22:03.284 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130520 mm (DAC = 28512)
17-03-18 03:22:03.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.284 -07 000000629 INF: FPGA: Recv ZSGSRD 29611
17-03-18 03:22:03.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:22:03.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.294 -07 000000576 INF: FPGA: Recv ZSGSRD 29616
17-03-18 03:22:03.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.304 -07 000000512 INF: FPGA: Recv ZSGSRD 29605
17-03-18 03:22:03.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.314 -07 000000444 INF: FPGA: Recv ZSGSRD 29602
17-03-18 03:22:03.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.324 -07 000000618 INF: FPGA: Recv ZSGSRD 29605
17-03-18 03:22:03.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.334 -07 000000467 INF: FPGA: Recv ZSGSRD 29605
17-03-18 03:22:03.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.344 -07 000000461 INF: FPGA: Recv ZSGSRD 29611
17-03-18 03:22:03.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.354 -07 000000590 INF: FPGA: Recv ZSGSRD 29607
17-03-18 03:22:03.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.364 -07 000000606 INF: FPGA: Recv ZSGSRD 29611
17-03-18 03:22:03.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.374 -07 000000462 INF: FPGA: Recv ZSGSRD 29608
17-03-18 03:22:03.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.384 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:03.384 -07 000000455 INF: FPGA: Recv ZPIEZORD 25126
17-03-18 03:22:03.394 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.394 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.351 V. Piezo Error = -9.8 V.
17-03-18 03:22:03.394 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29608 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29608 (-129.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29602 (-129.7 uncal um), Max = 29616 (-129.8 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:22:03.394 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29608, posNoise = 8, negNoise = 6
17-03-18 03:22:03.394 -07 000000610 INF: Z Motor: After move to -0.130520, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:03.394 -07 000000610 INF: Z Motor: Settle wait time = 1471 ms, measure time = 106 ms (allowed 150 ms), total time = 1577 ms
17-03-18 03:22:03.394 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:22:03.444 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1630 ms
17-03-18 03:22:03.444 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:22:03.444 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86376953125, Z-position -0.130531425104393. ----------
17-03-18 03:22:03.444 -07 000000610 INF: Cycle	111	Tile	13	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:22:03.444 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28335, sync = True, waitForSettling = True)
17-03-18 03:22:03.444 -07 000000610 INF: Z Motor: Moving to -0.129709 mm, started at -0.130531 mm, distance = 0.82 um
17-03-18 03:22:03.444 -07 000000610 INF: FPGA: Xmit ZDACW 28335\n [Z Motor]
17-03-18 03:22:03.444 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:22:03.454 -07 000000610 INF: FPGA: 'ZDACW 28335' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:22:03.454 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:03.454 -07 000000467 INF: FPGA: Recv ZDACR 28335
17-03-18 03:22:03.464 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.464 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:22:03.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.614 -07 000000606 INF: FPGA: Recv ZSGSRD 29478
17-03-18 03:22:03.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:03.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.624 -07 000000561 INF: FPGA: Recv ZSGSRD 29479
17-03-18 03:22:03.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.634 -07 000000502 INF: FPGA: Recv ZSGSRD 29483
17-03-18 03:22:03.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.644 -07 000000430 INF: FPGA: Recv ZSGSRD 29477
17-03-18 03:22:03.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.654 -07 000000590 INF: FPGA: Recv ZSGSRD 29477
17-03-18 03:22:03.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.664 -07 000000579 INF: FPGA: Recv ZSGSRD 29482
17-03-18 03:22:03.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.674 -07 000000561 INF: FPGA: Recv ZSGSRD 29486
17-03-18 03:22:03.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.694 -07 000000502 INF: FPGA: Recv ZSGSRD 29482
17-03-18 03:22:03.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:22:03.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.704 -07 000000430 INF: FPGA: Recv ZSGSRD 29477
17-03-18 03:22:03.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:03.714 -07 000000618 INF: FPGA: Recv ZSGSRD 29482
17-03-18 03:22:03.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:03.724 -07 000000444 INF: FPGA: Recv ZPIEZORD 24985
17-03-18 03:22:03.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:03.734 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.324 V. Piezo Error = -9.9 V.
17-03-18 03:22:03.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.7 um, Read 10 ADC samples: Avg = 29480 (-128.9 uncal um), Error = 0.8 uncal um, Median = 29480 (-128.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29477 (-128.9 uncal um), Max = 29486 (-129.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:22:03.734 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29480, posNoise = 6, negNoise = 3
17-03-18 03:22:03.734 -07 000000610 INF: Z Motor: After move to -0.129709, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:03.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-18 03:22:03.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:22:03.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:22:03.734 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:22:03.734 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:22:03.734 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:22:03.734 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:22:03.734 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:22:03.734 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:22:03.734 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:22:03.734 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:22:03.734 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:22:03.734 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:22:03.734 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:22:03.734 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:22:03.744 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:22:03.744 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:22:03.744 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:22:03.744 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-18 03:22:03.754 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:22:03.754 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:22:03.754 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28512 150\n [Camera]
17-03-18 03:22:03.954 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:22:04.004 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 4.018051,
17-03-18 03:22:04.354 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:22:04.354 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:22:04.354 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:04.364 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:22:04.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:22:04.364 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:04.364 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:04.364 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 592887144, 0x0, 391868352) start.
