17-03-18 03:22:25.834 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:22:25.834 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-18 03:22:25.834 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8320 mm, delta = 0.5485 mm
17-03-18 03:22:25.834 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:25.834 -07 000000424 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:22:25.844 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:22:25.844 -07 000000610 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:25.844 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-18 03:22:25.844 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-18 03:22:25.844 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-18 03:22:25.954 -07 000000576 INF: FPGA: Recv YMVTO 154378 878
17-03-18 03:22:25.954 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 108 ms to get response, and 118 ms overall
17-03-18 03:22:25.954 -07 000000610 INF: Y Motor: Position error before settling = -1 encoder counts (0.000 mm)
17-03-18 03:22:25.954 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.549 mm) should take 877 steps, but required 878 steps (0.549 mm). Slippage = 0.001 mm (0.00%).
17-03-18 03:22:25.954 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 118 ms, distance = 0.549 mm, average velocity = 4.649 mm/sec
17-03-18 03:22:26.564 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:22:26.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:22:28.954 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:22:28.954 -07 000000591 INF: FPGA: Recv YRDPOS 154387
17-03-18 03:22:28.964 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:22:28.964 -07 000000610 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:22:28.984 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.003697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:22:28.984 -07 000000610 INF: Y Motor: Position error after settling = 8 encoder counts (0.004 mm), Delta during settling = 9 counts (0.004 mm)
17-03-18 03:22:28.984 -07 000000610 INF: Y Motor: Moved to 75.3843 after 3156 ms
17-03-18 03:22:28.994 -07 000000610 INF: =================== Cycle #112, Flow Cell Temp 60° ===================
17-03-18 03:22:28.994 -07 000000610 INF: =================== Cycle #112, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-18 03:22:28.994 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-18 03:22:29.004 -07 000000502 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:22:29.004 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:22:29.004 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:22:29.004 -07 000000424 INF: FPGA: Recv TEC2EN 
17-03-18 03:22:29.014 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:22:29.014 -07 000000610 INF: =================== Cycle #112, Flow Cell Temp 60° ===================
17-03-18 03:22:29.014 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:22:29.014 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:22:29.014 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:22:29.044 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:22:29.044 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-18 03:22:29.044 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:22:29.344 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:22:29.364 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:22:29.364 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:22:29.414 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:22:29.434 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:22:29.434 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:22:29.534 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:22:29.534 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:22:29.534 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:22:29.564 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:22:29.564 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:22:29.564 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:22:29.694 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:22:29.734 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:22:30.914 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.977204,
17-03-18 03:22:31.564 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:22:31.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1617, R2=1685, Total=3302. Warn if over 250 bubbles per interval.
17-03-18 03:22:32.864 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:32.894 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:22:33.314 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:33.344 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:22:33.764 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:33.794 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:22:33.794 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:22:33.794 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:22:33.924 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:22:33.954 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:22:33.954 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:22:34.084 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:22:34.114 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:22:34.114 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:22:34.114 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:22:34.244 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:22:34.274 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:22:34.704 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:34.734 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:22:34.734 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:22:34.734 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:22:35.954 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:22:35.954 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-18 03:22:35.954 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:22:35.974 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:22:35.974 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-18 03:22:35.974 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-18 03:22:36.104 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:22:36.124 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-18 03:22:36.124 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-18 03:22:36.174 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:22:36.194 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:22:36.194 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:22:36.274 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.985358,
17-03-18 03:22:36.294 -07 000000610 INF: =================== Cycle #112, Pumping Reagent CMS (4) ===================
17-03-18 03:22:36.294 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:22:36.294 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:22:36.324 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:22:36.324 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:22:36.324 -07 000000610 INF: =================== Cycle #112, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-18 03:22:36.454 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:22:36.494 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:22:36.564 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-18 03:22:36.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1618, R2=1686, Total=3304. Warn if over 250 bubbles per interval.
17-03-18 03:22:37.934 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:37.964 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:22:38.384 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:38.414 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:22:38.414 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:22:38.414 -07 000000610 INF: =================== Cycle #112, Pumping Reagent CMS (4) ===================
17-03-18 03:22:38.544 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:22:38.574 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:22:38.574 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:22:38.704 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:22:38.734 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:22:38.734 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:22:38.734 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:22:38.864 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:22:38.894 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:22:39.324 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:39.354 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:22:39.354 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:22:39.354 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:22:40.574 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:22:40.574 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:22:40.574 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:22:40.594 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:22:40.594 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-18 03:22:40.594 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-18 03:22:40.744 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:22:40.764 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-18 03:22:40.764 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-18 03:22:40.814 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:22:40.834 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:22:40.834 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:22:40.934 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:22:40.934 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:22:40.934 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:22:40.964 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:22:40.964 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:22:40.964 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:22:41.094 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:22:41.134 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:22:41.564 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:22:41.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1618, R2=1686, Total=3304. Warn if over 250 bubbles per interval.
17-03-18 03:22:41.634 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.997626,
17-03-18 03:22:42.004 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:42.034 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:22:42.034 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:22:42.034 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:22:42.164 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:22:42.194 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:22:42.194 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:22:42.324 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:22:42.354 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:22:42.354 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:22:42.354 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:22:42.484 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:22:42.514 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:22:42.944 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:42.974 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:22:42.974 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:22:42.974 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:22:42.974 -07 000000462 INF: WaitCommand(10000) start
17-03-18 03:22:42.974 -07 000000626 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:22:42.974 -07 000000626 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:22:44.194 -07 000000626 INF: AsyncDelayTimer waited 1214ms
17-03-18 03:22:44.194 -07 000000626 INF: LanePump: Xmit /1?\r
17-03-18 03:22:44.224 -07 000000626 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:22:44.224 -07 000000626 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:22:44.354 -07 000000626 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:22:44.394 -07 000000626 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:22:45.924 -07 000000626 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:45.954 -07 000000626 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:22:46.374 -07 000000626 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:46.404 -07 000000626 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:22:46.404 -07 000000626 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:22:46.404 -07 000000626 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:22:46.404 -07 000000626 INF: ===================  ===================
17-03-18 03:22:46.564 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 1
17-03-18 03:22:46.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=1, R2=0, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1619, R2=1686, Total=3305. Warn if over 250 bubbles per interval.
17-03-18 03:22:46.994 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.020806,
17-03-18 03:22:51.564 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-18 03:22:51.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1619, R2=1687, Total=3306. Warn if over 250 bubbles per interval.
17-03-18 03:22:52.354 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.042558,
17-03-18 03:22:52.984 -07 000000462 INF: WaitCommand(10000) end
17-03-18 03:22:52.984 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:22:52.984 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-18 03:22:52.984 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:22:53.014 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:22:53.014 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:22:53.014 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:22:53.144 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-18 03:22:53.184 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:22:56.564 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:22:56.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1619, R2=1687, Total=3306. Warn if over 250 bubbles per interval.
17-03-18 03:22:57.714 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.03576,
17-03-18 03:22:59.314 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:59.344 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:22:59.764 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:22:59.794 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:23:00.214 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:00.244 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:23:00.664 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:00.694 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:23:01.114 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:01.144 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:01.144 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-18 03:23:01.144 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:23:01.274 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:23:01.304 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:23:01.304 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:23:01.434 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:23:01.464 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:23:01.464 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:23:01.464 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:23:01.564 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 4 R1 4
17-03-18 03:23:01.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=4, R2=4, Total=8. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:01.594 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:23:01.624 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:02.054 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:02.084 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:02.084 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:23:02.084 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:23:03.074 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.996267,
17-03-18 03:23:03.304 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-18 03:23:03.304 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-18 03:23:03.304 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:23:03.324 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:23:03.324 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-18 03:23:03.324 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-18 03:23:03.534 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:23:03.554 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-18 03:23:03.554 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-18 03:23:03.604 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:23:03.624 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:23:03.624 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:23:03.724 -07 000000610 INF: =================== Cycle #112, Pumping Reagent IMT (1) ===================
17-03-18 03:23:03.724 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:23:03.724 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:23:03.754 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:23:03.754 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:23:03.754 -07 000000610 INF: =================== Cycle #112, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-18 03:23:03.884 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:23:03.924 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:23:05.364 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:05.394 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:23:05.814 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:05.844 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:05.844 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:23:05.844 -07 000000610 INF: =================== Cycle #112, Pumping Reagent IMT (1) ===================
17-03-18 03:23:05.974 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:23:06.004 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:23:06.004 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:23:06.134 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:23:06.164 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:23:06.164 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:23:06.164 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:23:06.294 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:23:06.324 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:06.564 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:23:06.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:06.754 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:06.784 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:06.784 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:23:06.784 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:23:08.004 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:23:08.004 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:23:08.004 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:23:08.024 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:23:08.024 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-18 03:23:08.024 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:23:08.254 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:23:08.274 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-18 03:23:08.274 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-18 03:23:08.324 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:23:08.344 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:23:08.344 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:23:08.434 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.001704,
17-03-18 03:23:08.444 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:23:08.444 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:23:08.444 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:23:08.474 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:23:08.474 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:23:08.474 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:23:08.604 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:23:08.644 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:23:09.514 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:09.544 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:09.544 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:23:09.544 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:23:09.674 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:23:09.704 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:23:09.704 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:23:09.834 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:23:09.864 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:23:09.864 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:23:09.864 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:23:09.994 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:23:10.024 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:10.454 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:10.484 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:10.484 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:23:10.484 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:23:10.484 -07 000000610 INF: =================== Cycle #112, Flow Cell Temp 65° ===================
17-03-18 03:23:10.484 -07 000000610 INF: =================== Cycle #112, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-18 03:23:10.484 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-18 03:23:10.484 -07 000000618 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:23:10.494 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:23:10.494 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:23:10.494 -07 000000424 INF: FPGA: Recv TEC2EN 
17-03-18 03:23:10.504 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:23:10.504 -07 000000610 INF: =================== Cycle #112, Flow Cell Temp 65° ===================
17-03-18 03:23:10.504 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:23:10.504 -07 000000610 INF: WaitCommand(30000) start
17-03-18 03:23:11.564 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:23:11.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:13.794 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.986717,
17-03-18 03:23:16.564 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:23:16.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:19.154 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.012614,
17-03-18 03:23:21.564 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:23:21.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:24.514 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.986717,
17-03-18 03:23:26.564 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:23:26.564 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:29.874 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.975845,
17-03-18 03:23:31.564 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:23:31.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:35.234 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.983999,
17-03-18 03:23:36.574 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:23:36.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:40.514 -07 000000610 INF: WaitCommand(30000) end
17-03-18 03:23:40.514 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:23:40.514 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-18 03:23:40.594 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.986717,
17-03-18 03:23:40.614 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:23:40.644 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:23:40.644 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:23:40.644 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:23:40.774 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-18 03:23:40.814 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:23:41.354 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:41.384 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:41.384 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete
17-03-18 03:23:41.384 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:23:41.514 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:23:41.554 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:23:41.554 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:23:41.574 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:23:41.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:41.684 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:23:41.714 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:23:41.714 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:23:41.714 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:23:41.844 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:23:41.874 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:42.304 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:42.334 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:42.334 -07 000000610 INF: LanePump: Waited 461 ms for pump motion to complete
17-03-18 03:23:42.334 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:23:42.334 -07 000000512 INF: WaitCommand(30000) start
17-03-18 03:23:42.334 -07 000000461 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:23:42.334 -07 000000461 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:23:43.554 -07 000000461 INF: AsyncDelayTimer waited 1213ms
17-03-18 03:23:43.554 -07 000000461 INF: LanePump: Xmit /1?\r
17-03-18 03:23:43.584 -07 000000461 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:23:43.584 -07 000000461 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:23:43.714 -07 000000461 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:23:43.754 -07 000000461 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:23:45.954 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.000345,
17-03-18 03:23:46.094 -07 000000461 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:46.124 -07 000000461 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:23:46.544 -07 000000461 INF: LanePump: Xmit /1Q\r
17-03-18 03:23:46.574 -07 000000461 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:23:46.574 -07 000000461 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-18 03:23:46.574 -07 000000461 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:23:46.574 -07 000000461 INF: ===================  ===================
17-03-18 03:23:46.574 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:23:46.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:51.314 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.985358,
17-03-18 03:23:51.574 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:23:51.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:56.574 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:23:56.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:23:56.674 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.978563,
17-03-18 03:24:01.574 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:24:01.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:24:02.034 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.007176,
17-03-18 03:24:06.574 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:24:06.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:24:07.394 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.986717,
17-03-18 03:24:11.574 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:24:11.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1623, R2=1691, Total=3314. Warn if over 250 bubbles per interval.
17-03-18 03:24:12.344 -07 000000512 INF: WaitCommand(30000) end
17-03-18 03:24:12.344 -07 000000610 INF: =================== Cycle #112, Flow Cell Temp 22° ===================
17-03-18 03:24:12.344 -07 000000610 INF: =================== Cycle #112, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-18 03:24:12.344 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-18 03:24:12.354 -07 000000455 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:24:12.354 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:24:12.354 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:24:12.354 -07 000000502 INF: FPGA: Recv TEC2EN 
17-03-18 03:24:12.364 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:12.364 -07 000000610 INF: =================== Cycle #112, Flow Cell Temp 22° ===================
17-03-18 03:24:12.364 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:24:12.364 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:24:12.364 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:24:12.364 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:24:12.404 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:24:12.404 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:24:12.404 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:24:12.534 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:24:12.574 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:24:12.754 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.971733,
17-03-18 03:24:15.704 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:24:15.734 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:24:16.154 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:24:16.184 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:24:16.574 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 6 R1 6
17-03-18 03:24:16.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=6, R2=6, Total=12. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1629, R2=1697, Total=3326. Warn if over 250 bubbles per interval.
17-03-18 03:24:16.604 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:24:16.634 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:24:16.634 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:24:16.634 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:24:16.764 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:24:16.794 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:24:16.794 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:24:16.924 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:24:16.954 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:24:16.954 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:24:16.954 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:24:17.084 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:24:17.114 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:24:17.544 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:24:17.574 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:24:17.574 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:24:17.574 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:24:18.114 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.989471,
17-03-18 03:24:18.794 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:24:18.794 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-18 03:24:18.794 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:24:18.814 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:24:18.814 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-18 03:24:18.814 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-18 03:24:18.964 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:24:18.984 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:24:18.984 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:24:19.034 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:24:19.054 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:24:19.054 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:24:19.154 -07 000000610 INF: =================== Cycle #112, Pumping Reagent USM (2) ===================
17-03-18 03:24:19.154 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:24:19.154 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:24:19.184 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:24:19.184 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:24:19.184 -07 000000610 INF: =================== Cycle #112, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-18 03:24:19.314 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:24:19.354 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:24:20.794 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:24:20.824 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:24:21.244 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:24:21.274 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:24:21.274 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:24:21.274 -07 000000610 INF: =================== Cycle #112, Pumping Reagent USM (2) ===================
17-03-18 03:24:21.404 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:24:21.434 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:24:21.434 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:24:21.564 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:24:21.574 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 1
17-03-18 03:24:21.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=1, R2=0, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1697, Total=3327. Warn if over 250 bubbles per interval.
17-03-18 03:24:21.594 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:24:21.594 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:24:21.594 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:24:21.724 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:24:21.754 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:24:22.184 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:24:22.214 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:24:22.214 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:24:22.214 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:24:23.434 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-18 03:24:23.434 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:24:23.434 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:24:23.454 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:24:23.454 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-18 03:24:23.454 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:24:23.474 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.030322,
17-03-18 03:24:23.604 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:24:23.624 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:24:23.624 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:24:23.674 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:24:23.694 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:24:23.694 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:24:23.794 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:24:23.794 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:24:23.794 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:24:23.824 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:24:23.824 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:24:23.824 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:24:23.954 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:24:23.994 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:24:24.864 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:24:24.894 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:24:24.894 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:24:24.894 -07 000000610 INF: =================== Cycle #112, Pumping Reagent PR2 (3) ===================
17-03-18 03:24:25.024 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:24:25.054 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:24:25.054 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:24:25.184 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:24:25.214 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:24:25.214 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:24:25.214 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:24:25.344 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:24:25.374 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:24:25.804 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:24:25.834 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:24:25.834 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:24:25.834 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:24:25.834 -07 000000590 INF: WaitCommand(10000) start
17-03-18 03:24:25.834 -07 000000502 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:24:25.834 -07 000000502 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:24:26.574 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-18 03:24:26.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:24:27.054 -07 000000502 INF: AsyncDelayTimer waited 1216ms
17-03-18 03:24:27.054 -07 000000502 INF: LanePump: Xmit /1?\r
17-03-18 03:24:27.084 -07 000000502 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:24:27.084 -07 000000502 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:24:27.214 -07 000000502 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:24:27.254 -07 000000502 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:24:28.784 -07 000000502 INF: LanePump: Xmit /1Q\r
17-03-18 03:24:28.814 -07 000000502 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:24:28.834 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.03576,
17-03-18 03:24:29.234 -07 000000502 INF: LanePump: Xmit /1Q\r
17-03-18 03:24:29.264 -07 000000502 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:24:29.264 -07 000000502 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:24:29.264 -07 000000502 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:24:29.264 -07 000000502 INF: ===================  ===================
17-03-18 03:24:31.574 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:24:31.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:24:34.194 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.019446,
17-03-18 03:24:35.844 -07 000000590 INF: WaitCommand(10000) end
17-03-18 03:24:35.844 -07 000000610 INF: =================== Cycle #112, Imaging ===================
17-03-18 03:24:35.844 -07 000000610 INF: Imaging Cycle 112: ScanTilesCommand Cycle 112 time start.
17-03-18 03:24:35.844 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-18 03:24:35.844 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:24:35.874 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:24:35.874 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-18 03:24:35.874 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-18 03:24:36.174 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:24:36.194 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:24:36.194 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:24:36.244 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:24:36.264 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:24:36.264 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:24:36.264 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:24:36.264 -07 000000579 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-18 03:24:36.264 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:24:36.264 -07 000000579 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-18 03:24:36.274 -07 000000424 INF: FPGA: Recv EXLED1ON 
17-03-18 03:24:36.274 -07 000000579 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:24:36.274 -07 000000579 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-18 03:24:36.274 -07 000000569 INF: FPGA: Recv EXLED1ADCR 23168
17-03-18 03:24:36.284 -07 000000579 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:36.284 -07 000000579 INF: RedLED: Using Red data: Photodiode ADC 23168 --> 7.4 mW (old method), or 205.3 mW (new method). Difference = 197.9 mW
17-03-18 03:24:36.284 -07 000000579 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-18 03:24:36.284 -07 000000467 INF: FPGA: Recv EXLED1OFF 
17-03-18 03:24:36.294 -07 000000579 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:36.294 -07 000000579 INF: RedLED: LED was on for 19 ms
17-03-18 03:24:36.294 -07 000000579 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 23 ms.
17-03-18 03:24:36.294 -07 000000579 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-18 03:24:36.294 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:24:36.294 -07 000000579 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-18 03:24:36.294 -07 000000618 INF: FPGA: Recv EXLED2ON 
17-03-18 03:24:36.304 -07 000000579 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:24:36.304 -07 000000579 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:24:36.304 -07 000000591 INF: FPGA: Recv EXLED1ADCR 2101
17-03-18 03:24:36.314 -07 000000579 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:36.314 -07 000000579 INF: GreenLED: Using Green data: Photodiode ADC 2101 --> 0.9 mW (old method), or 182.5 mW (new method). Difference = 181.6 mW
17-03-18 03:24:36.314 -07 000000579 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-18 03:24:36.314 -07 000000576 INF: FPGA: Recv EXLED2OFF 
17-03-18 03:24:36.324 -07 000000579 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:36.324 -07 000000579 INF: GreenLED: LED was on for 20 ms
17-03-18 03:24:36.324 -07 000000579 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-18 03:24:36.324 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:24:36.324 -07 000000455 INF: FPGA: Recv EMCUR 
17-03-18 03:24:36.334 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:24:36.334 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-18 03:24:36.574 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:24:36.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:24:36.834 -07 000000462 INF: FPGA: Recv EMOUT
17-03-18 03:24:36.834 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 494 ms to get response, and 502 ms overall
17-03-18 03:24:36.834 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-18 03:24:36.834 -07 000000579 INF: FPGA: Recv EMCUR 
17-03-18 03:24:36.844 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:24:36.844 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:24:36.844 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.38427734375, Z-Position -0.126837503122881. ------
17-03-18 03:24:36.844 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:24:36.844 -07 000000561 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17861 mm
17-03-18 03:24:36.844 -07 000000561 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:24:36.844 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:24:36.854 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:24:36.854 -07 000000455 INF: Y Motor: Moving to 59.9126 mm, started at 75.3843 mm, delta = -15.4717 mm
17-03-18 03:24:36.854 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:36.854 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:24:36.854 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 39017, sync = True, waitForSettling = False)
17-03-18 03:24:36.854 -07 000000618 INF: Z Motor: Moving to -0.178608 mm, started at -0.126838 mm, distance = -51.77 um
17-03-18 03:24:36.854 -07 000000591 INF: FPGA: Recv YRDPOS 154387
17-03-18 03:24:36.864 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:36.864 -07 000000455 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:36.864 -07 000000455 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-18 03:24:36.864 -07 000000455 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:24:36.864 -07 000000512 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:24:36.874 -07 000000618 INF: FPGA: Xmit ZDACW 39017\n [Z Motor]
17-03-18 03:24:36.874 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:24:36.884 -07 000000455 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:24:36.884 -07 000000618 INF: FPGA: 'ZDACW 39017' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:24:36.894 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:36.894 -07 000000579 INF: FPGA: Recv ZDACR 39017
17-03-18 03:24:36.904 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:24:36.904 -07 000000618 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-18 03:24:37.064 -07 000000424 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:24:37.064 -07 000000512 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 212 ms overall
17-03-18 03:24:38.564 -07 000000606 INF: FPGA: Recv YMVTO 122703 24783
17-03-18 03:24:38.564 -07 000000455 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1706 ms overall
17-03-18 03:24:38.564 -07 000000455 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:24:38.564 -07 000000455 INF: Y Motor: To move from 75.384 to 59.913 (-15.472 mm) should take 24755 steps, but required 24783 steps (15.489 mm). Slippage = 0.018 mm (0.00%).
17-03-18 03:24:38.564 -07 000000455 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1706 ms, distance = 15.472 mm, average velocity = 9.069 mm/sec
17-03-18 03:24:39.554 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.015368,
17-03-18 03:24:41.414 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:41.414 -07 000000461 INF: FPGA: Recv YRDPOS 122696
17-03-18 03:24:41.424 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:24:41.424 -07 000000455 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:41.444 -07 000000455 INF: Y Motor: After move to 59.912609, error = -0.002453, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:24:41.444 -07 000000455 INF: Y Motor: Position error after settling = -5 encoder counts (-0.002 mm), Delta during settling = -7 counts (-0.003 mm)
17-03-18 03:24:41.444 -07 000000455 INF: Y Motor: Moved to 59.9102 after 4599 ms
17-03-18 03:24:41.454 -07 000000561 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178608 mm (DAC = 39017)
17-03-18 03:24:41.454 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:41.454 -07 000000467 INF: FPGA: Recv ZSGSRD 37091
17-03-18 03:24:41.464 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:24:41.464 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:41.464 -07 000000501 INF: FPGA: Recv ZSGSRD 37089
17-03-18 03:24:41.474 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:41.474 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:41.474 -07 000000576 INF: FPGA: Recv ZSGSRD 37091
17-03-18 03:24:41.484 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:41.484 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:41.484 -07 000000579 INF: FPGA: Recv ZSGSRD 37085
17-03-18 03:24:41.494 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:41.494 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:41.494 -07 000000455 INF: FPGA: Recv ZSGSRD 37086
17-03-18 03:24:41.504 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:41.504 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:41.504 -07 000000467 INF: FPGA: Recv ZSGSRD 37096
17-03-18 03:24:41.514 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:41.514 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:41.514 -07 000000430 INF: FPGA: Recv ZSGSRD 37091
17-03-18 03:24:41.524 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:41.524 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:41.524 -07 000000618 INF: FPGA: Recv ZSGSRD 37095
17-03-18 03:24:41.534 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:41.534 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:41.534 -07 000000444 INF: FPGA: Recv ZSGSRD 37096
17-03-18 03:24:41.544 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:41.544 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:41.544 -07 000000462 INF: FPGA: Recv ZSGSRD 37092
17-03-18 03:24:41.554 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:41.554 -07 000000561 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:24:41.554 -07 000000591 INF: FPGA: Recv ZPIEZORD 33360
17-03-18 03:24:41.564 -07 000000561 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:41.564 -07 000000561 INF: Z Motor: Piezo is near 51.3 V (nominally 0 to 100 V), expect near 59.5 V, since DAC is at 5.954 V. Piezo Error = -8.3 V.
17-03-18 03:24:41.564 -07 000000561 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.6 um, Read 10 ADC samples: Avg = 37091 (-177.7 uncal um), Error = 0.9 uncal um, Median = 37091 (-177.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 37085 (-177.7 uncal um), Max = 37096 (-177.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:24:41.564 -07 000000561 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37091, posNoise = 5, negNoise = 6
17-03-18 03:24:41.564 -07 000000561 INF: Z Motor: After move to -0.178608, error = 0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:24:41.564 -07 000000561 INF: Z Motor: Settle wait time = 4601 ms, measure time = 109 ms (allowed 150 ms), total time = 4710 ms
17-03-18 03:24:41.564 -07 000000561 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:24:41.574 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:24:41.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:24:41.614 -07 000000561 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4764 ms
17-03-18 03:24:41.614 -07 000000561 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:24:41.614 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:24:41.614 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:24:41.614 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:24:41.614 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:24:41.614 -07 000000467 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:24:41.614 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:24:41.614 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:24:41.614 -07 000000467 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:24:41.644 -07 000000467 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 03:24:41.644 -07 000000467 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:24:41.644 -07 000000467 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:24:41.644 -07 000000467 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:24:41.654 -07 000000467 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 03:24:41.654 -07 000000467 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms.
17-03-18 03:24:41.664 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:24:41.704 -07 000000569 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:24:42.004 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:24:42.004 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:24:42.004 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:24:42.014 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611983640, 0x0, 559484976) start.
17-03-18 03:24:42.044 -07 000000629 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:24:42.044 -07 000000467 INF: FPGA: Recv CAMSNAP
17-03-18 03:24:42.044 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 377 ms to get response, and 385 ms overall
17-03-18 03:24:42.134 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611983640, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 03:24:42.134 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:42.134 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:24:42.134 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 03:24:42.244 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:24:42.244 -07 000000626 INF: Image SNR check: start
17-03-18 03:24:42.244 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:24:42.254 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:24:42.254 -07 000000462 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:24:42.254 -07 000000626 INF: Image SNR check: pass  [peak (Max-Min)=154.30]
17-03-18 03:24:42.254 -07 000000626 INF: Autofocus start
17-03-18 03:24:42.254 -07 000000626 INF: MeasureProfile start
17-03-18 03:24:42.264 -07 000000626 INF: MeasureProfile done
17-03-18 03:24:42.264 -07 000000626 INF: X=32  Z correction [um]=0.09220707
17-03-18 03:24:42.264 -07 000000626 INF: Autofocus finished
17-03-18 03:24:42.454 -07 000000512 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:24:42.454 -07 000000462 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:24:42.454 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91015625, Z-position -0.178603804561191. ----------
17-03-18 03:24:42.454 -07 000000610 INF: Cycle	112	Tile	1	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:24:42.464 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37549, sync = True, waitForSettling = True)
17-03-18 03:24:42.464 -07 000000610 INF: Z Motor: Moving to -0.171888 mm, started at -0.178604 mm, distance = 6.72 um
17-03-18 03:24:42.464 -07 000000610 INF: FPGA: Xmit ZDACW 37549\n [Z Motor]
17-03-18 03:24:42.464 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:24:42.474 -07 000000610 INF: FPGA: 'ZDACW 37549' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.474 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:42.474 -07 000000424 INF: FPGA: Recv ZDACR 37549
17-03-18 03:24:42.484 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.484 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:24:42.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:42.634 -07 000000629 INF: FPGA: Recv ZSGSRD 36050
17-03-18 03:24:42.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:24:42.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:42.644 -07 000000618 INF: FPGA: Recv ZSGSRD 36046
17-03-18 03:24:42.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:42.654 -07 000000590 INF: FPGA: Recv ZSGSRD 36050
17-03-18 03:24:42.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:42.664 -07 000000606 INF: FPGA: Recv ZSGSRD 36047
17-03-18 03:24:42.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:42.674 -07 000000501 INF: FPGA: Recv ZSGSRD 36045
17-03-18 03:24:42.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:42.684 -07 000000569 INF: FPGA: Recv ZSGSRD 36047
17-03-18 03:24:42.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:42.694 -07 000000618 INF: FPGA: Recv ZSGSRD 36046
17-03-18 03:24:42.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:42.704 -07 000000455 INF: FPGA: Recv ZSGSRD 36054
17-03-18 03:24:42.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:42.714 -07 000000626 INF: FPGA: Recv ZSGSRD 36045
17-03-18 03:24:42.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:42.724 -07 000000430 INF: FPGA: Recv ZSGSRD 36042
17-03-18 03:24:42.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.734 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:24:42.734 -07 000000629 INF: FPGA: Recv ZPIEZORD 31937
17-03-18 03:24:42.744 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:42.744 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.730 V. Piezo Error = -9.1 V.
17-03-18 03:24:42.744 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36047 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36046 (-171.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36042 (-171.0 uncal um), Max = 36054 (-171.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:24:42.744 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36047, posNoise = 7, negNoise = 5
17-03-18 03:24:42.744 -07 000000610 INF: Z Motor: After move to -0.171888, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:24:42.744 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 03:24:42.744 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:24:42.744 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:24:42.744 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:24:42.744 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:24:42.744 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:24:42.744 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:24:42.744 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:24:42.744 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:24:42.744 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:24:42.744 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:24:42.744 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:24:42.744 -07 000000430 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:24:42.754 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:24:42.754 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:24:42.764 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:24:42.764 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:24:42.764 -07 000000430 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 21 ms.
17-03-18 03:24:42.764 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:24:42.774 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:24:42.774 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:24:42.784 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 03:24:42.784 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 39 ms.
17-03-18 03:24:42.784 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 37726 150\n [Camera]
17-03-18 03:24:42.984 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:24:43.394 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:24:43.394 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:24:43.394 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:24:43.394 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:24:43.394 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:24:43.394 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:24:43.404 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:24:43.404 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:24:43.544 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:24:43.544 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:24:43.584 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37726 792
17-03-18 03:24:43.734 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:24:43.804 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 406 ms.
17-03-18 03:24:43.804 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 03:24:43.804 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:43.814 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:24:43.814 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 417 ms.
17-03-18 03:24:43.924 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:24:43.924 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:24:43.934 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:24:43.934 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:24:43.934 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:24:43.934 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:24:43.934 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:24:43.934 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:24:43.934 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 390 ms.
17-03-18 03:24:43.934 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:24:43.934 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:43.934 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:24:43.944 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 547 ms.
17-03-18 03:24:43.944 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:24:43.944 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:24:44.124 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:24:44.124 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:24:44.124 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 37726 150' command took 2 ms to send, 1330 ms to get response, and 1334 ms overall
17-03-18 03:24:44.124 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.172210
17-03-18 03:24:44.124 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17221 mm
17-03-18 03:24:44.124 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:24:44.124 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:24:44.124 -07 000000591 INF: Y Motor: Moving to 60.7426 mm, started at 59.9102 mm, delta = 0.8325 mm
17-03-18 03:24:44.124 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:44.124 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 37619, sync = True, waitForSettling = False)
17-03-18 03:24:44.124 -07 000000561 INF: Z Motor: Moving to -0.172209 mm, started at -0.171897 mm, distance = -0.31 um
17-03-18 03:24:44.134 -07 000000561 INF: FPGA: Xmit ZDACW 37619\n [Z Motor]
17-03-18 03:24:44.134 -07 000000626 INF: FPGA: Recv YRDPOS 122696
17-03-18 03:24:44.134 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:24:44.134 -07 000000591 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:44.134 -07 000000591 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:24:44.134 -07 000000591 INF: Y Motor: Moving 1332 steps2
17-03-18 03:24:44.134 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:24:44.144 -07 000000561 INF: FPGA: 'ZDACW 37619' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:24:44.144 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:24:44.154 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:44.154 -07 000000455 INF: FPGA: Recv ZDACR 37619
17-03-18 03:24:44.164 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:24:44.164 -07 000000561 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:24:44.324 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:24:44.324 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:24:44.324 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:44.324 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:24:44.324 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:24:44.324 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:44.324 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:24:44.324 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:24:44.334 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:24:44.344 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-18 03:24:44.514 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:24:44.514 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:24:44.554 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:44.554 -07 000000561 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:24:44.564 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:24:44.564 -07 000000591 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:44.564 -07 000000591 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 03:24:44.564 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.832 mm, average velocity = 2.151 mm/sec
17-03-18 03:24:44.914 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.037119,
17-03-18 03:24:45.514 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:45.514 -07 000000579 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:24:45.524 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:24:45.524 -07 000000591 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:45.554 -07 000000591 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:24:45.554 -07 000000591 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:24:45.554 -07 000000591 INF: Y Motor: Moved to 60.7324 after 1424 ms (table move)
17-03-18 03:24:45.554 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172209 mm (DAC = 37619)
17-03-18 03:24:45.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.554 -07 000000501 INF: FPGA: Recv ZSGSRD 36094
17-03-18 03:24:45.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:24:45.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.564 -07 000000455 INF: FPGA: Recv ZSGSRD 36101
17-03-18 03:24:45.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.574 -07 000000579 INF: FPGA: Recv ZSGSRD 36094
17-03-18 03:24:45.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.584 -07 000000629 INF: FPGA: Recv ZSGSRD 36094
17-03-18 03:24:45.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.594 -07 000000576 INF: FPGA: Recv ZSGSRD 36099
17-03-18 03:24:45.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.604 -07 000000430 INF: FPGA: Recv ZSGSRD 36095
17-03-18 03:24:45.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.614 -07 000000618 INF: FPGA: Recv ZSGSRD 36104
17-03-18 03:24:45.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.624 -07 000000444 INF: FPGA: Recv ZSGSRD 36093
17-03-18 03:24:45.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.634 -07 000000455 INF: FPGA: Recv ZSGSRD 36093
17-03-18 03:24:45.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.644 -07 000000424 INF: FPGA: Recv ZSGSRD 36102
17-03-18 03:24:45.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.654 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:24:45.654 -07 000000461 INF: FPGA: Recv ZPIEZORD 32052
17-03-18 03:24:45.664 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.664 -07 000000610 INF: Z Motor: Piezo is near 48.5 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.740 V. Piezo Error = -8.9 V.
17-03-18 03:24:45.664 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36097 (-171.3 uncal um), Error = 0.9 uncal um, Median = 36094 (-171.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36093 (-171.3 uncal um), Max = 36104 (-171.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:24:45.664 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36097, posNoise = 7, negNoise = 4
17-03-18 03:24:45.664 -07 000000610 INF: Z Motor: After move to -0.172209, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:24:45.664 -07 000000610 INF: Z Motor: Settle wait time = 1426 ms, measure time = 107 ms (allowed 150 ms), total time = 1533 ms
17-03-18 03:24:45.664 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:24:45.714 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-18 03:24:45.714 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:24:45.714 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.17221813769228. ----------
17-03-18 03:24:45.714 -07 000000610 INF: Cycle	112	Tile	2	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:24:45.714 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37443, sync = True, waitForSettling = True)
17-03-18 03:24:45.714 -07 000000610 INF: Z Motor: Moving to -0.171403 mm, started at -0.172218 mm, distance = 0.82 um
17-03-18 03:24:45.714 -07 000000610 INF: FPGA: Xmit ZDACW 37443\n [Z Motor]
17-03-18 03:24:45.714 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:24:45.724 -07 000000610 INF: FPGA: 'ZDACW 37443' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:24:45.724 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:45.724 -07 000000626 INF: FPGA: Recv ZDACR 37443
17-03-18 03:24:45.734 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.734 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:24:45.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.884 -07 000000618 INF: FPGA: Recv ZSGSRD 35969
17-03-18 03:24:45.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:24:45.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.894 -07 000000444 INF: FPGA: Recv ZSGSRD 35975
17-03-18 03:24:45.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.904 -07 000000430 INF: FPGA: Recv ZSGSRD 35979
17-03-18 03:24:45.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.914 -07 000000455 INF: FPGA: Recv ZSGSRD 35973
17-03-18 03:24:45.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.924 -07 000000424 INF: FPGA: Recv ZSGSRD 35972
17-03-18 03:24:45.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.934 -07 000000512 INF: FPGA: Recv ZSGSRD 35972
17-03-18 03:24:45.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.944 -07 000000462 INF: FPGA: Recv ZSGSRD 35965
17-03-18 03:24:45.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.954 -07 000000591 INF: FPGA: Recv ZSGSRD 35972
17-03-18 03:24:45.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.964 -07 000000618 INF: FPGA: Recv ZSGSRD 35973
17-03-18 03:24:45.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:45.974 -07 000000444 INF: FPGA: Recv ZSGSRD 35971
17-03-18 03:24:45.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.984 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:24:45.984 -07 000000455 INF: FPGA: Recv ZPIEZORD 31835
17-03-18 03:24:45.994 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:45.994 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.713 V. Piezo Error = -9.1 V.