17-03-18 03:22:04.364 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:04.364 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:22:04.554 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28512 789
17-03-18 03:22:04.694 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:22:04.744 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 592887144, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:22:04.744 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:22:04.744 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:04.744 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:22:04.744 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:22:04.744 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:04.744 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:22:04.744 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:22:04.744 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:22:04.754 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:22:04.894 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:22:04.894 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:22:04.894 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:04.894 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:22:04.894 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:22:04.894 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:04.904 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:04.904 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 03:22:04.904 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:04.904 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:22:05.084 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:22:05.084 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:22:05.084 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28512 150' command took 2 ms to send, 1326 ms to get response, and 1332 ms overall
17-03-18 03:22:05.084 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.129644
17-03-18 03:22:05.084 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.12964 mm
17-03-18 03:22:05.084 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:22:05.094 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:22:05.094 -07 000000576 INF: Y Motor: Moving to 70.7026 mm, started at 69.8638 mm, delta = 0.8388 mm
17-03-18 03:22:05.094 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:05.094 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 28321, sync = True, waitForSettling = False)
17-03-18 03:22:05.094 -07 000000561 INF: Z Motor: Moving to -0.129645 mm, started at -0.129709 mm, distance = 0.06 um
17-03-18 03:22:05.094 -07 000000579 INF: FPGA: Recv YRDPOS 143081
17-03-18 03:22:05.104 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:22:05.104 -07 000000576 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:05.104 -07 000000576 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:22:05.104 -07 000000576 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:22:05.104 -07 000000561 INF: FPGA: Xmit ZDACW 28321\n [Z Motor]
17-03-18 03:22:05.104 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:22:05.114 -07 000000561 INF: FPGA: 'ZDACW 28321' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:22:05.114 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:05.114 -07 000000424 INF: FPGA: Recv ZDACR 28321
17-03-18 03:22:05.124 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:22:05.124 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:05.124 -07 000000561 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 03:22:05.274 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:22:05.274 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:22:05.274 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:05.274 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:22:05.284 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:22:05.284 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:05.284 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:22:05.284 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:22:05.284 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:22:05.294 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:22:05.494 -07 000000430 INF: FPGA: Recv YMVTILE
17-03-18 03:22:05.494 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:22:05.544 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:05.544 -07 000000569 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:22:05.554 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:22:05.554 -07 000000576 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:05.554 -07 000000576 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:22:05.554 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.839 mm, average velocity = 2.108 mm/sec
17-03-18 03:22:06.504 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:06.504 -07 000000430 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:22:06.514 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:06.514 -07 000000576 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:06.534 -07 000000576 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:22:06.534 -07 000000576 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:22:06.534 -07 000000576 INF: Y Motor: Moved to 70.6885 after 1448 ms (table move)
17-03-18 03:22:06.544 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129645 mm (DAC = 28321)
17-03-18 03:22:06.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.544 -07 000000629 INF: FPGA: Recv ZSGSRD 29473
17-03-18 03:22:06.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:22:06.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.554 -07 000000569 INF: FPGA: Recv ZSGSRD 29468
17-03-18 03:22:06.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.564 -07 000000430 INF: FPGA: Recv ZSGSRD 29468
17-03-18 03:22:06.564 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:22:06.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:22:06.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.574 -07 000000455 INF: FPGA: Recv ZSGSRD 29475
17-03-18 03:22:06.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.584 -07 000000591 INF: FPGA: Recv ZSGSRD 29469
17-03-18 03:22:06.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.594 -07 000000461 INF: FPGA: Recv ZSGSRD 29471
17-03-18 03:22:06.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.604 -07 000000444 INF: FPGA: Recv ZSGSRD 29467
17-03-18 03:22:06.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.614 -07 000000590 INF: FPGA: Recv ZSGSRD 29465
17-03-18 03:22:06.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.624 -07 000000606 INF: FPGA: Recv ZSGSRD 29475
17-03-18 03:22:06.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.634 -07 000000512 INF: FPGA: Recv ZSGSRD 29473
17-03-18 03:22:06.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:06.644 -07 000000461 INF: FPGA: Recv ZPIEZORD 24994
17-03-18 03:22:06.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.654 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.322 V. Piezo Error = -9.8 V.
17-03-18 03:22:06.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.6 um, Read 10 ADC samples: Avg = 29470 (-128.9 uncal um), Error = 0.8 uncal um, Median = 29470 (-128.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29465 (-128.8 uncal um), Max = 29475 (-128.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:22:06.654 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29470, posNoise = 5, negNoise = 5
17-03-18 03:22:06.654 -07 000000610 INF: Z Motor: After move to -0.129645, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:06.654 -07 000000610 INF: Z Motor: Settle wait time = 1450 ms, measure time = 109 ms (allowed 150 ms), total time = 1559 ms
17-03-18 03:22:06.654 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:22:06.704 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-18 03:22:06.704 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:22:06.704 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.12964488382883. ----------
17-03-18 03:22:06.704 -07 000000610 INF: Cycle	111	Tile	14	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:22:06.704 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28144, sync = True, waitForSettling = True)
17-03-18 03:22:06.704 -07 000000610 INF: Z Motor: Moving to -0.128835 mm, started at -0.129645 mm, distance = 0.81 um
17-03-18 03:22:06.704 -07 000000610 INF: FPGA: Xmit ZDACW 28144\n [Z Motor]
17-03-18 03:22:06.704 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:22:06.714 -07 000000610 INF: FPGA: 'ZDACW 28144' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:22:06.714 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:06.714 -07 000000462 INF: FPGA: Recv ZDACR 28144
17-03-18 03:22:06.724 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.724 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:22:06.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.874 -07 000000629 INF: FPGA: Recv ZSGSRD 29347
17-03-18 03:22:06.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:06.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.884 -07 000000561 INF: FPGA: Recv ZSGSRD 29344
17-03-18 03:22:06.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.894 -07 000000579 INF: FPGA: Recv ZSGSRD 29343
17-03-18 03:22:06.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.904 -07 000000569 INF: FPGA: Recv ZSGSRD 29351
17-03-18 03:22:06.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.914 -07 000000430 INF: FPGA: Recv ZSGSRD 29349
17-03-18 03:22:06.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.924 -07 000000461 INF: FPGA: Recv ZSGSRD 29340
17-03-18 03:22:06.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.934 -07 000000501 INF: FPGA: Recv ZSGSRD 29342
17-03-18 03:22:06.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.944 -07 000000590 INF: FPGA: Recv ZSGSRD 29346
17-03-18 03:22:06.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.954 -07 000000467 INF: FPGA: Recv ZSGSRD 29349
17-03-18 03:22:06.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:06.964 -07 000000591 INF: FPGA: Recv ZSGSRD 29345
17-03-18 03:22:06.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.974 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:06.974 -07 000000618 INF: FPGA: Recv ZPIEZORD 24848
17-03-18 03:22:06.984 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:06.984 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.294 V. Piezo Error = -9.9 V.
17-03-18 03:22:06.984 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29346 (-128.1 uncal um), Error = 0.8 uncal um, Median = 29346 (-128.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29340 (-128.0 uncal um), Max = 29351 (-128.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:22:06.984 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29346, posNoise = 5, negNoise = 6
17-03-18 03:22:06.984 -07 000000610 INF: Z Motor: After move to -0.128835, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:06.984 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:22:06.984 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:22:06.984 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:22:06.984 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:22:06.984 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:22:06.984 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:22:06.984 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:22:06.984 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:22:06.984 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:22:06.984 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:22:06.984 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:22:06.984 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:22:06.984 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:22:06.984 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:22:06.984 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:22:06.994 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:22:06.994 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:22:06.994 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:22:06.994 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:22:07.004 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:22:07.004 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:22:07.004 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28321 150\n [Camera]
17-03-18 03:22:07.204 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:22:07.604 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:22:07.604 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:22:07.604 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:07.614 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:22:07.614 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:22:07.614 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:07.614 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:07.614 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 03:22:07.614 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:07.614 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 03:22:07.804 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28321 789
17-03-18 03:22:07.954 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:22:07.984 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:22:07.984 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-18 03:22:07.984 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:07.984 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:22:07.984 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:22:07.984 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:07.994 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:22:07.994 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:22:07.994 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:22:08.004 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:22:08.144 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:22:08.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:22:08.144 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:08.144 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:08.144 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:22:08.144 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:22:08.144 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:22:08.144 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:08.144 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:08.144 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:22:08.334 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:22:08.344 -07 000000629 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:22:08.344 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28321 150' command took 2 ms to send, 1330 ms to get response, and 1336 ms overall
17-03-18 03:22:08.344 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.129492
17-03-18 03:22:08.344 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.12949 mm
17-03-18 03:22:08.344 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:22:08.344 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:22:08.344 -07 000000502 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 03:22:08.344 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 28287, sync = True, waitForSettling = False)
17-03-18 03:22:08.344 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:08.344 -07 000000590 INF: Z Motor: Moving to -0.129490 mm, started at -0.128848 mm, distance = -0.64 um
17-03-18 03:22:08.344 -07 000000424 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:22:08.354 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:22:08.354 -07 000000502 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:08.354 -07 000000502 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:22:08.354 -07 000000502 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:22:08.354 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:22:08.364 -07 000000590 INF: FPGA: Xmit ZDACW 28287\n [Z Motor]
17-03-18 03:22:08.364 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:22:08.374 -07 000000590 INF: FPGA: 'ZDACW 28287' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 03:22:08.374 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:08.374 -07 000000561 INF: FPGA: Recv ZDACR 28287
17-03-18 03:22:08.384 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:08.384 -07 000000590 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-18 03:22:08.544 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 393 ms.
17-03-18 03:22:08.544 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:22:08.544 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:08.544 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:22:08.544 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 03:22:08.554 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 03:22:08.554 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:22:08.554 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:08.554 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:22:08.564 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 417 ms.
17-03-18 03:22:08.734 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:22:08.734 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 381 ms overall
17-03-18 03:22:08.774 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:08.784 -07 000000424 INF: FPGA: Recv YRDPOS 146470
17-03-18 03:22:08.784 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:22:08.784 -07 000000502 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:08.784 -07 000000502 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:22:08.784 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.844 mm, average velocity = 2.216 mm/sec
17-03-18 03:22:09.364 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.983999,
17-03-18 03:22:09.734 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:09.734 -07 000000444 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:22:09.744 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:09.744 -07 000000502 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:09.774 -07 000000502 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:22:09.774 -07 000000502 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:22:09.774 -07 000000502 INF: Y Motor: Moved to 71.5190 after 1425 ms (table move)
17-03-18 03:22:09.774 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129490 mm (DAC = 28287)
17-03-18 03:22:09.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:09.774 -07 000000462 INF: FPGA: Recv ZSGSRD 29451
17-03-18 03:22:09.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:22:09.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:09.784 -07 000000591 INF: FPGA: Recv ZSGSRD 29445
17-03-18 03:22:09.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:09.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:09.794 -07 000000629 INF: FPGA: Recv ZSGSRD 29448
17-03-18 03:22:09.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:09.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:09.804 -07 000000576 INF: FPGA: Recv ZSGSRD 29446
17-03-18 03:22:09.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:09.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:09.814 -07 000000502 INF: FPGA: Recv ZSGSRD 29448
17-03-18 03:22:09.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:09.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:09.824 -07 000000462 INF: FPGA: Recv ZSGSRD 29451
17-03-18 03:22:09.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:09.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:09.834 -07 000000591 INF: FPGA: Recv ZSGSRD 29449
17-03-18 03:22:09.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:09.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:09.844 -07 000000501 INF: FPGA: Recv ZSGSRD 29441
17-03-18 03:22:09.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:09.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:09.854 -07 000000626 INF: FPGA: Recv ZSGSRD 29445
17-03-18 03:22:09.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:09.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:09.864 -07 000000467 INF: FPGA: Recv ZSGSRD 29449
17-03-18 03:22:09.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:09.874 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:09.874 -07 000000618 INF: FPGA: Recv ZPIEZORD 25027
17-03-18 03:22:09.884 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:09.884 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.316 V. Piezo Error = -9.7 V.
17-03-18 03:22:09.884 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.5 um, Read 10 ADC samples: Avg = 29447 (-128.7 uncal um), Error = 0.8 uncal um, Median = 29448 (-128.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29441 (-128.7 uncal um), Max = 29451 (-128.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:22:09.884 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29447, posNoise = 4, negNoise = 6
17-03-18 03:22:09.884 -07 000000610 INF: Z Motor: After move to -0.129490, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:09.884 -07 000000610 INF: Z Motor: Settle wait time = 1427 ms, measure time = 107 ms (allowed 150 ms), total time = 1534 ms
17-03-18 03:22:09.884 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:22:09.934 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1586 ms
17-03-18 03:22:09.934 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:22:09.934 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.12949712694957. ----------
17-03-18 03:22:09.934 -07 000000610 INF: Cycle	111	Tile	15	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:22:09.934 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28111, sync = True, waitForSettling = True)
17-03-18 03:22:09.934 -07 000000610 INF: Z Motor: Moving to -0.128684 mm, started at -0.129497 mm, distance = 0.81 um
17-03-18 03:22:09.934 -07 000000610 INF: FPGA: Xmit ZDACW 28111\n [Z Motor]
17-03-18 03:22:09.934 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:22:09.944 -07 000000610 INF: FPGA: 'ZDACW 28111' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:22:09.944 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:09.944 -07 000000561 INF: FPGA: Recv ZDACR 28111
17-03-18 03:22:09.954 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:09.954 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:22:10.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:10.104 -07 000000462 INF: FPGA: Recv ZSGSRD 29324
17-03-18 03:22:10.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:10.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:10.114 -07 000000424 INF: FPGA: Recv ZSGSRD 29326
17-03-18 03:22:10.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:10.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:10.124 -07 000000501 INF: FPGA: Recv ZSGSRD 29319
17-03-18 03:22:10.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:10.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:10.134 -07 000000569 INF: FPGA: Recv ZSGSRD 29319
17-03-18 03:22:10.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:10.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:10.144 -07 000000561 INF: FPGA: Recv ZSGSRD 29321
17-03-18 03:22:10.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:10.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:10.154 -07 000000462 INF: FPGA: Recv ZSGSRD 29323
17-03-18 03:22:10.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:10.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:10.164 -07 000000467 INF: FPGA: Recv ZSGSRD 29315
17-03-18 03:22:10.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:10.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:10.174 -07 000000455 INF: FPGA: Recv ZSGSRD 29320
17-03-18 03:22:10.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:10.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:10.184 -07 000000591 INF: FPGA: Recv ZSGSRD 29323
17-03-18 03:22:10.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:10.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:10.194 -07 000000502 INF: FPGA: Recv ZSGSRD 29326
17-03-18 03:22:10.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:10.204 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:10.204 -07 000000462 INF: FPGA: Recv ZPIEZORD 24840
17-03-18 03:22:10.214 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:10.214 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.289 V. Piezo Error = -9.8 V.