17-03-18 03:24:45.994 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.4 um, Read 10 ADC samples: Avg = 35972 (-170.5 uncal um), Error = 0.9 uncal um, Median = 35972 (-170.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35965 (-170.5 uncal um), Max = 35979 (-170.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:24:45.994 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35972, posNoise = 7, negNoise = 7
17-03-18 03:24:45.994 -07 000000610 INF: Z Motor: After move to -0.171403, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:24:45.994 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:24:45.994 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:24:45.994 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:24:45.994 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:24:45.994 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:24:45.994 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:24:45.994 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:24:45.994 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:24:45.994 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:24:45.994 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:24:45.994 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:24:45.994 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:24:45.994 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:24:46.004 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:24:46.004 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:24:46.004 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:24:46.004 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:24:46.014 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:24:46.014 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:24:46.014 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:24:46.014 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:24:46.024 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 37619 150\n [Camera]
17-03-18 03:24:46.224 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:24:46.574 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:24:46.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:24:46.624 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:24:46.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:24:46.624 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:24:46.624 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:24:46.624 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:24:46.624 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:24:46.624 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:24:46.624 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:24:46.624 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:24:46.624 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:24:46.814 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37619 790
17-03-18 03:24:46.964 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:24:47.024 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:24:47.024 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:24:47.024 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:47.024 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 03:24:47.034 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:24:47.034 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:47.034 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:24:47.034 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:24:47.034 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:24:47.044 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-18 03:24:47.164 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:24:47.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:24:47.164 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:24:47.164 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:24:47.164 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:24:47.164 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:24:47.164 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:24:47.164 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:24:47.164 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:24:47.164 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:24:47.354 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:24:47.354 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:24:47.354 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 37619 150' command took 2 ms to send, 1325 ms to get response, and 1335 ms overall
17-03-18 03:24:47.354 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:24:47.354 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.732421875, Z-Position -0.17141511117456. ------
17-03-18 03:24:47.364 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:24:47.364 -07 000000618 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17806 mm
17-03-18 03:24:47.364 -07 000000618 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:24:47.364 -07 000000430 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:24:47.364 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:24:47.364 -07 000000424 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm
17-03-18 03:24:47.364 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 38898, sync = True, waitForSettling = False)
17-03-18 03:24:47.364 -07 000000606 INF: Z Motor: Moving to -0.178064 mm, started at -0.171415 mm, distance = -6.65 um
17-03-18 03:24:47.374 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:47.374 -07 000000606 INF: FPGA: Xmit ZDACW 38898\n [Z Motor]
17-03-18 03:24:47.374 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:24:47.384 -07 000000606 INF: FPGA: 'ZDACW 38898' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:24:47.384 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:47.384 -07 000000579 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:24:47.394 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:24:47.394 -07 000000424 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:47.394 -07 000000424 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:24:47.394 -07 000000424 INF: Y Motor: Moving 1344 steps-21
17-03-18 03:24:47.394 -07 000000591 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:24:47.404 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:47.404 -07 000000501 INF: FPGA: Recv ZDACR 38898
17-03-18 03:24:47.414 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:24:47.414 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-18 03:24:47.414 -07 000000606 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet))
17-03-18 03:24:47.564 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 395 ms.
17-03-18 03:24:47.564 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:24:47.564 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:47.564 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 398 ms.
17-03-18 03:24:47.564 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:24:47.564 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:47.564 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:24:47.564 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:24:47.564 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:24:47.574 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-18 03:24:47.594 -07 000000629 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:24:47.594 -07 000000591 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 223 ms overall
17-03-18 03:24:47.794 -07 000000430 INF: FPGA: Recv YMVTILE
17-03-18 03:24:47.794 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 2 ms to send, 371 ms to get response, and 400 ms overall
17-03-18 03:24:47.834 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:47.844 -07 000000579 INF: FPGA: Recv YRDPOS 126081
17-03-18 03:24:47.844 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:24:47.844 -07 000000424 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:47.844 -07 000000424 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:24:47.844 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.840 mm, average velocity = 2.100 mm/sec
17-03-18 03:24:48.794 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:48.794 -07 000000629 INF: FPGA: Recv YRDPOS 126082
17-03-18 03:24:48.804 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:24:48.804 -07 000000424 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:48.824 -07 000000424 INF: Y Motor: After move to 61.572609, error = -0.009132, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:24:48.824 -07 000000424 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:24:48.824 -07 000000424 INF: Y Motor: Moved to 61.5635 after 1465 ms (table move)
17-03-18 03:24:48.834 -07 000000618 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178064 mm (DAC = 38898)
17-03-18 03:24:48.834 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:48.834 -07 000000461 INF: FPGA: Recv ZSGSRD 37017
17-03-18 03:24:48.844 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:24:48.844 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:48.844 -07 000000629 INF: FPGA: Recv ZSGSRD 37007
17-03-18 03:24:48.854 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:48.854 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:48.854 -07 000000455 INF: FPGA: Recv ZSGSRD 37011
17-03-18 03:24:48.864 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:48.864 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:48.864 -07 000000501 INF: FPGA: Recv ZSGSRD 37007
17-03-18 03:24:48.874 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:48.874 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:48.874 -07 000000467 INF: FPGA: Recv ZSGSRD 37014
17-03-18 03:24:48.884 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:48.884 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:48.884 -07 000000561 INF: FPGA: Recv ZSGSRD 37007
17-03-18 03:24:48.894 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:48.894 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:48.894 -07 000000576 INF: FPGA: Recv ZSGSRD 37009
17-03-18 03:24:48.904 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:48.904 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:48.904 -07 000000444 INF: FPGA: Recv ZSGSRD 37009
17-03-18 03:24:48.914 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:48.914 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:48.914 -07 000000424 INF: FPGA: Recv ZSGSRD 37002
17-03-18 03:24:48.924 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:48.924 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:48.924 -07 000000430 INF: FPGA: Recv ZSGSRD 37004
17-03-18 03:24:48.934 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:48.934 -07 000000618 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:24:48.934 -07 000000561 INF: FPGA: Recv ZPIEZORD 33248
17-03-18 03:24:48.944 -07 000000618 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:48.944 -07 000000618 INF: Z Motor: Piezo is near 51.0 V (nominally 0 to 100 V), expect near 59.4 V, since DAC is at 5.935 V. Piezo Error = -8.3 V.
17-03-18 03:24:48.944 -07 000000618 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.1 um, Read 10 ADC samples: Avg = 37009 (-177.2 uncal um), Error = 0.9 uncal um, Median = 37008 (-177.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 37002 (-177.1 uncal um), Max = 37017 (-177.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:24:48.944 -07 000000618 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37009, posNoise = 8, negNoise = 7
17-03-18 03:24:48.944 -07 000000618 INF: Z Motor: After move to -0.178064, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:24:48.944 -07 000000618 INF: Z Motor: Settle wait time = 1468 ms, measure time = 108 ms (allowed 150 ms), total time = 1576 ms
17-03-18 03:24:48.944 -07 000000618 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:24:48.994 -07 000000618 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1629 ms
17-03-18 03:24:48.994 -07 000000618 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:24:48.994 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:24:48.994 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:24:48.994 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:24:48.994 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:24:48.994 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:24:48.994 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:24:48.994 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:24:48.994 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:24:49.004 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:24:49.004 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:24:49.014 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:24:49.014 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 03:24:49.014 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:24:49.064 -07 000000462 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:24:49.364 -07 000000569 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:24:49.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:24:49.364 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:24:49.484 -07 000000424 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:24:49.484 -07 000000424 INF: FPGA: Recv CAMSNAP
17-03-18 03:24:49.484 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611983640, 0x0, 559484976) start.
17-03-18 03:24:49.484 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 460 ms to get response, and 463 ms overall
17-03-18 03:24:49.604 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611983640, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:24:49.604 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:49.604 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:24:49.604 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 247 ms.
17-03-18 03:24:49.684 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:24:49.684 -07 000000576 INF: Autofocus start
17-03-18 03:24:49.684 -07 000000576 INF: MeasureProfile start
17-03-18 03:24:49.684 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:24:49.694 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:24:49.694 -07 000000629 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:24:49.694 -07 000000576 INF: MeasureProfile done
17-03-18 03:24:49.694 -07 000000576 INF: X=0  Z correction [um]=-0.0713522
17-03-18 03:24:49.694 -07 000000576 INF: Autofocus finished
17-03-18 03:24:49.894 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:24:49.894 -07 000000629 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 192 ms to get response, and 202 ms overall
17-03-18 03:24:49.894 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.5634765625, Z-position -0.178077019165566. ----------
17-03-18 03:24:49.894 -07 000000610 INF: Cycle	112	Tile	3	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:24:49.904 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37395, sync = True, waitForSettling = True)
17-03-18 03:24:49.904 -07 000000610 INF: Z Motor: Moving to -0.171183 mm, started at -0.178077 mm, distance = 6.89 um
17-03-18 03:24:49.904 -07 000000610 INF: FPGA: Xmit ZDACW 37395\n [Z Motor]
17-03-18 03:24:49.904 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:24:49.914 -07 000000610 INF: FPGA: 'ZDACW 37395' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:49.914 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:49.914 -07 000000455 INF: FPGA: Recv ZDACR 37395
17-03-18 03:24:49.924 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:49.924 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:24:50.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:50.074 -07 000000461 INF: FPGA: Recv ZSGSRD 35932
17-03-18 03:24:50.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:24:50.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:50.084 -07 000000606 INF: FPGA: Recv ZSGSRD 35935
17-03-18 03:24:50.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:50.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:50.094 -07 000000444 INF: FPGA: Recv ZSGSRD 35938
17-03-18 03:24:50.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:50.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:50.104 -07 000000569 INF: FPGA: Recv ZSGSRD 35933
17-03-18 03:24:50.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:50.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:50.114 -07 000000629 INF: FPGA: Recv ZSGSRD 35938
17-03-18 03:24:50.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:50.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:50.124 -07 000000462 INF: FPGA: Recv ZSGSRD 35935
17-03-18 03:24:50.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:50.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:50.134 -07 000000502 INF: FPGA: Recv ZSGSRD 35940
17-03-18 03:24:50.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:50.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:50.144 -07 000000424 INF: FPGA: Recv ZSGSRD 35940
17-03-18 03:24:50.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:50.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:50.154 -07 000000606 INF: FPGA: Recv ZSGSRD 35936
17-03-18 03:24:50.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:50.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:50.164 -07 000000576 INF: FPGA: Recv ZSGSRD 35933
17-03-18 03:24:50.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:50.174 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:24:50.174 -07 000000590 INF: FPGA: Recv ZPIEZORD 31828
17-03-18 03:24:50.184 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:50.184 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.706 V. Piezo Error = -9.1 V.
17-03-18 03:24:50.184 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.2 um, Read 10 ADC samples: Avg = 35936 (-170.3 uncal um), Error = 0.9 uncal um, Median = 35936 (-170.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35932 (-170.3 uncal um), Max = 35940 (-170.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:24:50.184 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35936, posNoise = 4, negNoise = 4
17-03-18 03:24:50.184 -07 000000610 INF: Z Motor: After move to -0.171183, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:24:50.184 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:24:50.184 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:24:50.184 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:24:50.184 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:24:50.184 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:24:50.184 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:24:50.184 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:24:50.184 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:24:50.184 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:24:50.184 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:24:50.184 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:24:50.184 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:24:50.184 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:24:50.184 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:24:50.194 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:24:50.194 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:24:50.194 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:24:50.194 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:24:50.194 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:24:50.194 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:24:50.194 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:24:50.204 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 37571 150\n [Camera]
17-03-18 03:24:50.274 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.981281,
17-03-18 03:24:50.404 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:24:50.804 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:24:50.804 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:24:50.814 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:24:50.814 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:24:50.814 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:24:50.814 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:24:50.814 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:24:50.814 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:24:50.814 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:24:50.814 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:24:51.004 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37571 790
17-03-18 03:24:51.154 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:24:51.194 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:24:51.194 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:24:51.194 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:51.194 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:24:51.194 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:24:51.194 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:24:51.194 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:51.194 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:24:51.194 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:24:51.204 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:24:51.344 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:24:51.344 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:24:51.344 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:24:51.344 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:24:51.344 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:24:51.354 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:24:51.354 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:24:51.354 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:24:51.354 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:24:51.354 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:24:51.534 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:24:51.534 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:24:51.534 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 37571 150' command took 2 ms to send, 1329 ms to get response, and 1335 ms overall
17-03-18 03:24:51.674 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:24:51.674 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:24:51.674 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.171508
17-03-18 03:24:51.674 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17151 mm
17-03-18 03:24:51.674 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:24:51.674 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:24:51.674 -07 000000512 INF: Y Motor: Moving to 62.4026 mm, started at 61.5635 mm, delta = 0.8391 mm
17-03-18 03:24:51.674 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 37466, sync = True, waitForSettling = False)
17-03-18 03:24:51.674 -07 000000606 INF: Z Motor: Moving to -0.171508 mm, started at -0.171184 mm, distance = -0.32 um
17-03-18 03:24:51.674 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:51.684 -07 000000606 INF: FPGA: Xmit ZDACW 37466\n [Z Motor]
17-03-18 03:24:51.684 -07 000000561 INF: FPGA: Recv YRDPOS 126082
17-03-18 03:24:51.684 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:24:51.684 -07 000000512 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:51.684 -07 000000512 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:24:51.684 -07 000000512 INF: Y Motor: Moving 1343 steps-20
17-03-18 03:24:51.684 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:24:51.694 -07 000000606 INF: FPGA: 'ZDACW 37466' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:24:51.694 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:24:51.704 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:51.704 -07 000000424 INF: FPGA: Recv ZDACR 37466
17-03-18 03:24:51.714 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:24:51.714 -07 000000606 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:24:51.734 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:24:51.734 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:24:51.734 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:51.734 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:24:51.734 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:24:51.734 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:51.734 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:24:51.734 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:24:51.734 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:24:51.744 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:24:52.064 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:24:52.064 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 03:24:52.114 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:52.124 -07 000000462 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:24:52.124 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:24:52.124 -07 000000512 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:52.124 -07 000000512 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 03:24:52.124 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.839 mm, average velocity = 2.180 mm/sec
17-03-18 03:24:53.074 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:53.074 -07 000000569 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:24:53.084 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.084 -07 000000512 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:53.104 -07 000000512 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:24:53.104 -07 000000512 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:24:53.104 -07 000000512 INF: Y Motor: Moved to 62.3950 after 1430 ms (table move)
17-03-18 03:24:53.114 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171508 mm (DAC = 37466)
17-03-18 03:24:53.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.114 -07 000000579 INF: FPGA: Recv ZSGSRD 35980
17-03-18 03:24:53.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:24:53.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.124 -07 000000467 INF: FPGA: Recv ZSGSRD 35991
17-03-18 03:24:53.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.134 -07 000000430 INF: FPGA: Recv ZSGSRD 35996
17-03-18 03:24:53.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.144 -07 000000591 INF: FPGA: Recv ZSGSRD 35984
17-03-18 03:24:53.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.154 -07 000000576 INF: FPGA: Recv ZSGSRD 35989
17-03-18 03:24:53.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.164 -07 000000462 INF: FPGA: Recv ZSGSRD 35989
17-03-18 03:24:53.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.174 -07 000000590 INF: FPGA: Recv ZSGSRD 35987
17-03-18 03:24:53.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.184 -07 000000461 INF: FPGA: Recv ZSGSRD 35987
17-03-18 03:24:53.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:24:53.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.194 -07 000000501 INF: FPGA: Recv ZSGSRD 35980
17-03-18 03:24:53.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.204 -07 000000444 INF: FPGA: Recv ZSGSRD 35995
17-03-18 03:24:53.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.214 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:24:53.214 -07 000000430 INF: FPGA: Recv ZPIEZORD 31915
17-03-18 03:24:53.224 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.224 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.717 V. Piezo Error = -9.0 V.
17-03-18 03:24:53.224 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.5 um, Read 10 ADC samples: Avg = 35988 (-170.6 uncal um), Error = 0.9 uncal um, Median = 35988 (-170.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35980 (-170.6 uncal um), Max = 35996 (-170.7 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:24:53.224 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35988, posNoise = 8, negNoise = 8
17-03-18 03:24:53.224 -07 000000610 INF: Z Motor: After move to -0.171508, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:24:53.224 -07 000000610 INF: Z Motor: Settle wait time = 1432 ms, measure time = 108 ms (allowed 150 ms), total time = 1540 ms
17-03-18 03:24:53.224 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:24:53.274 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-18 03:24:53.274 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:24:53.274 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.171517898568828. ----------
17-03-18 03:24:53.274 -07 000000610 INF: Cycle	112	Tile	4	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:24:53.274 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37289, sync = True, waitForSettling = True)
17-03-18 03:24:53.274 -07 000000610 INF: Z Motor: Moving to -0.170698 mm, started at -0.171518 mm, distance = 0.82 um
17-03-18 03:24:53.274 -07 000000610 INF: FPGA: Xmit ZDACW 37289\n [Z Motor]
17-03-18 03:24:53.274 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:24:53.284 -07 000000610 INF: FPGA: 'ZDACW 37289' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:24:53.284 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:53.284 -07 000000576 INF: FPGA: Recv ZDACR 37289
17-03-18 03:24:53.294 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.294 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:24:53.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.444 -07 000000462 INF: FPGA: Recv ZSGSRD 35865
17-03-18 03:24:53.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:24:53.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.454 -07 000000561 INF: FPGA: Recv ZSGSRD 35863
17-03-18 03:24:53.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.464 -07 000000579 INF: FPGA: Recv ZSGSRD 35864
17-03-18 03:24:53.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.474 -07 000000591 INF: FPGA: Recv ZSGSRD 35859
17-03-18 03:24:53.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.484 -07 000000626 INF: FPGA: Recv ZSGSRD 35864
17-03-18 03:24:53.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.494 -07 000000569 INF: FPGA: Recv ZSGSRD 35858
17-03-18 03:24:53.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.504 -07 000000512 INF: FPGA: Recv ZSGSRD 35861
17-03-18 03:24:53.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.514 -07 000000501 INF: FPGA: Recv ZSGSRD 35861
17-03-18 03:24:53.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.524 -07 000000618 INF: FPGA: Recv ZSGSRD 35859
17-03-18 03:24:53.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:53.534 -07 000000430 INF: FPGA: Recv ZSGSRD 35868
17-03-18 03:24:53.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.544 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:24:53.544 -07 000000502 INF: FPGA: Recv ZPIEZORD 31736
17-03-18 03:24:53.554 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:53.554 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.690 V. Piezo Error = -9.1 V.
17-03-18 03:24:53.554 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.7 um, Read 10 ADC samples: Avg = 35862 (-169.8 uncal um), Error = 0.9 uncal um, Median = 35862 (-169.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35858 (-169.8 uncal um), Max = 35868 (-169.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:24:53.554 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35862, posNoise = 6, negNoise = 4
17-03-18 03:24:53.554 -07 000000610 INF: Z Motor: After move to -0.170698, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:24:53.554 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:24:53.554 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:24:53.554 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:24:53.554 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:24:53.554 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:24:53.554 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:24:53.554 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:24:53.554 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:24:53.554 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:24:53.554 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:24:53.554 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:24:53.554 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:24:53.554 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:24:53.554 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:24:53.554 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:24:53.554 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:24:53.554 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:24:53.564 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:24:53.564 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:24:53.564 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:24:53.564 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:24:53.574 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 37466 150\n [Camera]
17-03-18 03:24:53.764 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:24:54.174 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:24:54.174 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:24:54.174 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:24:54.174 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:24:54.174 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:24:54.174 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:24:54.184 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:24:54.184 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 592591928, 0x0, 391868352) start.
17-03-18 03:24:54.184 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:24:54.184 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:24:54.364 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37466 790
17-03-18 03:24:54.514 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:24:54.554 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:24:54.554 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:24:54.554 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:54.564 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 592591928, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:24:54.564 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:24:54.564 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:54.564 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:24:54.564 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:24:54.564 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:24:54.574 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:24:54.714 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:24:54.714 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:24:54.714 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:24:54.714 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:24:54.714 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:24:54.714 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:24:54.714 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:24:54.714 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:24:54.714 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:24:54.714 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:24:54.904 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:24:54.904 -07 000000461 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:24:54.904 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 37466 150' command took 2 ms to send, 1324 ms to get response, and 1334 ms overall
17-03-18 03:24:54.904 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171186
17-03-18 03:24:54.904 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17119 mm
17-03-18 03:24:54.904 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:24:54.914 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:24:54.914 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 37396, sync = True, waitForSettling = False)
17-03-18 03:24:54.914 -07 000000606 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm
17-03-18 03:24:54.914 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:54.914 -07 000000629 INF: Z Motor: Moving to -0.171188 mm, started at -0.170708 mm, distance = -0.48 um
17-03-18 03:24:54.914 -07 000000424 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:24:54.924 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:54.924 -07 000000629 INF: FPGA: Xmit ZDACW 37396\n [Z Motor]
17-03-18 03:24:54.924 -07 000000606 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:54.924 -07 000000606 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:24:54.924 -07 000000606 INF: Y Motor: Moving 1340 steps-16
17-03-18 03:24:54.924 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:24:54.934 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:24:54.934 -07 000000629 INF: FPGA: 'ZDACW 37396' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:24:54.944 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:54.944 -07 000000569 INF: FPGA: Recv ZDACR 37396
17-03-18 03:24:54.954 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:24:54.954 -07 000000629 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 03:24:55.104 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 03:24:55.104 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:24:55.104 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:55.104 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 390 ms.
17-03-18 03:24:55.104 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:24:55.104 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:55.104 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:24:55.104 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:24:55.114 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:24:55.114 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:24:55.304 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:24:55.304 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:24:55.354 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:55.364 -07 000000626 INF: FPGA: Recv YRDPOS 129481
17-03-18 03:24:55.364 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:24:55.364 -07 000000606 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:55.364 -07 000000606 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:24:55.364 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.838 mm, average velocity = 2.164 mm/sec
17-03-18 03:24:55.634 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.956714,
17-03-18 03:24:56.314 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:56.314 -07 000000569 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:24:56.324 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.324 -07 000000606 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:56.344 -07 000000606 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:24:56.344 -07 000000606 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:24:56.344 -07 000000606 INF: Y Motor: Moved to 63.2236 after 1438 ms (table move)
17-03-18 03:24:56.354 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171188 mm (DAC = 37396)
17-03-18 03:24:56.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.354 -07 000000576 INF: FPGA: Recv ZSGSRD 35942
17-03-18 03:24:56.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:24:56.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.364 -07 000000606 INF: FPGA: Recv ZSGSRD 35941
17-03-18 03:24:56.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.374 -07 000000455 INF: FPGA: Recv ZSGSRD 35939
17-03-18 03:24:56.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.384 -07 000000606 INF: FPGA: Recv ZSGSRD 35938
17-03-18 03:24:56.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.394 -07 000000444 INF: FPGA: Recv ZSGSRD 35937
17-03-18 03:24:56.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.404 -07 000000576 INF: FPGA: Recv ZSGSRD 35945
17-03-18 03:24:56.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.414 -07 000000626 INF: FPGA: Recv ZSGSRD 35937
17-03-18 03:24:56.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.424 -07 000000424 INF: FPGA: Recv ZSGSRD 35932
17-03-18 03:24:56.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.434 -07 000000461 INF: FPGA: Recv ZSGSRD 35936
17-03-18 03:24:56.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.444 -07 000000618 INF: FPGA: Recv ZSGSRD 35942
17-03-18 03:24:56.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.454 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:24:56.454 -07 000000462 INF: FPGA: Recv ZPIEZORD 31851
17-03-18 03:24:56.464 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.464 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.706 V. Piezo Error = -9.0 V.
17-03-18 03:24:56.464 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.2 um, Read 10 ADC samples: Avg = 35939 (-170.3 uncal um), Error = 0.9 uncal um, Median = 35938 (-170.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35932 (-170.3 uncal um), Max = 35945 (-170.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:24:56.464 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35939, posNoise = 6, negNoise = 7
17-03-18 03:24:56.464 -07 000000610 INF: Z Motor: After move to -0.171188, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:24:56.464 -07 000000610 INF: Z Motor: Settle wait time = 1440 ms, measure time = 109 ms (allowed 150 ms), total time = 1549 ms
17-03-18 03:24:56.464 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:24:56.514 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 03:24:56.514 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:24:56.514 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.171203112173882. ----------
17-03-18 03:24:56.514 -07 000000610 INF: Cycle	112	Tile	5	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:24:56.514 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37219, sync = True, waitForSettling = True)
17-03-18 03:24:56.514 -07 000000610 INF: Z Motor: Moving to -0.170378 mm, started at -0.171203 mm, distance = 0.83 um
17-03-18 03:24:56.514 -07 000000610 INF: FPGA: Xmit ZDACW 37219\n [Z Motor]
17-03-18 03:24:56.514 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:24:56.524 -07 000000610 INF: FPGA: 'ZDACW 37219' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:24:56.524 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:56.524 -07 000000455 INF: FPGA: Recv ZDACR 37219
17-03-18 03:24:56.534 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.534 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:24:56.574 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:24:56.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:24:56.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.684 -07 000000561 INF: FPGA: Recv ZSGSRD 35815
17-03-18 03:24:56.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:24:56.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.694 -07 000000455 INF: FPGA: Recv ZSGSRD 35813
17-03-18 03:24:56.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.704 -07 000000569 INF: FPGA: Recv ZSGSRD 35813
17-03-18 03:24:56.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.714 -07 000000579 INF: FPGA: Recv ZSGSRD 35815
17-03-18 03:24:56.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.724 -07 000000461 INF: FPGA: Recv ZSGSRD 35816
17-03-18 03:24:56.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.734 -07 000000618 INF: FPGA: Recv ZSGSRD 35809
17-03-18 03:24:56.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.744 -07 000000455 INF: FPGA: Recv ZSGSRD 35808
17-03-18 03:24:56.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.754 -07 000000430 INF: FPGA: Recv ZSGSRD 35815
17-03-18 03:24:56.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.764 -07 000000618 INF: FPGA: Recv ZSGSRD 35814
17-03-18 03:24:56.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:24:56.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:56.774 -07 000000424 INF: FPGA: Recv ZSGSRD 35816
17-03-18 03:24:56.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.784 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:24:56.784 -07 000000629 INF: FPGA: Recv ZPIEZORD 31681
17-03-18 03:24:56.794 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:56.794 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.679 V. Piezo Error = -9.1 V.
17-03-18 03:24:56.794 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35813 (-169.5 uncal um), Error = 0.9 uncal um, Median = 35814 (-169.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35808 (-169.5 uncal um), Max = 35816 (-169.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:24:56.794 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35813, posNoise = 3, negNoise = 5
17-03-18 03:24:56.794 -07 000000610 INF: Z Motor: After move to -0.170378, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:24:56.794 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:24:56.794 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:24:56.794 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:24:56.794 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:24:56.794 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:24:56.794 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:24:56.794 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:24:56.794 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:24:56.794 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:24:56.794 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:24:56.794 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:24:56.794 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:24:56.794 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:24:56.794 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:24:56.804 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:24:56.804 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:24:56.804 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:24:56.814 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:24:56.814 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:24:56.814 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:24:56.814 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:24:56.824 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 37396 150\n [Camera]
17-03-18 03:24:57.014 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:24:57.424 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:24:57.424 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:24:57.424 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:24:57.424 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:24:57.424 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:24:57.424 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:24:57.424 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:24:57.424 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:24:57.424 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:24:57.424 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:24:57.614 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37396 790
17-03-18 03:24:57.764 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:24:57.804 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:24:57.804 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:24:57.804 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:57.804 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:24:57.804 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:24:57.804 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:57.804 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:24:57.804 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:24:57.814 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:24:57.814 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:24:57.964 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:24:57.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:24:57.964 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:24:57.964 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:24:57.964 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:24:57.964 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:24:57.964 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:24:57.964 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:24:57.964 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:24:57.964 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:24:58.154 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:24:58.154 -07 000000461 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:24:58.154 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 37396 150' command took 2 ms to send, 1325 ms to get response, and 1334 ms overall
17-03-18 03:24:58.154 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.170851
17-03-18 03:24:58.154 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17085 mm
17-03-18 03:24:58.154 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:24:58.164 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 37322, sync = True, waitForSettling = False)
17-03-18 03:24:58.164 -07 000000430 INF: Z Motor: Moving to -0.170849 mm, started at -0.170394 mm, distance = -0.46 um
17-03-18 03:24:58.164 -07 000000430 INF: FPGA: Xmit ZDACW 37322\n [Z Motor]
17-03-18 03:24:58.164 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:24:58.164 -07 000000629 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm
17-03-18 03:24:58.164 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:24:58.174 -07 000000430 INF: FPGA: 'ZDACW 37322' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:24:58.174 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:58.174 -07 000000569 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:24:58.184 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:24:58.184 -07 000000629 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:58.184 -07 000000629 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:24:58.184 -07 000000629 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:24:58.184 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:58.184 -07 000000576 INF: FPGA: Recv ZDACR 37322
17-03-18 03:24:58.194 -07 000000430 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:24:58.194 -07 000000430 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 03:24:58.194 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:24:58.354 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 03:24:58.354 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:24:58.354 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:58.354 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:24:58.354 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:24:58.354 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:24:58.354 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:24:58.354 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:24:58.354 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:24:58.364 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:24:58.564 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:24:58.564 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall
17-03-18 03:24:58.624 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:58.624 -07 000000579 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:24:58.634 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:24:58.634 -07 000000629 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:58.634 -07 000000629 INF: Y Motor: Position error before settling (table move) = -12 encoder counts (-0.006 mm)
17-03-18 03:24:58.634 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.839 mm, average velocity = 2.157 mm/sec
17-03-18 03:24:59.584 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:24:59.584 -07 000000455 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:24:59.594 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:24:59.594 -07 000000629 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:24:59.614 -07 000000629 INF: Y Motor: After move to 64.062607, error = -0.005966, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:24:59.614 -07 000000629 INF: Y Motor: Position error after settling (table move) = -12 encoder counts (-0.006 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:24:59.614 -07 000000629 INF: Y Motor: Moved to 64.0566 after 1454 ms (table move)
17-03-18 03:24:59.614 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170849 mm (DAC = 37322)
17-03-18 03:24:59.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.624 -07 000000467 INF: FPGA: Recv ZSGSRD 35891
17-03-18 03:24:59.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:24:59.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.634 -07 000000462 INF: FPGA: Recv ZSGSRD 35886
17-03-18 03:24:59.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.644 -07 000000461 INF: FPGA: Recv ZSGSRD 35878
17-03-18 03:24:59.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.654 -07 000000579 INF: FPGA: Recv ZSGSRD 35881
17-03-18 03:24:59.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.664 -07 000000606 INF: FPGA: Recv ZSGSRD 35880
17-03-18 03:24:59.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.674 -07 000000561 INF: FPGA: Recv ZSGSRD 35887
17-03-18 03:24:59.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.684 -07 000000591 INF: FPGA: Recv ZSGSRD 35889
17-03-18 03:24:59.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.694 -07 000000424 INF: FPGA: Recv ZSGSRD 35886
17-03-18 03:24:59.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.704 -07 000000579 INF: FPGA: Recv ZSGSRD 35890
17-03-18 03:24:59.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.714 -07 000000606 INF: FPGA: Recv ZSGSRD 35885
17-03-18 03:24:59.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:24:59.724 -07 000000561 INF: FPGA: Recv ZPIEZORD 31790
17-03-18 03:24:59.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.734 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.695 V. Piezo Error = -9.0 V.
17-03-18 03:24:59.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.8 um, Read 10 ADC samples: Avg = 35885 (-170.0 uncal um), Error = 0.9 uncal um, Median = 35886 (-170.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35878 (-169.9 uncal um), Max = 35891 (-170.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:24:59.734 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35885, posNoise = 6, negNoise = 7
17-03-18 03:24:59.734 -07 000000610 INF: Z Motor: After move to -0.170849, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:24:59.734 -07 000000610 INF: Z Motor: Settle wait time = 1457 ms, measure time = 111 ms (allowed 150 ms), total time = 1568 ms
17-03-18 03:24:59.734 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 03:24:59.774 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:24:59.774 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:24:59.774 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.056640625, Z-position -0.170856204718227. ----------
17-03-18 03:24:59.774 -07 000000610 INF: Cycle	112	Tile	6	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:24:59.774 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37146, sync = True, waitForSettling = True)
17-03-18 03:24:59.774 -07 000000610 INF: Z Motor: Moving to -0.170043 mm, started at -0.170856 mm, distance = 0.81 um
17-03-18 03:24:59.774 -07 000000610 INF: FPGA: Xmit ZDACW 37146\n [Z Motor]
17-03-18 03:24:59.774 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:24:59.784 -07 000000610 INF: FPGA: 'ZDACW 37146' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:24:59.784 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:24:59.784 -07 000000618 INF: FPGA: Recv ZDACR 37146
17-03-18 03:24:59.794 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.794 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:24:59.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.944 -07 000000461 INF: FPGA: Recv ZSGSRD 35765
17-03-18 03:24:59.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.954 -07 000000626 INF: FPGA: Recv ZSGSRD 35763
17-03-18 03:24:59.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.964 -07 000000462 INF: FPGA: Recv ZSGSRD 35757
17-03-18 03:24:59.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.974 -07 000000561 INF: FPGA: Recv ZSGSRD 35753
17-03-18 03:24:59.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.984 -07 000000591 INF: FPGA: Recv ZSGSRD 35756
17-03-18 03:24:59.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:24:59.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:24:59.994 -07 000000512 INF: FPGA: Recv ZSGSRD 35754
17-03-18 03:25:00.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:00.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:00.004 -07 000000430 INF: FPGA: Recv ZSGSRD 35761
17-03-18 03:25:00.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:00.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:00.014 -07 000000576 INF: FPGA: Recv ZSGSRD 35760
17-03-18 03:25:00.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:00.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:00.024 -07 000000501 INF: FPGA: Recv ZSGSRD 35763
17-03-18 03:25:00.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:00.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:00.034 -07 000000591 INF: FPGA: Recv ZSGSRD 35763
17-03-18 03:25:00.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:00.044 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:00.044 -07 000000424 INF: FPGA: Recv ZPIEZORD 31622
17-03-18 03:25:00.054 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:00.054 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.668 V. Piezo Error = -9.1 V.
17-03-18 03:25:00.054 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35760 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35760 (-169.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35753 (-169.1 uncal um), Max = 35765 (-169.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:25:00.054 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35760, posNoise = 5, negNoise = 7
17-03-18 03:25:00.054 -07 000000610 INF: Z Motor: After move to -0.170043, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:00.054 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:25:00.054 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:00.054 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:00.054 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:00.054 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:00.054 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:00.054 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:00.054 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:00.054 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:00.054 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:00.054 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:00.054 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:00.054 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:00.064 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:00.064 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:25:00.064 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:00.064 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:00.074 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:25:00.074 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:25:00.074 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:25:00.074 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:25:00.074 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 37322 150\n [Camera]
17-03-18 03:25:00.284 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:00.694 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:25:00.694 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:25:00.694 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:00.694 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:00.694 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:25:00.694 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:25:00.694 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:25:00.694 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:00.694 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:00.694 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:25:00.884 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37322 790
17-03-18 03:25:00.994 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.99219,
17-03-18 03:25:01.034 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:01.094 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 03:25:01.094 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:25:01.094 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:01.104 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:25:01.104 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms.
17-03-18 03:25:01.104 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 03:25:01.104 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:25:01.104 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:01.104 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:25:01.114 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 416 ms.