17-03-18 03:22:10.214 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.7 um, Read 10 ADC samples: Avg = 29322 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29322 (-127.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29315 (-127.9 uncal um), Max = 29326 (-127.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:22:10.214 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29322, posNoise = 4, negNoise = 7
17-03-18 03:22:10.214 -07 000000610 INF: Z Motor: After move to -0.128684, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:10.214 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:22:10.214 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:22:10.214 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:22:10.214 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:22:10.214 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:22:10.214 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:22:10.214 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:22:10.214 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:22:10.214 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:22:10.214 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:22:10.214 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:22:10.214 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:22:10.214 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:22:10.224 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:22:10.224 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:22:10.224 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:22:10.224 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:22:10.234 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:22:10.234 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:22:10.234 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:22:10.234 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:22:10.244 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28287 150\n [Camera]
17-03-18 03:22:10.444 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:22:10.844 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:22:10.844 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:22:10.844 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:10.844 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:10.844 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:22:10.844 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:22:10.844 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:22:10.844 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:10.844 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:10.844 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:22:11.034 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28287 789
17-03-18 03:22:11.184 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:22:11.224 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:22:11.224 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:22:11.224 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:11.224 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:22:11.224 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:22:11.224 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:11.224 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:22:11.224 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:22:11.224 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:22:11.234 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:22:11.384 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1136
17-03-18 03:22:11.384 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1136
17-03-18 03:22:11.384 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:11.384 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:11.384 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:22:11.384 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1136
17-03-18 03:22:11.384 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1136
17-03-18 03:22:11.384 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:11.384 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:11.384 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:22:11.564 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:22:11.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:22:11.574 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:22:11.574 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:22:11.574 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28287 150' command took 2 ms to send, 1323 ms to get response, and 1332 ms overall
17-03-18 03:22:11.574 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:22:11.574 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51904296875, Z-Position -0.12869410043185. ------
17-03-18 03:22:11.574 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:22:11.574 -07 000000461 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.13502 mm
17-03-18 03:22:11.574 -07 000000461 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:22:11.584 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 29496, sync = True, waitForSettling = False)
17-03-18 03:22:11.584 -07 000000629 INF: Z Motor: Moving to -0.135024 mm, started at -0.128694 mm, distance = -6.33 um
17-03-18 03:22:11.584 -07 000000629 INF: FPGA: Xmit ZDACW 29496\n [Z Motor]
17-03-18 03:22:11.584 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:22:11.584 -07 000000430 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-18 03:22:11.584 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:22:11.584 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:22:11.584 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 4 ms to get response, and 6 ms overall
17-03-18 03:22:11.594 -07 000000629 INF: FPGA: 'ZDACW 29496' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:11.594 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:11.594 -07 000000576 INF: FPGA: Recv ZDACR 29496
17-03-18 03:22:11.604 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:11.604 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:11.604 -07 000000629 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-18 03:22:11.604 -07 000000501 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:22:11.614 -07 000000606 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:22:11.614 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:22:11.614 -07 000000430 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:11.614 -07 000000430 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:22:11.614 -07 000000430 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:22:11.624 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:22:11.764 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:22:11.764 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:22:11.764 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:11.764 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:22:11.764 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:22:11.764 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:11.774 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:22:11.774 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:22:11.774 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:22:11.774 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:22:11.814 -07 000000561 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:22:11.814 -07 000000606 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 227 ms overall
17-03-18 03:22:11.994 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 03:22:11.994 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:22:12.054 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:12.054 -07 000000591 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:22:12.064 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:22:12.064 -07 000000430 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:12.064 -07 000000430 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 03:22:12.064 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.174 mm/sec
17-03-18 03:22:13.014 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:13.014 -07 000000462 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:22:13.024 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:13.024 -07 000000430 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:13.044 -07 000000430 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:22:13.044 -07 000000430 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:22:13.044 -07 000000430 INF: Y Motor: Moved to 72.3496 after 1468 ms (table move)
17-03-18 03:22:13.054 -07 000000461 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135024 mm (DAC = 29496)
17-03-18 03:22:13.054 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:13.054 -07 000000590 INF: FPGA: Recv ZSGSRD 30313
17-03-18 03:22:13.064 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:22:13.064 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:13.064 -07 000000462 INF: FPGA: Recv ZSGSRD 30309
17-03-18 03:22:13.074 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:13.074 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:13.074 -07 000000606 INF: FPGA: Recv ZSGSRD 30308
17-03-18 03:22:13.084 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:13.084 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:13.084 -07 000000569 INF: FPGA: Recv ZSGSRD 30308
17-03-18 03:22:13.094 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:13.094 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:13.094 -07 000000576 INF: FPGA: Recv ZSGSRD 30312
17-03-18 03:22:13.104 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:13.104 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:13.104 -07 000000424 INF: FPGA: Recv ZSGSRD 30308
17-03-18 03:22:13.114 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:13.114 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:13.114 -07 000000462 INF: FPGA: Recv ZSGSRD 30307
17-03-18 03:22:13.124 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:13.124 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:13.124 -07 000000629 INF: FPGA: Recv ZSGSRD 30302
17-03-18 03:22:13.134 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:13.134 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:13.134 -07 000000590 INF: FPGA: Recv ZSGSRD 30317
17-03-18 03:22:13.144 -07 000000461 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:13.144 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:13.144 -07 000000579 INF: FPGA: Recv ZSGSRD 30314
17-03-18 03:22:13.154 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:13.154 -07 000000461 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:13.154 -07 000000626 INF: FPGA: Recv ZPIEZORD 26151
17-03-18 03:22:13.164 -07 000000461 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:13.164 -07 000000461 INF: Z Motor: Piezo is near 35.9 V (nominally 0 to 100 V), expect near 45.0 V, since DAC is at 4.501 V. Piezo Error = -9.1 V.
17-03-18 03:22:13.164 -07 000000461 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.0 um, Read 10 ADC samples: Avg = 30310 (-134.3 uncal um), Error = 0.8 uncal um, Median = 30308 (-134.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30302 (-134.2 uncal um), Max = 30317 (-134.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:22:13.164 -07 000000461 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30310, posNoise = 7, negNoise = 8
17-03-18 03:22:13.164 -07 000000461 INF: Z Motor: After move to -0.135024, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:13.164 -07 000000461 INF: Z Motor: Settle wait time = 1472 ms, measure time = 107 ms (allowed 150 ms), total time = 1579 ms
17-03-18 03:22:13.164 -07 000000461 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:22:13.214 -07 000000461 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1631 ms
17-03-18 03:22:13.214 -07 000000461 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:22:13.214 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:22:13.214 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:22:13.214 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:22:13.214 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:22:13.214 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:22:13.214 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:22:13.214 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:22:13.214 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:22:13.224 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:22:13.224 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:22:13.234 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 03:22:13.234 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-18 03:22:13.234 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:22:13.284 -07 000000467 INF: FPGA: Recv @CAMSNAP turning led on 41
17-03-18 03:22:13.584 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 341
17-03-18 03:22:13.584 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 341
17-03-18 03:22:13.584 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:22:13.584 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) start.