17-03-18 03:25:01.224 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:01.224 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:01.224 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:01.224 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:01.224 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:25:01.224 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:01.224 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:01.234 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:01.234 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:01.234 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 03:25:01.414 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:25:01.414 -07 000000629 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:01.414 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 37322 150' command took 2 ms to send, 1328 ms to get response, and 1338 ms overall
17-03-18 03:25:01.424 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:25:01.424 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.056640625, Z-Position -0.170053178200507. ------
17-03-18 03:25:01.424 -07 000000576 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:25:01.424 -07 000000455 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17650 mm
17-03-18 03:25:01.424 -07 000000455 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:01.424 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:25:01.424 -07 000000618 INF: Y Motor: Moving to 64.8926 mm, started at 64.0566 mm, delta = 0.8360 mm
17-03-18 03:25:01.424 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:25:01.434 -07 000000576 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:01.434 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:01.434 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 38556, sync = True, waitForSettling = False)
17-03-18 03:25:01.434 -07 000000512 INF: Z Motor: Moving to -0.176498 mm, started at -0.170053 mm, distance = -6.44 um
17-03-18 03:25:01.434 -07 000000502 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:25:01.444 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:01.444 -07 000000618 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:01.444 -07 000000618 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:01.444 -07 000000618 INF: Y Motor: Moving 1338 steps-12
17-03-18 03:25:01.444 -07 000000576 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:25:01.454 -07 000000512 INF: FPGA: Xmit ZDACW 38556\n [Z Motor]
17-03-18 03:25:01.454 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:25:01.464 -07 000000512 INF: FPGA: 'ZDACW 38556' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:25:01.464 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:01.474 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:01.474 -07 000000579 INF: FPGA: Recv ZDACR 38556
17-03-18 03:25:01.484 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:01.484 -07 000000512 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-18 03:25:01.574 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:01.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:01.604 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:25:01.604 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:25:01.604 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:01.604 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:01.604 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:25:01.604 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:25:01.604 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:01.614 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:01.614 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:25:01.614 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:25:01.644 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:25:01.644 -07 000000576 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 194 ms to get response, and 213 ms overall
17-03-18 03:25:01.834 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:25:01.834 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 398 ms overall
17-03-18 03:25:01.884 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:01.894 -07 000000502 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:25:01.894 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:25:01.894 -07 000000618 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:01.894 -07 000000618 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:25:01.894 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.836 mm, average velocity = 2.100 mm/sec
17-03-18 03:25:02.844 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:02.844 -07 000000461 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:25:02.854 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:02.854 -07 000000618 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:02.884 -07 000000618 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:02.884 -07 000000618 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:02.884 -07 000000618 INF: Y Motor: Moved to 64.8784 after 1452 ms (table move)
17-03-18 03:25:02.884 -07 000000455 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176498 mm (DAC = 38556)
17-03-18 03:25:02.884 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:02.884 -07 000000626 INF: FPGA: Recv ZSGSRD 36763
17-03-18 03:25:02.894 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:02.894 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:02.894 -07 000000576 INF: FPGA: Recv ZSGSRD 36761
17-03-18 03:25:02.904 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:02.904 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:02.904 -07 000000512 INF: FPGA: Recv ZSGSRD 36770
17-03-18 03:25:02.914 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:02.914 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:02.914 -07 000000502 INF: FPGA: Recv ZSGSRD 36765
17-03-18 03:25:02.924 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:02.924 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:02.924 -07 000000569 INF: FPGA: Recv ZSGSRD 36760
17-03-18 03:25:02.934 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:02.934 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:02.934 -07 000000424 INF: FPGA: Recv ZSGSRD 36761
17-03-18 03:25:02.944 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:02.944 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:02.944 -07 000000467 INF: FPGA: Recv ZSGSRD 36763
17-03-18 03:25:02.954 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:02.954 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:02.954 -07 000000629 INF: FPGA: Recv ZSGSRD 36762
17-03-18 03:25:02.964 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:02.964 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:02.964 -07 000000462 INF: FPGA: Recv ZSGSRD 36758
17-03-18 03:25:02.974 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:02.974 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:02.974 -07 000000569 INF: FPGA: Recv ZSGSRD 36760
17-03-18 03:25:02.984 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:02.984 -07 000000455 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:02.984 -07 000000606 INF: FPGA: Recv ZPIEZORD 32916
17-03-18 03:25:02.994 -07 000000455 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:02.994 -07 000000455 INF: Z Motor: Piezo is near 50.3 V (nominally 0 to 100 V), expect near 58.8 V, since DAC is at 5.883 V. Piezo Error = -8.5 V.
17-03-18 03:25:02.994 -07 000000455 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.5 um, Read 10 ADC samples: Avg = 36762 (-175.6 uncal um), Error = 0.9 uncal um, Median = 36762 (-175.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36758 (-175.6 uncal um), Max = 36770 (-175.7 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:25:02.994 -07 000000455 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36762, posNoise = 8, negNoise = 4
17-03-18 03:25:02.994 -07 000000455 INF: Z Motor: After move to -0.176498, error = 0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:02.994 -07 000000455 INF: Z Motor: Settle wait time = 1455 ms, measure time = 105 ms (allowed 150 ms), total time = 1560 ms
17-03-18 03:25:02.994 -07 000000455 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:03.044 -07 000000455 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1613 ms
17-03-18 03:25:03.044 -07 000000455 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:03.044 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:03.044 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:03.044 -07 000000569 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:25:03.044 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:03.044 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:03.044 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:03.044 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:03.044 -07 000000569 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:25:03.054 -07 000000569 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:25:03.054 -07 000000569 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:25:03.064 -07 000000569 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 03:25:03.064 -07 000000569 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-18 03:25:03.064 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:25:03.104 -07 000000590 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:25:03.404 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:25:03.404 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:25:03.414 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:25:03.414 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1493765392, 0x0, 559484976) start.
17-03-18 03:25:03.444 -07 000000501 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:25:03.444 -07 000000569 INF: FPGA: Recv CAMSNAP
17-03-18 03:25:03.444 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 379 ms to get response, and 384 ms overall
17-03-18 03:25:03.534 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1493765392, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 03:25:03.534 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:03.534 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 03:25:03.534 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 03:25:03.644 -07 000000461 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:25:03.644 -07 000000576 INF: Autofocus start
17-03-18 03:25:03.644 -07 000000576 INF: MeasureProfile start
17-03-18 03:25:03.644 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:25:03.654 -07 000000461 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:25:03.654 -07 000000461 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:25:03.654 -07 000000576 INF: MeasureProfile done
17-03-18 03:25:03.654 -07 000000576 INF: X=32  Z correction [um]=0.09220707
17-03-18 03:25:03.654 -07 000000576 INF: Autofocus finished
17-03-18 03:25:03.854 -07 000000430 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:25:03.854 -07 000000461 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:25:03.854 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.176490238766551. ----------
17-03-18 03:25:03.854 -07 000000610 INF: Cycle	112	Tile	7	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:03.864 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37089, sync = True, waitForSettling = True)
17-03-18 03:25:03.864 -07 000000610 INF: Z Motor: Moving to -0.169783 mm, started at -0.176490 mm, distance = 6.71 um
17-03-18 03:25:03.864 -07 000000610 INF: FPGA: Xmit ZDACW 37089\n [Z Motor]
17-03-18 03:25:03.864 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:25:03.874 -07 000000610 INF: FPGA: 'ZDACW 37089' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:25:03.874 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:03.874 -07 000000579 INF: FPGA: Recv ZDACR 37089
17-03-18 03:25:03.884 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:03.884 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:04.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:04.034 -07 000000606 INF: FPGA: Recv ZSGSRD 35727
17-03-18 03:25:04.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:04.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:04.044 -07 000000455 INF: FPGA: Recv ZSGSRD 35719
17-03-18 03:25:04.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:04.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:04.054 -07 000000569 INF: FPGA: Recv ZSGSRD 35718
17-03-18 03:25:04.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:04.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:04.064 -07 000000462 INF: FPGA: Recv ZSGSRD 35721
17-03-18 03:25:04.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:04.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:04.074 -07 000000561 INF: FPGA: Recv ZSGSRD 35721
17-03-18 03:25:04.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:04.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:04.084 -07 000000591 INF: FPGA: Recv ZSGSRD 35723
17-03-18 03:25:04.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:04.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:04.094 -07 000000424 INF: FPGA: Recv ZSGSRD 35711
17-03-18 03:25:04.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:04.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:04.104 -07 000000618 INF: FPGA: Recv ZSGSRD 35715
17-03-18 03:25:04.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:04.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:04.114 -07 000000467 INF: FPGA: Recv ZSGSRD 35716
17-03-18 03:25:04.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:04.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:04.124 -07 000000512 INF: FPGA: Recv ZSGSRD 35717
17-03-18 03:25:04.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:04.134 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:04.134 -07 000000502 INF: FPGA: Recv ZPIEZORD 31522
17-03-18 03:25:04.144 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:04.144 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.659 V. Piezo Error = -9.3 V.
17-03-18 03:25:04.144 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35719 (-168.9 uncal um), Error = 0.9 uncal um, Median = 35718 (-168.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35711 (-168.9 uncal um), Max = 35727 (-169.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:25:04.144 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35719, posNoise = 8, negNoise = 8
17-03-18 03:25:04.144 -07 000000610 INF: Z Motor: After move to -0.169783, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:04.144 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:25:04.144 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:04.144 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:04.144 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:04.144 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:04.144 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:04.144 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:04.144 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:04.144 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:04.144 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:04.144 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:04.144 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:04.144 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:04.154 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:04.154 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:04.154 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:25:04.154 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:04.164 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:25:04.164 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:25:04.164 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:25:04.164 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:25:04.164 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 37265 150\n [Camera]
17-03-18 03:25:04.364 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:04.774 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:04.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:04.774 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:04.774 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:04.774 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:04.774 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:04.774 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:04.774 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 03:25:04.774 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:04.774 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 03:25:04.964 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37265 790
17-03-18 03:25:05.114 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:05.154 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:25:05.154 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:25:05.154 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:05.154 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:25:05.154 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:25:05.154 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:05.154 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:05.154 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:05.154 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:25:05.164 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:25:05.304 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:05.304 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:05.304 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:05.304 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:05.304 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-18 03:25:05.314 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:05.314 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:05.314 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:05.314 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:05.314 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-18 03:25:05.494 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:25:05.504 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:05.504 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 37265 150' command took 2 ms to send, 1330 ms to get response, and 1334 ms overall
17-03-18 03:25:05.504 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.170223
17-03-18 03:25:05.504 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17022 mm
17-03-18 03:25:05.504 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:05.504 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:25:05.504 -07 000000512 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm
17-03-18 03:25:05.504 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:05.504 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 37185, sync = True, waitForSettling = False)
17-03-18 03:25:05.504 -07 000000569 INF: Z Motor: Moving to -0.170222 mm, started at -0.169790 mm, distance = -0.43 um
17-03-18 03:25:05.514 -07 000000461 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:25:05.514 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:05.514 -07 000000512 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:05.514 -07 000000512 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:05.514 -07 000000512 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:25:05.514 -07 000000569 INF: FPGA: Xmit ZDACW 37185\n [Z Motor]
17-03-18 03:25:05.514 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:25:05.524 -07 000000569 INF: FPGA: 'ZDACW 37185' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:25:05.524 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:05.534 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:05.534 -07 000000629 INF: FPGA: Recv ZDACR 37185
17-03-18 03:25:05.544 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:05.544 -07 000000569 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:25:05.694 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:25:05.694 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:25:05.694 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:05.694 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:25:05.694 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:25:05.694 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:05.704 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:05.704 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:25:05.704 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:25:05.704 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:25:05.894 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 03:25:05.894 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:25:05.954 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:05.954 -07 000000424 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:25:05.964 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:25:05.964 -07 000000512 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:05.964 -07 000000512 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:25:05.964 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.844 mm, average velocity = 2.181 mm/sec
17-03-18 03:25:06.354 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.027603,
17-03-18 03:25:06.574 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:06.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:06.914 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:06.914 -07 000000444 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:25:06.924 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:06.924 -07 000000512 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:06.954 -07 000000512 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:06.954 -07 000000512 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:06.954 -07 000000512 INF: Y Motor: Moved to 65.7134 after 1448 ms (table move)
17-03-18 03:25:06.964 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170222 mm (DAC = 37185)
17-03-18 03:25:06.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:06.964 -07 000000461 INF: FPGA: Recv ZSGSRD 35788
17-03-18 03:25:06.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:06.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:06.974 -07 000000626 INF: FPGA: Recv ZSGSRD 35790
17-03-18 03:25:06.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:06.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:06.984 -07 000000462 INF: FPGA: Recv ZSGSRD 35788
17-03-18 03:25:06.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:06.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:06.994 -07 000000618 INF: FPGA: Recv ZSGSRD 35785
17-03-18 03:25:07.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.004 -07 000000430 INF: FPGA: Recv ZSGSRD 35786
17-03-18 03:25:07.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.014 -07 000000501 INF: FPGA: Recv ZSGSRD 35789
17-03-18 03:25:07.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.024 -07 000000424 INF: FPGA: Recv ZSGSRD 35792
17-03-18 03:25:07.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.034 -07 000000462 INF: FPGA: Recv ZSGSRD 35789
17-03-18 03:25:07.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.044 -07 000000467 INF: FPGA: Recv ZSGSRD 35790
17-03-18 03:25:07.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.054 -07 000000430 INF: FPGA: Recv ZSGSRD 35790
17-03-18 03:25:07.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.064 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:07.064 -07 000000501 INF: FPGA: Recv ZPIEZORD 31600
17-03-18 03:25:07.074 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.074 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.674 V. Piezo Error = -9.2 V.
17-03-18 03:25:07.074 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.2 um, Read 10 ADC samples: Avg = 35789 (-169.4 uncal um), Error = 0.9 uncal um, Median = 35789 (-169.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35785 (-169.3 uncal um), Max = 35792 (-169.4 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:25:07.074 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35789, posNoise = 3, negNoise = 4
17-03-18 03:25:07.074 -07 000000610 INF: Z Motor: After move to -0.170222, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:07.074 -07 000000610 INF: Z Motor: Settle wait time = 1452 ms, measure time = 110 ms (allowed 150 ms), total time = 1562 ms
17-03-18 03:25:07.074 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:07.114 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms
17-03-18 03:25:07.114 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:07.114 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.170239480352618. ----------
17-03-18 03:25:07.114 -07 000000610 INF: Cycle	112	Tile	8	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:07.114 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37008, sync = True, waitForSettling = True)
17-03-18 03:25:07.114 -07 000000610 INF: Z Motor: Moving to -0.169412 mm, started at -0.170239 mm, distance = 0.83 um
17-03-18 03:25:07.114 -07 000000610 INF: FPGA: Xmit ZDACW 37008\n [Z Motor]
17-03-18 03:25:07.114 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:25:07.124 -07 000000610 INF: FPGA: 'ZDACW 37008' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:25:07.124 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:07.124 -07 000000501 INF: FPGA: Recv ZDACR 37008
17-03-18 03:25:07.134 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.134 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:07.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.284 -07 000000467 INF: FPGA: Recv ZSGSRD 35662
17-03-18 03:25:07.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.294 -07 000000430 INF: FPGA: Recv ZSGSRD 35664
17-03-18 03:25:07.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.304 -07 000000561 INF: FPGA: Recv ZSGSRD 35659
17-03-18 03:25:07.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.314 -07 000000590 INF: FPGA: Recv ZSGSRD 35660
17-03-18 03:25:07.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.324 -07 000000576 INF: FPGA: Recv ZSGSRD 35660
17-03-18 03:25:07.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.334 -07 000000569 INF: FPGA: Recv ZSGSRD 35658
17-03-18 03:25:07.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.344 -07 000000606 INF: FPGA: Recv ZSGSRD 35670
17-03-18 03:25:07.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.354 -07 000000618 INF: FPGA: Recv ZSGSRD 35660
17-03-18 03:25:07.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.364 -07 000000512 INF: FPGA: Recv ZSGSRD 35663
17-03-18 03:25:07.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:07.374 -07 000000606 INF: FPGA: Recv ZSGSRD 35662
17-03-18 03:25:07.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.384 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:07.384 -07 000000618 INF: FPGA: Recv ZPIEZORD 31453
17-03-18 03:25:07.394 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:07.394 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.647 V. Piezo Error = -9.3 V.
17-03-18 03:25:07.394 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.4 um, Read 10 ADC samples: Avg = 35662 (-168.6 uncal um), Error = 0.9 uncal um, Median = 35661 (-168.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35658 (-168.5 uncal um), Max = 35670 (-168.6 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:25:07.394 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35662, posNoise = 8, negNoise = 4
17-03-18 03:25:07.394 -07 000000610 INF: Z Motor: After move to -0.169412, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:07.394 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:25:07.394 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:07.394 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:07.394 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:07.394 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:07.394 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:07.394 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:07.394 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:07.394 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:07.394 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:25:07.394 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:07.394 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:07.394 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:07.404 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:07.404 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:07.404 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:25:07.404 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:07.414 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:25:07.414 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:25:07.414 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:25:07.414 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:25:07.414 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 37185 150\n [Camera]
17-03-18 03:25:07.614 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:08.014 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:08.014 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:08.014 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:08.014 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:08.014 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start.
17-03-18 03:25:08.024 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:08.024 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:08.024 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:08.024 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:08.024 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-18 03:25:08.214 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37185 790
17-03-18 03:25:08.354 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:08.404 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 03:25:08.404 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:25:08.404 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:08.414 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 390 ms.
17-03-18 03:25:08.414 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:25:08.414 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:08.414 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:25:08.414 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:25:08.414 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:25:08.424 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:25:08.554 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:08.554 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:08.554 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:08.554 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:08.554 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start.
17-03-18 03:25:08.554 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:08.554 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:08.554 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:08.554 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:08.554 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start.
17-03-18 03:25:08.744 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:25:08.744 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:08.744 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 37185 150' command took 2 ms to send, 1327 ms to get response, and 1334 ms overall
17-03-18 03:25:08.744 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.169898
17-03-18 03:25:08.754 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.16990 mm
17-03-18 03:25:08.754 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:08.754 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 37114, sync = True, waitForSettling = False)
17-03-18 03:25:08.754 -07 000000501 INF: Z Motor: Moving to -0.169897 mm, started at -0.169424 mm, distance = -0.47 um
17-03-18 03:25:08.754 -07 000000501 INF: FPGA: Xmit ZDACW 37114\n [Z Motor]
17-03-18 03:25:08.754 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:25:08.754 -07 000000461 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm
17-03-18 03:25:08.754 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:25:08.764 -07 000000501 INF: FPGA: 'ZDACW 37114' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:25:08.764 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:08.764 -07 000000576 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:25:08.774 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:25:08.774 -07 000000461 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:08.774 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:08.774 -07 000000561 INF: FPGA: Recv ZDACR 37114
17-03-18 03:25:08.774 -07 000000461 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:08.774 -07 000000461 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:25:08.784 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:08.784 -07 000000501 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 03:25:08.784 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:08.934 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:25:08.934 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:25:08.934 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:08.934 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:25:08.934 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:25:08.934 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:08.944 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:25:08.944 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:25:08.944 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:25:08.954 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:25:09.154 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:25:09.154 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 379 ms overall
17-03-18 03:25:09.204 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:09.204 -07 000000502 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:25:09.214 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:25:09.214 -07 000000461 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:09.214 -07 000000461 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:25:09.214 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 379 ms, distance = 0.839 mm, average velocity = 2.214 mm/sec
17-03-18 03:25:10.164 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:10.164 -07 000000629 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:25:10.174 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:10.174 -07 000000461 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:10.204 -07 000000461 INF: Y Motor: After move to 66.552605, error = -0.014030, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:10.204 -07 000000461 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:10.204 -07 000000461 INF: Y Motor: Moved to 66.5386 after 1447 ms (table move)
17-03-18 03:25:10.204 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169897 mm (DAC = 37114)
17-03-18 03:25:10.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.204 -07 000000569 INF: FPGA: Recv ZSGSRD 35737
17-03-18 03:25:10.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:25:10.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.214 -07 000000467 INF: FPGA: Recv ZSGSRD 35739
17-03-18 03:25:10.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.224 -07 000000576 INF: FPGA: Recv ZSGSRD 35742
17-03-18 03:25:10.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.234 -07 000000561 INF: FPGA: Recv ZSGSRD 35737
17-03-18 03:25:10.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.244 -07 000000501 INF: FPGA: Recv ZSGSRD 35732
17-03-18 03:25:10.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.254 -07 000000424 INF: FPGA: Recv ZSGSRD 35738
17-03-18 03:25:10.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.264 -07 000000618 INF: FPGA: Recv ZSGSRD 35734
17-03-18 03:25:10.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.274 -07 000000591 INF: FPGA: Recv ZSGSRD 35734
17-03-18 03:25:10.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.284 -07 000000590 INF: FPGA: Recv ZSGSRD 35739
17-03-18 03:25:10.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.294 -07 000000502 INF: FPGA: Recv ZSGSRD 35741
17-03-18 03:25:10.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.304 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:10.304 -07 000000579 INF: FPGA: Recv ZPIEZORD 31567
17-03-18 03:25:10.314 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.314 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.663 V. Piezo Error = -9.2 V.
17-03-18 03:25:10.314 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.9 um, Read 10 ADC samples: Avg = 35737 (-169.0 uncal um), Error = 0.9 uncal um, Median = 35738 (-169.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35732 (-169.0 uncal um), Max = 35742 (-169.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:25:10.314 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35737, posNoise = 5, negNoise = 5
17-03-18 03:25:10.314 -07 000000610 INF: Z Motor: After move to -0.169897, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:10.314 -07 000000610 INF: Z Motor: Settle wait time = 1451 ms, measure time = 106 ms (allowed 150 ms), total time = 1557 ms
17-03-18 03:25:10.314 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:10.364 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1610 ms
17-03-18 03:25:10.364 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:10.364 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53857421875, Z-position -0.169905421321246. ----------
17-03-18 03:25:10.364 -07 000000610 INF: Cycle	112	Tile	9	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:10.364 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36938, sync = True, waitForSettling = True)
17-03-18 03:25:10.364 -07 000000610 INF: Z Motor: Moving to -0.169091 mm, started at -0.169905 mm, distance = 0.81 um
17-03-18 03:25:10.364 -07 000000610 INF: FPGA: Xmit ZDACW 36938\n [Z Motor]
17-03-18 03:25:10.364 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:25:10.374 -07 000000610 INF: FPGA: 'ZDACW 36938' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:10.374 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:10.374 -07 000000626 INF: FPGA: Recv ZDACR 36938
17-03-18 03:25:10.384 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.384 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:10.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.534 -07 000000424 INF: FPGA: Recv ZSGSRD 35618
17-03-18 03:25:10.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:10.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.544 -07 000000455 INF: FPGA: Recv ZSGSRD 35617
17-03-18 03:25:10.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.554 -07 000000591 INF: FPGA: Recv ZSGSRD 35618
17-03-18 03:25:10.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.564 -07 000000629 INF: FPGA: Recv ZSGSRD 35607
17-03-18 03:25:10.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.574 -07 000000590 INF: FPGA: Recv ZSGSRD 35612
17-03-18 03:25:10.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.584 -07 000000569 INF: FPGA: Recv ZSGSRD 35616
17-03-18 03:25:10.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.594 -07 000000561 INF: FPGA: Recv ZSGSRD 35609
17-03-18 03:25:10.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.604 -07 000000591 INF: FPGA: Recv ZSGSRD 35609
17-03-18 03:25:10.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.624 -07 000000424 INF: FPGA: Recv ZSGSRD 35617
17-03-18 03:25:10.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:10.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:10.634 -07 000000430 INF: FPGA: Recv ZSGSRD 35612
17-03-18 03:25:10.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:10.644 -07 000000502 INF: FPGA: Recv ZPIEZORD 31401
17-03-18 03:25:10.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:10.654 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.636 V. Piezo Error = -9.3 V.
17-03-18 03:25:10.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35614 (-168.2 uncal um), Error = 0.8 uncal um, Median = 35614 (-168.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35607 (-168.2 uncal um), Max = 35618 (-168.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:25:10.654 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35614, posNoise = 4, negNoise = 7
17-03-18 03:25:10.654 -07 000000610 INF: Z Motor: After move to -0.169091, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:10.654 -07 000000610 INF: Z Motor: MoveAbsStepped took 285 ms)
17-03-18 03:25:10.654 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:10.654 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:10.654 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:10.654 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:10.654 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:10.654 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:10.654 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:10.654 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:10.654 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:10.654 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:10.654 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:10.654 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:10.664 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:10.664 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:10.664 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:25:10.664 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:10.674 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:25:10.674 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:25:10.674 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 03:25:10.674 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:25:10.674 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 37114 150\n [Camera]
17-03-18 03:25:10.874 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:11.274 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:11.274 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:11.284 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:11.284 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:11.284 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-18 03:25:11.284 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:11.284 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:11.284 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:11.284 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:11.284 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-18 03:25:11.474 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37114 790
17-03-18 03:25:11.574 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:11.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:11.624 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:11.664 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:25:11.664 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:25:11.664 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:11.664 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:25:11.664 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:25:11.664 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:11.664 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:11.664 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:25:11.664 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:11.674 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:25:11.714 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.014009,
17-03-18 03:25:11.814 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:11.814 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:11.814 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:11.814 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:11.814 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) start.
17-03-18 03:25:11.824 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:11.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:11.824 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:11.824 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:11.824 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-18 03:25:12.004 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:25:12.004 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:12.014 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 37114 150' command took 2 ms to send, 1329 ms to get response, and 1334 ms overall
17-03-18 03:25:12.014 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.169931
17-03-18 03:25:12.014 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.16993 mm
17-03-18 03:25:12.014 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:12.014 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 37121, sync = True, waitForSettling = False)
17-03-18 03:25:12.014 -07 000000502 INF: Z Motor: Moving to -0.169929 mm, started at -0.169115 mm, distance = -0.81 um
17-03-18 03:25:12.014 -07 000000502 INF: FPGA: Xmit ZDACW 37121\n [Z Motor]
17-03-18 03:25:12.014 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:25:12.014 -07 000000590 INF: Y Motor: Moving to 67.3826 mm, started at 66.5386 mm, delta = 0.8440 mm
17-03-18 03:25:12.014 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:25:12.024 -07 000000502 INF: FPGA: 'ZDACW 37121' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:25:12.024 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:12.024 -07 000000569 INF: FPGA: Recv ZDACR 37121
17-03-18 03:25:12.034 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:12.034 -07 000000502 INF: Z Motor: MoveAbsStepped took 13 ms (did NOT wait for settling yet))
17-03-18 03:25:12.034 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:12.034 -07 000000430 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:25:12.044 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-18 03:25:12.044 -07 000000590 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:12.044 -07 000000590 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:12.044 -07 000000590 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:25:12.044 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:12.204 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 03:25:12.214 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) end. Duration was 390 ms.
17-03-18 03:25:12.214 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:25:12.214 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:12.214 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:25:12.214 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:12.214 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:25:12.214 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:25:12.214 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:25:12.224 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-18 03:25:12.414 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 03:25:12.414 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:25:12.464 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:12.474 -07 000000606 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:25:12.484 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:12.484 -07 000000590 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:12.484 -07 000000590 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm)
17-03-18 03:25:12.484 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.233 mm/sec
17-03-18 03:25:13.434 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:13.434 -07 000000467 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:25:13.444 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:13.444 -07 000000590 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:13.464 -07 000000590 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:13.474 -07 000000590 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:13.474 -07 000000590 INF: Y Motor: Moved to 67.3716 after 1452 ms (table move)
17-03-18 03:25:13.474 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169929 mm (DAC = 37121)
17-03-18 03:25:13.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.474 -07 000000462 INF: FPGA: Recv ZSGSRD 35733
17-03-18 03:25:13.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:25:13.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.484 -07 000000606 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:25:13.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.494 -07 000000455 INF: FPGA: Recv ZSGSRD 35743
17-03-18 03:25:13.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.504 -07 000000467 INF: FPGA: Recv ZSGSRD 35735
17-03-18 03:25:13.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.514 -07 000000444 INF: FPGA: Recv ZSGSRD 35737
17-03-18 03:25:13.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.524 -07 000000569 INF: FPGA: Recv ZSGSRD 35739
17-03-18 03:25:13.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.534 -07 000000502 INF: FPGA: Recv ZSGSRD 35746
17-03-18 03:25:13.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.544 -07 000000626 INF: FPGA: Recv ZSGSRD 35743
17-03-18 03:25:13.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.554 -07 000000467 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:25:13.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.564 -07 000000561 INF: FPGA: Recv ZSGSRD 35747
17-03-18 03:25:13.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.574 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:13.574 -07 000000462 INF: FPGA: Recv ZPIEZORD 31572
17-03-18 03:25:13.584 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.584 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.664 V. Piezo Error = -9.2 V.
17-03-18 03:25:13.584 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.9 um, Read 10 ADC samples: Avg = 35741 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35743 (-169.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35733 (-169.0 uncal um), Max = 35747 (-169.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:25:13.584 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35741, posNoise = 6, negNoise = 8
17-03-18 03:25:13.584 -07 000000610 INF: Z Motor: After move to -0.169929, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:13.584 -07 000000610 INF: Z Motor: Settle wait time = 1455 ms, measure time = 108 ms (allowed 150 ms), total time = 1563 ms
17-03-18 03:25:13.584 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:13.634 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1617 ms
17-03-18 03:25:13.634 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:13.634 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.169931118169813. ----------
17-03-18 03:25:13.634 -07 000000610 INF: Cycle	112	Tile	10	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:13.634 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36945, sync = True, waitForSettling = True)
17-03-18 03:25:13.634 -07 000000610 INF: Z Motor: Moving to -0.169123 mm, started at -0.169931 mm, distance = 0.81 um
17-03-18 03:25:13.634 -07 000000610 INF: FPGA: Xmit ZDACW 36945\n [Z Motor]
17-03-18 03:25:13.634 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:25:13.644 -07 000000610 INF: FPGA: 'ZDACW 36945' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:13.644 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:13.644 -07 000000579 INF: FPGA: Recv ZDACR 36945
17-03-18 03:25:13.654 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.654 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:13.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.804 -07 000000569 INF: FPGA: Recv ZSGSRD 35617
17-03-18 03:25:13.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.814 -07 000000561 INF: FPGA: Recv ZSGSRD 35611
17-03-18 03:25:13.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.824 -07 000000461 INF: FPGA: Recv ZSGSRD 35616
17-03-18 03:25:13.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.834 -07 000000576 INF: FPGA: Recv ZSGSRD 35614
17-03-18 03:25:13.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.844 -07 000000629 INF: FPGA: Recv ZSGSRD 35618
17-03-18 03:25:13.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.854 -07 000000424 INF: FPGA: Recv ZSGSRD 35617
17-03-18 03:25:13.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.864 -07 000000444 INF: FPGA: Recv ZSGSRD 35623
17-03-18 03:25:13.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.874 -07 000000462 INF: FPGA: Recv ZSGSRD 35617
17-03-18 03:25:13.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.884 -07 000000502 INF: FPGA: Recv ZSGSRD 35613
17-03-18 03:25:13.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:13.894 -07 000000590 INF: FPGA: Recv ZSGSRD 35615
17-03-18 03:25:13.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.904 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:13.904 -07 000000569 INF: FPGA: Recv ZPIEZORD 31411
17-03-18 03:25:13.914 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:13.914 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.637 V. Piezo Error = -9.3 V.
17-03-18 03:25:13.914 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35616 (-168.3 uncal um), Error = 0.9 uncal um, Median = 35616 (-168.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35611 (-168.2 uncal um), Max = 35623 (-168.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:25:13.914 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35616, posNoise = 7, negNoise = 5
17-03-18 03:25:13.914 -07 000000610 INF: Z Motor: After move to -0.169123, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:13.914 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:25:13.914 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:13.914 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:13.914 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:13.914 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:13.914 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:13.914 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:13.914 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:13.914 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:13.914 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:13.914 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:13.914 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:13.914 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:13.924 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:25:13.924 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:13.924 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:25:13.924 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:13.934 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:25:13.934 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:25:13.934 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:25:13.934 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:25:13.944 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 37121 150\n [Camera]
17-03-18 03:25:14.134 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:14.544 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:14.544 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:14.544 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:14.544 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:14.544 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:14.544 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:14.544 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) start.
17-03-18 03:25:14.544 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:14.704 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:14.704 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) start.
17-03-18 03:25:14.734 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37121 790
17-03-18 03:25:14.884 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:14.944 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 03:25:14.944 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:25:14.944 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:14.944 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:14.944 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:25:15.064 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) end. Duration was 366 ms.
17-03-18 03:25:15.064 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 366 ms.
17-03-18 03:25:15.064 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:15.074 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:15.074 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 529 ms.
17-03-18 03:25:15.084 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:15.084 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:15.084 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:15.084 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:15.084 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:15.084 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:15.084 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:15.094 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:25:15.094 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:15.094 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:25:15.274 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:25:15.274 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:15.274 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 37121 150' command took 2 ms to send, 1324 ms to get response, and 1334 ms overall
17-03-18 03:25:15.274 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:25:15.274 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.37158203125, Z-Position -0.169128091652093. ------
17-03-18 03:25:15.284 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:25:15.284 -07 000000512 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.17542 mm
17-03-18 03:25:15.284 -07 000000512 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:15.284 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:25:15.294 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:25:15.294 -07 000000455 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:25:15.294 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:25:15.294 -07 000000462 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-18 03:25:15.294 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 38321, sync = True, waitForSettling = False)
17-03-18 03:25:15.294 -07 000000591 INF: Z Motor: Moving to -0.175422 mm, started at -0.169128 mm, distance = -6.29 um
17-03-18 03:25:15.304 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:15.304 -07 000000461 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:25:15.314 -07 000000591 INF: FPGA: Xmit ZDACW 38321\n [Z Motor]
17-03-18 03:25:15.314 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:25:15.314 -07 000000462 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:15.314 -07 000000462 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:15.314 -07 000000462 INF: Y Motor: Moving 1346 steps-23
17-03-18 03:25:15.314 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:25:15.324 -07 000000591 INF: FPGA: 'ZDACW 38321' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:25:15.324 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:15.334 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:15.334 -07 000000430 INF: FPGA: Recv ZDACR 38321
17-03-18 03:25:15.344 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:15.344 -07 000000591 INF: Z Motor: MoveAbsStepped took 45 ms (did NOT wait for settling yet))
17-03-18 03:25:15.474 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:25:15.474 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:25:15.474 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:15.474 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:25:15.474 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:25:15.474 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:15.474 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:15.474 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:25:15.474 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:15.484 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:25:15.494 -07 000000461 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:25:15.494 -07 000000455 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:25:15.704 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 03:25:15.704 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 381 ms overall
17-03-18 03:25:15.744 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:15.754 -07 000000626 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:25:15.754 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:15.754 -07 000000462 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:15.754 -07 000000462 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 03:25:15.754 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 382 ms, distance = 0.841 mm, average velocity = 2.202 mm/sec
17-03-18 03:25:16.574 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:16.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:16.704 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:16.704 -07 000000626 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:25:16.714 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:16.714 -07 000000462 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:16.734 -07 000000462 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:16.734 -07 000000462 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:16.734 -07 000000462 INF: Y Motor: Moved to 68.2046 after 1444 ms (table move)
17-03-18 03:25:16.744 -07 000000512 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175422 mm (DAC = 38321)
17-03-18 03:25:16.744 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:16.744 -07 000000424 INF: FPGA: Recv ZSGSRD 36596
17-03-18 03:25:16.754 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:25:16.764 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:16.764 -07 000000455 INF: FPGA: Recv ZSGSRD 36597
17-03-18 03:25:16.774 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:16.774 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:16.774 -07 000000461 INF: FPGA: Recv ZSGSRD 36596
17-03-18 03:25:16.784 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:16.784 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:16.784 -07 000000462 INF: FPGA: Recv ZSGSRD 36592
17-03-18 03:25:16.794 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:16.794 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:16.794 -07 000000561 INF: FPGA: Recv ZSGSRD 36595
17-03-18 03:25:16.804 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:16.804 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:16.804 -07 000000626 INF: FPGA: Recv ZSGSRD 36596
17-03-18 03:25:16.814 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:16.814 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:16.814 -07 000000430 INF: FPGA: Recv ZSGSRD 36598
17-03-18 03:25:16.824 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:16.824 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:16.824 -07 000000461 INF: FPGA: Recv ZSGSRD 36600
17-03-18 03:25:16.834 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:16.834 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:16.834 -07 000000590 INF: FPGA: Recv ZSGSRD 36599
17-03-18 03:25:16.844 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:16.844 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:16.844 -07 000000561 INF: FPGA: Recv ZSGSRD 36603
17-03-18 03:25:16.854 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:16.854 -07 000000512 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:16.854 -07 000000576 INF: FPGA: Recv ZPIEZORD 32743
17-03-18 03:25:16.864 -07 000000512 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:16.864 -07 000000512 INF: Z Motor: Piezo is near 49.9 V (nominally 0 to 100 V), expect near 58.5 V, since DAC is at 5.847 V. Piezo Error = -8.5 V.
17-03-18 03:25:16.864 -07 000000512 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.4 um, Read 10 ADC samples: Avg = 36597 (-174.5 uncal um), Error = 0.9 uncal um, Median = 36596 (-174.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36592 (-174.5 uncal um), Max = 36603 (-174.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:25:16.864 -07 000000512 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36597, posNoise = 6, negNoise = 5
17-03-18 03:25:16.864 -07 000000512 INF: Z Motor: After move to -0.175422, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:16.864 -07 000000512 INF: Z Motor: Settle wait time = 1448 ms, measure time = 118 ms (allowed 150 ms), total time = 1566 ms
17-03-18 03:25:16.864 -07 000000512 INF: Z Motor: Waiting extra 32 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:16.904 -07 000000512 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1614 ms
17-03-18 03:25:16.904 -07 000000512 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:16.904 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:16.904 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:16.904 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:25:16.904 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:16.904 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:16.904 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:16.904 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:16.904 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:25:16.914 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:25:16.914 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:25:16.924 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms.
17-03-18 03:25:16.924 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 13 ms.
17-03-18 03:25:16.924 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:25:16.964 -07 000000590 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:25:17.074 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.975845,
17-03-18 03:25:17.264 -07 000000579 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:25:17.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:25:17.264 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:25:17.274 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1077874736, 0x0, 559484976) start.