17-03-18 03:22:13.624 -07 000000501 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:22:13.624 -07 000000462 INF: FPGA: Recv CAMSNAP
17-03-18 03:22:13.624 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 383 ms to get response, and 384 ms overall
17-03-18 03:22:13.714 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:22:13.714 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:13.714 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 03:22:13.714 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 03:22:13.724 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:22:13.724 -07 000000502 INF: Autofocus start
17-03-18 03:22:13.724 -07 000000502 INF: MeasureProfile start
17-03-18 03:22:13.724 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:22:13.734 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:22:13.734 -07 000000569 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:22:13.734 -07 000000502 INF: MeasureProfile done
17-03-18 03:22:13.734 -07 000000502 INF: X=32  Z correction [um]=0.1299841
17-03-18 03:22:13.734 -07 000000502 INF: Autofocus finished
17-03-18 03:22:13.934 -07 000000561 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:22:13.934 -07 000000569 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-18 03:22:13.934 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.13504122202791. ----------
17-03-18 03:22:13.934 -07 000000610 INF: Cycle	111	Tile	16	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:22:13.944 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28037, sync = True, waitForSettling = True)
17-03-18 03:22:13.944 -07 000000610 INF: Z Motor: Moving to -0.128345 mm, started at -0.135041 mm, distance = 6.70 um
17-03-18 03:22:13.944 -07 000000610 INF: FPGA: Xmit ZDACW 28037\n [Z Motor]
17-03-18 03:22:13.944 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:22:13.954 -07 000000610 INF: FPGA: 'ZDACW 28037' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:13.964 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:13.964 -07 000000626 INF: FPGA: Recv ZDACR 28037
17-03-18 03:22:13.974 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:22:13.974 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:22:14.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:14.124 -07 000000502 INF: FPGA: Recv ZSGSRD 29270
17-03-18 03:22:14.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:14.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:14.134 -07 000000430 INF: FPGA: Recv ZSGSRD 29270
17-03-18 03:22:14.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:14.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:14.144 -07 000000579 INF: FPGA: Recv ZSGSRD 29268
17-03-18 03:22:14.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:14.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:14.154 -07 000000461 INF: FPGA: Recv ZSGSRD 29267
17-03-18 03:22:14.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:14.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:14.164 -07 000000512 INF: FPGA: Recv ZSGSRD 29273
17-03-18 03:22:14.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:14.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:14.174 -07 000000501 INF: FPGA: Recv ZSGSRD 29266
17-03-18 03:22:14.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:14.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:14.184 -07 000000569 INF: FPGA: Recv ZSGSRD 29275
17-03-18 03:22:14.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:14.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:14.194 -07 000000629 INF: FPGA: Recv ZSGSRD 29272
17-03-18 03:22:14.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:14.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:14.204 -07 000000561 INF: FPGA: Recv ZSGSRD 29266
17-03-18 03:22:14.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:14.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:14.214 -07 000000461 INF: FPGA: Recv ZSGSRD 29268
17-03-18 03:22:14.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:14.224 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:14.224 -07 000000462 INF: FPGA: Recv ZPIEZORD 24753
17-03-18 03:22:14.234 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:14.234 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.278 V. Piezo Error = -9.9 V.
17-03-18 03:22:14.234 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.3 um, Read 10 ADC samples: Avg = 29270 (-127.6 uncal um), Error = 0.8 uncal um, Median = 29269 (-127.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29266 (-127.6 uncal um), Max = 29275 (-127.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:22:14.234 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29270, posNoise = 5, negNoise = 4
17-03-18 03:22:14.234 -07 000000610 INF: Z Motor: After move to -0.128345, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:14.234 -07 000000610 INF: Z Motor: MoveAbsStepped took 290 ms)
17-03-18 03:22:14.234 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:22:14.234 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:22:14.234 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:22:14.234 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:22:14.234 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:22:14.234 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:22:14.234 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:22:14.234 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:22:14.234 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:22:14.234 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:22:14.234 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:22:14.234 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:22:14.244 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:22:14.244 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:22:14.244 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:22:14.244 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:22:14.254 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:22:14.254 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:22:14.254 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:22:14.254 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:22:14.264 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28214 150\n [Camera]
17-03-18 03:22:14.464 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:22:14.724 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.994908,
17-03-18 03:22:14.864 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:22:14.864 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:22:14.864 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:14.864 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:14.864 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 03:22:14.864 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:22:14.864 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:22:14.864 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:14.864 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:14.864 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 03:22:15.054 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28214 789
17-03-18 03:22:15.204 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:22:15.244 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:22:15.244 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:22:15.244 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:15.244 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:22:15.244 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:22:15.244 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:15.244 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:22:15.244 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:22:15.254 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:22:15.254 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:22:15.404 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:22:15.404 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:22:15.404 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:15.404 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:15.404 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-18 03:22:15.404 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:22:15.404 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:22:15.404 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:15.404 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:15.404 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-18 03:22:15.594 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:22:15.594 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:22:15.594 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28214 150' command took 2 ms to send, 1323 ms to get response, and 1333 ms overall
17-03-18 03:22:15.594 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.128910
17-03-18 03:22:15.594 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.12891 mm
17-03-18 03:22:15.594 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:22:15.594 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:22:15.594 -07 000000502 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 03:22:15.594 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:15.594 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 28160, sync = True, waitForSettling = False)
17-03-18 03:22:15.594 -07 000000430 INF: Z Motor: Moving to -0.128908 mm, started at -0.128360 mm, distance = -0.55 um
17-03-18 03:22:15.604 -07 000000424 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:22:15.604 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:22:15.604 -07 000000502 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:15.604 -07 000000502 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:22:15.604 -07 000000502 INF: Y Motor: Moving 1349 steps-27
17-03-18 03:22:15.604 -07 000000430 INF: FPGA: Xmit ZDACW 28160\n [Z Motor]
17-03-18 03:22:15.604 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:22:15.614 -07 000000430 INF: FPGA: 'ZDACW 28160' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:22:15.614 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:15.614 -07 000000467 INF: FPGA: Recv ZDACR 28160
17-03-18 03:22:15.624 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:22:15.624 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:15.624 -07 000000430 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:22:15.784 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:22:15.784 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:22:15.784 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:15.794 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:22:15.794 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:22:15.794 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:15.794 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:22:15.794 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:22:15.794 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:22:15.804 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:22:15.994 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:22:15.994 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:22:16.044 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:16.044 -07 000000629 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:22:16.054 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:22:16.054 -07 000000502 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:16.054 -07 000000502 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 03:22:16.054 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.123 mm/sec
17-03-18 03:22:16.564 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:22:16.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:22:17.004 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:17.004 -07 000000618 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:22:17.014 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:17.014 -07 000000502 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:17.034 -07 000000502 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:22:17.034 -07 000000502 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:22:17.034 -07 000000502 INF: Y Motor: Moved to 73.1763 after 1441 ms (table move)
17-03-18 03:22:17.044 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128908 mm (DAC = 28160)
17-03-18 03:22:17.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.044 -07 000000461 INF: FPGA: Recv ZSGSRD 29361
17-03-18 03:22:17.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:22:17.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.054 -07 000000462 INF: FPGA: Recv ZSGSRD 29352
17-03-18 03:22:17.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.064 -07 000000461 INF: FPGA: Recv ZSGSRD 29358
17-03-18 03:22:17.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.074 -07 000000561 INF: FPGA: Recv ZSGSRD 29361
17-03-18 03:22:17.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.084 -07 000000576 INF: FPGA: Recv ZSGSRD 29360
17-03-18 03:22:17.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.094 -07 000000444 INF: FPGA: Recv ZSGSRD 29362
17-03-18 03:22:17.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.104 -07 000000501 INF: FPGA: Recv ZSGSRD 29359
17-03-18 03:22:17.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.114 -07 000000579 INF: FPGA: Recv ZSGSRD 29353
17-03-18 03:22:17.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.124 -07 000000462 INF: FPGA: Recv ZSGSRD 29353
17-03-18 03:22:17.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.134 -07 000000461 INF: FPGA: Recv ZSGSRD 29353
17-03-18 03:22:17.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.144 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:17.144 -07 000000606 INF: FPGA: Recv ZPIEZORD 24921
17-03-18 03:22:17.154 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.154 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.297 V. Piezo Error = -9.7 V.