17-03-18 03:25:17.304 -07 000000561 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:25:17.304 -07 000000467 INF: FPGA: Recv CAMSNAP
17-03-18 03:25:17.304 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall
17-03-18 03:25:17.394 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1077874736, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 03:25:17.394 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:17.394 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:25:17.394 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 03:25:17.504 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:25:17.504 -07 000000576 INF: Autofocus start
17-03-18 03:25:17.504 -07 000000576 INF: MeasureProfile start
17-03-18 03:25:17.504 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:25:17.514 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:25:17.514 -07 000000579 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:25:17.514 -07 000000576 INF: MeasureProfile done
17-03-18 03:25:17.514 -07 000000576 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:25:17.514 -07 000000576 INF: Autofocus finished
17-03-18 03:25:17.714 -07 000000455 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:25:17.714 -07 000000579 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:25:17.714 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.175430243763161. ----------
17-03-18 03:25:17.714 -07 000000610 INF: Cycle	112	Tile	11	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:17.724 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36836, sync = True, waitForSettling = True)
17-03-18 03:25:17.724 -07 000000610 INF: Z Motor: Moving to -0.168624 mm, started at -0.175430 mm, distance = 6.81 um
17-03-18 03:25:17.724 -07 000000610 INF: FPGA: Xmit ZDACW 36836\n [Z Motor]
17-03-18 03:25:17.724 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:25:17.734 -07 000000610 INF: FPGA: 'ZDACW 36836' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:25:17.734 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:17.734 -07 000000502 INF: FPGA: Recv ZDACR 36836
17-03-18 03:25:17.744 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:17.744 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:17.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:17.894 -07 000000590 INF: FPGA: Recv ZSGSRD 35544
17-03-18 03:25:17.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:17.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:17.904 -07 000000591 INF: FPGA: Recv ZSGSRD 35547
17-03-18 03:25:17.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:17.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:17.914 -07 000000629 INF: FPGA: Recv ZSGSRD 35530
17-03-18 03:25:17.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:17.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:17.924 -07 000000461 INF: FPGA: Recv ZSGSRD 35530
17-03-18 03:25:17.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:17.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:17.934 -07 000000502 INF: FPGA: Recv ZSGSRD 35540
17-03-18 03:25:17.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:17.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:17.944 -07 000000618 INF: FPGA: Recv ZSGSRD 35541
17-03-18 03:25:17.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:17.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:17.954 -07 000000569 INF: FPGA: Recv ZSGSRD 35539
17-03-18 03:25:17.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:17.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:17.964 -07 000000626 INF: FPGA: Recv ZSGSRD 35536
17-03-18 03:25:17.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:17.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:17.974 -07 000000430 INF: FPGA: Recv ZSGSRD 35535
17-03-18 03:25:17.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:17.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:17.984 -07 000000467 INF: FPGA: Recv ZSGSRD 35536
17-03-18 03:25:17.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:17.994 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:17.994 -07 000000424 INF: FPGA: Recv ZPIEZORD 31369
17-03-18 03:25:18.004 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:18.004 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.621 V. Piezo Error = -9.2 V.
17-03-18 03:25:18.004 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35538 (-167.8 uncal um), Error = 0.9 uncal um, Median = 35538 (-167.8 uncal um), StdDev = 6 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35530 (-167.7 uncal um), Max = 35547 (-167.8 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:25:18.004 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35538, posNoise = 9, negNoise = 8
17-03-18 03:25:18.004 -07 000000610 INF: Z Motor: After move to -0.168624, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:18.004 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:25:18.004 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:18.004 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:18.004 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:18.004 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:18.004 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:18.004 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:18.004 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:18.004 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:18.004 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:18.004 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:18.004 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:18.004 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:18.014 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:25:18.014 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:18.014 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:25:18.014 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:18.014 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:25:18.014 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-18 03:25:18.024 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:25:18.024 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:25:18.024 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 37013 150\n [Camera]
17-03-18 03:25:18.224 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:18.624 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:18.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:18.634 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:18.634 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:18.634 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:18.634 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:18.754 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:18.754 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1096956120, 0x0, 391868352) start.
17-03-18 03:25:18.764 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:18.764 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) start.
17-03-18 03:25:18.824 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37013 790
17-03-18 03:25:18.974 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:19.134 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1096956120, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:25:19.134 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:25:19.134 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:19.134 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:25:19.134 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:25:19.134 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:19.134 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:19.134 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 504 ms.
17-03-18 03:25:19.134 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:19.144 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 510 ms.
17-03-18 03:25:19.164 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:19.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:19.164 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:19.174 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:19.174 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:19.174 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:19.174 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:19.174 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:25:19.174 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:19.174 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:25:19.354 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:25:19.354 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:19.354 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 37013 150' command took 2 ms to send, 1329 ms to get response, and 1335 ms overall
17-03-18 03:25:19.364 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.169282
17-03-18 03:25:19.364 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.16928 mm
17-03-18 03:25:19.364 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:19.364 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:25:19.364 -07 000000444 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm
17-03-18 03:25:19.364 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 36980, sync = True, waitForSettling = False)
17-03-18 03:25:19.364 -07 000000606 INF: Z Motor: Moving to -0.169284 mm, started at -0.168627 mm, distance = -0.66 um
17-03-18 03:25:19.364 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:19.364 -07 000000462 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:25:19.374 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:25:19.374 -07 000000444 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:19.374 -07 000000444 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:19.374 -07 000000444 INF: Y Motor: Moving 1341 steps-16
17-03-18 03:25:19.374 -07 000000606 INF: FPGA: Xmit ZDACW 36980\n [Z Motor]
17-03-18 03:25:19.374 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:25:19.384 -07 000000606 INF: FPGA: 'ZDACW 36980' command took 4 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:25:19.384 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:19.394 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:19.394 -07 000000591 INF: FPGA: Recv ZDACR 36980
17-03-18 03:25:19.404 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:19.404 -07 000000606 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:25:19.564 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:25:19.564 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:25:19.564 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:19.564 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 390 ms.
17-03-18 03:25:19.564 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:25:19.564 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:19.574 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:19.574 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:25:19.574 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:25:19.574 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-18 03:25:19.754 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-18 03:25:19.754 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-18 03:25:19.804 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:19.804 -07 000000579 INF: FPGA: Recv YRDPOS 141366
17-03-18 03:25:19.814 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:25:19.814 -07 000000444 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:19.814 -07 000000444 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 03:25:19.814 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.838 mm, average velocity = 2.182 mm/sec
17-03-18 03:25:20.764 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:20.764 -07 000000626 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:25:20.774 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:20.774 -07 000000444 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:20.794 -07 000000444 INF: Y Motor: After move to 69.042610, error = -0.015755, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:20.794 -07 000000444 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:25:20.794 -07 000000444 INF: Y Motor: Moved to 69.0269 after 1435 ms (table move)
17-03-18 03:25:20.804 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169284 mm (DAC = 36980)
17-03-18 03:25:20.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:20.804 -07 000000629 INF: FPGA: Recv ZSGSRD 35637
17-03-18 03:25:20.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:25:20.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:20.814 -07 000000461 INF: FPGA: Recv ZSGSRD 35642
17-03-18 03:25:20.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:20.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:20.824 -07 000000606 INF: FPGA: Recv ZSGSRD 35641
17-03-18 03:25:20.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:20.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:20.834 -07 000000591 INF: FPGA: Recv ZSGSRD 35639
17-03-18 03:25:20.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:20.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:20.844 -07 000000569 INF: FPGA: Recv ZSGSRD 35641
17-03-18 03:25:20.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:20.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:20.854 -07 000000629 INF: FPGA: Recv ZSGSRD 35644
17-03-18 03:25:20.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:20.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:20.864 -07 000000626 INF: FPGA: Recv ZSGSRD 35637
17-03-18 03:25:20.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:20.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:20.874 -07 000000590 INF: FPGA: Recv ZSGSRD 35642
17-03-18 03:25:20.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:20.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:20.884 -07 000000501 INF: FPGA: Recv ZSGSRD 35640
17-03-18 03:25:20.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:20.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:20.894 -07 000000502 INF: FPGA: Recv ZSGSRD 35645
17-03-18 03:25:20.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:20.904 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:20.904 -07 000000629 INF: FPGA: Recv ZPIEZORD 31474
17-03-18 03:25:20.914 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:20.914 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.643 V. Piezo Error = -9.2 V.
17-03-18 03:25:20.914 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35641 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35641 (-168.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35637 (-168.4 uncal um), Max = 35645 (-168.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:25:20.914 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35641, posNoise = 4, negNoise = 4
17-03-18 03:25:20.914 -07 000000610 INF: Z Motor: After move to -0.169284, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:20.914 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 109 ms (allowed 150 ms), total time = 1546 ms
17-03-18 03:25:20.914 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:20.964 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1598 ms
17-03-18 03:25:20.964 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:20.964 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02685546875, Z-position -0.169288696955637. ----------
17-03-18 03:25:20.964 -07 000000610 INF: Cycle	112	Tile	12	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:20.964 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36803, sync = True, waitForSettling = True)
17-03-18 03:25:20.964 -07 000000610 INF: Z Motor: Moving to -0.168473 mm, started at -0.169289 mm, distance = 0.82 um
17-03-18 03:25:20.964 -07 000000610 INF: FPGA: Xmit ZDACW 36803\n [Z Motor]
17-03-18 03:25:20.964 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:25:20.974 -07 000000610 INF: FPGA: 'ZDACW 36803' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:20.974 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:20.974 -07 000000462 INF: FPGA: Recv ZDACR 36803
17-03-18 03:25:20.984 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:20.984 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:21.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:21.134 -07 000000424 INF: FPGA: Recv ZSGSRD 35517
17-03-18 03:25:21.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:21.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:21.144 -07 000000512 INF: FPGA: Recv ZSGSRD 35515
17-03-18 03:25:21.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:21.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:21.154 -07 000000629 INF: FPGA: Recv ZSGSRD 35514
17-03-18 03:25:21.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:21.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:21.164 -07 000000591 INF: FPGA: Recv ZSGSRD 35519
17-03-18 03:25:21.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:21.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:21.174 -07 000000590 INF: FPGA: Recv ZSGSRD 35514
17-03-18 03:25:21.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:21.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:21.184 -07 000000576 INF: FPGA: Recv ZSGSRD 35509
17-03-18 03:25:21.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:21.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:21.194 -07 000000430 INF: FPGA: Recv ZSGSRD 35515
17-03-18 03:25:21.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:21.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:21.204 -07 000000629 INF: FPGA: Recv ZSGSRD 35520
17-03-18 03:25:21.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:21.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:21.214 -07 000000591 INF: FPGA: Recv ZSGSRD 35517
17-03-18 03:25:21.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:21.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:21.224 -07 000000462 INF: FPGA: Recv ZSGSRD 35516
17-03-18 03:25:21.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:21.234 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:21.234 -07 000000626 INF: FPGA: Recv ZPIEZORD 31292
17-03-18 03:25:21.244 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:21.244 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.616 V. Piezo Error = -9.3 V.
17-03-18 03:25:21.244 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.5 um, Read 10 ADC samples: Avg = 35516 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35516 (-167.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35509 (-167.6 uncal um), Max = 35520 (-167.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:25:21.244 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35516, posNoise = 4, negNoise = 7
17-03-18 03:25:21.244 -07 000000610 INF: Z Motor: After move to -0.168473, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:21.244 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:25:21.244 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:21.244 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:21.244 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:21.244 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:21.244 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:21.244 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:21.244 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:21.244 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:21.244 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:21.244 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:21.244 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:21.244 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:21.254 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:21.254 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:21.254 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:25:21.254 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:21.264 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:25:21.264 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:25:21.264 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:25:21.264 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:25:21.274 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 36980 150\n [Camera]
17-03-18 03:25:21.464 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:21.574 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:21.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:21.874 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:21.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:21.874 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:21.874 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:21.874 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-18 03:25:21.874 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:21.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:21.884 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:21.884 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:21.884 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1132378384, 0x0, 418435064) start.
17-03-18 03:25:22.064 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36980 790
17-03-18 03:25:22.214 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:22.254 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:25:22.254 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:25:22.254 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:22.254 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1132378384, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:25:22.254 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:25:22.254 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:22.254 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:22.254 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:25:22.254 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:22.264 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:25:22.414 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:22.414 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:22.414 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:22.414 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:22.414 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1167800648, 0x0, 391868352) start.
17-03-18 03:25:22.414 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:22.414 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:22.414 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:22.414 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:22.414 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:25:22.434 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.983999,
17-03-18 03:25:22.604 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:25:22.604 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:22.604 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 36980 150' command took 2 ms to send, 1324 ms to get response, and 1334 ms overall
17-03-18 03:25:22.604 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.168811
17-03-18 03:25:22.604 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16881 mm
17-03-18 03:25:22.604 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:22.614 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:25:22.614 -07 000000576 INF: Y Motor: Moving to 69.8726 mm, started at 69.0269 mm, delta = 0.8458 mm
17-03-18 03:25:22.614 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:22.614 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 36877, sync = True, waitForSettling = False)
17-03-18 03:25:22.724 -07 000000461 INF: Z Motor: Moving to -0.168812 mm, started at -0.168486 mm, distance = -0.33 um
17-03-18 03:25:22.724 -07 000000467 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:25:22.724 -07 000000461 INF: FPGA: Xmit ZDACW 36877\n [Z Motor]
17-03-18 03:25:22.724 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 118 ms overall
17-03-18 03:25:22.724 -07 000000576 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:22.724 -07 000000576 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:22.724 -07 000000576 INF: Y Motor: Moving 1353 steps-33
17-03-18 03:25:22.734 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:22.734 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:25:22.734 -07 000000461 INF: FPGA: 'ZDACW 36877' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:25:22.744 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:22.744 -07 000000590 INF: FPGA: Recv ZDACR 36877
17-03-18 03:25:22.754 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:25:22.754 -07 000000461 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 03:25:22.814 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 394 ms.
17-03-18 03:25:22.814 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:25:22.814 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:22.814 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1167800648, 0x0, 391868352) end. Duration was 398 ms.
17-03-18 03:25:22.814 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:25:22.814 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:22.814 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:25:22.814 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:25:22.814 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 03:25:22.824 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 03:25:23.104 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:25:23.104 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 379 ms overall
17-03-18 03:25:23.154 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:23.164 -07 000000569 INF: FPGA: Recv YRDPOS 143078
17-03-18 03:25:23.164 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:25:23.164 -07 000000576 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:23.164 -07 000000576 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 03:25:23.164 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 379 ms, distance = 0.846 mm, average velocity = 2.232 mm/sec
17-03-18 03:25:24.114 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:24.114 -07 000000455 INF: FPGA: Recv YRDPOS 143078
17-03-18 03:25:24.124 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:24.124 -07 000000576 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:24.144 -07 000000576 INF: Y Motor: After move to 69.872612, error = -0.010307, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:24.144 -07 000000576 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:24.144 -07 000000576 INF: Y Motor: Moved to 69.8623 after 1538 ms (table move)
17-03-18 03:25:24.154 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168812 mm (DAC = 36877)
17-03-18 03:25:24.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.154 -07 000000561 INF: FPGA: Recv ZSGSRD 35564
17-03-18 03:25:24.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:25:24.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.164 -07 000000618 INF: FPGA: Recv ZSGSRD 35574
17-03-18 03:25:24.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.174 -07 000000467 INF: FPGA: Recv ZSGSRD 35567
17-03-18 03:25:24.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.184 -07 000000455 INF: FPGA: Recv ZSGSRD 35566
17-03-18 03:25:24.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.194 -07 000000502 INF: FPGA: Recv ZSGSRD 35572
17-03-18 03:25:24.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.204 -07 000000430 INF: FPGA: Recv ZSGSRD 35565
17-03-18 03:25:24.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.214 -07 000000618 INF: FPGA: Recv ZSGSRD 35566
17-03-18 03:25:24.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.224 -07 000000461 INF: FPGA: Recv ZSGSRD 35563
17-03-18 03:25:24.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.234 -07 000000444 INF: FPGA: Recv ZSGSRD 35571
17-03-18 03:25:24.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.244 -07 000000512 INF: FPGA: Recv ZSGSRD 35568
17-03-18 03:25:24.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.254 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:24.254 -07 000000462 INF: FPGA: Recv ZPIEZORD 31396
17-03-18 03:25:24.264 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.264 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.627 V. Piezo Error = -9.2 V.
17-03-18 03:25:24.264 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.8 um, Read 10 ADC samples: Avg = 35568 (-167.9 uncal um), Error = 0.9 uncal um, Median = 35566 (-167.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35563 (-167.9 uncal um), Max = 35574 (-168.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:25:24.264 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35568, posNoise = 6, negNoise = 5
17-03-18 03:25:24.264 -07 000000610 INF: Z Motor: After move to -0.168812, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:24.264 -07 000000610 INF: Z Motor: Settle wait time = 1422 ms, measure time = 110 ms (allowed 150 ms), total time = 1532 ms
17-03-18 03:25:24.264 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:24.304 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1692 ms
17-03-18 03:25:24.304 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:24.304 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.8623046875, Z-position -0.168819729469289. ----------
17-03-18 03:25:24.304 -07 000000610 INF: Cycle	112	Tile	13	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:24.304 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36700, sync = True, waitForSettling = True)
17-03-18 03:25:24.304 -07 000000610 INF: Z Motor: Moving to -0.168002 mm, started at -0.168820 mm, distance = 0.82 um
17-03-18 03:25:24.304 -07 000000610 INF: FPGA: Xmit ZDACW 36700\n [Z Motor]
17-03-18 03:25:24.304 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:25:24.314 -07 000000610 INF: FPGA: 'ZDACW 36700' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:24.314 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:24.314 -07 000000424 INF: FPGA: Recv ZDACR 36700
17-03-18 03:25:24.324 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.324 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:24.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.474 -07 000000590 INF: FPGA: Recv ZSGSRD 35444
17-03-18 03:25:24.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:24.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.484 -07 000000561 INF: FPGA: Recv ZSGSRD 35445
17-03-18 03:25:24.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.494 -07 000000626 INF: FPGA: Recv ZSGSRD 35443
17-03-18 03:25:24.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.504 -07 000000569 INF: FPGA: Recv ZSGSRD 35444
17-03-18 03:25:24.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.514 -07 000000430 INF: FPGA: Recv ZSGSRD 35442
17-03-18 03:25:24.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.524 -07 000000455 INF: FPGA: Recv ZSGSRD 35439
17-03-18 03:25:24.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.534 -07 000000501 INF: FPGA: Recv ZSGSRD 35443
17-03-18 03:25:24.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.544 -07 000000462 INF: FPGA: Recv ZSGSRD 35442
17-03-18 03:25:24.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.554 -07 000000629 INF: FPGA: Recv ZSGSRD 35450
17-03-18 03:25:24.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:24.564 -07 000000461 INF: FPGA: Recv ZSGSRD 35443
17-03-18 03:25:24.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.574 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:24.574 -07 000000512 INF: FPGA: Recv ZPIEZORD 31204
17-03-18 03:25:24.584 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:24.584 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.600 V. Piezo Error = -9.3 V.
17-03-18 03:25:24.584 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.0 um, Read 10 ADC samples: Avg = 35444 (-167.2 uncal um), Error = 0.8 uncal um, Median = 35443 (-167.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35439 (-167.1 uncal um), Max = 35450 (-167.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:25:24.584 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35444, posNoise = 6, negNoise = 5
17-03-18 03:25:24.584 -07 000000610 INF: Z Motor: After move to -0.168002, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:24.584 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:25:24.584 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:24.584 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:24.584 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:24.584 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:24.584 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:24.584 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:24.584 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:24.584 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:24.584 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:24.584 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:24.584 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:24.584 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:24.594 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:24.594 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:24.594 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:25:24.594 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:24.604 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:25:24.604 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:25:24.604 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:25:24.604 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:25:24.614 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 36877 150\n [Camera]
17-03-18 03:25:24.814 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:25.214 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:25.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:25.214 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:25.214 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:25.214 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:25.214 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:25.214 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:25.214 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 592591928, 0x0, 391868352) start.
17-03-18 03:25:25.224 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:25.224 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:25:25.404 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36877 790
17-03-18 03:25:25.554 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:25.604 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 592591928, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:25:25.604 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:25:25.604 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:25.604 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:25:25.604 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:25:25.604 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:25.614 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:25:25.614 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:25:25.614 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:25.614 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:25:25.754 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:25.754 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:25.754 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:25.754 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:25.754 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:25.754 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:25.764 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:25.764 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:25:25.764 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:25.764 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:25:25.944 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:25:25.944 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:25.944 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 36877 150' command took 2 ms to send, 1325 ms to get response, and 1334 ms overall
17-03-18 03:25:25.944 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.167945
17-03-18 03:25:25.944 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16794 mm
17-03-18 03:25:25.944 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:25.944 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:25:25.944 -07 000000569 INF: Y Motor: Moving to 70.7026 mm, started at 69.8623 mm, delta = 0.8403 mm
17-03-18 03:25:25.944 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:25.954 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 36688, sync = True, waitForSettling = False)
17-03-18 03:25:25.954 -07 000000461 INF: Z Motor: Moving to -0.167947 mm, started at -0.168023 mm, distance = 0.08 um
17-03-18 03:25:25.954 -07 000000461 INF: FPGA: Xmit ZDACW 36688\n [Z Motor]
17-03-18 03:25:25.954 -07 000000629 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:25:25.954 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:25:25.954 -07 000000569 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:25.954 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:25:25.954 -07 000000569 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:25.954 -07 000000569 INF: Y Motor: Moving 1344 steps-21
17-03-18 03:25:25.964 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:25.964 -07 000000461 INF: FPGA: 'ZDACW 36688' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:25:25.974 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:25.974 -07 000000576 INF: FPGA: Recv ZDACR 36688
17-03-18 03:25:25.984 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:25.984 -07 000000461 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 03:25:26.134 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:25:26.134 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:25:26.134 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:26.134 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:25:26.134 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:25:26.134 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:26.144 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:26.144 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:26.144 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:25:26.144 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:25:26.334 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:25:26.334 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 382 ms overall
17-03-18 03:25:26.384 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:26.384 -07 000000512 INF: FPGA: Recv YRDPOS 144768
17-03-18 03:25:26.394 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:25:26.394 -07 000000569 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:26.394 -07 000000569 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:25:26.394 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 382 ms, distance = 0.840 mm, average velocity = 2.200 mm/sec
17-03-18 03:25:26.574 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:26.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:27.344 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:27.344 -07 000000430 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:25:27.354 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:27.354 -07 000000569 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:27.374 -07 000000569 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:27.374 -07 000000569 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:25:27.374 -07 000000569 INF: Y Motor: Moved to 70.6880 after 1429 ms (table move)
17-03-18 03:25:27.384 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167947 mm (DAC = 36688)
17-03-18 03:25:27.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.384 -07 000000467 INF: FPGA: Recv ZSGSRD 35432
17-03-18 03:25:27.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:25:27.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.394 -07 000000444 INF: FPGA: Recv ZSGSRD 35426
17-03-18 03:25:27.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.404 -07 000000502 INF: FPGA: Recv ZSGSRD 35439
17-03-18 03:25:27.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.414 -07 000000561 INF: FPGA: Recv ZSGSRD 35439
17-03-18 03:25:27.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.424 -07 000000590 INF: FPGA: Recv ZSGSRD 35439
17-03-18 03:25:27.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.434 -07 000000462 INF: FPGA: Recv ZSGSRD 35428
17-03-18 03:25:27.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.444 -07 000000579 INF: FPGA: Recv ZSGSRD 35435
17-03-18 03:25:27.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.454 -07 000000629 INF: FPGA: Recv ZSGSRD 35431
17-03-18 03:25:27.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.464 -07 000000424 INF: FPGA: Recv ZSGSRD 35430
17-03-18 03:25:27.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.484 -07 000000444 INF: FPGA: Recv ZSGSRD 35435
17-03-18 03:25:27.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:27.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:27.494 -07 000000512 INF: FPGA: Recv ZPIEZORD 31205
17-03-18 03:25:27.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.504 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.598 V. Piezo Error = -9.3 V.
17-03-18 03:25:27.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35433 (-167.1 uncal um), Error = 0.9 uncal um, Median = 35434 (-167.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35426 (-167.0 uncal um), Max = 35439 (-167.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:25:27.504 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35433, posNoise = 6, negNoise = 7
17-03-18 03:25:27.504 -07 000000610 INF: Z Motor: After move to -0.167947, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:27.504 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 119 ms (allowed 150 ms), total time = 1549 ms
17-03-18 03:25:27.504 -07 000000610 INF: Z Motor: Waiting extra 31 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:27.544 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-18 03:25:27.544 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:27.544 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.167952460830151. ----------
17-03-18 03:25:27.544 -07 000000610 INF: Cycle	112	Tile	14	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:27.544 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36511, sync = True, waitForSettling = True)
17-03-18 03:25:27.544 -07 000000610 INF: Z Motor: Moving to -0.167137 mm, started at -0.167952 mm, distance = 0.82 um
17-03-18 03:25:27.544 -07 000000610 INF: FPGA: Xmit ZDACW 36511\n [Z Motor]
17-03-18 03:25:27.544 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:25:27.554 -07 000000610 INF: FPGA: 'ZDACW 36511' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:27.554 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:27.554 -07 000000569 INF: FPGA: Recv ZDACR 36511
17-03-18 03:25:27.564 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:27.564 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:27.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.714 -07 000000501 INF: FPGA: Recv ZSGSRD 35308
17-03-18 03:25:27.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:27.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.724 -07 000000455 INF: FPGA: Recv ZSGSRD 35310
17-03-18 03:25:27.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.734 -07 000000512 INF: FPGA: Recv ZSGSRD 35309
17-03-18 03:25:27.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.744 -07 000000430 INF: FPGA: Recv ZSGSRD 35311
17-03-18 03:25:27.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.754 -07 000000606 INF: FPGA: Recv ZSGSRD 35306
17-03-18 03:25:27.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.764 -07 000000626 INF: FPGA: Recv ZSGSRD 35308
17-03-18 03:25:27.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.774 -07 000000455 INF: FPGA: Recv ZSGSRD 35304
17-03-18 03:25:27.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.794 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.014009,
17-03-18 03:25:27.794 -07 000000591 INF: FPGA: Recv ZSGSRD 35308
17-03-18 03:25:27.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:27.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.824 -07 000000502 INF: FPGA: Recv ZSGSRD 35308
17-03-18 03:25:27.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:25:27.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:27.834 -07 000000569 INF: FPGA: Recv ZSGSRD 35307
17-03-18 03:25:27.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:27.864 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:27.864 -07 000000576 INF: FPGA: Recv ZPIEZORD 31019
17-03-18 03:25:27.874 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:25:27.874 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.571 V. Piezo Error = -9.4 V.
17-03-18 03:25:27.874 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35308 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35308 (-166.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35304 (-166.3 uncal um), Max = 35311 (-166.3 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:25:27.874 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35308, posNoise = 3, negNoise = 4
17-03-18 03:25:27.874 -07 000000610 INF: Z Motor: After move to -0.167137, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:27.874 -07 000000610 INF: Z Motor: MoveAbsStepped took 324 ms)
17-03-18 03:25:27.874 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:27.874 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:27.874 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:27.874 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:27.874 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:27.874 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:27.874 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:27.874 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:27.874 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:27.874 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:27.874 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:27.874 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:27.884 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:25:27.884 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:27.884 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:27.884 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:27.894 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:25:27.894 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:25:27.894 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:25:27.894 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:25:27.894 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 36688 150\n [Camera]
17-03-18 03:25:28.094 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:28.504 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 598
17-03-18 03:25:28.504 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 598
17-03-18 03:25:28.504 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:28.504 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 598
17-03-18 03:25:28.504 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 598
17-03-18 03:25:28.504 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:28.514 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:28.514 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-18 03:25:28.514 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:28.514 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1113428128, 0x0, 391868352) start.
17-03-18 03:25:28.694 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36688 790
17-03-18 03:25:28.844 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:28.884 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1113428128, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 03:25:28.884 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:25:28.884 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:28.884 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:25:28.884 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:25:28.884 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:28.894 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:28.894 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:25:28.894 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:28.904 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:25:29.044 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:29.044 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:29.044 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:29.044 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:29.044 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:25:29.044 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:29.044 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:29.044 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:29.044 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:29.044 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:25:29.234 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:25:29.234 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:29.234 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 36688 150' command took 2 ms to send, 1324 ms to get response, and 1334 ms overall
17-03-18 03:25:29.234 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:25:29.234 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.68798828125, Z-Position -0.167149434312431. ------
17-03-18 03:25:29.234 -07 000000591 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.17387 mm
17-03-18 03:25:29.234 -07 000000591 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:29.234 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:25:29.364 -07 000000561 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:25:29.364 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 128 ms overall
17-03-18 03:25:29.364 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:25:29.364 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:25:29.364 -07 000000467 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm
17-03-18 03:25:29.364 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 37981, sync = True, waitForSettling = False)
17-03-18 03:25:29.364 -07 000000590 INF: Z Motor: Moving to -0.173866 mm, started at -0.167149 mm, distance = -6.72 um
17-03-18 03:25:29.374 -07 000000590 INF: FPGA: Xmit ZDACW 37981\n [Z Motor]
17-03-18 03:25:29.374 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:25:29.384 -07 000000590 INF: FPGA: 'ZDACW 37981' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:29.384 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:29.384 -07 000000579 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:25:29.394 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:29.394 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 03:25:29.394 -07 000000467 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:29.394 -07 000000467 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:29.394 -07 000000467 INF: Y Motor: Moving 1351 steps-31
17-03-18 03:25:29.394 -07 000000576 INF: FPGA: Recv ZDACR 37981
17-03-18 03:25:29.404 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:29.404 -07 000000590 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:25:29.404 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:29.424 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:25:29.424 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:25:29.424 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:29.424 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:25:29.424 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:25:29.434 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:29.434 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:29.434 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:29.434 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:25:29.444 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:25:29.574 -07 000000424 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:25:29.574 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 201 ms to get response, and 202 ms overall
17-03-18 03:25:29.774 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 03:25:29.774 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:25:29.834 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:29.844 -07 000000590 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:25:29.844 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:25:29.844 -07 000000467 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:29.844 -07 000000467 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:25:29.844 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.845 mm, average velocity = 2.177 mm/sec
17-03-18 03:25:30.794 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:30.794 -07 000000424 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:25:30.804 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:30.804 -07 000000467 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:30.824 -07 000000467 INF: Y Motor: After move to 71.532608, error = -0.014542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:30.824 -07 000000467 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:30.824 -07 000000467 INF: Y Motor: Moved to 71.5181 after 1459 ms (table move)
17-03-18 03:25:30.834 -07 000000591 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173866 mm (DAC = 37981)
17-03-18 03:25:30.834 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:30.834 -07 000000569 INF: FPGA: Recv ZSGSRD 36349
17-03-18 03:25:30.844 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:25:30.844 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:30.844 -07 000000430 INF: FPGA: Recv ZSGSRD 36358
17-03-18 03:25:30.854 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:30.854 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:30.854 -07 000000561 INF: FPGA: Recv ZSGSRD 36359
17-03-18 03:25:30.864 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:30.864 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:30.864 -07 000000606 INF: FPGA: Recv ZSGSRD 36355
17-03-18 03:25:30.874 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:30.874 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:30.874 -07 000000576 INF: FPGA: Recv ZSGSRD 36354
17-03-18 03:25:30.884 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:30.884 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:30.884 -07 000000501 INF: FPGA: Recv ZSGSRD 36358
17-03-18 03:25:30.894 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:25:30.894 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:30.894 -07 000000569 INF: FPGA: Recv ZSGSRD 36355
17-03-18 03:25:30.904 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:30.904 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:30.904 -07 000000467 INF: FPGA: Recv ZSGSRD 36351
17-03-18 03:25:30.914 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:30.914 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:30.914 -07 000000561 INF: FPGA: Recv ZSGSRD 36356
17-03-18 03:25:30.924 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:30.924 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:30.924 -07 000000462 INF: FPGA: Recv ZSGSRD 36360
17-03-18 03:25:30.934 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:30.934 -07 000000591 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:30.934 -07 000000455 INF: FPGA: Recv ZPIEZORD 32469
17-03-18 03:25:30.944 -07 000000591 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:30.944 -07 000000591 INF: Z Motor: Piezo is near 49.4 V (nominally 0 to 100 V), expect near 58.0 V, since DAC is at 5.796 V. Piezo Error = -8.6 V.
17-03-18 03:25:30.944 -07 000000591 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.9 um, Read 10 ADC samples: Avg = 36356 (-173.0 uncal um), Error = 0.9 uncal um, Median = 36356 (-173.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36349 (-173.0 uncal um), Max = 36360 (-173.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:25:30.944 -07 000000591 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36356, posNoise = 4, negNoise = 7
17-03-18 03:25:30.944 -07 000000591 INF: Z Motor: After move to -0.173866, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:30.944 -07 000000591 INF: Z Motor: Settle wait time = 1462 ms, measure time = 108 ms (allowed 150 ms), total time = 1570 ms
17-03-18 03:25:30.944 -07 000000591 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:30.994 -07 000000591 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1750 ms
17-03-18 03:25:30.994 -07 000000591 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:30.994 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:30.994 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:30.994 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:30.994 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:30.994 -07 000000462 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:25:30.994 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:30.994 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:25:30.994 -07 000000462 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:25:31.004 -07 000000462 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:25:31.004 -07 000000462 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:25:31.014 -07 000000462 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:25:31.014 -07 000000462 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-18 03:25:31.014 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:25:31.064 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:25:31.364 -07 000000502 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:25:31.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:25:31.364 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:25:31.364 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 592591928, 0x0, 559484976) start.
17-03-18 03:25:31.404 -07 000000606 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:25:31.404 -07 000000467 INF: FPGA: Recv CAMSNAP
17-03-18 03:25:31.404 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 385 ms to get response, and 388 ms overall
17-03-18 03:25:31.484 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 592591928, 0x0, 559484976) end. Duration was 123 ms.
17-03-18 03:25:31.484 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:31.484 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 03:25:31.484 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 126 ms.
17-03-18 03:25:31.504 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:25:31.504 -07 000000618 INF: Autofocus start
17-03-18 03:25:31.504 -07 000000618 INF: MeasureProfile start
17-03-18 03:25:31.514 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:25:31.514 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:25:31.514 -07 000000455 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:25:31.524 -07 000000618 INF: MeasureProfile done
17-03-18 03:25:31.524 -07 000000618 INF: X=-32  Z correction [um]=-0.2344
17-03-18 03:25:31.524 -07 000000618 INF: Autofocus finished
17-03-18 03:25:31.574 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:31.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:31.714 -07 000000629 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:25:31.714 -07 000000455 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:25:31.714 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51806640625, Z-position -0.173882008636996. ----------
17-03-18 03:25:31.714 -07 000000610 INF: Cycle	112	Tile	15	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:31.724 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36442, sync = True, waitForSettling = True)
17-03-18 03:25:31.724 -07 000000610 INF: Z Motor: Moving to -0.166821 mm, started at -0.173882 mm, distance = 7.06 um
17-03-18 03:25:31.724 -07 000000610 INF: FPGA: Xmit ZDACW 36442\n [Z Motor]
17-03-18 03:25:31.724 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:25:31.734 -07 000000610 INF: FPGA: 'ZDACW 36442' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:25:31.734 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:31.734 -07 000000462 INF: FPGA: Recv ZDACR 36442
17-03-18 03:25:31.744 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:31.744 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:31.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:31.894 -07 000000576 INF: FPGA: Recv ZSGSRD 35258
17-03-18 03:25:31.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:31.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:31.904 -07 000000424 INF: FPGA: Recv ZSGSRD 35260
17-03-18 03:25:31.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:31.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:31.914 -07 000000467 INF: FPGA: Recv ZSGSRD 35258
17-03-18 03:25:31.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:31.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:31.924 -07 000000618 INF: FPGA: Recv ZSGSRD 35256
17-03-18 03:25:31.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:31.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:31.934 -07 000000455 INF: FPGA: Recv ZSGSRD 35255
17-03-18 03:25:31.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:31.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:31.944 -07 000000606 INF: FPGA: Recv ZSGSRD 35264
17-03-18 03:25:31.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:31.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:31.954 -07 000000591 INF: FPGA: Recv ZSGSRD 35259
17-03-18 03:25:31.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:31.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:31.964 -07 000000512 INF: FPGA: Recv ZSGSRD 35257
17-03-18 03:25:31.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:31.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:31.974 -07 000000461 INF: FPGA: Recv ZSGSRD 35254
17-03-18 03:25:31.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:31.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:31.984 -07 000000626 INF: FPGA: Recv ZSGSRD 35262
17-03-18 03:25:31.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:31.994 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:31.994 -07 000000590 INF: FPGA: Recv ZPIEZORD 30981
17-03-18 03:25:32.004 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:32.004 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.561 V. Piezo Error = -9.4 V.