17-03-18 03:22:17.154 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.9 um, Read 10 ADC samples: Avg = 29357 (-128.1 uncal um), Error = 0.8 uncal um, Median = 29358 (-128.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29352 (-128.1 uncal um), Max = 29362 (-128.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:22:17.154 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29357, posNoise = 5, negNoise = 5
17-03-18 03:22:17.154 -07 000000610 INF: Z Motor: After move to -0.128908, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:17.154 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 107 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:22:17.154 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:22:17.204 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 03:22:17.204 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:22:17.204 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.128918947856811. ----------
17-03-18 03:22:17.204 -07 000000610 INF: Cycle	111	Tile	17	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:22:17.204 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27984, sync = True, waitForSettling = True)
17-03-18 03:22:17.204 -07 000000610 INF: Z Motor: Moving to -0.128103 mm, started at -0.128919 mm, distance = 0.82 um
17-03-18 03:22:17.204 -07 000000610 INF: FPGA: Xmit ZDACW 27984\n [Z Motor]
17-03-18 03:22:17.204 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:22:17.214 -07 000000610 INF: FPGA: 'ZDACW 27984' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:22:17.214 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:17.214 -07 000000512 INF: FPGA: Recv ZDACR 27984
17-03-18 03:22:17.224 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.224 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:22:17.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.374 -07 000000626 INF: FPGA: Recv ZSGSRD 29233
17-03-18 03:22:17.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:17.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.384 -07 000000461 INF: FPGA: Recv ZSGSRD 29231
17-03-18 03:22:17.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.394 -07 000000467 INF: FPGA: Recv ZSGSRD 29232
17-03-18 03:22:17.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.404 -07 000000629 INF: FPGA: Recv ZSGSRD 29236
17-03-18 03:22:17.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.414 -07 000000502 INF: FPGA: Recv ZSGSRD 29232
17-03-18 03:22:17.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.424 -07 000000618 INF: FPGA: Recv ZSGSRD 29232
17-03-18 03:22:17.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.434 -07 000000591 INF: FPGA: Recv ZSGSRD 29228
17-03-18 03:22:17.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.444 -07 000000569 INF: FPGA: Recv ZSGSRD 29227
17-03-18 03:22:17.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.454 -07 000000561 INF: FPGA: Recv ZSGSRD 29235
17-03-18 03:22:17.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:17.464 -07 000000501 INF: FPGA: Recv ZSGSRD 29229
17-03-18 03:22:17.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.474 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:17.474 -07 000000618 INF: FPGA: Recv ZPIEZORD 24746
17-03-18 03:22:17.484 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:17.484 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.270 V. Piezo Error = -9.8 V.
17-03-18 03:22:17.484 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.1 um, Read 10 ADC samples: Avg = 29232 (-127.3 uncal um), Error = 0.8 uncal um, Median = 29232 (-127.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29227 (-127.3 uncal um), Max = 29236 (-127.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:22:17.484 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29232, posNoise = 4, negNoise = 5
17-03-18 03:22:17.484 -07 000000610 INF: Z Motor: After move to -0.128103, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:17.484 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:22:17.484 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:22:17.484 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:22:17.484 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:22:17.484 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:22:17.484 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:22:17.484 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:22:17.484 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:22:17.484 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:22:17.484 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:22:17.484 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:22:17.484 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:22:17.484 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:22:17.494 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:22:17.494 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:22:17.494 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:22:17.494 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:22:17.504 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:22:17.504 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:22:17.504 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:22:17.504 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:22:17.504 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28160 150\n [Camera]
17-03-18 03:22:17.704 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:22:18.114 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:22:18.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:22:18.114 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:18.114 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:18.114 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-18 03:22:18.114 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:22:18.114 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:22:18.114 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:18.114 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:18.114 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-18 03:22:18.304 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28160 789
17-03-18 03:22:18.454 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:22:18.494 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:22:18.494 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:22:18.494 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:18.494 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:22:18.494 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:22:18.494 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:18.494 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:22:18.494 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:22:18.494 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:22:18.504 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:22:18.654 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:22:18.654 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:22:18.654 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:18.654 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:18.654 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-18 03:22:18.654 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:22:18.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:22:18.654 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:18.654 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:18.654 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-18 03:22:18.844 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:22:18.844 -07 000000461 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:22:18.844 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28160 150' command took 2 ms to send, 1322 ms to get response, and 1332 ms overall
17-03-18 03:22:18.844 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128455
17-03-18 03:22:18.844 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12845 mm
17-03-18 03:22:18.844 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:22:18.844 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:22:18.844 -07 000000579 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-18 03:22:18.844 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:18.844 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 28061, sync = True, waitForSettling = False)
17-03-18 03:22:18.844 -07 000000569 INF: Z Motor: Moving to -0.128455 mm, started at -0.128116 mm, distance = -0.34 um
17-03-18 03:22:18.854 -07 000000606 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:22:18.854 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:22:18.854 -07 000000579 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:18.854 -07 000000579 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:22:18.854 -07 000000579 INF: Y Motor: Moving 1354 steps-33
17-03-18 03:22:18.854 -07 000000569 INF: FPGA: Xmit ZDACW 28061\n [Z Motor]
17-03-18 03:22:18.854 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:22:18.864 -07 000000569 INF: FPGA: 'ZDACW 28061' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:22:18.864 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:22:18.874 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:18.874 -07 000000501 INF: FPGA: Recv ZDACR 28061
17-03-18 03:22:18.884 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:22:18.884 -07 000000569 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:22:19.034 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:22:19.034 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:22:19.034 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:19.034 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:22:19.034 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:22:19.034 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:19.044 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:22:19.044 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:22:19.044 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:22:19.044 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:22:19.234 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 03:22:19.244 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 1 ms to send, 369 ms to get response, and 389 ms overall
17-03-18 03:22:19.284 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:19.284 -07 000000467 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:22:19.294 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:19.294 -07 000000579 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:19.294 -07 000000579 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:22:19.294 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.846 mm, average velocity = 2.176 mm/sec
17-03-18 03:22:20.084 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.96762,
17-03-18 03:22:20.244 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:20.244 -07 000000424 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:22:20.254 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:20.254 -07 000000579 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:20.274 -07 000000579 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:22:20.274 -07 000000579 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:22:20.274 -07 000000579 INF: Y Motor: Moved to 74.0083 after 1424 ms (table move)
17-03-18 03:22:20.274 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128455 mm (DAC = 28061)
17-03-18 03:22:20.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.274 -07 000000467 INF: FPGA: Recv ZSGSRD 29292
17-03-18 03:22:20.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:22:20.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.284 -07 000000430 INF: FPGA: Recv ZSGSRD 29283
17-03-18 03:22:20.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.294 -07 000000455 INF: FPGA: Recv ZSGSRD 29288
17-03-18 03:22:20.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.304 -07 000000576 INF: FPGA: Recv ZSGSRD 29283
17-03-18 03:22:20.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.314 -07 000000461 INF: FPGA: Recv ZSGSRD 29277
17-03-18 03:22:20.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.324 -07 000000561 INF: FPGA: Recv ZSGSRD 29286
17-03-18 03:22:20.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.334 -07 000000444 INF: FPGA: Recv ZSGSRD 29282
17-03-18 03:22:20.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.344 -07 000000618 INF: FPGA: Recv ZSGSRD 29283
17-03-18 03:22:20.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.354 -07 000000569 INF: FPGA: Recv ZSGSRD 29287
17-03-18 03:22:20.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.364 -07 000000590 INF: FPGA: Recv ZSGSRD 29289
17-03-18 03:22:20.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.374 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:20.374 -07 000000629 INF: FPGA: Recv ZPIEZORD 24826
17-03-18 03:22:20.384 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.384 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.282 V. Piezo Error = -9.8 V.