17-03-18 03:25:32.004 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.8 um, Read 10 ADC samples: Avg = 35258 (-166.0 uncal um), Error = 0.9 uncal um, Median = 35258 (-166.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35254 (-165.9 uncal um), Max = 35264 (-166.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:25:32.004 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35258, posNoise = 6, negNoise = 4
17-03-18 03:25:32.004 -07 000000610 INF: Z Motor: After move to -0.166821, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:32.004 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:25:32.004 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:32.004 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:32.004 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:32.004 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:32.004 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:32.004 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:32.004 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:32.004 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:32.004 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:32.004 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:32.004 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:32.004 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:32.014 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:32.014 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:32.014 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:25:32.014 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:32.014 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:25:32.014 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:25:32.024 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:25:32.024 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:25:32.024 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 36619 150\n [Camera]
17-03-18 03:25:32.224 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:32.624 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:32.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:32.634 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:32.634 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:32.634 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:32.634 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:32.634 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:32.634 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:25:32.634 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:32.634 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:25:32.824 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36619 790
17-03-18 03:25:32.974 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:33.004 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:25:33.004 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:25:33.004 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:33.014 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:25:33.014 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:25:33.014 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:33.014 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:33.014 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:25:33.014 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:25:33.024 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:25:33.164 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:33.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:33.164 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:33.164 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:33.174 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:33.174 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:33.174 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:33.174 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:25:33.184 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:33.184 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:25:33.184 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.007176,
17-03-18 03:25:33.354 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:25:33.354 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:33.354 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 36619 150' command took 2 ms to send, 1328 ms to get response, and 1334 ms overall
17-03-18 03:25:33.364 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.167230
17-03-18 03:25:33.364 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.16723 mm
17-03-18 03:25:33.364 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:33.364 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:25:33.364 -07 000000430 INF: Y Motor: Moving to 72.3626 mm, started at 71.5181 mm, delta = 0.8445 mm
17-03-18 03:25:33.364 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:33.364 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 36531, sync = True, waitForSettling = False)
17-03-18 03:25:33.364 -07 000000579 INF: Z Motor: Moving to -0.167228 mm, started at -0.166828 mm, distance = -0.40 um
17-03-18 03:25:33.364 -07 000000618 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:25:33.374 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:25:33.374 -07 000000430 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:33.374 -07 000000430 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:33.374 -07 000000430 INF: Y Motor: Moving 1351 steps-30
17-03-18 03:25:33.374 -07 000000579 INF: FPGA: Xmit ZDACW 36531\n [Z Motor]
17-03-18 03:25:33.374 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:25:33.384 -07 000000579 INF: FPGA: 'ZDACW 36531' command took 1 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:25:33.384 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:33.384 -07 000000590 INF: FPGA: Recv ZDACR 36531
17-03-18 03:25:33.394 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:33.394 -07 000000579 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:33.394 -07 000000579 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:25:33.564 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:25:33.564 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:25:33.564 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:33.564 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:25:33.564 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:25:33.564 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:33.564 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:33.564 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:25:33.574 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:33.574 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-18 03:25:33.764 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:25:33.764 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:25:33.814 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:33.814 -07 000000569 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:25:33.824 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:25:33.824 -07 000000430 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:33.824 -07 000000430 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:25:33.824 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.127 mm/sec
17-03-18 03:25:34.774 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:34.774 -07 000000424 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:25:34.784 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:34.784 -07 000000430 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:34.814 -07 000000430 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:34.814 -07 000000430 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:34.814 -07 000000430 INF: Y Motor: Moved to 72.3491 after 1447 ms (table move)
17-03-18 03:25:34.814 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167228 mm (DAC = 36531)
17-03-18 03:25:34.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:34.814 -07 000000626 INF: FPGA: Recv ZSGSRD 35322
17-03-18 03:25:34.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:25:34.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:34.824 -07 000000462 INF: FPGA: Recv ZSGSRD 35324
17-03-18 03:25:34.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:34.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:34.834 -07 000000576 INF: FPGA: Recv ZSGSRD 35321
17-03-18 03:25:34.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:34.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:34.844 -07 000000512 INF: FPGA: Recv ZSGSRD 35323
17-03-18 03:25:34.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:34.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:34.854 -07 000000561 INF: FPGA: Recv ZSGSRD 35316
17-03-18 03:25:34.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:34.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:34.864 -07 000000455 INF: FPGA: Recv ZSGSRD 35319
17-03-18 03:25:34.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:34.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:34.874 -07 000000430 INF: FPGA: Recv ZSGSRD 35318
17-03-18 03:25:34.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:34.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:34.884 -07 000000606 INF: FPGA: Recv ZSGSRD 35318
17-03-18 03:25:34.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:34.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:34.894 -07 000000618 INF: FPGA: Recv ZSGSRD 35322
17-03-18 03:25:34.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:34.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:34.904 -07 000000576 INF: FPGA: Recv ZSGSRD 35320
17-03-18 03:25:34.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:34.914 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:34.914 -07 000000626 INF: FPGA: Recv ZPIEZORD 31088
17-03-18 03:25:34.924 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:34.924 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.574 V. Piezo Error = -9.3 V.
17-03-18 03:25:34.924 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.2 um, Read 10 ADC samples: Avg = 35320 (-166.4 uncal um), Error = 0.9 uncal um, Median = 35320 (-166.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35316 (-166.3 uncal um), Max = 35324 (-166.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:25:34.924 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35320, posNoise = 4, negNoise = 4
17-03-18 03:25:34.924 -07 000000610 INF: Z Motor: After move to -0.167228, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:34.924 -07 000000610 INF: Z Motor: Settle wait time = 1449 ms, measure time = 107 ms (allowed 150 ms), total time = 1556 ms
17-03-18 03:25:34.924 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:34.974 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1608 ms
17-03-18 03:25:34.974 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:34.974 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.167226524858132. ----------
17-03-18 03:25:34.974 -07 000000610 INF: Cycle	112	Tile	16	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:34.974 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36355, sync = True, waitForSettling = True)
17-03-18 03:25:34.974 -07 000000610 INF: Z Motor: Moving to -0.166423 mm, started at -0.167227 mm, distance = 0.80 um
17-03-18 03:25:34.974 -07 000000610 INF: FPGA: Xmit ZDACW 36355\n [Z Motor]
17-03-18 03:25:34.974 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:25:34.984 -07 000000610 INF: FPGA: 'ZDACW 36355' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:34.984 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:34.984 -07 000000424 INF: FPGA: Recv ZDACR 36355
17-03-18 03:25:34.994 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:34.994 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:35.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:35.144 -07 000000461 INF: FPGA: Recv ZSGSRD 35198
17-03-18 03:25:35.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:35.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:35.154 -07 000000579 INF: FPGA: Recv ZSGSRD 35199
17-03-18 03:25:35.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:35.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:35.164 -07 000000455 INF: FPGA: Recv ZSGSRD 35192
17-03-18 03:25:35.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:35.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:35.174 -07 000000444 INF: FPGA: Recv ZSGSRD 35193
17-03-18 03:25:35.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:35.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:35.184 -07 000000576 INF: FPGA: Recv ZSGSRD 35197
17-03-18 03:25:35.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:35.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:35.194 -07 000000462 INF: FPGA: Recv ZSGSRD 35193
17-03-18 03:25:35.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:35.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:35.204 -07 000000561 INF: FPGA: Recv ZSGSRD 35188
17-03-18 03:25:35.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:35.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:35.214 -07 000000455 INF: FPGA: Recv ZSGSRD 35193
17-03-18 03:25:35.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:35.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:35.224 -07 000000512 INF: FPGA: Recv ZSGSRD 35195
17-03-18 03:25:35.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:35.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:35.234 -07 000000590 INF: FPGA: Recv ZSGSRD 35201
17-03-18 03:25:35.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:35.244 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:35.244 -07 000000606 INF: FPGA: Recv ZPIEZORD 30924
17-03-18 03:25:35.254 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:35.254 -07 000000610 INF: Z Motor: Piezo is near 46.1 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.547 V. Piezo Error = -9.4 V.
17-03-18 03:25:35.254 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.4 um, Read 10 ADC samples: Avg = 35195 (-165.6 uncal um), Error = 0.9 uncal um, Median = 35194 (-165.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35188 (-165.5 uncal um), Max = 35201 (-165.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:25:35.254 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35195, posNoise = 6, negNoise = 7
17-03-18 03:25:35.254 -07 000000610 INF: Z Motor: After move to -0.166423, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:35.254 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:25:35.254 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:35.254 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:35.254 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:35.254 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:35.254 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:35.254 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:35.254 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:35.254 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:35.254 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-18 03:25:35.254 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:35.254 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:35.254 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:35.264 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:25:35.264 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:35.264 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:35.264 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:35.274 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:25:35.274 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:25:35.274 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:25:35.274 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:25:35.274 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 36531 150\n [Camera]
17-03-18 03:25:35.474 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:35.874 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:35.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:35.874 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:35.874 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:35.874 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-18 03:25:35.884 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:35.884 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:35.884 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:36.004 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:36.004 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:25:36.074 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36531 790
17-03-18 03:25:36.214 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:36.264 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:25:36.264 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:25:36.264 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:36.264 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:36.264 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:25:36.374 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 367 ms.
17-03-18 03:25:36.374 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms.
17-03-18 03:25:36.374 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:36.374 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:36.384 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 503 ms.
17-03-18 03:25:36.414 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:36.414 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:36.414 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:36.414 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:36.414 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:36.414 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:36.424 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:36.424 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:25:36.424 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:36.424 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:25:36.574 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:36.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:36.604 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:25:36.604 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:36.604 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 36531 150' command took 2 ms to send, 1327 ms to get response, and 1334 ms overall
17-03-18 03:25:36.604 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.166929
17-03-18 03:25:36.604 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16693 mm
17-03-18 03:25:36.604 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:36.614 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 36466, sync = True, waitForSettling = False)
17-03-18 03:25:36.614 -07 000000424 INF: Z Motor: Moving to -0.166931 mm, started at -0.166423 mm, distance = -0.51 um
17-03-18 03:25:36.614 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:25:36.614 -07 000000606 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm
17-03-18 03:25:36.614 -07 000000424 INF: FPGA: Xmit ZDACW 36466\n [Z Motor]
17-03-18 03:25:36.614 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:25:36.624 -07 000000424 INF: FPGA: 'ZDACW 36466' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:25:36.624 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:36.624 -07 000000561 INF: FPGA: Recv ZDACR 36466
17-03-18 03:25:36.634 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:36.634 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:36.634 -07 000000424 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet))
17-03-18 03:25:36.634 -07 000000455 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:25:36.644 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:25:36.644 -07 000000606 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:36.644 -07 000000606 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:36.644 -07 000000606 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:25:36.644 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:36.804 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:25:36.804 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:25:36.804 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:36.804 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:25:36.804 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:25:36.804 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:36.814 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:36.814 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:25:36.814 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:36.814 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:25:37.014 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 03:25:37.014 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:25:37.064 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:37.064 -07 000000444 INF: FPGA: Recv YRDPOS 149863
17-03-18 03:25:37.074 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:25:37.074 -07 000000606 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:37.074 -07 000000606 INF: Y Motor: Position error before settling (table move) = -35 encoder counts (-0.017 mm)
17-03-18 03:25:37.074 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.843 mm, average velocity = 2.231 mm/sec
17-03-18 03:25:38.024 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:38.024 -07 000000591 INF: FPGA: Recv YRDPOS 149863
17-03-18 03:25:38.034 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:38.034 -07 000000606 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:38.054 -07 000000606 INF: Y Motor: After move to 73.192604, error = -0.017311, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:38.054 -07 000000606 INF: Y Motor: Position error after settling (table move) = -35 encoder counts (-0.017 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:38.054 -07 000000606 INF: Y Motor: Moved to 73.1753 after 1445 ms (table move)
17-03-18 03:25:38.064 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166931 mm (DAC = 36466)
17-03-18 03:25:38.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.064 -07 000000629 INF: FPGA: Recv ZSGSRD 35273
17-03-18 03:25:38.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:25:38.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.074 -07 000000444 INF: FPGA: Recv ZSGSRD 35272
17-03-18 03:25:38.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.084 -07 000000462 INF: FPGA: Recv ZSGSRD 35283
17-03-18 03:25:38.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.094 -07 000000591 INF: FPGA: Recv ZSGSRD 35278
17-03-18 03:25:38.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.104 -07 000000618 INF: FPGA: Recv ZSGSRD 35272
17-03-18 03:25:38.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.114 -07 000000424 INF: FPGA: Recv ZSGSRD 35274
17-03-18 03:25:38.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.124 -07 000000576 INF: FPGA: Recv ZSGSRD 35271
17-03-18 03:25:38.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.134 -07 000000502 INF: FPGA: Recv ZSGSRD 35275
17-03-18 03:25:38.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.144 -07 000000590 INF: FPGA: Recv ZSGSRD 35274
17-03-18 03:25:38.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.154 -07 000000606 INF: FPGA: Recv ZSGSRD 35276
17-03-18 03:25:38.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.164 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:38.164 -07 000000579 INF: FPGA: Recv ZPIEZORD 31049
17-03-18 03:25:38.174 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.174 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.564 V. Piezo Error = -9.3 V.
17-03-18 03:25:38.174 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.9 um, Read 10 ADC samples: Avg = 35275 (-166.1 uncal um), Error = 0.9 uncal um, Median = 35274 (-166.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35271 (-166.0 uncal um), Max = 35283 (-166.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:25:38.174 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35275, posNoise = 8, negNoise = 4
17-03-18 03:25:38.174 -07 000000610 INF: Z Motor: After move to -0.166931, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:38.174 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 111 ms (allowed 150 ms), total time = 1559 ms
17-03-18 03:25:38.174 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:38.214 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-18 03:25:38.214 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:38.214 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17529296875, Z-position -0.166937435311753. ----------
17-03-18 03:25:38.214 -07 000000610 INF: Cycle	112	Tile	17	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:38.214 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36289, sync = True, waitForSettling = True)
17-03-18 03:25:38.214 -07 000000610 INF: Z Motor: Moving to -0.166120 mm, started at -0.166937 mm, distance = 0.82 um
17-03-18 03:25:38.214 -07 000000610 INF: FPGA: Xmit ZDACW 36289\n [Z Motor]
17-03-18 03:25:38.214 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:25:38.224 -07 000000610 INF: FPGA: 'ZDACW 36289' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:25:38.234 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:38.234 -07 000000444 INF: FPGA: Recv ZDACR 36289
17-03-18 03:25:38.244 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:38.244 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:38.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.394 -07 000000502 INF: FPGA: Recv ZSGSRD 35155
17-03-18 03:25:38.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:38.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.404 -07 000000424 INF: FPGA: Recv ZSGSRD 35148
17-03-18 03:25:38.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.414 -07 000000576 INF: FPGA: Recv ZSGSRD 35151
17-03-18 03:25:38.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.424 -07 000000579 INF: FPGA: Recv ZSGSRD 35149
17-03-18 03:25:38.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.434 -07 000000430 INF: FPGA: Recv ZSGSRD 35150
17-03-18 03:25:38.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.444 -07 000000606 INF: FPGA: Recv ZSGSRD 35149
17-03-18 03:25:38.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.454 -07 000000455 INF: FPGA: Recv ZSGSRD 35149
17-03-18 03:25:38.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.464 -07 000000576 INF: FPGA: Recv ZSGSRD 35147
17-03-18 03:25:38.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.474 -07 000000467 INF: FPGA: Recv ZSGSRD 35152
17-03-18 03:25:38.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:38.484 -07 000000461 INF: FPGA: Recv ZSGSRD 35148
17-03-18 03:25:38.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:38.494 -07 000000606 INF: FPGA: Recv ZPIEZORD 30856
17-03-18 03:25:38.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:38.504 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.537 V. Piezo Error = -9.5 V.
17-03-18 03:25:38.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.1 um, Read 10 ADC samples: Avg = 35150 (-165.3 uncal um), Error = 0.9 uncal um, Median = 35149 (-165.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35147 (-165.2 uncal um), Max = 35155 (-165.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:25:38.504 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35150, posNoise = 5, negNoise = 3
17-03-18 03:25:38.504 -07 000000610 INF: Z Motor: After move to -0.166120, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:38.504 -07 000000610 INF: Z Motor: MoveAbsStepped took 288 ms)
17-03-18 03:25:38.504 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:38.504 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:38.504 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:38.504 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:38.504 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:38.504 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:38.504 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:38.504 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:38.504 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:38.504 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:38.504 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:38.504 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:38.514 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:38.514 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:38.514 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:25:38.514 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:38.524 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:25:38.524 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:25:38.524 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:25:38.524 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:25:38.544 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 36466 150\n [Camera]
17-03-18 03:25:38.544 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.994908,
17-03-18 03:25:38.734 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:39.144 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:39.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:39.144 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:39.144 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:39.144 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:25:39.144 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:39.144 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:39.144 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:39.144 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:39.144 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:25:39.334 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36466 790
17-03-18 03:25:39.484 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:39.524 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:25:39.524 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:25:39.524 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:39.524 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:25:39.524 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:25:39.524 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:39.524 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:25:39.524 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:25:39.524 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:25:39.534 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:25:39.684 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:39.684 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:39.684 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:39.684 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:39.684 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:25:39.684 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:39.684 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:39.684 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:39.814 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:39.814 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:25:39.874 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:25:39.874 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:39.874 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 36466 150' command took 3 ms to send, 1324 ms to get response, and 1343 ms overall
17-03-18 03:25:39.874 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166558
17-03-18 03:25:39.874 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16656 mm
17-03-18 03:25:39.874 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:39.884 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:25:39.884 -07 000000606 INF: Y Motor: Moving to 74.0226 mm, started at 73.1753 mm, delta = 0.8473 mm
17-03-18 03:25:39.884 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:39.884 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 36385, sync = True, waitForSettling = False)
17-03-18 03:25:39.884 -07 000000467 INF: Z Motor: Moving to -0.166560 mm, started at -0.166134 mm, distance = -0.43 um
17-03-18 03:25:39.884 -07 000000579 INF: FPGA: Recv YRDPOS 149863
17-03-18 03:25:39.894 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:25:39.894 -07 000000606 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:39.894 -07 000000606 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:39.894 -07 000000606 INF: Y Motor: Moving 1356 steps-35
17-03-18 03:25:39.894 -07 000000467 INF: FPGA: Xmit ZDACW 36385\n [Z Motor]
17-03-18 03:25:39.894 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:25:39.904 -07 000000467 INF: FPGA: 'ZDACW 36385' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:25:39.904 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:39.914 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:39.914 -07 000000461 INF: FPGA: Recv ZDACR 36385
17-03-18 03:25:39.924 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:39.924 -07 000000467 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-18 03:25:40.074 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:25:40.074 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:25:40.074 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:40.084 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:40.084 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:25:40.184 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:25:40.184 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:25:40.184 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:40.184 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:40.194 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 509 ms.
17-03-18 03:25:40.284 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 03:25:40.284 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 390 ms overall
17-03-18 03:25:40.324 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:40.324 -07 000000430 INF: FPGA: Recv YRDPOS 151567
17-03-18 03:25:40.334 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:40.334 -07 000000606 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:40.334 -07 000000606 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:25:40.334 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 391 ms, distance = 0.847 mm, average velocity = 2.167 mm/sec
17-03-18 03:25:41.284 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:41.284 -07 000000462 INF: FPGA: Recv YRDPOS 151567
17-03-18 03:25:41.294 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.294 -07 000000606 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:41.314 -07 000000606 INF: Y Motor: After move to 74.022606, error = -0.015282, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:41.314 -07 000000606 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:41.314 -07 000000606 INF: Y Motor: Moved to 74.0073 after 1432 ms (table move)
17-03-18 03:25:41.314 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166560 mm (DAC = 36385)
17-03-18 03:25:41.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.314 -07 000000424 INF: FPGA: Recv ZSGSRD 35222
17-03-18 03:25:41.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:25:41.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.324 -07 000000444 INF: FPGA: Recv ZSGSRD 35211
17-03-18 03:25:41.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.334 -07 000000629 INF: FPGA: Recv ZSGSRD 35217
17-03-18 03:25:41.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.344 -07 000000430 INF: FPGA: Recv ZSGSRD 35214
17-03-18 03:25:41.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.354 -07 000000618 INF: FPGA: Recv ZSGSRD 35216
17-03-18 03:25:41.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.364 -07 000000561 INF: FPGA: Recv ZSGSRD 35225
17-03-18 03:25:41.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.374 -07 000000626 INF: FPGA: Recv ZSGSRD 35220
17-03-18 03:25:41.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.384 -07 000000579 INF: FPGA: Recv ZSGSRD 35217
17-03-18 03:25:41.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.394 -07 000000461 INF: FPGA: Recv ZSGSRD 35220
17-03-18 03:25:41.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.404 -07 000000444 INF: FPGA: Recv ZSGSRD 35217
17-03-18 03:25:41.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.414 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:41.414 -07 000000606 INF: FPGA: Recv ZPIEZORD 30945
17-03-18 03:25:41.424 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.424 -07 000000610 INF: Z Motor: Piezo is near 46.1 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.552 V. Piezo Error = -9.4 V.
17-03-18 03:25:41.424 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.6 um, Read 10 ADC samples: Avg = 35218 (-165.7 uncal um), Error = 0.9 uncal um, Median = 35217 (-165.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35211 (-165.7 uncal um), Max = 35225 (-165.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:25:41.424 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35218, posNoise = 7, negNoise = 7
17-03-18 03:25:41.424 -07 000000610 INF: Z Motor: After move to -0.166560, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:41.424 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 105 ms (allowed 150 ms), total time = 1538 ms
17-03-18 03:25:41.424 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:41.474 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1591 ms
17-03-18 03:25:41.474 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:41.474 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00732421875, Z-position -0.166571255219672. ----------
17-03-18 03:25:41.474 -07 000000610 INF: Cycle	112	Tile	18	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:41.474 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36208, sync = True, waitForSettling = True)
17-03-18 03:25:41.474 -07 000000610 INF: Z Motor: Moving to -0.165750 mm, started at -0.166571 mm, distance = 0.82 um
17-03-18 03:25:41.474 -07 000000610 INF: FPGA: Xmit ZDACW 36208\n [Z Motor]
17-03-18 03:25:41.474 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:25:41.484 -07 000000610 INF: FPGA: 'ZDACW 36208' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:25:41.484 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:41.484 -07 000000591 INF: FPGA: Recv ZDACR 36208
17-03-18 03:25:41.494 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.494 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:41.574 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:41.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:41.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.644 -07 000000512 INF: FPGA: Recv ZSGSRD 35091
17-03-18 03:25:41.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:41.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.654 -07 000000606 INF: FPGA: Recv ZSGSRD 35093
17-03-18 03:25:41.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.664 -07 000000461 INF: FPGA: Recv ZSGSRD 35088
17-03-18 03:25:41.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.674 -07 000000626 INF: FPGA: Recv ZSGSRD 35092
17-03-18 03:25:41.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.684 -07 000000629 INF: FPGA: Recv ZSGSRD 35094
17-03-18 03:25:41.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:41.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.694 -07 000000462 INF: FPGA: Recv ZSGSRD 35097
17-03-18 03:25:41.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.704 -07 000000424 INF: FPGA: Recv ZSGSRD 35091
17-03-18 03:25:41.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.714 -07 000000502 INF: FPGA: Recv ZSGSRD 35093
17-03-18 03:25:41.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.724 -07 000000618 INF: FPGA: Recv ZSGSRD 35090
17-03-18 03:25:41.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:41.734 -07 000000576 INF: FPGA: Recv ZSGSRD 35089
17-03-18 03:25:41.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.744 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:41.744 -07 000000462 INF: FPGA: Recv ZPIEZORD 30812
17-03-18 03:25:41.754 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:41.754 -07 000000610 INF: Z Motor: Piezo is near 45.8 V (nominally 0 to 100 V), expect near 55.2 V, since DAC is at 5.525 V. Piezo Error = -9.4 V.
17-03-18 03:25:41.754 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.7 um, Read 10 ADC samples: Avg = 35092 (-164.9 uncal um), Error = 0.9 uncal um, Median = 35092 (-164.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35088 (-164.9 uncal um), Max = 35097 (-164.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:25:41.754 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35092, posNoise = 5, negNoise = 4
17-03-18 03:25:41.754 -07 000000610 INF: Z Motor: After move to -0.165750, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:41.754 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 03:25:41.754 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:41.754 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:41.754 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:41.754 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:41.754 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:41.754 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:41.754 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:41.754 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:41.754 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:41.754 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:41.754 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:41.754 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:41.764 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:25:41.764 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:41.764 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:25:41.764 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:41.774 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:25:41.774 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:25:41.774 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:25:41.774 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:25:41.784 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 36385 150\n [Camera]
17-03-18 03:25:41.974 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:42.384 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:42.384 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:42.384 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:42.384 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:42.384 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:42.384 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:42.384 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:42.384 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:25:42.394 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:42.394 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:25:42.574 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36385 790
17-03-18 03:25:42.724 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:42.764 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:25:42.764 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:25:42.764 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:42.764 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:25:42.764 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:25:42.764 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:42.764 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:42.764 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:25:42.774 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:42.774 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:25:42.924 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:42.924 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:42.924 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:42.924 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:42.924 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:25:42.924 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:42.924 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:42.924 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:42.924 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:42.924 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 03:25:43.114 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:25:43.114 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:43.114 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 36385 150' command took 2 ms to send, 1327 ms to get response, and 1337 ms overall
17-03-18 03:25:43.114 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:25:43.114 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.00732421875, Z-Position -0.16576180448981. ------
17-03-18 03:25:43.124 -07 000000455 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.17159 mm
17-03-18 03:25:43.124 -07 000000455 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:43.124 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 37484, sync = True, waitForSettling = False)
17-03-18 03:25:43.124 -07 000000626 INF: Z Motor: Moving to -0.171591 mm, started at -0.165762 mm, distance = -5.83 um
17-03-18 03:25:43.124 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:25:43.124 -07 000000461 INF: Y Motor: Moving to 74.8526 mm, started at 74.0073 mm, delta = 0.8453 mm
17-03-18 03:25:43.134 -07 000000626 INF: FPGA: Xmit ZDACW 37484\n [Z Motor]
17-03-18 03:25:43.134 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:25:43.144 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:43.144 -07 000000626 INF: FPGA: 'ZDACW 37484' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:25:43.144 -07 000000569 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:25:43.154 -07 000000576 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:25:43.154 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-18 03:25:43.154 -07 000000461 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:43.154 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:25:43.154 -07 000000461 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:43.154 -07 000000461 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:25:43.164 -07 000000576 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 34 ms overall
17-03-18 03:25:43.164 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:43.164 -07 000000606 INF: FPGA: Recv ZDACR 37484
17-03-18 03:25:43.174 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:43.174 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:25:43.174 -07 000000626 INF: Z Motor: MoveAbsStepped took 42 ms (did NOT wait for settling yet))
17-03-18 03:25:43.184 -07 000000576 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:25:43.304 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:25:43.304 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:25:43.304 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:43.314 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 03:25:43.314 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:25:43.314 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:43.314 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:25:43.314 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:43.314 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:25:43.324 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:25:43.384 -07 000000629 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:25:43.384 -07 000000576 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:25:43.544 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:25:43.544 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-18 03:25:43.574 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:43.584 -07 000000502 INF: FPGA: Recv YRDPOS 153254
17-03-18 03:25:43.584 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:25:43.584 -07 000000461 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:43.584 -07 000000461 INF: Y Motor: Position error before settling (table move) = -44 encoder counts (-0.021 mm)
17-03-18 03:25:43.584 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.845 mm, average velocity = 2.145 mm/sec
17-03-18 03:25:43.914 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.99219,
17-03-18 03:25:44.534 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:44.534 -07 000000569 INF: FPGA: Recv YRDPOS 153254
17-03-18 03:25:44.544 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:44.544 -07 000000461 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:44.564 -07 000000461 INF: Y Motor: After move to 74.852608, error = -0.021553, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:44.564 -07 000000461 INF: Y Motor: Position error after settling (table move) = -44 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:44.564 -07 000000461 INF: Y Motor: Moved to 74.8311 after 1432 ms (table move)
17-03-18 03:25:44.564 -07 000000455 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171591 mm (DAC = 37484)
17-03-18 03:25:44.564 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:44.564 -07 000000579 INF: FPGA: Recv ZSGSRD 36000
17-03-18 03:25:44.574 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:25:44.574 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:44.574 -07 000000569 INF: FPGA: Recv ZSGSRD 35994
17-03-18 03:25:44.584 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:44.584 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:44.584 -07 000000561 INF: FPGA: Recv ZSGSRD 35997
17-03-18 03:25:44.594 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:44.594 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:44.594 -07 000000626 INF: FPGA: Recv ZSGSRD 35997
17-03-18 03:25:44.604 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:44.604 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:44.604 -07 000000461 INF: FPGA: Recv ZSGSRD 36001
17-03-18 03:25:44.614 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:44.614 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:44.614 -07 000000606 INF: FPGA: Recv ZSGSRD 36002
17-03-18 03:25:44.624 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:44.624 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:44.624 -07 000000430 INF: FPGA: Recv ZSGSRD 36005
17-03-18 03:25:44.634 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:44.634 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:44.634 -07 000000424 INF: FPGA: Recv ZSGSRD 36005
17-03-18 03:25:44.644 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:44.644 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:44.644 -07 000000618 INF: FPGA: Recv ZSGSRD 36001
17-03-18 03:25:44.654 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:44.654 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:44.654 -07 000000590 INF: FPGA: Recv ZSGSRD 35998
17-03-18 03:25:44.664 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:44.664 -07 000000455 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:44.664 -07 000000576 INF: FPGA: Recv ZPIEZORD 32002
17-03-18 03:25:44.674 -07 000000455 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:44.674 -07 000000455 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.720 V. Piezo Error = -8.8 V.
17-03-18 03:25:44.674 -07 000000455 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.6 um, Read 10 ADC samples: Avg = 36000 (-170.7 uncal um), Error = 0.9 uncal um, Median = 36000 (-170.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35994 (-170.7 uncal um), Max = 36005 (-170.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:25:44.674 -07 000000455 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36000, posNoise = 5, negNoise = 6
17-03-18 03:25:44.674 -07 000000455 INF: Z Motor: After move to -0.171591, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:44.674 -07 000000455 INF: Z Motor: Settle wait time = 1436 ms, measure time = 107 ms (allowed 150 ms), total time = 1543 ms
17-03-18 03:25:44.674 -07 000000455 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:44.724 -07 000000455 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-18 03:25:44.724 -07 000000455 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:44.724 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:44.724 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:44.724 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:44.724 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:44.724 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:25:44.724 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:44.724 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:44.724 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:25:44.734 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:44.734 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:25:44.744 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:25:44.744 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-18 03:25:44.744 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:25:44.794 -07 000000430 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:25:45.094 -07 000000591 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:25:45.094 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:25:45.094 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:25:45.094 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 592591928, 0x0, 559484976) start.
17-03-18 03:25:45.134 -07 000000618 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:25:45.134 -07 000000424 INF: FPGA: Recv CAMSNAP
17-03-18 03:25:45.134 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 384 ms overall
17-03-18 03:25:45.224 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 592591928, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:25:45.224 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:45.224 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:25:45.224 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-18 03:25:45.234 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:25:45.234 -07 000000502 INF: Autofocus start
17-03-18 03:25:45.234 -07 000000502 INF: MeasureProfile start
17-03-18 03:25:45.234 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:25:45.244 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:25:45.244 -07 000000591 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:25:45.244 -07 000000502 INF: MeasureProfile done
17-03-18 03:25:45.244 -07 000000502 INF: X=32  Z correction [um]=0.09220707
17-03-18 03:25:45.244 -07 000000502 INF: Autofocus finished
17-03-18 03:25:45.444 -07 000000606 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:25:45.444 -07 000000591 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:25:45.444 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.8310546875, Z-position -0.171594989114529. ----------
17-03-18 03:25:45.444 -07 000000610 INF: Cycle	112	Tile	19	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:45.454 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36017, sync = True, waitForSettling = True)
17-03-18 03:25:45.454 -07 000000610 INF: Z Motor: Moving to -0.164875 mm, started at -0.171595 mm, distance = 6.72 um
17-03-18 03:25:45.454 -07 000000610 INF: FPGA: Xmit ZDACW 36017\n [Z Motor]
17-03-18 03:25:45.454 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:25:45.464 -07 000000610 INF: FPGA: 'ZDACW 36017' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:25:45.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:45.464 -07 000000462 INF: FPGA: Recv ZDACR 36017
17-03-18 03:25:45.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:45.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:45.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:45.624 -07 000000606 INF: FPGA: Recv ZSGSRD 34957
17-03-18 03:25:45.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:45.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:45.634 -07 000000569 INF: FPGA: Recv ZSGSRD 34953
17-03-18 03:25:45.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:45.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:45.644 -07 000000444 INF: FPGA: Recv ZSGSRD 34956
17-03-18 03:25:45.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:45.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:45.654 -07 000000424 INF: FPGA: Recv ZSGSRD 34960
17-03-18 03:25:45.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:45.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:45.664 -07 000000462 INF: FPGA: Recv ZSGSRD 34956
17-03-18 03:25:45.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:45.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:45.674 -07 000000579 INF: FPGA: Recv ZSGSRD 34957
17-03-18 03:25:45.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:45.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:45.684 -07 000000629 INF: FPGA: Recv ZSGSRD 34950
17-03-18 03:25:45.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:45.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:45.694 -07 000000561 INF: FPGA: Recv ZSGSRD 34956
17-03-18 03:25:45.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:45.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:45.704 -07 000000461 INF: FPGA: Recv ZSGSRD 34959
17-03-18 03:25:45.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:45.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:45.714 -07 000000591 INF: FPGA: Recv ZSGSRD 34954
17-03-18 03:25:45.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:45.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:45.724 -07 000000430 INF: FPGA: Recv ZPIEZORD 30635
17-03-18 03:25:45.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:45.734 -07 000000610 INF: Z Motor: Piezo is near 45.4 V (nominally 0 to 100 V), expect near 55.0 V, since DAC is at 5.496 V. Piezo Error = -9.5 V.
17-03-18 03:25:45.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -164.9 um, Read 10 ADC samples: Avg = 34956 (-164.0 uncal um), Error = 0.8 uncal um, Median = 34956 (-164.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 34950 (-164.0 uncal um), Max = 34960 (-164.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:25:45.734 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34956, posNoise = 4, negNoise = 6
17-03-18 03:25:45.734 -07 000000610 INF: Z Motor: After move to -0.164875, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:45.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:25:45.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:45.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:45.734 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:45.734 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:45.734 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:45.734 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:45.734 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:45.734 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:45.734 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:45.734 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:45.734 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:45.734 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:45.744 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:45.744 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:45.744 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:25:45.744 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:45.754 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 03:25:45.754 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:25:45.754 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 03:25:45.754 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 03:25:45.754 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 36194 150\n [Camera]
17-03-18 03:25:45.954 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:46.364 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:46.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:46.364 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:46.364 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:46.364 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 03:25:46.364 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:46.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:46.364 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:46.494 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:46.494 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:25:46.554 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36194 790
17-03-18 03:25:46.574 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:46.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:46.704 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:46.744 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:25:46.744 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:25:46.744 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:46.744 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:46.744 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:25:46.864 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:25:46.864 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:25:46.864 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:46.864 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:46.874 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 508 ms.
17-03-18 03:25:46.904 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1137
17-03-18 03:25:46.904 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1137
17-03-18 03:25:46.904 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:46.904 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:25:46.904 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:25:46.914 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:46.914 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:46.914 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:25:46.914 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:46.914 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:25:47.094 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:25:47.094 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:47.094 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 36194 150' command took 4 ms to send, 1322 ms to get response, and 1334 ms overall
17-03-18 03:25:47.294 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:25:47.294 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:25:47.294 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:47.294 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:25:47.294 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:25:47.294 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:47.294 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:47.294 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:25:47.294 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:25:47.294 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:47.304 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:25:47.334 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:25:47.334 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:25:47.384 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 03:25:47.384 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-18 03:25:47.384 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:25:47.384 -07 000000606 INF: FPGA: Recv EMCUR 
17-03-18 03:25:47.394 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:47.394 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-18 03:25:47.894 -07 000000618 INF: FPGA: Recv EMIN
17-03-18 03:25:47.894 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 03:25:47.894 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-18 03:25:47.894 -07 000000606 INF: FPGA: Recv EMCUR 
17-03-18 03:25:47.904 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:25:47.904 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:25:47.904 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.8310546875, Z-Position -0.164888111638531. ------
17-03-18 03:25:47.904 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:25:47.904 -07 000000430 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13950 mm
17-03-18 03:25:47.904 -07 000000430 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:47.904 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:25:47.904 -07 000000467 INF: Y Motor: Moving to 59.9126 mm, started at 74.8311 mm, delta = -14.9184 mm
17-03-18 03:25:47.904 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:25:47.914 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:47.914 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:47.914 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 30475, sync = True, waitForSettling = False)
17-03-18 03:25:47.914 -07 000000591 INF: Z Motor: Moving to -0.139506 mm, started at -0.164888 mm, distance = 25.38 um
17-03-18 03:25:47.914 -07 000000576 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:25:47.924 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:25:47.924 -07 000000467 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:47.924 -07 000000579 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:25:47.924 -07 000000467 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-18 03:25:47.924 -07 000000467 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:25:47.934 -07 000000591 INF: FPGA: Xmit ZDACW 30475\n [Z Motor]
17-03-18 03:25:47.934 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:25:47.944 -07 000000591 INF: FPGA: 'ZDACW 30475' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:25:47.944 -07 000000467 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:25:47.954 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:47.954 -07 000000590 INF: FPGA: Recv ZDACR 30475
17-03-18 03:25:47.964 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:47.964 -07 000000591 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-18 03:25:48.124 -07 000000561 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:25:48.124 -07 000000579 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 212 ms overall
17-03-18 03:25:49.274 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.990831,
17-03-18 03:25:49.564 -07 000000561 INF: FPGA: Recv YMVTO 122702 23904
17-03-18 03:25:49.564 -07 000000467 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1619 ms to get response, and 1640 ms overall
17-03-18 03:25:49.564 -07 000000467 INF: Y Motor: Position error before settling = 1 encoder counts (0.000 mm)
17-03-18 03:25:49.564 -07 000000467 INF: Y Motor: To move from 74.832 to 59.913 (-14.918 mm) should take 23871 steps, but required 23904 steps (14.940 mm). Slippage = 0.021 mm (0.00%).
17-03-18 03:25:49.564 -07 000000467 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1641 ms, distance = 14.918 mm, average velocity = 9.091 mm/sec
17-03-18 03:25:51.574 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:51.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:52.414 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:52.414 -07 000000629 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:25:52.424 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:52.424 -07 000000467 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:52.454 -07 000000467 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:52.454 -07 000000467 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -5 counts (-0.002 mm)
17-03-18 03:25:52.454 -07 000000467 INF: Y Motor: Moved to 59.9106 after 4549 ms
17-03-18 03:25:52.464 -07 000000430 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139506 mm (DAC = 30475)
17-03-18 03:25:52.464 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:52.464 -07 000000502 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:25:52.474 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:25:52.474 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:52.474 -07 000000579 INF: FPGA: Recv ZSGSRD 31006
17-03-18 03:25:52.484 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:52.484 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:52.484 -07 000000501 INF: FPGA: Recv ZSGSRD 31005
17-03-18 03:25:52.494 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:52.494 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:52.494 -07 000000461 INF: FPGA: Recv ZSGSRD 31006
17-03-18 03:25:52.504 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:52.504 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:52.504 -07 000000424 INF: FPGA: Recv ZSGSRD 31001
17-03-18 03:25:52.514 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:52.514 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:52.514 -07 000000462 INF: FPGA: Recv ZSGSRD 31010
17-03-18 03:25:52.524 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:52.524 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:52.524 -07 000000576 INF: FPGA: Recv ZSGSRD 31012
17-03-18 03:25:52.534 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:52.534 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:52.534 -07 000000455 INF: FPGA: Recv ZSGSRD 31006
17-03-18 03:25:52.544 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:52.544 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:52.544 -07 000000444 INF: FPGA: Recv ZSGSRD 31003
17-03-18 03:25:52.554 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:52.554 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:52.554 -07 000000502 INF: FPGA: Recv ZSGSRD 31011
17-03-18 03:25:52.564 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:52.564 -07 000000430 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:52.564 -07 000000462 INF: FPGA: Recv ZPIEZORD 26479
17-03-18 03:25:52.574 -07 000000430 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:52.574 -07 000000430 INF: Z Motor: Piezo is near 36.6 V (nominally 0 to 100 V), expect near 46.5 V, since DAC is at 4.650 V. Piezo Error = -9.9 V.
17-03-18 03:25:52.574 -07 000000430 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.5 um, Read 10 ADC samples: Avg = 31007 (-138.7 uncal um), Error = 0.8 uncal um, Median = 31006 (-138.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 31001 (-138.7 uncal um), Max = 31012 (-138.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:25:52.574 -07 000000430 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31007, posNoise = 5, negNoise = 6
17-03-18 03:25:52.574 -07 000000430 INF: Z Motor: After move to -0.139506, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:52.574 -07 000000430 INF: Z Motor: Settle wait time = 4551 ms, measure time = 109 ms (allowed 150 ms), total time = 4660 ms
17-03-18 03:25:52.574 -07 000000430 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:52.624 -07 000000430 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4713 ms
17-03-18 03:25:52.624 -07 000000430 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:52.624 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:52.624 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:52.624 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:52.624 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:52.624 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:25:52.624 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:52.624 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:52.624 -07 000000618 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:25:52.654 -07 000000618 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 03:25:52.654 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:25:52.654 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:25:52.654 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:25:52.674 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 03:25:52.674 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 43 ms.
17-03-18 03:25:52.674 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:25:52.714 -07 000000462 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:25:53.014 -07 000000569 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:25:53.014 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:25:53.014 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:25:53.024 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2182910056, 0x0, 559484976) start.
17-03-18 03:25:53.054 -07 000000606 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:25:53.054 -07 000000424 INF: FPGA: Recv CAMSNAP
17-03-18 03:25:53.054 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 377 ms to get response, and 384 ms overall
17-03-18 03:25:53.134 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2182910056, 0x0, 559484976) end. Duration was 114 ms.
17-03-18 03:25:53.134 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:53.134 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:25:53.134 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-18 03:25:53.154 -07 000000591 INF: Image SNR check: start
17-03-18 03:25:53.154 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:25:53.154 -07 000000579 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:25:53.164 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:25:53.164 -07 000000561 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:25:53.164 -07 000000591 INF: Image SNR check: pass  [peak (Max-Min)=136.70]
17-03-18 03:25:53.164 -07 000000591 INF: Autofocus start
17-03-18 03:25:53.164 -07 000000591 INF: MeasureProfile start
17-03-18 03:25:53.184 -07 000000591 INF: MeasureProfile done
17-03-18 03:25:53.184 -07 000000591 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:25:53.184 -07 000000591 INF: Autofocus finished
17-03-18 03:25:53.364 -07 000000462 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:25:53.364 -07 000000561 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:25:53.364 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.139518897890717. ----------
17-03-18 03:25:53.364 -07 000000610 INF: Cycle	112	Tile	1	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:53.374 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28982, sync = True, waitForSettling = True)
17-03-18 03:25:53.374 -07 000000610 INF: Z Motor: Moving to -0.132671 mm, started at -0.139519 mm, distance = 6.85 um
17-03-18 03:25:53.374 -07 000000610 INF: FPGA: Xmit ZDACW 28982\n [Z Motor]
17-03-18 03:25:53.374 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:25:53.384 -07 000000610 INF: FPGA: 'ZDACW 28982' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.384 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:53.384 -07 000000629 INF: FPGA: Recv ZDACR 28982
17-03-18 03:25:53.394 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.394 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:53.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:53.544 -07 000000467 INF: FPGA: Recv ZSGSRD 29944
17-03-18 03:25:53.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:53.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:53.554 -07 000000579 INF: FPGA: Recv ZSGSRD 29940
17-03-18 03:25:53.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:53.564 -07 000000576 INF: FPGA: Recv ZSGSRD 29942
17-03-18 03:25:53.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:53.574 -07 000000629 INF: FPGA: Recv ZSGSRD 29940
17-03-18 03:25:53.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:53.584 -07 000000606 INF: FPGA: Recv ZSGSRD 29939
17-03-18 03:25:53.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:53.594 -07 000000424 INF: FPGA: Recv ZSGSRD 29943
17-03-18 03:25:53.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:53.604 -07 000000455 INF: FPGA: Recv ZSGSRD 29940
17-03-18 03:25:53.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:53.614 -07 000000626 INF: FPGA: Recv ZSGSRD 29939
17-03-18 03:25:53.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:53.624 -07 000000591 INF: FPGA: Recv ZSGSRD 29942
17-03-18 03:25:53.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:53.634 -07 000000461 INF: FPGA: Recv ZSGSRD 29941
17-03-18 03:25:53.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:53.644 -07 000000618 INF: FPGA: Recv ZPIEZORD 25369
17-03-18 03:25:53.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:53.654 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.422 V. Piezo Error = -10.0 V.
17-03-18 03:25:53.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29941 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29940 (-131.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 29939 (-131.9 uncal um), Max = 29944 (-131.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-18 03:25:53.654 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29941, posNoise = 3, negNoise = 2
17-03-18 03:25:53.654 -07 000000610 INF: Z Motor: After move to -0.132671, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:53.654 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 03:25:53.654 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:53.654 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:53.654 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:53.654 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:53.654 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:53.654 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:53.654 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:53.654 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:53.654 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:25:53.654 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:53.654 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:25:53.654 -07 000000461 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:25:53.654 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:25:53.664 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:53.674 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 03:25:53.674 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 03:25:53.674 -07 000000461 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-18 03:25:53.674 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:53.684 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:25:53.684 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:53.684 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:25:53.684 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 33 ms.
17-03-18 03:25:53.694 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 29159 150\n [Camera]
17-03-18 03:25:53.894 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:54.294 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:54.294 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:54.294 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:54.294 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:54.294 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:25:54.294 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:54.294 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:54.294 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:54.424 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:54.424 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) start.
17-03-18 03:25:54.484 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29159 790
17-03-18 03:25:54.634 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:54.674 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:25:54.674 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:25:54.674 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:54.674 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:54.674 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:25:54.734 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.983999,
17-03-18 03:25:54.794 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:25:54.794 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:25:54.794 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:54.794 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:54.804 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 503 ms.
17-03-18 03:25:54.834 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:54.834 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:54.834 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:54.834 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:54.834 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:54.834 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:54.844 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:54.844 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:25:54.844 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:54.844 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:25:55.024 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:25:55.024 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:55.024 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 29159 150' command took 2 ms to send, 1325 ms to get response, and 1334 ms overall
17-03-18 03:25:55.024 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.133147
17-03-18 03:25:55.024 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13315 mm
17-03-18 03:25:55.024 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:55.034 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 29086, sync = True, waitForSettling = False)
17-03-18 03:25:55.034 -07 000000629 INF: Z Motor: Moving to -0.133147 mm, started at -0.132671 mm, distance = -0.48 um
17-03-18 03:25:55.034 -07 000000629 INF: FPGA: Xmit ZDACW 29086\n [Z Motor]
17-03-18 03:25:55.034 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:25:55.034 -07 000000590 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-18 03:25:55.034 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:25:55.044 -07 000000629 INF: FPGA: 'ZDACW 29086' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:55.044 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:55.044 -07 000000461 INF: FPGA: Recv ZDACR 29086
17-03-18 03:25:55.054 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:55.054 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:55.054 -07 000000629 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-18 03:25:55.054 -07 000000618 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:25:55.064 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:25:55.064 -07 000000590 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:55.064 -07 000000590 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:55.064 -07 000000590 INF: Y Motor: Moving 1331 steps1
17-03-18 03:25:55.064 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:55.234 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 392 ms.
17-03-18 03:25:55.234 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:25:55.234 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:55.234 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 03:25:55.234 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:25:55.234 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:55.244 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:55.244 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:25:55.244 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms.
17-03-18 03:25:55.244 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 03:25:55.434 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 03:25:55.434 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:25:55.474 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:55.484 -07 000000467 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:25:55.484 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:25:55.484 -07 000000590 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:55.484 -07 000000590 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 03:25:55.484 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.832 mm, average velocity = 2.201 mm/sec
17-03-18 03:25:56.434 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:56.434 -07 000000569 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:25:56.444 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.444 -07 000000590 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:56.474 -07 000000590 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:56.474 -07 000000590 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:25:56.474 -07 000000590 INF: Y Motor: Moved to 60.7324 after 1437 ms (table move)
17-03-18 03:25:56.474 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133147 mm (DAC = 29086)
17-03-18 03:25:56.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.474 -07 000000467 INF: FPGA: Recv ZSGSRD 30013
17-03-18 03:25:56.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:25:56.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.484 -07 000000461 INF: FPGA: Recv ZSGSRD 30020
17-03-18 03:25:56.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.494 -07 000000512 INF: FPGA: Recv ZSGSRD 30017
17-03-18 03:25:56.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.504 -07 000000467 INF: FPGA: Recv ZSGSRD 30017
17-03-18 03:25:56.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.514 -07 000000502 INF: FPGA: Recv ZSGSRD 30014
17-03-18 03:25:56.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.524 -07 000000576 INF: FPGA: Recv ZSGSRD 30013
17-03-18 03:25:56.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.534 -07 000000462 INF: FPGA: Recv ZSGSRD 30011
17-03-18 03:25:56.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.544 -07 000000430 INF: FPGA: Recv ZSGSRD 30017
17-03-18 03:25:56.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.554 -07 000000467 INF: FPGA: Recv ZSGSRD 30018
17-03-18 03:25:56.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.564 -07 000000591 INF: FPGA: Recv ZSGSRD 30021
17-03-18 03:25:56.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.574 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:56.574 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:25:56.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:25:56.574 -07 000000629 INF: FPGA: Recv ZPIEZORD 25556
17-03-18 03:25:56.584 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.584 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.438 V. Piezo Error = -9.8 V.
17-03-18 03:25:56.584 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30016 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30017 (-132.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30011 (-132.3 uncal um), Max = 30021 (-132.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:25:56.584 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30016, posNoise = 5, negNoise = 5
17-03-18 03:25:56.584 -07 000000610 INF: Z Motor: After move to -0.133147, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:56.584 -07 000000610 INF: Z Motor: Settle wait time = 1441 ms, measure time = 108 ms (allowed 150 ms), total time = 1549 ms
17-03-18 03:25:56.584 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:56.634 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms
17-03-18 03:25:56.634 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:56.634 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.133152503658232. ----------
17-03-18 03:25:56.634 -07 000000610 INF: Cycle	112	Tile	2	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:25:56.634 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28909, sync = True, waitForSettling = True)
17-03-18 03:25:56.634 -07 000000610 INF: Z Motor: Moving to -0.132337 mm, started at -0.133153 mm, distance = 0.82 um
17-03-18 03:25:56.634 -07 000000610 INF: FPGA: Xmit ZDACW 28909\n [Z Motor]
17-03-18 03:25:56.634 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:25:56.644 -07 000000610 INF: FPGA: 'ZDACW 28909' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:25:56.644 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:56.644 -07 000000618 INF: FPGA: Recv ZDACR 28909
17-03-18 03:25:56.654 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.654 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:25:56.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.804 -07 000000501 INF: FPGA: Recv ZSGSRD 29896
17-03-18 03:25:56.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:25:56.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.814 -07 000000579 INF: FPGA: Recv ZSGSRD 29888
17-03-18 03:25:56.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.824 -07 000000461 INF: FPGA: Recv ZSGSRD 29892
17-03-18 03:25:56.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.834 -07 000000576 INF: FPGA: Recv ZSGSRD 29887
17-03-18 03:25:56.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.844 -07 000000444 INF: FPGA: Recv ZSGSRD 29891
17-03-18 03:25:56.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.854 -07 000000462 INF: FPGA: Recv ZSGSRD 29889
17-03-18 03:25:56.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.864 -07 000000424 INF: FPGA: Recv ZSGSRD 29894
17-03-18 03:25:56.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.874 -07 000000462 INF: FPGA: Recv ZSGSRD 29896
17-03-18 03:25:56.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.884 -07 000000626 INF: FPGA: Recv ZSGSRD 29890
17-03-18 03:25:56.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:56.894 -07 000000467 INF: FPGA: Recv ZSGSRD 29891
17-03-18 03:25:56.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.904 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:56.904 -07 000000591 INF: FPGA: Recv ZPIEZORD 25376
17-03-18 03:25:56.914 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:56.914 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.411 V. Piezo Error = -9.9 V.
17-03-18 03:25:56.914 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29891 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29891 (-131.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29887 (-131.5 uncal um), Max = 29896 (-131.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:25:56.914 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29891, posNoise = 5, negNoise = 4
17-03-18 03:25:56.914 -07 000000610 INF: Z Motor: After move to -0.132337, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:56.914 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:25:56.914 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:56.914 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:56.914 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:56.914 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:56.914 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:25:56.914 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:25:56.914 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:25:56.914 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:56.914 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:25:56.914 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:25:56.914 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:56.914 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:25:56.914 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:25:56.914 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:25:56.914 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:25:56.924 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:25:56.934 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:25:56.934 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:25:56.934 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:25:56.934 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:25:56.934 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 29086 150\n [Camera]
17-03-18 03:25:57.134 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:25:57.544 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:25:57.544 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:25:57.544 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:57.544 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:57.544 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:25:57.544 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:25:57.544 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:25:57.544 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:57.544 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:57.544 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2197586136, 0x0, 418435064) start.
17-03-18 03:25:57.734 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29086 790
17-03-18 03:25:57.884 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:25:57.944 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:25:57.944 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:25:57.944 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:57.944 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2197586136, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 03:25:57.944 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:25:57.944 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:57.954 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:57.954 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 03:25:57.954 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:57.954 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 03:25:58.084 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:25:58.084 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:25:58.084 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:25:58.084 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:25:58.084 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2233008400, 0x0, 391868352) start.
17-03-18 03:25:58.084 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:25:58.084 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:25:58.084 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:25:58.204 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:25:58.204 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) start.
17-03-18 03:25:58.274 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:25:58.274 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:25:58.274 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 29086 150' command took 2 ms to send, 1323 ms to get response, and 1335 ms overall
17-03-18 03:25:58.274 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:25:58.274 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.732421875, Z-Position -0.132349477140512. ------
17-03-18 03:25:58.274 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:25:58.274 -07 000000444 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13906 mm
17-03-18 03:25:58.274 -07 000000444 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:25:58.284 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:25:58.284 -07 000000590 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm
17-03-18 03:25:58.284 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:58.284 -07 000000430 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:25:58.284 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:25:58.284 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 30377, sync = True, waitForSettling = False)
17-03-18 03:25:58.284 -07 000000461 INF: Z Motor: Moving to -0.139057 mm, started at -0.132349 mm, distance = -6.71 um
17-03-18 03:25:58.284 -07 000000591 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:25:58.294 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:25:58.294 -07 000000590 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:58.294 -07 000000590 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:25:58.294 -07 000000590 INF: Y Motor: Moving 1344 steps-21
17-03-18 03:25:58.294 -07 000000618 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:25:58.304 -07 000000461 INF: FPGA: Xmit ZDACW 30377\n [Z Motor]
17-03-18 03:25:58.304 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:25:58.314 -07 000000461 INF: FPGA: 'ZDACW 30377' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-18 03:25:58.314 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:25:58.324 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:25:58.324 -07 000000629 INF: FPGA: Recv ZDACR 30377
17-03-18 03:25:58.334 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:58.334 -07 000000461 INF: Z Motor: MoveAbsStepped took 54 ms (did NOT wait for settling yet))
17-03-18 03:25:58.474 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2233008400, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 03:25:58.474 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:25:58.474 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:58.484 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:25:58.484 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:25:58.494 -07 000000629 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:25:58.494 -07 000000618 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 211 ms overall
17-03-18 03:25:58.594 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:25:58.594 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:25:58.594 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:25:58.594 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:25:58.604 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 515 ms.
17-03-18 03:25:58.684 -07 000000430 INF: FPGA: Recv YMVTILE
17-03-18 03:25:58.684 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:25:58.734 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:58.734 -07 000000606 INF: FPGA: Recv YRDPOS 126081
17-03-18 03:25:58.744 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:25:58.744 -07 000000590 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:58.744 -07 000000590 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:25:58.744 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.111 mm/sec
17-03-18 03:25:59.694 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:25:59.694 -07 000000579 INF: FPGA: Recv YRDPOS 126082
17-03-18 03:25:59.704 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:59.704 -07 000000590 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:25:59.724 -07 000000590 INF: Y Motor: After move to 61.572609, error = -0.009132, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:25:59.724 -07 000000590 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:25:59.724 -07 000000590 INF: Y Motor: Moved to 61.5635 after 1447 ms (table move)
17-03-18 03:25:59.734 -07 000000444 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139057 mm (DAC = 30377)
17-03-18 03:25:59.734 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:59.734 -07 000000618 INF: FPGA: Recv ZSGSRD 30939
17-03-18 03:25:59.744 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:25:59.744 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:59.744 -07 000000461 INF: FPGA: Recv ZSGSRD 30943
17-03-18 03:25:59.754 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:59.754 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:59.754 -07 000000502 INF: FPGA: Recv ZSGSRD 30939
17-03-18 03:25:59.764 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:59.764 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:59.764 -07 000000569 INF: FPGA: Recv ZSGSRD 30943
17-03-18 03:25:59.774 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:59.784 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:59.784 -07 000000501 INF: FPGA: Recv ZSGSRD 30936
17-03-18 03:25:59.794 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:25:59.794 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:59.794 -07 000000591 INF: FPGA: Recv ZSGSRD 30931
17-03-18 03:25:59.804 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:59.804 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:59.804 -07 000000618 INF: FPGA: Recv ZSGSRD 30929
17-03-18 03:25:59.814 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:59.814 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:59.814 -07 000000561 INF: FPGA: Recv ZSGSRD 30934
17-03-18 03:25:59.824 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:59.824 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:59.824 -07 000000455 INF: FPGA: Recv ZSGSRD 30938
17-03-18 03:25:59.834 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:59.834 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:25:59.834 -07 000000461 INF: FPGA: Recv ZSGSRD 30943
17-03-18 03:25:59.844 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:59.844 -07 000000444 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:25:59.844 -07 000000629 INF: FPGA: Recv ZPIEZORD 26741
17-03-18 03:25:59.854 -07 000000444 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:25:59.854 -07 000000444 INF: Z Motor: Piezo is near 37.1 V (nominally 0 to 100 V), expect near 46.4 V, since DAC is at 4.635 V. Piezo Error = -9.2 V.
17-03-18 03:25:59.854 -07 000000444 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.1 um, Read 10 ADC samples: Avg = 30938 (-138.3 uncal um), Error = 0.8 uncal um, Median = 30938 (-138.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30929 (-138.2 uncal um), Max = 30943 (-138.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:25:59.854 -07 000000444 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30938, posNoise = 5, negNoise = 9
17-03-18 03:25:59.854 -07 000000444 INF: Z Motor: After move to -0.139057, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:25:59.854 -07 000000444 INF: Z Motor: Settle wait time = 1450 ms, measure time = 119 ms (allowed 150 ms), total time = 1569 ms
17-03-18 03:25:59.854 -07 000000444 INF: Z Motor: Waiting extra 31 ms after reading position to reach expected total of 150 ms
17-03-18 03:25:59.894 -07 000000444 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-18 03:25:59.894 -07 000000444 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:25:59.894 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:25:59.894 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:25:59.894 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:25:59.894 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:25:59.894 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:25:59.894 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:25:59.894 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:25:59.894 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:25:59.904 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:25:59.904 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:25:59.914 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:25:59.914 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 03:25:59.914 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:25:59.964 -07 000000579 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:26:00.094 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.990831,
17-03-18 03:26:00.264 -07 000000561 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:26:00.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:26:00.264 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:26:00.264 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) start.
17-03-18 03:26:00.304 -07 000000424 INF: FPGA: Recv @CAMSNAP 383
17-03-18 03:26:00.304 -07 000000569 INF: FPGA: Recv CAMSNAP
17-03-18 03:26:00.304 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 385 ms to get response, and 387 ms overall
17-03-18 03:26:00.394 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:26:00.394 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:00.394 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:26:00.394 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:26:00.404 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:26:00.404 -07 000000444 INF: Autofocus start
17-03-18 03:26:00.404 -07 000000444 INF: MeasureProfile start
17-03-18 03:26:00.404 -07 000000629 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:26:00.414 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:26:00.414 -07 000000606 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:26:00.414 -07 000000444 INF: MeasureProfile done
17-03-18 03:26:00.414 -07 000000444 INF: X=16  Z correction [um]=0.0530179
17-03-18 03:26:00.414 -07 000000444 INF: Autofocus finished
17-03-18 03:26:00.614 -07 000000591 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:26:00.614 -07 000000606 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-18 03:26:00.614 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.5634765625, Z-position -0.139075627252935. ----------
17-03-18 03:26:00.614 -07 000000610 INF: Cycle	112	Tile	3	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:00.624 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28901, sync = True, waitForSettling = True)
17-03-18 03:26:00.624 -07 000000610 INF: Z Motor: Moving to -0.132300 mm, started at -0.139076 mm, distance = 6.78 um
17-03-18 03:26:00.624 -07 000000610 INF: FPGA: Xmit ZDACW 28901\n [Z Motor]
17-03-18 03:26:00.624 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:26:00.634 -07 000000610 INF: FPGA: 'ZDACW 28901' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:00.634 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:00.634 -07 000000591 INF: FPGA: Recv ZDACR 28901
17-03-18 03:26:00.644 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:00.644 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:00.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:00.794 -07 000000430 INF: FPGA: Recv ZSGSRD 29887
17-03-18 03:26:00.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:00.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:00.804 -07 000000502 INF: FPGA: Recv ZSGSRD 29884
17-03-18 03:26:00.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:00.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:00.814 -07 000000462 INF: FPGA: Recv ZSGSRD 29881
17-03-18 03:26:00.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:00.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:00.824 -07 000000455 INF: FPGA: Recv ZSGSRD 29888
17-03-18 03:26:00.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:00.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:00.834 -07 000000579 INF: FPGA: Recv ZSGSRD 29883
17-03-18 03:26:00.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:00.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:00.844 -07 000000561 INF: FPGA: Recv ZSGSRD 29887
17-03-18 03:26:00.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:00.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:00.854 -07 000000629 INF: FPGA: Recv ZSGSRD 29881
17-03-18 03:26:00.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:00.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:00.864 -07 000000576 INF: FPGA: Recv ZSGSRD 29884
17-03-18 03:26:00.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:00.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:00.874 -07 000000606 INF: FPGA: Recv ZSGSRD 29887
17-03-18 03:26:00.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:00.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:00.884 -07 000000461 INF: FPGA: Recv ZSGSRD 29885
17-03-18 03:26:00.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:00.894 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:00.894 -07 000000455 INF: FPGA: Recv ZPIEZORD 25357
17-03-18 03:26:00.904 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:00.904 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.410 V. Piezo Error = -9.9 V.
17-03-18 03:26:00.904 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29885 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29884 (-131.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29881 (-131.5 uncal um), Max = 29888 (-131.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:26:00.904 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29885, posNoise = 3, negNoise = 4
17-03-18 03:26:00.904 -07 000000610 INF: Z Motor: After move to -0.132300, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:00.904 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:26:00.904 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:00.904 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:00.904 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:00.904 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:00.904 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:00.904 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:00.904 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:00.904 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:00.904 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:00.904 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:00.904 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:00.904 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:00.904 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:00.904 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:00.914 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:26:00.914 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:00.924 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:26:00.924 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:26:00.924 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:26:00.924 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:26:00.934 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 29078 150\n [Camera]
17-03-18 03:26:01.124 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:01.534 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:01.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:01.534 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:01.534 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:01.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:01.534 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:01.544 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:01.544 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:26:01.544 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:01.544 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) start.
17-03-18 03:26:01.574 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:01.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:01.724 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29078 790
17-03-18 03:26:01.874 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:01.914 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:26:01.914 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:26:01.914 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:01.914 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:26:01.914 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:26:01.914 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:01.914 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:01.914 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:26:01.914 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:01.924 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:26:02.074 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:02.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:02.074 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:02.074 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:02.074 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:02.074 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:02.074 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:26:02.074 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:02.074 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:02.324 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:26:02.324 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:26:02.324 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:02.324 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 29078 150' command took 2 ms to send, 1385 ms to get response, and 1395 ms overall
17-03-18 03:26:02.324 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.132702
17-03-18 03:26:02.324 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13270 mm
17-03-18 03:26:02.324 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:02.334 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 28989, sync = True, waitForSettling = False)
17-03-18 03:26:02.334 -07 000000502 INF: Z Motor: Moving to -0.132703 mm, started at -0.132311 mm, distance = -0.39 um
17-03-18 03:26:02.334 -07 000000502 INF: FPGA: Xmit ZDACW 28989\n [Z Motor]
17-03-18 03:26:02.334 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:26:02.334 -07 000000462 INF: Y Motor: Moving to 62.4026 mm, started at 61.5635 mm, delta = 0.8391 mm
17-03-18 03:26:02.334 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:26:02.344 -07 000000502 INF: FPGA: 'ZDACW 28989' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:02.344 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:02.344 -07 000000444 INF: FPGA: Recv YRDPOS 126082
17-03-18 03:26:02.354 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:26:02.354 -07 000000462 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:02.354 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:02.354 -07 000000462 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:02.354 -07 000000462 INF: Y Motor: Moving 1343 steps-20
17-03-18 03:26:02.354 -07 000000618 INF: FPGA: Recv ZDACR 28989
17-03-18 03:26:02.364 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:26:02.364 -07 000000502 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 03:26:02.364 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:02.454 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:26:02.454 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:26:02.454 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:02.464 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:02.464 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:26:02.704 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:26:02.704 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 628 ms.
17-03-18 03:26:02.704 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:02.704 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:02.714 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 637 ms.
17-03-18 03:26:02.734 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:26:02.734 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:26:02.794 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:02.794 -07 000000512 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:26:02.804 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:02.804 -07 000000462 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:02.804 -07 000000462 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 03:26:02.804 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.839 mm, average velocity = 2.168 mm/sec
17-03-18 03:26:03.754 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:03.754 -07 000000501 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:26:03.764 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:03.764 -07 000000462 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:03.794 -07 000000462 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:03.794 -07 000000462 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:26:03.794 -07 000000462 INF: Y Motor: Moved to 62.3950 after 1458 ms (table move)
17-03-18 03:26:03.794 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132703 mm (DAC = 28989)
17-03-18 03:26:03.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:03.794 -07 000000455 INF: FPGA: Recv ZSGSRD 29944
17-03-18 03:26:03.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:26:03.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:03.804 -07 000000626 INF: FPGA: Recv ZSGSRD 29940
17-03-18 03:26:03.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:03.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:03.814 -07 000000444 INF: FPGA: Recv ZSGSRD 29941
17-03-18 03:26:03.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:03.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:03.824 -07 000000579 INF: FPGA: Recv ZSGSRD 29950
17-03-18 03:26:03.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:03.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:03.834 -07 000000629 INF: FPGA: Recv ZSGSRD 29945
17-03-18 03:26:03.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:03.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:03.844 -07 000000461 INF: FPGA: Recv ZSGSRD 29944
17-03-18 03:26:03.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:03.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:03.854 -07 000000467 INF: FPGA: Recv ZSGSRD 29950
17-03-18 03:26:03.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:03.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:03.864 -07 000000462 INF: FPGA: Recv ZSGSRD 29948
17-03-18 03:26:03.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:03.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:03.874 -07 000000502 INF: FPGA: Recv ZSGSRD 29952
17-03-18 03:26:03.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:03.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:03.884 -07 000000512 INF: FPGA: Recv ZSGSRD 29945
17-03-18 03:26:03.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:03.894 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:03.894 -07 000000444 INF: FPGA: Recv ZPIEZORD 25470
17-03-18 03:26:03.904 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:03.904 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.423 V. Piezo Error = -9.8 V.
17-03-18 03:26:03.904 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29946 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29945 (-131.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29940 (-131.9 uncal um), Max = 29952 (-132.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:26:03.904 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29946, posNoise = 6, negNoise = 6
17-03-18 03:26:03.904 -07 000000610 INF: Z Motor: After move to -0.132703, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:03.904 -07 000000610 INF: Z Motor: Settle wait time = 1462 ms, measure time = 107 ms (allowed 150 ms), total time = 1569 ms
17-03-18 03:26:03.904 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:03.954 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1621 ms
17-03-18 03:26:03.954 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:03.954 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.132702808808309. ----------
17-03-18 03:26:03.954 -07 000000610 INF: Cycle	112	Tile	4	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:03.954 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28812, sync = True, waitForSettling = True)
17-03-18 03:26:03.954 -07 000000610 INF: Z Motor: Moving to -0.131893 mm, started at -0.132703 mm, distance = 0.81 um
17-03-18 03:26:03.954 -07 000000610 INF: FPGA: Xmit ZDACW 28812\n [Z Motor]
17-03-18 03:26:03.954 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:26:03.964 -07 000000610 INF: FPGA: 'ZDACW 28812' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:03.964 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:03.964 -07 000000561 INF: FPGA: Recv ZDACR 28812
17-03-18 03:26:03.974 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:03.974 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:04.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:04.124 -07 000000430 INF: FPGA: Recv ZSGSRD 29820
17-03-18 03:26:04.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:04.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:04.134 -07 000000591 INF: FPGA: Recv ZSGSRD 29824
17-03-18 03:26:04.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:04.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:04.144 -07 000000502 INF: FPGA: Recv ZSGSRD 29818
17-03-18 03:26:04.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:04.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:04.154 -07 000000424 INF: FPGA: Recv ZSGSRD 29827
17-03-18 03:26:04.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:04.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:04.164 -07 000000444 INF: FPGA: Recv ZSGSRD 29823
17-03-18 03:26:04.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:04.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:04.174 -07 000000467 INF: FPGA: Recv ZSGSRD 29820
17-03-18 03:26:04.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:04.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:04.184 -07 000000462 INF: FPGA: Recv ZSGSRD 29821
17-03-18 03:26:04.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:04.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:04.194 -07 000000461 INF: FPGA: Recv ZSGSRD 29825
17-03-18 03:26:04.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:04.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:04.204 -07 000000590 INF: FPGA: Recv ZSGSRD 29818
17-03-18 03:26:04.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:04.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:04.224 -07 000000618 INF: FPGA: Recv ZSGSRD 29821
17-03-18 03:26:04.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:26:04.234 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:04.234 -07 000000591 INF: FPGA: Recv ZPIEZORD 25322
17-03-18 03:26:04.244 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:04.244 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.396 V. Piezo Error = -9.9 V.
17-03-18 03:26:04.244 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29822 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29821 (-131.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29818 (-131.1 uncal um), Max = 29827 (-131.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:26:04.244 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29822, posNoise = 5, negNoise = 4
17-03-18 03:26:04.244 -07 000000610 INF: Z Motor: After move to -0.131893, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:04.244 -07 000000610 INF: Z Motor: MoveAbsStepped took 285 ms)
17-03-18 03:26:04.244 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:04.244 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:04.244 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:04.244 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:04.244 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:04.244 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:04.244 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:04.244 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:04.244 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:04.244 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:04.244 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:04.244 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:04.244 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:04.254 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:26:04.254 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:04.254 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:04.264 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:26:04.264 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:26:04.264 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:26:04.264 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:26:04.264 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28989 150\n [Camera]
17-03-18 03:26:04.464 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:04.864 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:04.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:04.874 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:04.874 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:04.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:04.874 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:04.874 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:04.874 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 592591928, 0x0, 391868352) start.
17-03-18 03:26:04.874 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:04.874 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:26:05.064 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28989 790
17-03-18 03:26:05.214 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:26:05.244 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 03:26:05.244 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:26:05.244 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:05.254 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 592591928, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:26:05.254 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-18 03:26:05.254 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:05.254 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:05.254 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:05.254 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:26:05.264 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:26:05.404 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:05.404 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:05.404 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:05.414 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:05.414 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:05.414 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:05.414 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:05.414 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:26:05.414 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:05.414 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:26:05.454 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.027603,
17-03-18 03:26:05.594 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:26:05.594 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:05.594 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28989 150' command took 2 ms to send, 1329 ms to get response, and 1334 ms overall
17-03-18 03:26:05.604 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.132545
17-03-18 03:26:05.604 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13254 mm
17-03-18 03:26:05.604 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:05.604 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 28954, sync = True, waitForSettling = False)
17-03-18 03:26:05.604 -07 000000424 INF: Z Motor: Moving to -0.132543 mm, started at -0.131906 mm, distance = -0.64 um
17-03-18 03:26:05.604 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:26:05.604 -07 000000579 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm
17-03-18 03:26:05.604 -07 000000424 INF: FPGA: Xmit ZDACW 28954\n [Z Motor]
17-03-18 03:26:05.604 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:26:05.614 -07 000000424 INF: FPGA: 'ZDACW 28954' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:26:05.614 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:05.614 -07 000000591 INF: FPGA: Recv ZDACR 28954
17-03-18 03:26:05.624 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:05.624 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:05.624 -07 000000424 INF: Z Motor: MoveAbsStepped took 16 ms (did NOT wait for settling yet))
17-03-18 03:26:05.624 -07 000000467 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:26:05.634 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:26:05.634 -07 000000579 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:05.634 -07 000000579 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:05.634 -07 000000579 INF: Y Motor: Moving 1340 steps-16
17-03-18 03:26:05.634 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:05.794 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:26:05.794 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:26:05.794 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:05.794 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:26:05.794 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:26:05.794 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:05.794 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:05.794 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:26:05.794 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:05.804 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:26:06.004 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-18 03:26:06.004 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:26:06.054 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:06.064 -07 000000501 INF: FPGA: Recv YRDPOS 129481
17-03-18 03:26:06.074 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:06.074 -07 000000579 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:06.074 -07 000000579 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:26:06.074 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.216 mm/sec
17-03-18 03:26:06.574 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:06.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:07.024 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:07.024 -07 000000430 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:26:07.034 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.034 -07 000000579 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:07.064 -07 000000579 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:07.064 -07 000000579 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:26:07.064 -07 000000579 INF: Y Motor: Moved to 63.2236 after 1456 ms (table move)
17-03-18 03:26:07.064 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132543 mm (DAC = 28954)
17-03-18 03:26:07.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.064 -07 000000501 INF: FPGA: Recv ZSGSRD 29924
17-03-18 03:26:07.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:26:07.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.074 -07 000000606 INF: FPGA: Recv ZSGSRD 29923
17-03-18 03:26:07.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.084 -07 000000462 INF: FPGA: Recv ZSGSRD 29925
17-03-18 03:26:07.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.094 -07 000000461 INF: FPGA: Recv ZSGSRD 29929
17-03-18 03:26:07.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:07.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.104 -07 000000444 INF: FPGA: Recv ZSGSRD 29923
17-03-18 03:26:07.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.114 -07 000000590 INF: FPGA: Recv ZSGSRD 29913
17-03-18 03:26:07.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.124 -07 000000626 INF: FPGA: Recv ZSGSRD 29914
17-03-18 03:26:07.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.134 -07 000000424 INF: FPGA: Recv ZSGSRD 29928
17-03-18 03:26:07.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.144 -07 000000501 INF: FPGA: Recv ZSGSRD 29925
17-03-18 03:26:07.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.154 -07 000000444 INF: FPGA: Recv ZSGSRD 29925
17-03-18 03:26:07.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.164 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:07.164 -07 000000561 INF: FPGA: Recv ZPIEZORD 25447
17-03-18 03:26:07.174 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.174 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.418 V. Piezo Error = -9.8 V.