17-03-18 03:22:20.384 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.5 um, Read 10 ADC samples: Avg = 29285 (-127.7 uncal um), Error = 0.8 uncal um, Median = 29284 (-127.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29277 (-127.6 uncal um), Max = 29292 (-127.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:22:20.384 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29285, posNoise = 7, negNoise = 8
17-03-18 03:22:20.384 -07 000000610 INF: Z Motor: After move to -0.128455, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:20.384 -07 000000610 INF: Z Motor: Settle wait time = 1426 ms, measure time = 107 ms (allowed 150 ms), total time = 1533 ms
17-03-18 03:22:20.384 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:22:20.434 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-18 03:22:20.434 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:22:20.434 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.128456404582605. ----------
17-03-18 03:22:20.434 -07 000000610 INF: Cycle	111	Tile	18	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:22:20.434 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27884, sync = True, waitForSettling = True)
17-03-18 03:22:20.434 -07 000000610 INF: Z Motor: Moving to -0.127645 mm, started at -0.128456 mm, distance = 0.81 um
17-03-18 03:22:20.434 -07 000000610 INF: FPGA: Xmit ZDACW 27884\n [Z Motor]
17-03-18 03:22:20.434 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:22:20.444 -07 000000610 INF: FPGA: 'ZDACW 27884' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:22:20.444 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:20.444 -07 000000467 INF: FPGA: Recv ZDACR 27884
17-03-18 03:22:20.454 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.454 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:22:20.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.604 -07 000000606 INF: FPGA: Recv ZSGSRD 29162
17-03-18 03:22:20.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:20.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.614 -07 000000618 INF: FPGA: Recv ZSGSRD 29165
17-03-18 03:22:20.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.624 -07 000000430 INF: FPGA: Recv ZSGSRD 29159
17-03-18 03:22:20.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.634 -07 000000579 INF: FPGA: Recv ZSGSRD 29161
17-03-18 03:22:20.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.644 -07 000000502 INF: FPGA: Recv ZSGSRD 29159
17-03-18 03:22:20.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.654 -07 000000561 INF: FPGA: Recv ZSGSRD 29158
17-03-18 03:22:20.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.664 -07 000000590 INF: FPGA: Recv ZSGSRD 29158
17-03-18 03:22:20.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.674 -07 000000467 INF: FPGA: Recv ZSGSRD 29160
17-03-18 03:22:20.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.684 -07 000000444 INF: FPGA: Recv ZSGSRD 29156
17-03-18 03:22:20.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:20.694 -07 000000455 INF: FPGA: Recv ZSGSRD 29165
17-03-18 03:22:20.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.704 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:20.704 -07 000000576 INF: FPGA: Recv ZPIEZORD 24679
17-03-18 03:22:20.714 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:20.714 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.255 V. Piezo Error = -9.8 V.
17-03-18 03:22:20.714 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.6 um, Read 10 ADC samples: Avg = 29160 (-126.9 uncal um), Error = 0.8 uncal um, Median = 29160 (-126.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29156 (-126.9 uncal um), Max = 29165 (-126.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:22:20.714 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29160, posNoise = 5, negNoise = 4
17-03-18 03:22:20.714 -07 000000610 INF: Z Motor: After move to -0.127645, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:20.714 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:22:20.714 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:22:20.714 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:22:20.714 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:22:20.714 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:22:20.714 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:22:20.714 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:22:20.714 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:22:20.714 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:22:20.714 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:22:20.714 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:22:20.714 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:22:20.714 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:22:20.714 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:22:20.714 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:22:20.724 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:22:20.724 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:22:20.734 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:22:20.734 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:22:20.734 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 17 ms.
17-03-18 03:22:20.734 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:22:20.734 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 28061 150\n [Camera]
17-03-18 03:22:20.934 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:22:21.344 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:22:21.344 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:22:21.344 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:21.344 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:21.344 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-18 03:22:21.344 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:22:21.344 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:22:21.344 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:21.344 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:21.344 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start.
17-03-18 03:22:21.534 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28061 790
17-03-18 03:22:21.564 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:22:21.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 110. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:22:21.684 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:22:21.744 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 03:22:21.744 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:22:21.744 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:21.744 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 03:22:21.744 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:22:21.744 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:21.744 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:22:21.744 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 03:22:21.744 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:22:21.754 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-18 03:22:21.884 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:22:21.884 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:22:21.884 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:21.884 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:21.884 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start.
17-03-18 03:22:21.884 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:22:21.884 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:22:21.884 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:21.884 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:21.884 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start.
17-03-18 03:22:22.074 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:22:22.074 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:22:22.074 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 28061 150' command took 2 ms to send, 1322 ms to get response, and 1332 ms overall
17-03-18 03:22:22.074 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.127653
17-03-18 03:22:22.074 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12765 mm
17-03-18 03:22:22.074 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:22:22.074 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:22:22.074 -07 000000591 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 03:22:22.074 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:22.074 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 27886, sync = True, waitForSettling = False)
17-03-18 03:22:22.084 -07 000000461 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:22:22.084 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:22:22.084 -07 000000591 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:22.084 -07 000000591 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:22:22.084 -07 000000591 INF: Y Motor: Moving 1351 steps-30
17-03-18 03:22:22.084 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:22:22.264 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:22:22.264 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:22:22.264 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:22.264 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:22:22.264 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:22:22.264 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:22.264 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:22:22.264 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:22:22.264 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:22:22.274 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:22:22.464 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 03:22:22.464 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 378 ms overall
17-03-18 03:22:22.494 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:22.494 -07 000000430 INF: FPGA: Recv YRDPOS 153255
17-03-18 03:22:22.504 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:22:22.504 -07 000000591 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:22.504 -07 000000591 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-18 03:22:22.504 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.234 mm/sec
17-03-18 03:22:23.454 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:23.454 -07 000000579 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:22:23.464 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:23.464 -07 000000591 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:23.474 -07 000000591 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:22:23.474 -07 000000591 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:22:23.474 -07 000000591 INF: Y Motor: Moved to 74.8320 after 1400 ms (table move)
17-03-18 03:22:23.484 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.127654 mm (DAC = 27886)
17-03-18 03:22:23.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.484 -07 000000629 INF: FPGA: Recv ZSGSRD 29288
17-03-18 03:22:23.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:22:23.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.494 -07 000000462 INF: FPGA: Recv ZSGSRD 29287
17-03-18 03:22:23.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.504 -07 000000606 INF: FPGA: Recv ZSGSRD 29292
17-03-18 03:22:23.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.514 -07 000000461 INF: FPGA: Recv ZSGSRD 29287
17-03-18 03:22:23.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.524 -07 000000591 INF: FPGA: Recv ZSGSRD 29291
17-03-18 03:22:23.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.534 -07 000000502 INF: FPGA: Recv ZSGSRD 29279
17-03-18 03:22:23.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.544 -07 000000462 INF: FPGA: Recv ZSGSRD 29283
17-03-18 03:22:23.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.554 -07 000000424 INF: FPGA: Recv ZSGSRD 29283
17-03-18 03:22:23.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.564 -07 000000430 INF: FPGA: Recv ZSGSRD 29282
17-03-18 03:22:23.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.574 -07 000000591 INF: FPGA: Recv ZSGSRD 29285
17-03-18 03:22:23.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.584 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:23.584 -07 000000579 INF: FPGA: Recv ZPIEZORD 24858
17-03-18 03:22:23.594 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.594 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.255 V. Piezo Error = -9.4 V.