17-03-18 03:26:07.174 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.5 um, Read 10 ADC samples: Avg = 29923 (-131.8 uncal um), Error = 0.8 uncal um, Median = 29924 (-131.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29913 (-131.7 uncal um), Max = 29929 (-131.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:26:07.174 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29923, posNoise = 6, negNoise = 10
17-03-18 03:26:07.174 -07 000000610 INF: Z Motor: After move to -0.132543, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:07.174 -07 000000610 INF: Z Motor: Settle wait time = 1459 ms, measure time = 107 ms (allowed 150 ms), total time = 1566 ms
17-03-18 03:26:07.174 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:07.224 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1618 ms
17-03-18 03:26:07.224 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:07.224 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.132555051929048. ----------
17-03-18 03:26:07.224 -07 000000610 INF: Cycle	112	Tile	5	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:07.224 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28778, sync = True, waitForSettling = True)
17-03-18 03:26:07.224 -07 000000610 INF: Z Motor: Moving to -0.131737 mm, started at -0.132555 mm, distance = 0.82 um
17-03-18 03:26:07.224 -07 000000610 INF: FPGA: Xmit ZDACW 28778\n [Z Motor]
17-03-18 03:26:07.224 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:26:07.234 -07 000000610 INF: FPGA: 'ZDACW 28778' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:07.234 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:07.234 -07 000000590 INF: FPGA: Recv ZDACR 28778
17-03-18 03:26:07.244 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.244 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:07.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.394 -07 000000626 INF: FPGA: Recv ZSGSRD 29805
17-03-18 03:26:07.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:07.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.404 -07 000000576 INF: FPGA: Recv ZSGSRD 29793
17-03-18 03:26:07.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.414 -07 000000502 INF: FPGA: Recv ZSGSRD 29793
17-03-18 03:26:07.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.424 -07 000000444 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:26:07.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.434 -07 000000561 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:26:07.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.444 -07 000000512 INF: FPGA: Recv ZSGSRD 29798
17-03-18 03:26:07.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.454 -07 000000444 INF: FPGA: Recv ZSGSRD 29797
17-03-18 03:26:07.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.464 -07 000000579 INF: FPGA: Recv ZSGSRD 29795
17-03-18 03:26:07.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.474 -07 000000502 INF: FPGA: Recv ZSGSRD 29804
17-03-18 03:26:07.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:07.484 -07 000000424 INF: FPGA: Recv ZSGSRD 29794
17-03-18 03:26:07.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:07.494 -07 000000590 INF: FPGA: Recv ZPIEZORD 25257
17-03-18 03:26:07.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:07.504 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.391 V. Piezo Error = -10.0 V.
17-03-18 03:26:07.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29797 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29796 (-131.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29793 (-130.9 uncal um), Max = 29805 (-131.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:26:07.504 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29797, posNoise = 8, negNoise = 4
17-03-18 03:26:07.504 -07 000000610 INF: Z Motor: After move to -0.131737, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:07.504 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:26:07.504 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:07.504 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:07.504 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:07.504 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:07.504 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:07.504 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:07.504 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:07.504 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:07.504 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:07.504 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:07.504 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:07.504 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:07.504 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:26:07.504 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:07.514 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:07.514 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:07.524 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:26:07.524 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:26:07.524 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:26:07.524 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:26:07.534 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28954 150\n [Camera]
17-03-18 03:26:07.724 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:08.134 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:08.134 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:08.134 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:08.134 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:08.134 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2216660184, 0x0, 391868352) start.
17-03-18 03:26:08.134 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:08.134 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:08.134 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:08.134 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:08.134 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:26:08.324 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28954 790
17-03-18 03:26:08.474 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:08.514 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:26:08.514 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:26:08.514 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:08.514 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:08.514 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2216660184, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:26:08.524 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:26:08.524 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:08.524 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:08.524 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:26:08.524 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:26:08.674 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:08.674 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:08.674 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:08.674 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:08.674 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:26:08.674 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:08.674 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:08.674 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:08.674 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:08.674 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:26:08.864 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:26:08.864 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:08.864 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28954 150' command took 2 ms to send, 1324 ms to get response, and 1334 ms overall
17-03-18 03:26:08.864 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.132163
17-03-18 03:26:08.864 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13216 mm
17-03-18 03:26:08.864 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:08.864 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:26:08.864 -07 000000579 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm
17-03-18 03:26:08.864 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:08.864 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 28871, sync = True, waitForSettling = False)
17-03-18 03:26:08.864 -07 000000502 INF: Z Motor: Moving to -0.132163 mm, started at -0.131746 mm, distance = -0.42 um
17-03-18 03:26:08.874 -07 000000502 INF: FPGA: Xmit ZDACW 28871\n [Z Motor]
17-03-18 03:26:08.874 -07 000000590 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:26:08.874 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:26:08.874 -07 000000579 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:08.874 -07 000000579 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:08.874 -07 000000579 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:26:08.874 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:26:08.884 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:08.884 -07 000000502 INF: FPGA: 'ZDACW 28871' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:08.894 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:08.894 -07 000000576 INF: FPGA: Recv ZDACR 28871
17-03-18 03:26:08.904 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:26:08.904 -07 000000502 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:26:09.054 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:26:09.054 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:26:09.054 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:09.054 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:26:09.054 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:26:09.054 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:09.054 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:09.054 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:26:09.064 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:09.064 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:26:09.254 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 03:26:09.254 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 03:26:09.304 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:09.314 -07 000000467 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:26:09.314 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 4 ms to get response, and 5 ms overall
17-03-18 03:26:09.314 -07 000000579 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:09.314 -07 000000579 INF: Y Motor: Position error before settling (table move) = -12 encoder counts (-0.006 mm)
17-03-18 03:26:09.314 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.839 mm, average velocity = 2.179 mm/sec
17-03-18 03:26:10.264 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:10.264 -07 000000606 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:26:10.274 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:10.274 -07 000000579 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:10.294 -07 000000579 INF: Y Motor: After move to 64.062607, error = -0.005966, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:10.294 -07 000000579 INF: Y Motor: Position error after settling (table move) = -12 encoder counts (-0.006 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:26:10.294 -07 000000579 INF: Y Motor: Moved to 64.0566 after 1428 ms (table move)
17-03-18 03:26:10.294 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132163 mm (DAC = 28871)
17-03-18 03:26:10.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.304 -07 000000501 INF: FPGA: Recv ZSGSRD 29863
17-03-18 03:26:10.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:10.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.314 -07 000000591 INF: FPGA: Recv ZSGSRD 29860
17-03-18 03:26:10.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.324 -07 000000461 INF: FPGA: Recv ZSGSRD 29864
17-03-18 03:26:10.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.334 -07 000000606 INF: FPGA: Recv ZSGSRD 29874
17-03-18 03:26:10.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.344 -07 000000462 INF: FPGA: Recv ZSGSRD 29868
17-03-18 03:26:10.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.354 -07 000000618 INF: FPGA: Recv ZSGSRD 29861
17-03-18 03:26:10.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.364 -07 000000455 INF: FPGA: Recv ZSGSRD 29858
17-03-18 03:26:10.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.374 -07 000000424 INF: FPGA: Recv ZSGSRD 29859
17-03-18 03:26:10.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.384 -07 000000430 INF: FPGA: Recv ZSGSRD 29864
17-03-18 03:26:10.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.394 -07 000000591 INF: FPGA: Recv ZSGSRD 29862
17-03-18 03:26:10.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.404 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:10.404 -07 000000444 INF: FPGA: Recv ZPIEZORD 25380
17-03-18 03:26:10.414 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:10.414 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.405 V. Piezo Error = -9.8 V.
17-03-18 03:26:10.414 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29863 (-131.4 uncal um), Error = 0.8 uncal um, Median = 29862 (-131.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29858 (-131.4 uncal um), Max = 29874 (-131.5 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:26:10.414 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29863, posNoise = 11, negNoise = 5
17-03-18 03:26:10.414 -07 000000610 INF: Z Motor: After move to -0.132163, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:10.414 -07 000000610 INF: Z Motor: Settle wait time = 1429 ms, measure time = 112 ms (allowed 150 ms), total time = 1541 ms
17-03-18 03:26:10.414 -07 000000610 INF: Z Motor: Waiting extra 38 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:10.454 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1582 ms
17-03-18 03:26:10.454 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:10.454 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.056640625, Z-position -0.132169599200542. ----------
17-03-18 03:26:10.454 -07 000000610 INF: Cycle	112	Tile	6	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:10.454 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28694, sync = True, waitForSettling = True)
17-03-18 03:26:10.454 -07 000000610 INF: Z Motor: Moving to -0.131353 mm, started at -0.132170 mm, distance = 0.82 um
17-03-18 03:26:10.454 -07 000000610 INF: FPGA: Xmit ZDACW 28694\n [Z Motor]
17-03-18 03:26:10.454 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:26:10.464 -07 000000610 INF: FPGA: 'ZDACW 28694' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:10.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:10.464 -07 000000462 INF: FPGA: Recv ZDACR 28694
17-03-18 03:26:10.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:10.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.624 -07 000000424 INF: FPGA: Recv ZSGSRD 29739
17-03-18 03:26:10.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:10.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.634 -07 000000502 INF: FPGA: Recv ZSGSRD 29744
17-03-18 03:26:10.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.644 -07 000000462 INF: FPGA: Recv ZSGSRD 29736
17-03-18 03:26:10.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.654 -07 000000626 INF: FPGA: Recv ZSGSRD 29740
17-03-18 03:26:10.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.664 -07 000000461 INF: FPGA: Recv ZSGSRD 29738
17-03-18 03:26:10.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.674 -07 000000424 INF: FPGA: Recv ZSGSRD 29736
17-03-18 03:26:10.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.684 -07 000000467 INF: FPGA: Recv ZSGSRD 29730
17-03-18 03:26:10.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.694 -07 000000512 INF: FPGA: Recv ZSGSRD 29733
17-03-18 03:26:10.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.704 -07 000000591 INF: FPGA: Recv ZSGSRD 29742
17-03-18 03:26:10.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:10.714 -07 000000561 INF: FPGA: Recv ZSGSRD 29729
17-03-18 03:26:10.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:10.724 -07 000000629 INF: FPGA: Recv ZPIEZORD 25191
17-03-18 03:26:10.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:10.734 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.378 V. Piezo Error = -10.0 V.
17-03-18 03:26:10.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29737 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29737 (-130.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29729 (-130.5 uncal um), Max = 29744 (-130.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:26:10.734 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29737, posNoise = 7, negNoise = 8
17-03-18 03:26:10.734 -07 000000610 INF: Z Motor: After move to -0.131353, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:10.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 03:26:10.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:10.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:10.734 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:10.734 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:10.734 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:10.734 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:10.734 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:10.734 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:10.734 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:10.734 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:10.734 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:26:10.734 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:10.744 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:26:10.744 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:10.744 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:10.744 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:10.754 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:26:10.754 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:26:10.754 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:26:10.754 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:26:10.764 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28871 150\n [Camera]
17-03-18 03:26:10.814 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.031682,
17-03-18 03:26:10.954 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:11.364 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:11.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:11.364 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:11.364 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:11.364 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:26:11.364 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:11.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:11.364 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:11.364 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:11.364 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:26:11.554 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28871 790
17-03-18 03:26:11.574 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:11.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:11.704 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:26:11.744 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:26:11.744 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:26:11.744 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:26:11.744 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:11.744 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:26:11.744 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:11.744 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:11.744 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:26:11.744 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:11.754 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:26:11.904 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:11.904 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:11.904 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:12.034 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:12.034 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:12.034 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:12.034 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:12.034 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 592591928, 0x0, 391868352) start.
17-03-18 03:26:12.034 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:12.034 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:26:12.094 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:26:12.094 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:12.094 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28871 150' command took 2 ms to send, 1324 ms to get response, and 1334 ms overall
17-03-18 03:26:12.094 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:26:12.094 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.056640625, Z-Position -0.131360148470681. ------
17-03-18 03:26:12.104 -07 000000629 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13797 mm
17-03-18 03:26:12.104 -07 000000629 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:12.104 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:26:12.104 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:26:12.104 -07 000000430 INF: Y Motor: Moving to 64.8926 mm, started at 64.0566 mm, delta = 0.8360 mm
17-03-18 03:26:12.104 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 30139, sync = True, waitForSettling = False)
17-03-18 03:26:12.104 -07 000000512 INF: Z Motor: Moving to -0.137967 mm, started at -0.131360 mm, distance = -6.61 um
17-03-18 03:26:12.104 -07 000000461 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:26:12.114 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:12.114 -07 000000579 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:26:12.124 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:12.124 -07 000000444 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:26:12.134 -07 000000512 INF: FPGA: Xmit ZDACW 30139\n [Z Motor]
17-03-18 03:26:12.134 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:26:12.134 -07 000000430 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:12.134 -07 000000430 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:12.134 -07 000000430 INF: Y Motor: Moving 1338 steps-12
17-03-18 03:26:12.134 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:26:12.144 -07 000000512 INF: FPGA: 'ZDACW 30139' command took 0 ms to send, 0 ms to get response, and 34 ms overall
17-03-18 03:26:12.144 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:12.144 -07 000000462 INF: FPGA: Recv ZDACR 30139
17-03-18 03:26:12.154 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:12.154 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:12.154 -07 000000512 INF: Z Motor: MoveAbsStepped took 45 ms (did NOT wait for settling yet))
17-03-18 03:26:12.314 -07 000000590 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:26:12.314 -07 000000579 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 204 ms overall
17-03-18 03:26:12.414 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 592591928, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:26:12.414 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:26:12.414 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:26:12.414 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:12.414 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:26:12.414 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:12.424 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:12.424 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 519 ms.
17-03-18 03:26:12.424 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:12.434 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:26:12.524 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:26:12.524 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-18 03:26:12.574 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:12.584 -07 000000606 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:26:12.584 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:26:12.584 -07 000000430 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:12.584 -07 000000430 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:26:12.584 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.836 mm, average velocity = 2.116 mm/sec
17-03-18 03:26:13.534 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:13.534 -07 000000576 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:26:13.544 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:13.544 -07 000000430 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:13.564 -07 000000430 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:13.564 -07 000000430 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:26:13.564 -07 000000430 INF: Y Motor: Moved to 64.8784 after 1465 ms (table move)
17-03-18 03:26:13.574 -07 000000629 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137967 mm (DAC = 30139)
17-03-18 03:26:13.574 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:13.574 -07 000000590 INF: FPGA: Recv ZSGSRD 30777
17-03-18 03:26:13.584 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:26:13.584 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:13.584 -07 000000576 INF: FPGA: Recv ZSGSRD 30768
17-03-18 03:26:13.594 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:13.594 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:13.594 -07 000000462 INF: FPGA: Recv ZSGSRD 30767
17-03-18 03:26:13.604 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:13.604 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:13.604 -07 000000461 INF: FPGA: Recv ZSGSRD 30772
17-03-18 03:26:13.614 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:13.614 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:13.614 -07 000000455 INF: FPGA: Recv ZSGSRD 30761
17-03-18 03:26:13.624 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:13.624 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:13.624 -07 000000590 INF: FPGA: Recv ZSGSRD 30767
17-03-18 03:26:13.634 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:13.634 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:13.634 -07 000000424 INF: FPGA: Recv ZSGSRD 30761
17-03-18 03:26:13.644 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:13.644 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:13.644 -07 000000430 INF: FPGA: Recv ZSGSRD 30767
17-03-18 03:26:13.654 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:13.654 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:13.654 -07 000000461 INF: FPGA: Recv ZSGSRD 30765
17-03-18 03:26:13.664 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:13.664 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:13.664 -07 000000576 INF: FPGA: Recv ZSGSRD 30765
17-03-18 03:26:13.674 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:13.674 -07 000000629 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:13.674 -07 000000618 INF: FPGA: Recv ZPIEZORD 26575
17-03-18 03:26:13.684 -07 000000629 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:13.684 -07 000000629 INF: Z Motor: Piezo is near 36.8 V (nominally 0 to 100 V), expect near 46.0 V, since DAC is at 4.599 V. Piezo Error = -9.2 V.
17-03-18 03:26:13.684 -07 000000629 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.0 um, Read 10 ADC samples: Avg = 30767 (-137.2 uncal um), Error = 0.8 uncal um, Median = 30767 (-137.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 30761 (-137.1 uncal um), Max = 30777 (-137.2 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:26:13.684 -07 000000629 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30767, posNoise = 10, negNoise = 6
17-03-18 03:26:13.684 -07 000000629 INF: Z Motor: After move to -0.137967, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:13.684 -07 000000629 INF: Z Motor: Settle wait time = 1467 ms, measure time = 109 ms (allowed 150 ms), total time = 1576 ms
17-03-18 03:26:13.684 -07 000000629 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:13.734 -07 000000629 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1628 ms
17-03-18 03:26:13.734 -07 000000629 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:13.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:13.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:13.734 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:13.734 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:13.734 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:26:13.734 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:13.734 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:13.734 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:26:13.744 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:26:13.744 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:26:13.754 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 03:26:13.754 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-18 03:26:13.754 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:26:13.804 -07 000000444 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:26:14.104 -07 000000430 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:26:14.104 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:26:14.104 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:26:14.104 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1389170736, 0x0, 559484976) start.
17-03-18 03:26:14.144 -07 000000461 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:26:14.144 -07 000000502 INF: FPGA: Recv CAMSNAP
17-03-18 03:26:14.144 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 373 ms to get response, and 384 ms overall
17-03-18 03:26:14.234 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1389170736, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:26:14.234 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:14.234 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:26:14.234 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 03:26:14.244 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:26:14.244 -07 000000501 INF: Autofocus start
17-03-18 03:26:14.244 -07 000000501 INF: MeasureProfile start
17-03-18 03:26:14.244 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:26:14.254 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:26:14.254 -07 000000629 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:26:14.254 -07 000000501 INF: MeasureProfile done
17-03-18 03:26:14.254 -07 000000501 INF: X=32  Z correction [um]=0.1299841
17-03-18 03:26:14.254 -07 000000501 INF: Autofocus finished
17-03-18 03:26:14.454 -07 000000590 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:26:14.454 -07 000000629 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:26:14.454 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.137977086976694. ----------
17-03-18 03:26:14.464 -07 000000610 INF: Cycle	112	Tile	7	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:14.464 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28680, sync = True, waitForSettling = True)
17-03-18 03:26:14.464 -07 000000610 INF: Z Motor: Moving to -0.131289 mm, started at -0.137977 mm, distance = 6.69 um
17-03-18 03:26:14.464 -07 000000610 INF: FPGA: Xmit ZDACW 28680\n [Z Motor]
17-03-18 03:26:14.464 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:26:14.474 -07 000000610 INF: FPGA: 'ZDACW 28680' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:26:14.474 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:14.474 -07 000000461 INF: FPGA: Recv ZDACR 28680
17-03-18 03:26:14.484 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:14.484 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:14.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:14.634 -07 000000569 INF: FPGA: Recv ZSGSRD 29723
17-03-18 03:26:14.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:14.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:14.644 -07 000000424 INF: FPGA: Recv ZSGSRD 29727
17-03-18 03:26:14.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:14.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:14.654 -07 000000512 INF: FPGA: Recv ZSGSRD 29727
17-03-18 03:26:14.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:14.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:14.664 -07 000000462 INF: FPGA: Recv ZSGSRD 29726
17-03-18 03:26:14.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:14.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:14.674 -07 000000455 INF: FPGA: Recv ZSGSRD 29728
17-03-18 03:26:14.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:14.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:14.684 -07 000000629 INF: FPGA: Recv ZSGSRD 29730
17-03-18 03:26:14.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:14.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:14.694 -07 000000455 INF: FPGA: Recv ZSGSRD 29728
17-03-18 03:26:14.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:14.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:14.704 -07 000000618 INF: FPGA: Recv ZSGSRD 29727
17-03-18 03:26:14.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:14.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:14.714 -07 000000430 INF: FPGA: Recv ZSGSRD 29724
17-03-18 03:26:14.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:14.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:14.724 -07 000000629 INF: FPGA: Recv ZSGSRD 29726
17-03-18 03:26:14.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:14.734 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:14.734 -07 000000626 INF: FPGA: Recv ZPIEZORD 25227
17-03-18 03:26:14.744 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:14.744 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.376 V. Piezo Error = -9.9 V.
17-03-18 03:26:14.744 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29727 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29727 (-130.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29723 (-130.5 uncal um), Max = 29730 (-130.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:26:14.744 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29727, posNoise = 3, negNoise = 4
17-03-18 03:26:14.744 -07 000000610 INF: Z Motor: After move to -0.131289, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:14.744 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:26:14.744 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:14.744 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:14.744 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:14.744 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:14.744 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:14.744 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:14.744 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:14.744 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:14.744 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:14.744 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:14.744 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:14.744 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:14.754 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:26:14.754 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:26:14.754 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:14.754 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:14.764 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:26:14.764 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:26:14.764 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:26:14.764 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:26:14.764 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28856 150\n [Camera]
17-03-18 03:26:14.964 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:15.364 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:15.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:15.374 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:15.374 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:15.374 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:15.374 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:15.374 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:15.374 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:26:15.374 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:15.374 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:26:15.564 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28856 790
17-03-18 03:26:15.714 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:15.754 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:26:15.754 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:26:15.754 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:15.754 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:15.754 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:26:15.754 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:26:15.754 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:15.754 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:15.754 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:26:15.764 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:26:15.974 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:15.974 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:15.974 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:15.974 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:15.974 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:15.974 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:15.974 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:15.974 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:26:15.984 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:15.984 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 592591928, 0x0, 391868352) start.
17-03-18 03:26:16.094 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:26:16.094 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:16.094 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28856 150' command took 2 ms to send, 1329 ms to get response, and 1334 ms overall
17-03-18 03:26:16.104 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.131923
17-03-18 03:26:16.104 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13192 mm
17-03-18 03:26:16.104 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:16.104 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:26:16.104 -07 000000502 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm
17-03-18 03:26:16.104 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 28819, sync = True, waitForSettling = False)
17-03-18 03:26:16.104 -07 000000561 INF: Z Motor: Moving to -0.131925 mm, started at -0.131296 mm, distance = -0.63 um
17-03-18 03:26:16.104 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:16.104 -07 000000462 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:26:16.114 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:26:16.114 -07 000000502 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:16.114 -07 000000502 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:16.114 -07 000000502 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:26:16.114 -07 000000561 INF: FPGA: Xmit ZDACW 28819\n [Z Motor]
17-03-18 03:26:16.114 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:26:16.124 -07 000000561 INF: FPGA: 'ZDACW 28819' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:26:16.124 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:16.124 -07 000000462 INF: FPGA: Recv ZDACR 28819
17-03-18 03:26:16.134 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:16.134 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:16.134 -07 000000561 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:26:16.284 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.020806,
17-03-18 03:26:16.354 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:26:16.354 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:26:16.354 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:16.364 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 592591928, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:26:16.364 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:26:16.364 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:16.364 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:16.364 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:16.364 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:26:16.374 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:26:16.504 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:26:16.504 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 398 ms overall
17-03-18 03:26:16.554 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:16.554 -07 000000606 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:26:16.564 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:16.564 -07 000000502 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:16.564 -07 000000502 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:26:16.564 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.844 mm, average velocity = 2.116 mm/sec
17-03-18 03:26:16.574 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:16.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:17.514 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:17.514 -07 000000629 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:26:17.524 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:17.524 -07 000000502 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:17.554 -07 000000502 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:17.554 -07 000000502 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:26:17.554 -07 000000502 INF: Y Motor: Moved to 65.7134 after 1452 ms (table move)
17-03-18 03:26:17.554 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131925 mm (DAC = 28819)
17-03-18 03:26:17.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.564 -07 000000467 INF: FPGA: Recv ZSGSRD 29826
17-03-18 03:26:17.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:26:17.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.564 -07 000000579 INF: FPGA: Recv ZSGSRD 29831
17-03-18 03:26:17.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:17.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.574 -07 000000626 INF: FPGA: Recv ZSGSRD 29834
17-03-18 03:26:17.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.584 -07 000000606 INF: FPGA: Recv ZSGSRD 29822
17-03-18 03:26:17.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.594 -07 000000462 INF: FPGA: Recv ZSGSRD 29826
17-03-18 03:26:17.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.604 -07 000000444 INF: FPGA: Recv ZSGSRD 29827
17-03-18 03:26:17.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.614 -07 000000424 INF: FPGA: Recv ZSGSRD 29824
17-03-18 03:26:17.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.624 -07 000000629 INF: FPGA: Recv ZSGSRD 29823
17-03-18 03:26:17.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.634 -07 000000501 INF: FPGA: Recv ZSGSRD 29824
17-03-18 03:26:17.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.644 -07 000000618 INF: FPGA: Recv ZSGSRD 29830
17-03-18 03:26:17.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.654 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:17.654 -07 000000590 INF: FPGA: Recv ZPIEZORD 25389
17-03-18 03:26:17.664 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.664 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.397 V. Piezo Error = -9.7 V.
17-03-18 03:26:17.664 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29827 (-131.2 uncal um), Error = 0.8 uncal um, Median = 29826 (-131.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29822 (-131.1 uncal um), Max = 29834 (-131.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:26:17.664 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29827, posNoise = 7, negNoise = 5
17-03-18 03:26:17.664 -07 000000610 INF: Z Motor: After move to -0.131925, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:17.664 -07 000000610 INF: Z Motor: Settle wait time = 1454 ms, measure time = 103 ms (allowed 150 ms), total time = 1557 ms
17-03-18 03:26:17.664 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:17.714 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1608 ms
17-03-18 03:26:17.714 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:17.714 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.131938327563439. ----------
17-03-18 03:26:17.714 -07 000000610 INF: Cycle	112	Tile	8	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:17.714 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28642, sync = True, waitForSettling = True)
17-03-18 03:26:17.714 -07 000000610 INF: Z Motor: Moving to -0.131115 mm, started at -0.131938 mm, distance = 0.82 um
17-03-18 03:26:17.714 -07 000000610 INF: FPGA: Xmit ZDACW 28642\n [Z Motor]
17-03-18 03:26:17.714 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:26:17.724 -07 000000610 INF: FPGA: 'ZDACW 28642' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:26:17.724 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:17.724 -07 000000629 INF: FPGA: Recv ZDACR 28642
17-03-18 03:26:17.734 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.734 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:17.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.884 -07 000000461 INF: FPGA: Recv ZSGSRD 29702
17-03-18 03:26:17.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:17.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.894 -07 000000618 INF: FPGA: Recv ZSGSRD 29701
17-03-18 03:26:17.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.904 -07 000000590 INF: FPGA: Recv ZSGSRD 29702
17-03-18 03:26:17.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.914 -07 000000501 INF: FPGA: Recv ZSGSRD 29703
17-03-18 03:26:17.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.924 -07 000000561 INF: FPGA: Recv ZSGSRD 29705
17-03-18 03:26:17.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.934 -07 000000606 INF: FPGA: Recv ZSGSRD 29698
17-03-18 03:26:17.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.944 -07 000000579 INF: FPGA: Recv ZSGSRD 29699
17-03-18 03:26:17.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.954 -07 000000455 INF: FPGA: Recv ZSGSRD 29703
17-03-18 03:26:17.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.964 -07 000000424 INF: FPGA: Recv ZSGSRD 29697
17-03-18 03:26:17.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:17.974 -07 000000629 INF: FPGA: Recv ZSGSRD 29706
17-03-18 03:26:17.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.984 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:17.984 -07 000000461 INF: FPGA: Recv ZPIEZORD 25217
17-03-18 03:26:17.994 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:17.994 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.370 V. Piezo Error = -9.8 V.
17-03-18 03:26:17.994 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.1 um, Read 10 ADC samples: Avg = 29702 (-130.4 uncal um), Error = 0.8 uncal um, Median = 29702 (-130.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29697 (-130.3 uncal um), Max = 29706 (-130.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:26:17.994 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29702, posNoise = 4, negNoise = 5
17-03-18 03:26:17.994 -07 000000610 INF: Z Motor: After move to -0.131115, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:17.994 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:26:17.994 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:17.994 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:17.994 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:17.994 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:17.994 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:17.994 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:17.994 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:17.994 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:17.994 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:26:17.994 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:17.994 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:17.994 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:18.004 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:18.004 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:18.004 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:26:18.004 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:18.014 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:26:18.014 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:26:18.014 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:26:18.014 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:26:18.024 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28819 150\n [Camera]
17-03-18 03:26:18.214 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:18.624 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:18.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:18.624 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:18.624 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:18.624 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:26:18.624 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:18.624 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:18.624 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:18.624 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:18.624 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:26:18.814 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28819 791
17-03-18 03:26:18.964 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:19.004 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:26:19.004 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:26:19.004 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:19.004 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:26:19.004 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:26:19.004 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:19.004 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:19.004 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:26:19.004 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:19.014 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:26:19.164 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:19.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:19.164 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:19.164 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:19.164 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:26:19.164 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:19.164 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:19.164 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:19.284 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:19.284 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) start.
17-03-18 03:26:19.354 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:26:19.354 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:19.354 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28819 150' command took 2 ms to send, 1324 ms to get response, and 1334 ms overall
17-03-18 03:26:19.354 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.131449
17-03-18 03:26:19.354 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13145 mm
17-03-18 03:26:19.354 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:19.354 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:26:19.354 -07 000000606 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm
17-03-18 03:26:19.354 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:19.354 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 28715, sync = True, waitForSettling = False)
17-03-18 03:26:19.354 -07 000000590 INF: Z Motor: Moving to -0.131449 mm, started at -0.131135 mm, distance = -0.31 um
17-03-18 03:26:19.364 -07 000000590 INF: FPGA: Xmit ZDACW 28715\n [Z Motor]
17-03-18 03:26:19.364 -07 000000430 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:26:19.364 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:26:19.364 -07 000000606 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:19.364 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:26:19.364 -07 000000606 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:19.364 -07 000000606 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:26:19.374 -07 000000590 INF: FPGA: 'ZDACW 28715' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:19.374 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:19.384 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:19.384 -07 000000444 INF: FPGA: Recv ZDACR 28715
17-03-18 03:26:19.394 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:26:19.394 -07 000000590 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:26:19.544 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:26:19.544 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:26:19.544 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:19.554 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:19.554 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:26:19.664 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:26:19.664 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:26:19.664 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:19.664 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:26:19.674 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 508 ms.
17-03-18 03:26:19.744 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-18 03:26:19.744 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:26:19.794 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:19.794 -07 000000430 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:26:19.804 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:19.804 -07 000000606 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:19.804 -07 000000606 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:26:19.804 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.839 mm, average velocity = 2.220 mm/sec
17-03-18 03:26:20.754 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:20.754 -07 000000576 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:26:20.764 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:20.764 -07 000000606 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:20.794 -07 000000606 INF: Y Motor: After move to 66.552605, error = -0.014030, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:20.794 -07 000000606 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:26:20.794 -07 000000606 INF: Y Motor: Moved to 66.5386 after 1432 ms (table move)
17-03-18 03:26:20.794 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131449 mm (DAC = 28715)
17-03-18 03:26:20.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:20.794 -07 000000618 INF: FPGA: Recv ZSGSRD 29758
17-03-18 03:26:20.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:26:20.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:20.804 -07 000000569 INF: FPGA: Recv ZSGSRD 29756
17-03-18 03:26:20.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:20.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:20.814 -07 000000444 INF: FPGA: Recv ZSGSRD 29755
17-03-18 03:26:20.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:20.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:20.824 -07 000000579 INF: FPGA: Recv ZSGSRD 29753
17-03-18 03:26:20.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:20.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:20.834 -07 000000455 INF: FPGA: Recv ZSGSRD 29750
17-03-18 03:26:20.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:20.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:20.844 -07 000000629 INF: FPGA: Recv ZSGSRD 29750
17-03-18 03:26:20.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:20.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:20.854 -07 000000569 INF: FPGA: Recv ZSGSRD 29746
17-03-18 03:26:20.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:20.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:20.864 -07 000000561 INF: FPGA: Recv ZSGSRD 29752
17-03-18 03:26:20.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:20.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:20.874 -07 000000591 INF: FPGA: Recv ZSGSRD 29751
17-03-18 03:26:20.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:20.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:20.884 -07 000000576 INF: FPGA: Recv ZSGSRD 29753
17-03-18 03:26:20.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:20.894 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:20.894 -07 000000430 INF: FPGA: Recv ZPIEZORD 25312
17-03-18 03:26:20.904 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:20.904 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.382 V. Piezo Error = -9.7 V.
17-03-18 03:26:20.904 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29752 (-130.7 uncal um), Error = 0.8 uncal um, Median = 29752 (-130.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29746 (-130.6 uncal um), Max = 29758 (-130.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:26:20.904 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29752, posNoise = 6, negNoise = 6
17-03-18 03:26:20.904 -07 000000610 INF: Z Motor: After move to -0.131449, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:20.904 -07 000000610 INF: Z Motor: Settle wait time = 1434 ms, measure time = 106 ms (allowed 150 ms), total time = 1540 ms
17-03-18 03:26:20.904 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:20.954 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-18 03:26:20.954 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:20.954 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53857421875, Z-position -0.131456511652807. ----------
17-03-18 03:26:20.954 -07 000000610 INF: Cycle	112	Tile	9	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:20.954 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28538, sync = True, waitForSettling = True)
17-03-18 03:26:20.954 -07 000000610 INF: Z Motor: Moving to -0.130639 mm, started at -0.131457 mm, distance = 0.82 um
17-03-18 03:26:20.954 -07 000000610 INF: FPGA: Xmit ZDACW 28538\n [Z Motor]
17-03-18 03:26:20.954 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:26:20.964 -07 000000610 INF: FPGA: 'ZDACW 28538' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:26:20.964 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:20.964 -07 000000444 INF: FPGA: Recv ZDACR 28538
17-03-18 03:26:20.974 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:20.974 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:21.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:21.124 -07 000000618 INF: FPGA: Recv ZSGSRD 29634
17-03-18 03:26:21.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:21.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:21.134 -07 000000606 INF: FPGA: Recv ZSGSRD 29628
17-03-18 03:26:21.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:21.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:21.144 -07 000000430 INF: FPGA: Recv ZSGSRD 29630
17-03-18 03:26:21.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:21.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:21.154 -07 000000591 INF: FPGA: Recv ZSGSRD 29625
17-03-18 03:26:21.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:21.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:21.164 -07 000000626 INF: FPGA: Recv ZSGSRD 29623
17-03-18 03:26:21.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:21.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:21.174 -07 000000629 INF: FPGA: Recv ZSGSRD 29624
17-03-18 03:26:21.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:21.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:21.184 -07 000000512 INF: FPGA: Recv ZSGSRD 29623
17-03-18 03:26:21.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:21.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:21.194 -07 000000561 INF: FPGA: Recv ZSGSRD 29632
17-03-18 03:26:21.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:21.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:21.204 -07 000000424 INF: FPGA: Recv ZSGSRD 29632
17-03-18 03:26:21.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:21.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:21.214 -07 000000444 INF: FPGA: Recv ZSGSRD 29628
17-03-18 03:26:21.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:21.224 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:21.224 -07 000000462 INF: FPGA: Recv ZPIEZORD 25127
17-03-18 03:26:21.234 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:21.234 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.355 V. Piezo Error = -9.9 V.
17-03-18 03:26:21.234 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29628 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29628 (-129.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29623 (-129.8 uncal um), Max = 29634 (-129.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:26:21.234 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29628, posNoise = 6, negNoise = 5
17-03-18 03:26:21.234 -07 000000610 INF: Z Motor: After move to -0.130639, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:21.234 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:26:21.234 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:21.234 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:21.234 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:21.234 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:21.234 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:21.234 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:21.234 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:21.234 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:21.234 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:21.234 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:21.234 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:21.234 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:21.244 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:26:21.244 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:21.244 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:26:21.244 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:21.254 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:26:21.254 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:26:21.254 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:26:21.254 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 24 ms.