17-03-18 03:22:23.594 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.6 um, Read 10 ADC samples: Avg = 29286 (-127.7 uncal um), Error = 0.0 uncal um, Median = 29286 (-127.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29279 (-127.6 uncal um), Max = 29292 (-127.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:22:23.594 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29286, posNoise = 6, negNoise = 7
17-03-18 03:22:23.594 -07 000000610 INF: Z Motor: After move to -0.127654, error = -0.000809, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:23.594 -07 000000610 INF: Z Motor: Settle wait time = 3046 ms, measure time = 109 ms (allowed 150 ms), total time = 3155 ms
17-03-18 03:22:23.594 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:22:23.644 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1563 ms
17-03-18 03:22:23.644 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:22:23.644 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.128462828794746. ----------
17-03-18 03:22:23.644 -07 000000610 INF: Cycle	111	Tile	19	Exposure Settings		A	404	G	194	T	194	C	404
17-03-18 03:22:23.644 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27709, sync = True, waitForSettling = True)
17-03-18 03:22:23.644 -07 000000610 INF: Z Motor: Moving to -0.126844 mm, started at -0.128463 mm, distance = 1.62 um
17-03-18 03:22:23.644 -07 000000610 INF: FPGA: Xmit ZDACW 27709\n [Z Motor]
17-03-18 03:22:23.644 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:22:23.654 -07 000000610 INF: FPGA: 'ZDACW 27709' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:22:23.654 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:22:23.654 -07 000000424 INF: FPGA: Recv ZDACR 27709
17-03-18 03:22:23.664 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.664 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:22:23.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.814 -07 000000629 INF: FPGA: Recv ZSGSRD 29038
17-03-18 03:22:23.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.824 -07 000000467 INF: FPGA: Recv ZSGSRD 29038
17-03-18 03:22:23.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.834 -07 000000502 INF: FPGA: Recv ZSGSRD 29027
17-03-18 03:22:23.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.844 -07 000000618 INF: FPGA: Recv ZSGSRD 29036
17-03-18 03:22:23.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.854 -07 000000569 INF: FPGA: Recv ZSGSRD 29037
17-03-18 03:22:23.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.864 -07 000000461 INF: FPGA: Recv ZSGSRD 29032
17-03-18 03:22:23.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.874 -07 000000590 INF: FPGA: Recv ZSGSRD 29029
17-03-18 03:22:23.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.884 -07 000000579 INF: FPGA: Recv ZSGSRD 29029
17-03-18 03:22:23.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.894 -07 000000561 INF: FPGA: Recv ZSGSRD 29032
17-03-18 03:22:23.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:22:23.904 -07 000000501 INF: FPGA: Recv ZSGSRD 29036
17-03-18 03:22:23.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.914 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:22:23.914 -07 000000455 INF: FPGA: Recv ZPIEZORD 24491
17-03-18 03:22:23.924 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:23.924 -07 000000610 INF: Z Motor: Piezo is near 32.3 V (nominally 0 to 100 V), expect near 42.3 V, since DAC is at 4.228 V. Piezo Error = -10.0 V.
17-03-18 03:22:23.924 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.8 um, Read 10 ADC samples: Avg = 29033 (-126.1 uncal um), Error = 0.8 uncal um, Median = 29034 (-126.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29027 (-126.0 uncal um), Max = 29038 (-126.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:22:23.924 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29033, posNoise = 5, negNoise = 6
17-03-18 03:22:23.924 -07 000000610 INF: Z Motor: After move to -0.126844, error = 0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:22:23.924 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:22:23.924 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:22:23.924 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:22:23.924 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:22:23.924 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:22:23.924 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:22:23.924 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:22:23.924 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:22:23.924 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:22:23.924 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:22:23.924 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:22:23.924 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:22:23.924 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:22:23.934 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:22:23.934 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:22:23.934 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:22:23.934 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:22:23.944 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:22:23.944 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:22:23.944 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:22:23.944 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:22:23.954 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 404 404 194 194 27886 150\n [Camera]
17-03-18 03:22:24.154 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:22:24.554 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:22:24.554 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:22:24.554 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:22:24.554 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:24.554 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:22:24.554 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:24.554 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-18 03:22:24.554 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:24.554 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:24.554 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) start.
17-03-18 03:22:24.744 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27886 789
17-03-18 03:22:24.894 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:22:24.944 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) end. Duration was 389 ms.
17-03-18 03:22:24.944 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:22:24.944 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:24.954 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:22:24.954 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:22:24.954 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:24.954 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:22:24.954 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:22:24.954 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:22:24.964 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:22:25.094 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:22:25.094 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:22:25.094 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:22:25.094 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:22:25.094 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) start.
17-03-18 03:22:25.094 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:22:25.094 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:22:25.094 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:22:25.234 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:22:25.234 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 576012080, 0x0, 418435064) start.
17-03-18 03:22:25.284 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:22:25.284 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:22:25.284 -07 000000610 INF: FPGA: 'CAMDBLSNAP 404 404 194 194 27886 150' command took 2 ms to send, 1326 ms to get response, and 1335 ms overall
17-03-18 03:22:25.484 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:22:25.484 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:22:25.484 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:25.484 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:22:25.484 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:22:25.484 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:22:25.534 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:22:25.554 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.983999,
17-03-18 03:22:25.614 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 576012080, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:22:25.614 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:22:25.614 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:22:25.614 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:22:25.624 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 528 ms.
17-03-18 03:22:25.624 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:22:25.664 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms.
17-03-18 03:22:25.674 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-18 03:22:25.674 -07 000000610 INF: Imaging Cycle 111: ScanTilesCommand Cycle 111 time end. Duration was 140160 ms.
17-03-18 03:22:25.674 -07 000000610 INF: =================== Cycle #111 ===================
17-03-18 03:22:25.674 -07 000000610 INF: ===================  ===================
17-03-18 03:22:25.684 -07 000000512 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:22:25.684 -07 000000461 INF: FPGA: Recv EXLED1ADCR 26
17-03-18 03:22:25.694 -07 000000512 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:22:25.694 -07 000000512 INF: GreenLED: Using Green data: Photodiode ADC 26 --> 0.0 mW (old method), or 1.9 mW (new method). Difference = 1.9 mW
17-03-18 03:22:25.694 -07 000000512 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 111, FrontChillerTemperature: 3.983999, FrontChillerHeatSinkTemperature: 0.58657, AmbientTemperature: 18.71888, FlowCellCompartmentTemperature: 21.9809, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.62272, GreenLEDSensorTemperature: 24.77469, PhotodiodePowerAdcGreen: 26, PhotodiodePowerMwGreen: 1.927049
17-03-18 03:22:25.774 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.