17-03-18 03:26:21.264 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28715 150\n [Camera]
17-03-18 03:26:21.464 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:21.574 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:21.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:21.644 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.99219,
17-03-18 03:26:21.864 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:21.864 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:21.864 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:21.864 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:21.864 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:21.874 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:21.874 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:26:21.874 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:21.874 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:21.874 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:26:22.054 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28715 790
17-03-18 03:26:22.204 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:22.244 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:26:22.244 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:26:22.244 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:22.254 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:22.254 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:26:22.254 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:26:22.254 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:26:22.254 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:22.254 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:22.264 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:26:22.404 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:22.404 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:22.404 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:22.404 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:22.404 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:26:22.404 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:22.404 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:22.404 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:22.404 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:22.404 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:26:22.594 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:26:22.594 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:22.594 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28715 150' command took 2 ms to send, 1325 ms to get response, and 1334 ms overall
17-03-18 03:26:22.594 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131562
17-03-18 03:26:22.594 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13156 mm
17-03-18 03:26:22.594 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:22.594 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:26:22.594 -07 000000576 INF: Y Motor: Moving to 67.3826 mm, started at 66.5386 mm, delta = 0.8440 mm
17-03-18 03:26:22.594 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 28740, sync = True, waitForSettling = False)
17-03-18 03:26:22.604 -07 000000455 INF: Z Motor: Moving to -0.131563 mm, started at -0.130660 mm, distance = -0.90 um
17-03-18 03:26:22.604 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:22.604 -07 000000444 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:26:22.614 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:22.614 -07 000000576 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:22.614 -07 000000576 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:22.614 -07 000000576 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:26:22.614 -07 000000455 INF: FPGA: Xmit ZDACW 28740\n [Z Motor]
17-03-18 03:26:22.614 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:26:22.624 -07 000000455 INF: FPGA: 'ZDACW 28740' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:26:22.624 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:22.624 -07 000000590 INF: FPGA: Recv ZDACR 28740
17-03-18 03:26:22.634 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:22.634 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:22.634 -07 000000455 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:26:22.784 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:26:22.784 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:26:22.784 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:22.794 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:26:22.794 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:26:22.794 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:22.794 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:22.794 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:22.794 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:26:22.804 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:26:23.014 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:26:23.014 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 400 ms overall
17-03-18 03:26:23.064 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:23.074 -07 000000629 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:26:23.074 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:26:23.074 -07 000000576 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:23.074 -07 000000576 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm)
17-03-18 03:26:23.074 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.844 mm, average velocity = 2.110 mm/sec
17-03-18 03:26:24.024 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:24.024 -07 000000618 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:26:24.034 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:24.034 -07 000000576 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:24.054 -07 000000576 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:24.054 -07 000000576 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:26:24.054 -07 000000576 INF: Y Motor: Moved to 67.3716 after 1459 ms (table move)
17-03-18 03:26:24.064 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131563 mm (DAC = 28740)
17-03-18 03:26:24.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.064 -07 000000424 INF: FPGA: Recv ZSGSRD 29763
17-03-18 03:26:24.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:24.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.074 -07 000000629 INF: FPGA: Recv ZSGSRD 29774
17-03-18 03:26:24.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.084 -07 000000501 INF: FPGA: Recv ZSGSRD 29771
17-03-18 03:26:24.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.094 -07 000000512 INF: FPGA: Recv ZSGSRD 29765
17-03-18 03:26:24.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.104 -07 000000444 INF: FPGA: Recv ZSGSRD 29769
17-03-18 03:26:24.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.114 -07 000000424 INF: FPGA: Recv ZSGSRD 29765
17-03-18 03:26:24.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.124 -07 000000569 INF: FPGA: Recv ZSGSRD 29769
17-03-18 03:26:24.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.134 -07 000000579 INF: FPGA: Recv ZSGSRD 29766
17-03-18 03:26:24.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.144 -07 000000629 INF: FPGA: Recv ZSGSRD 29773
17-03-18 03:26:24.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.154 -07 000000576 INF: FPGA: Recv ZSGSRD 29781
17-03-18 03:26:24.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.164 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:24.164 -07 000000461 INF: FPGA: Recv ZPIEZORD 25338
17-03-18 03:26:24.174 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.174 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.385 V. Piezo Error = -9.7 V.
17-03-18 03:26:24.174 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.6 um, Read 10 ADC samples: Avg = 29770 (-130.8 uncal um), Error = 0.8 uncal um, Median = 29769 (-130.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29763 (-130.7 uncal um), Max = 29781 (-130.9 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:26:24.174 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29770, posNoise = 11, negNoise = 7
17-03-18 03:26:24.174 -07 000000610 INF: Z Motor: After move to -0.131563, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:24.174 -07 000000610 INF: Z Motor: Settle wait time = 1461 ms, measure time = 109 ms (allowed 150 ms), total time = 1570 ms
17-03-18 03:26:24.174 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:24.224 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1622 ms
17-03-18 03:26:24.224 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:24.224 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.131572147471359. ----------
17-03-18 03:26:24.224 -07 000000610 INF: Cycle	112	Tile	10	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:24.224 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28563, sync = True, waitForSettling = True)
17-03-18 03:26:24.224 -07 000000610 INF: Z Motor: Moving to -0.130753 mm, started at -0.131572 mm, distance = 0.82 um
17-03-18 03:26:24.224 -07 000000610 INF: FPGA: Xmit ZDACW 28563\n [Z Motor]
17-03-18 03:26:24.224 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:26:24.234 -07 000000610 INF: FPGA: 'ZDACW 28563' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:26:24.234 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:24.234 -07 000000430 INF: FPGA: Recv ZDACR 28563
17-03-18 03:26:24.244 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.244 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:24.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.394 -07 000000424 INF: FPGA: Recv ZSGSRD 29642
17-03-18 03:26:24.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:24.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.404 -07 000000591 INF: FPGA: Recv ZSGSRD 29653
17-03-18 03:26:24.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.414 -07 000000606 INF: FPGA: Recv ZSGSRD 29638
17-03-18 03:26:24.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.424 -07 000000462 INF: FPGA: Recv ZSGSRD 29641
17-03-18 03:26:24.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.434 -07 000000579 INF: FPGA: Recv ZSGSRD 29646
17-03-18 03:26:24.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.444 -07 000000626 INF: FPGA: Recv ZSGSRD 29643
17-03-18 03:26:24.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.454 -07 000000569 INF: FPGA: Recv ZSGSRD 29644
17-03-18 03:26:24.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.464 -07 000000501 INF: FPGA: Recv ZSGSRD 29640
17-03-18 03:26:24.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.474 -07 000000561 INF: FPGA: Recv ZSGSRD 29648
17-03-18 03:26:24.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:24.484 -07 000000579 INF: FPGA: Recv ZSGSRD 29650
17-03-18 03:26:24.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:24.494 -07 000000455 INF: FPGA: Recv ZPIEZORD 25160
17-03-18 03:26:24.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:24.504 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.358 V. Piezo Error = -9.8 V.
17-03-18 03:26:24.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.8 um, Read 10 ADC samples: Avg = 29644 (-130.0 uncal um), Error = 0.8 uncal um, Median = 29644 (-130.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29638 (-129.9 uncal um), Max = 29653 (-130.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:26:24.504 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29644, posNoise = 9, negNoise = 6
17-03-18 03:26:24.504 -07 000000610 INF: Z Motor: After move to -0.130753, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:24.504 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:26:24.504 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:24.504 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:24.504 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:24.504 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:24.504 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:24.504 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:24.504 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:24.504 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:24.504 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:24.504 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:24.504 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:24.504 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:24.514 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:26:24.514 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:24.514 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:24.514 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:24.524 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:26:24.524 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:26:24.524 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:26:24.524 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:26:24.534 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28740 150\n [Camera]
17-03-18 03:26:24.734 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:25.134 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:25.134 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:25.134 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:25.134 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:25.134 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:26:25.134 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:25.134 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:25.134 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:25.144 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:25.144 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:26:25.324 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28740 790
17-03-18 03:26:25.474 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:25.534 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:26:25.534 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:26:25.534 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:25.534 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 03:26:25.534 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:26:25.544 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:25.544 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:26:25.544 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 03:26:25.544 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:25.554 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 03:26:25.674 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:25.674 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:25.674 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:25.674 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:25.674 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:26:25.674 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:25.674 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:25.674 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:25.674 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:25.674 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:26:25.864 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:26:25.864 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:25.864 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28740 150' command took 2 ms to send, 1325 ms to get response, and 1334 ms overall
17-03-18 03:26:25.864 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:26:25.864 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.37158203125, Z-Position -0.130762696741497. ------
17-03-18 03:26:25.874 -07 000000561 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13703 mm
17-03-18 03:26:25.874 -07 000000561 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:25.874 -07 000000467 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:26:25.874 -07 000000606 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:26:25.874 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 29935, sync = True, waitForSettling = False)
17-03-18 03:26:25.874 -07 000000629 INF: Z Motor: Moving to -0.137034 mm, started at -0.130763 mm, distance = -6.27 um
17-03-18 03:26:25.874 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:26:25.874 -07 000000626 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-18 03:26:25.884 -07 000000467 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:25.884 -07 000000629 INF: FPGA: Xmit ZDACW 29935\n [Z Motor]
17-03-18 03:26:25.884 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:26:25.894 -07 000000629 INF: FPGA: 'ZDACW 29935' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:26:25.894 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:25.894 -07 000000576 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:26:25.904 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 03:26:25.904 -07 000000626 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:25.904 -07 000000626 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:25.904 -07 000000626 INF: Y Motor: Moving 1346 steps-23
17-03-18 03:26:25.904 -07 000000467 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:26:25.914 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:25.914 -07 000000576 INF: FPGA: Recv ZDACR 29935
17-03-18 03:26:25.924 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:25.924 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:26:25.924 -07 000000629 INF: Z Motor: MoveAbsStepped took 41 ms (did NOT wait for settling yet))
17-03-18 03:26:26.054 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:26:26.054 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:26:26.054 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:26.054 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:26:26.054 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:26:26.054 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:26.054 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:26.054 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:26.054 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:26:26.064 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:26:26.104 -07 000000591 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:26:26.104 -07 000000467 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 223 ms overall
17-03-18 03:26:26.294 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:26:26.294 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:26:26.344 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:26.354 -07 000000606 INF: FPGA: Recv YRDPOS 139682
17-03-18 03:26:26.354 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:26:26.354 -07 000000626 INF: Y Motor: Encoder = 139682 = motor step 109126.6 = 68.2041 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:26.354 -07 000000626 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 03:26:26.354 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.841 mm, average velocity = 2.113 mm/sec
17-03-18 03:26:26.574 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:26.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:27.004 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.951279,
17-03-18 03:26:27.304 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:27.304 -07 000000424 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:26:27.314 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:27.314 -07 000000626 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:27.334 -07 000000626 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:27.344 -07 000000626 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:26:27.344 -07 000000626 INF: Y Motor: Moved to 68.2046 after 1460 ms (table move)
17-03-18 03:26:27.344 -07 000000561 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137034 mm (DAC = 29935)
17-03-18 03:26:27.344 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:27.344 -07 000000467 INF: FPGA: Recv ZSGSRD 30630
17-03-18 03:26:27.354 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:27.354 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:27.354 -07 000000512 INF: FPGA: Recv ZSGSRD 30627
17-03-18 03:26:27.364 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:27.364 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:27.364 -07 000000626 INF: FPGA: Recv ZSGSRD 30619
17-03-18 03:26:27.374 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:27.374 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:27.374 -07 000000430 INF: FPGA: Recv ZSGSRD 30620
17-03-18 03:26:27.384 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:27.384 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:27.384 -07 000000461 INF: FPGA: Recv ZSGSRD 30620
17-03-18 03:26:27.394 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:27.394 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:27.394 -07 000000591 INF: FPGA: Recv ZSGSRD 30615
17-03-18 03:26:27.404 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:27.404 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:27.404 -07 000000579 INF: FPGA: Recv ZSGSRD 30616
17-03-18 03:26:27.414 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:27.414 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:27.414 -07 000000576 INF: FPGA: Recv ZSGSRD 30620
17-03-18 03:26:27.424 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:27.424 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:27.424 -07 000000629 INF: FPGA: Recv ZSGSRD 30627
17-03-18 03:26:27.434 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:27.434 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:27.434 -07 000000501 INF: FPGA: Recv ZSGSRD 30623
17-03-18 03:26:27.444 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:27.444 -07 000000561 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:27.444 -07 000000591 INF: FPGA: Recv ZPIEZORD 26497
17-03-18 03:26:27.454 -07 000000561 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:27.454 -07 000000561 INF: Z Motor: Piezo is near 36.6 V (nominally 0 to 100 V), expect near 45.7 V, since DAC is at 4.568 V. Piezo Error = -9.1 V.
17-03-18 03:26:27.454 -07 000000561 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.0 um, Read 10 ADC samples: Avg = 30622 (-136.2 uncal um), Error = 0.8 uncal um, Median = 30620 (-136.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30615 (-136.2 uncal um), Max = 30630 (-136.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:26:27.454 -07 000000561 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30622, posNoise = 8, negNoise = 7
17-03-18 03:26:27.454 -07 000000561 INF: Z Motor: After move to -0.137034, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:27.454 -07 000000561 INF: Z Motor: Settle wait time = 1466 ms, measure time = 105 ms (allowed 150 ms), total time = 1571 ms
17-03-18 03:26:27.454 -07 000000561 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:27.504 -07 000000561 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1628 ms
17-03-18 03:26:27.504 -07 000000561 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:27.504 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:27.504 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:27.504 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:27.504 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:27.504 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:26:27.504 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:27.514 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:27.514 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:26:27.514 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:26:27.514 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:26:27.524 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-18 03:26:27.524 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms.
17-03-18 03:26:27.524 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:26:27.564 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:26:27.864 -07 000000501 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:26:27.864 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:26:27.864 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:26:27.994 -07 000000455 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:26:27.994 -07 000000455 INF: FPGA: Recv CAMSNAP
17-03-18 03:26:27.994 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1389170736, 0x0, 559484976) start.
17-03-18 03:26:27.994 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 461 ms to get response, and 467 ms overall
17-03-18 03:26:28.114 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1389170736, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:26:28.114 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:28.114 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:26:28.114 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 250 ms.
17-03-18 03:26:28.194 -07 000000502 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:26:28.194 -07 000000430 INF: Autofocus start
17-03-18 03:26:28.194 -07 000000430 INF: MeasureProfile start
17-03-18 03:26:28.194 -07 000000590 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:26:28.204 -07 000000502 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:26:28.204 -07 000000502 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:26:28.204 -07 000000430 INF: MeasureProfile done
17-03-18 03:26:28.204 -07 000000430 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:26:28.204 -07 000000430 INF: Autofocus finished
17-03-18 03:26:28.404 -07 000000606 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:26:28.404 -07 000000502 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 204 ms overall
17-03-18 03:26:28.404 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.137045576216139. ----------
17-03-18 03:26:28.414 -07 000000610 INF: Cycle	112	Tile	11	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:28.414 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28442, sync = True, waitForSettling = True)
17-03-18 03:26:28.414 -07 000000610 INF: Z Motor: Moving to -0.130199 mm, started at -0.137046 mm, distance = 6.85 um
17-03-18 03:26:28.414 -07 000000610 INF: FPGA: Xmit ZDACW 28442\n [Z Motor]
17-03-18 03:26:28.414 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:26:28.424 -07 000000610 INF: FPGA: 'ZDACW 28442' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:26:28.424 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:28.424 -07 000000626 INF: FPGA: Recv ZDACR 28442
17-03-18 03:26:28.434 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:28.434 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:28.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:28.584 -07 000000512 INF: FPGA: Recv ZSGSRD 29559
17-03-18 03:26:28.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:28.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:28.594 -07 000000569 INF: FPGA: Recv ZSGSRD 29560
17-03-18 03:26:28.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:28.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:28.604 -07 000000501 INF: FPGA: Recv ZSGSRD 29559
17-03-18 03:26:28.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:28.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:28.614 -07 000000579 INF: FPGA: Recv ZSGSRD 29557
17-03-18 03:26:28.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:28.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:28.624 -07 000000424 INF: FPGA: Recv ZSGSRD 29552
17-03-18 03:26:28.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:28.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:28.634 -07 000000462 INF: FPGA: Recv ZSGSRD 29559
17-03-18 03:26:28.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:28.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:28.644 -07 000000461 INF: FPGA: Recv ZSGSRD 29554
17-03-18 03:26:28.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:28.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:28.654 -07 000000576 INF: FPGA: Recv ZSGSRD 29556
17-03-18 03:26:28.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:28.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:28.664 -07 000000579 INF: FPGA: Recv ZSGSRD 29560
17-03-18 03:26:28.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:28.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:28.674 -07 000000626 INF: FPGA: Recv ZSGSRD 29563
17-03-18 03:26:28.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:28.684 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:28.684 -07 000000591 INF: FPGA: Recv ZPIEZORD 25094
17-03-18 03:26:28.694 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:28.694 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.340 V. Piezo Error = -9.8 V.
17-03-18 03:26:28.694 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.2 um, Read 10 ADC samples: Avg = 29558 (-129.4 uncal um), Error = 0.8 uncal um, Median = 29559 (-129.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29552 (-129.4 uncal um), Max = 29563 (-129.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:26:28.694 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29558, posNoise = 5, negNoise = 6
17-03-18 03:26:28.694 -07 000000610 INF: Z Motor: After move to -0.130199, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:28.694 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:26:28.694 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:28.694 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:28.694 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:28.694 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:28.694 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:28.694 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:28.694 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:28.694 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:28.694 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:28.694 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:28.694 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:28.694 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:28.704 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:26:28.704 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:28.704 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:28.704 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:28.714 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:26:28.714 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-18 03:26:28.714 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:26:28.714 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:26:28.714 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28619 150\n [Camera]
17-03-18 03:26:28.914 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:29.324 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:26:29.324 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:26:29.324 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:29.324 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:26:29.324 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:26:29.324 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:29.324 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:29.324 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:26:29.324 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:29.324 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:26:29.514 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28619 793
17-03-18 03:26:29.664 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:29.704 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 03:26:29.704 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-18 03:26:29.704 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:29.704 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:29.704 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:26:29.714 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:26:29.714 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:26:29.714 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:29.714 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:26:29.724 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:26:29.854 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:29.854 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:29.854 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:29.864 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:29.864 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:29.864 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:26:29.864 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:29.864 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:29.864 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:29.864 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:26:30.044 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:26:30.044 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:30.044 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28619 150' command took 4 ms to send, 1329 ms to get response, and 1335 ms overall
17-03-18 03:26:30.054 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.130919
17-03-18 03:26:30.054 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13092 mm
17-03-18 03:26:30.054 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:30.184 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:26:30.184 -07 000000444 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm
17-03-18 03:26:30.194 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 28599, sync = True, waitForSettling = False)
17-03-18 03:26:30.194 -07 000000467 INF: Z Motor: Moving to -0.130918 mm, started at -0.130210 mm, distance = -0.71 um
17-03-18 03:26:30.194 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:30.194 -07 000000561 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:26:30.204 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:30.204 -07 000000444 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:30.204 -07 000000444 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:30.204 -07 000000467 INF: FPGA: Xmit ZDACW 28599\n [Z Motor]
17-03-18 03:26:30.204 -07 000000444 INF: Y Motor: Moving 1341 steps-17
17-03-18 03:26:30.204 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:26:30.214 -07 000000467 INF: FPGA: 'ZDACW 28599' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:26:30.214 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:30.214 -07 000000591 INF: FPGA: Recv ZDACR 28599
17-03-18 03:26:30.224 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:30.224 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:30.224 -07 000000467 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:26:30.244 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:26:30.244 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:26:30.244 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:30.244 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:26:30.244 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:26:30.244 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:30.254 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:26:30.254 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:26:30.254 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:26:30.264 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:26:30.594 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 03:26:30.594 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:26:30.644 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:30.644 -07 000000629 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:26:30.654 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:26:30.654 -07 000000444 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:30.654 -07 000000444 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm)
17-03-18 03:26:30.654 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.111 mm/sec
17-03-18 03:26:31.574 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:31.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:31.604 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:31.604 -07 000000502 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:26:31.614 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:31.614 -07 000000444 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:31.634 -07 000000444 INF: Y Motor: After move to 69.042610, error = -0.015755, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:31.644 -07 000000444 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:26:31.644 -07 000000444 INF: Y Motor: Moved to 69.0269 after 1450 ms (table move)
17-03-18 03:26:31.644 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130918 mm (DAC = 28599)
17-03-18 03:26:31.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.644 -07 000000626 INF: FPGA: Recv ZSGSRD 29665
17-03-18 03:26:31.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:26:31.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.654 -07 000000569 INF: FPGA: Recv ZSGSRD 29670
17-03-18 03:26:31.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:31.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.664 -07 000000455 INF: FPGA: Recv ZSGSRD 29670
17-03-18 03:26:31.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:31.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.674 -07 000000424 INF: FPGA: Recv ZSGSRD 29668
17-03-18 03:26:31.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:31.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.684 -07 000000444 INF: FPGA: Recv ZSGSRD 29668
17-03-18 03:26:31.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:31.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.694 -07 000000467 INF: FPGA: Recv ZSGSRD 29668
17-03-18 03:26:31.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:31.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.704 -07 000000606 INF: FPGA: Recv ZSGSRD 29667
17-03-18 03:26:31.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:31.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.714 -07 000000618 INF: FPGA: Recv ZSGSRD 29666
17-03-18 03:26:31.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:31.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.724 -07 000000462 INF: FPGA: Recv ZSGSRD 29667
17-03-18 03:26:31.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:31.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.734 -07 000000569 INF: FPGA: Recv ZSGSRD 29669
17-03-18 03:26:31.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:31.744 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:31.744 -07 000000591 INF: FPGA: Recv ZPIEZORD 25240
17-03-18 03:26:31.754 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:31.754 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.364 V. Piezo Error = -9.7 V.
17-03-18 03:26:31.754 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29668 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29668 (-130.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 29665 (-130.1 uncal um), Max = 29670 (-130.1 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:26:31.754 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29668, posNoise = 2, negNoise = 3
17-03-18 03:26:31.754 -07 000000610 INF: Z Motor: After move to -0.130918, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:31.754 -07 000000610 INF: Z Motor: Settle wait time = 1452 ms, measure time = 109 ms (allowed 150 ms), total time = 1561 ms
17-03-18 03:26:31.754 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:31.804 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1747 ms
17-03-18 03:26:31.804 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:31.804 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02685546875, Z-position -0.130916877832899. ----------
17-03-18 03:26:31.804 -07 000000610 INF: Cycle	112	Tile	12	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:31.804 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28422, sync = True, waitForSettling = True)
17-03-18 03:26:31.804 -07 000000610 INF: Z Motor: Moving to -0.130108 mm, started at -0.130917 mm, distance = 0.81 um
17-03-18 03:26:31.804 -07 000000610 INF: FPGA: Xmit ZDACW 28422\n [Z Motor]
17-03-18 03:26:31.804 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:26:31.814 -07 000000610 INF: FPGA: 'ZDACW 28422' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:31.814 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:31.814 -07 000000591 INF: FPGA: Recv ZDACR 28422
17-03-18 03:26:31.824 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:31.824 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:31.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.974 -07 000000512 INF: FPGA: Recv ZSGSRD 29538
17-03-18 03:26:31.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:31.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.984 -07 000000576 INF: FPGA: Recv ZSGSRD 29552
17-03-18 03:26:31.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:31.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:31.994 -07 000000618 INF: FPGA: Recv ZSGSRD 29544
17-03-18 03:26:32.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:32.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:32.004 -07 000000462 INF: FPGA: Recv ZSGSRD 29539
17-03-18 03:26:32.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:32.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:32.014 -07 000000590 INF: FPGA: Recv ZSGSRD 29541
17-03-18 03:26:32.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:32.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:32.024 -07 000000512 INF: FPGA: Recv ZSGSRD 29541
17-03-18 03:26:32.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:32.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:32.034 -07 000000576 INF: FPGA: Recv ZSGSRD 29550
17-03-18 03:26:32.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:32.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:32.054 -07 000000606 INF: FPGA: Recv ZSGSRD 29545
17-03-18 03:26:32.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:26:32.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:32.064 -07 000000461 INF: FPGA: Recv ZSGSRD 29545
17-03-18 03:26:32.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:32.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:32.074 -07 000000444 INF: FPGA: Recv ZSGSRD 29544
17-03-18 03:26:32.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:32.084 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:32.084 -07 000000579 INF: FPGA: Recv ZPIEZORD 25082
17-03-18 03:26:32.094 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:32.094 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.337 V. Piezo Error = -9.8 V.
17-03-18 03:26:32.094 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.1 um, Read 10 ADC samples: Avg = 29544 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29544 (-129.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29538 (-129.3 uncal um), Max = 29552 (-129.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:26:32.094 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29544, posNoise = 8, negNoise = 6
17-03-18 03:26:32.094 -07 000000610 INF: Z Motor: After move to -0.130108, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:32.094 -07 000000610 INF: Z Motor: MoveAbsStepped took 289 ms)
17-03-18 03:26:32.094 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:32.094 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:32.094 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:32.104 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:32.104 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:32.104 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:32.104 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:32.104 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:32.104 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:32.104 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:32.104 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:32.104 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:32.104 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:26:32.104 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:32.104 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:26:32.104 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:32.124 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:26:32.124 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:26:32.124 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:26:32.124 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:26:32.124 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28599 150\n [Camera]
17-03-18 03:26:32.324 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:32.364 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.969015,
17-03-18 03:26:32.734 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:32.734 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:32.734 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:32.734 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:32.734 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:32.734 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:32.734 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:32.734 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:26:32.734 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:32.744 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:26:32.924 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28599 790
17-03-18 03:26:33.074 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:33.114 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:26:33.114 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:26:33.114 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:33.114 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:26:33.114 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:26:33.114 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:33.114 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:33.114 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:33.114 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:26:33.124 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:26:33.264 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:33.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:33.264 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:33.274 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:33.274 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:33.274 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:33.274 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:33.274 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:26:33.274 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:33.274 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:26:33.454 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:26:33.464 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:33.464 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28599 150' command took 4 ms to send, 1320 ms to get response, and 1335 ms overall
17-03-18 03:26:33.464 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.130556
17-03-18 03:26:33.464 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13056 mm
17-03-18 03:26:33.464 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:33.464 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:26:33.464 -07 000000591 INF: Y Motor: Moving to 69.8726 mm, started at 69.0269 mm, delta = 0.8458 mm
17-03-18 03:26:33.464 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:33.464 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 28520, sync = True, waitForSettling = False)
17-03-18 03:26:33.464 -07 000000501 INF: Z Motor: Moving to -0.130556 mm, started at -0.130120 mm, distance = -0.44 um
17-03-18 03:26:33.474 -07 000000512 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:26:33.474 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:26:33.474 -07 000000591 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:33.474 -07 000000591 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:33.474 -07 000000591 INF: Y Motor: Moving 1353 steps-32
17-03-18 03:26:33.474 -07 000000501 INF: FPGA: Xmit ZDACW 28520\n [Z Motor]
17-03-18 03:26:33.474 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:26:33.484 -07 000000501 INF: FPGA: 'ZDACW 28520' command took 1 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:26:33.484 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:33.494 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:33.494 -07 000000424 INF: FPGA: Recv ZDACR 28520
17-03-18 03:26:33.504 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:26:33.504 -07 000000501 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:26:33.654 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:26:33.654 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:26:33.654 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:33.654 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:26:33.654 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:26:33.654 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:33.654 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:33.664 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:33.664 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:26:33.664 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:26:33.854 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 03:26:33.854 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:26:33.904 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:33.904 -07 000000590 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:26:33.914 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:26:33.914 -07 000000591 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:33.914 -07 000000591 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:26:33.914 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.846 mm, average velocity = 2.185 mm/sec
17-03-18 03:26:34.864 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:34.864 -07 000000424 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:26:34.874 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:34.874 -07 000000591 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:34.894 -07 000000591 INF: Y Motor: After move to 69.872612, error = -0.009819, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:34.894 -07 000000591 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:26:34.894 -07 000000591 INF: Y Motor: Moved to 69.8628 after 1432 ms (table move)
17-03-18 03:26:34.904 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130556 mm (DAC = 28520)
17-03-18 03:26:34.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:34.904 -07 000000467 INF: FPGA: Recv ZSGSRD 29613
17-03-18 03:26:34.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:26:34.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:34.914 -07 000000576 INF: FPGA: Recv ZSGSRD 29605
17-03-18 03:26:34.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:34.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:34.924 -07 000000579 INF: FPGA: Recv ZSGSRD 29619
17-03-18 03:26:34.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:34.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:34.934 -07 000000424 INF: FPGA: Recv ZSGSRD 29616
17-03-18 03:26:34.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:34.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:34.944 -07 000000569 INF: FPGA: Recv ZSGSRD 29610
17-03-18 03:26:34.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:34.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:34.954 -07 000000444 INF: FPGA: Recv ZSGSRD 29611
17-03-18 03:26:34.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:34.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:34.964 -07 000000462 INF: FPGA: Recv ZSGSRD 29609
17-03-18 03:26:34.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:34.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:34.974 -07 000000512 INF: FPGA: Recv ZSGSRD 29613
17-03-18 03:26:34.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:34.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:34.984 -07 000000590 INF: FPGA: Recv ZSGSRD 29615
17-03-18 03:26:34.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:34.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:34.994 -07 000000462 INF: FPGA: Recv ZSGSRD 29615
17-03-18 03:26:35.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.004 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:35.004 -07 000000629 INF: FPGA: Recv ZPIEZORD 25177
17-03-18 03:26:35.014 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.014 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.352 V. Piezo Error = -9.7 V.
17-03-18 03:26:35.014 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29613 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29613 (-129.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29605 (-129.7 uncal um), Max = 29619 (-129.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:26:35.014 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29613, posNoise = 6, negNoise = 8
17-03-18 03:26:35.014 -07 000000610 INF: Z Motor: After move to -0.130556, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:35.014 -07 000000610 INF: Z Motor: Settle wait time = 1434 ms, measure time = 109 ms (allowed 150 ms), total time = 1543 ms
17-03-18 03:26:35.014 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:35.064 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-18 03:26:35.064 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:35.064 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86279296875, Z-position -0.130563546165102. ----------
17-03-18 03:26:35.064 -07 000000610 INF: Cycle	112	Tile	13	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:35.064 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28343, sync = True, waitForSettling = True)
17-03-18 03:26:35.064 -07 000000610 INF: Z Motor: Moving to -0.129746 mm, started at -0.130564 mm, distance = 0.82 um
17-03-18 03:26:35.064 -07 000000610 INF: FPGA: Xmit ZDACW 28343\n [Z Motor]
17-03-18 03:26:35.064 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:26:35.074 -07 000000610 INF: FPGA: 'ZDACW 28343' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:35.074 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:35.074 -07 000000569 INF: FPGA: Recv ZDACR 28343
17-03-18 03:26:35.084 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.084 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:35.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:35.234 -07 000000618 INF: FPGA: Recv ZSGSRD 29494
17-03-18 03:26:35.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:35.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:35.244 -07 000000462 INF: FPGA: Recv ZSGSRD 29487
17-03-18 03:26:35.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:35.254 -07 000000501 INF: FPGA: Recv ZSGSRD 29491
17-03-18 03:26:35.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:35.264 -07 000000424 INF: FPGA: Recv ZSGSRD 29491
17-03-18 03:26:35.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:35.274 -07 000000461 INF: FPGA: Recv ZSGSRD 29486
17-03-18 03:26:35.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:35.284 -07 000000579 INF: FPGA: Recv ZSGSRD 29483
17-03-18 03:26:35.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:35.294 -07 000000430 INF: FPGA: Recv ZSGSRD 29487
17-03-18 03:26:35.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:35.304 -07 000000591 INF: FPGA: Recv ZSGSRD 29491
17-03-18 03:26:35.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:35.314 -07 000000444 INF: FPGA: Recv ZSGSRD 29480
17-03-18 03:26:35.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:35.324 -07 000000455 INF: FPGA: Recv ZSGSRD 29486
17-03-18 03:26:35.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.334 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:35.334 -07 000000561 INF: FPGA: Recv ZPIEZORD 24977
17-03-18 03:26:35.344 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:35.344 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.325 V. Piezo Error = -9.9 V.
17-03-18 03:26:35.344 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.7 um, Read 10 ADC samples: Avg = 29488 (-129.0 uncal um), Error = 0.8 uncal um, Median = 29487 (-129.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29480 (-128.9 uncal um), Max = 29494 (-129.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:26:35.344 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29488, posNoise = 6, negNoise = 8
17-03-18 03:26:35.344 -07 000000610 INF: Z Motor: After move to -0.129746, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:35.344 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:26:35.344 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:35.344 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:35.344 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:35.344 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:35.344 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:35.344 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:35.344 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:35.344 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:35.344 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:26:35.344 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:35.344 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:35.344 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:35.354 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:35.354 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:35.354 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:26:35.354 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:35.364 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:26:35.364 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:26:35.364 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:26:35.364 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:26:35.374 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28520 150\n [Camera]
17-03-18 03:26:35.574 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:35.974 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:35.974 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:35.974 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:35.974 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:35.974 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:35.974 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:35.974 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:26:35.974 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:35.984 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:35.984 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:26:36.164 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28520 790
17-03-18 03:26:36.324 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:36.354 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:26:36.354 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:26:36.354 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:36.354 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:36.354 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:26:36.354 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:26:36.354 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:36.364 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:36.364 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:26:36.364 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:26:36.514 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:36.514 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:36.514 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:36.514 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:36.514 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:26:36.524 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:36.524 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:36.524 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:36.524 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:36.524 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:26:36.574 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:36.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:36.704 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:26:36.704 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:36.704 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28520 150' command took 2 ms to send, 1325 ms to get response, and 1335 ms overall
17-03-18 03:26:36.704 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.129682
17-03-18 03:26:36.704 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.12968 mm
17-03-18 03:26:36.704 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:36.714 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:26:36.714 -07 000000512 INF: Y Motor: Moving to 70.7026 mm, started at 69.8628 mm, delta = 0.8398 mm
17-03-18 03:26:36.714 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 28329, sync = True, waitForSettling = False)
17-03-18 03:26:36.714 -07 000000576 INF: Z Motor: Moving to -0.129682 mm, started at -0.129761 mm, distance = 0.08 um
17-03-18 03:26:36.724 -07 000000576 INF: FPGA: Xmit ZDACW 28329\n [Z Motor]
17-03-18 03:26:36.724 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:26:36.734 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:36.734 -07 000000576 INF: FPGA: 'ZDACW 28329' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:26:36.734 -07 000000579 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:26:36.744 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-18 03:26:36.744 -07 000000512 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:36.744 -07 000000512 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:36.744 -07 000000512 INF: Y Motor: Moving 1344 steps-20
17-03-18 03:26:36.754 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:36.754 -07 000000461 INF: FPGA: Recv ZDACR 28329
17-03-18 03:26:36.764 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:36.764 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:26:36.764 -07 000000576 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet))
17-03-18 03:26:36.894 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:26:36.894 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:26:36.894 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:36.904 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:26:36.904 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:26:36.904 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:36.904 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:36.904 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:26:36.904 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:36.914 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:26:37.134 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:26:37.134 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:26:37.184 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:37.194 -07 000000579 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:26:37.194 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:26:37.194 -07 000000512 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:37.194 -07 000000512 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:26:37.194 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.110 mm/sec
17-03-18 03:26:37.724 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.000345,
17-03-18 03:26:38.144 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:38.144 -07 000000561 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:26:38.154 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:38.154 -07 000000512 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:38.184 -07 000000512 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:38.184 -07 000000512 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:26:38.184 -07 000000512 INF: Y Motor: Moved to 70.6880 after 1469 ms (table move)
17-03-18 03:26:38.184 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129682 mm (DAC = 28329)
17-03-18 03:26:38.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.184 -07 000000462 INF: FPGA: Recv ZSGSRD 29472
17-03-18 03:26:38.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:26:38.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.194 -07 000000579 INF: FPGA: Recv ZSGSRD 29475
17-03-18 03:26:38.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.204 -07 000000626 INF: FPGA: Recv ZSGSRD 29478
17-03-18 03:26:38.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.214 -07 000000444 INF: FPGA: Recv ZSGSRD 29468
17-03-18 03:26:38.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.224 -07 000000629 INF: FPGA: Recv ZSGSRD 29470
17-03-18 03:26:38.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.234 -07 000000430 INF: FPGA: Recv ZSGSRD 29476
17-03-18 03:26:38.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.244 -07 000000618 INF: FPGA: Recv ZSGSRD 29473
17-03-18 03:26:38.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.254 -07 000000591 INF: FPGA: Recv ZSGSRD 29471
17-03-18 03:26:38.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.264 -07 000000467 INF: FPGA: Recv ZSGSRD 29479
17-03-18 03:26:38.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.274 -07 000000576 INF: FPGA: Recv ZSGSRD 29474
17-03-18 03:26:38.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.284 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:38.284 -07 000000626 INF: FPGA: Recv ZPIEZORD 24995
17-03-18 03:26:38.294 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.294 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.323 V. Piezo Error = -9.8 V.
17-03-18 03:26:38.294 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.7 um, Read 10 ADC samples: Avg = 29474 (-128.9 uncal um), Error = 0.8 uncal um, Median = 29474 (-128.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29468 (-128.9 uncal um), Max = 29479 (-128.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:26:38.294 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29474, posNoise = 5, negNoise = 6
17-03-18 03:26:38.294 -07 000000610 INF: Z Motor: After move to -0.129682, error = 0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:38.294 -07 000000610 INF: Z Motor: Settle wait time = 1471 ms, measure time = 106 ms (allowed 150 ms), total time = 1577 ms
17-03-18 03:26:38.294 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:38.344 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1631 ms
17-03-18 03:26:38.344 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:38.344 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.129670580677397. ----------
17-03-18 03:26:38.344 -07 000000610 INF: Cycle	112	Tile	14	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:38.344 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28152, sync = True, waitForSettling = True)
17-03-18 03:26:38.344 -07 000000610 INF: Z Motor: Moving to -0.128872 mm, started at -0.129671 mm, distance = 0.80 um
17-03-18 03:26:38.344 -07 000000610 INF: FPGA: Xmit ZDACW 28152\n [Z Motor]
17-03-18 03:26:38.344 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:26:38.354 -07 000000610 INF: FPGA: 'ZDACW 28152' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:38.354 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:38.354 -07 000000455 INF: FPGA: Recv ZDACR 28152
17-03-18 03:26:38.364 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.364 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:38.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.514 -07 000000462 INF: FPGA: Recv ZSGSRD 29346
17-03-18 03:26:38.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:38.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.524 -07 000000591 INF: FPGA: Recv ZSGSRD 29354
17-03-18 03:26:38.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.534 -07 000000444 INF: FPGA: Recv ZSGSRD 29353
17-03-18 03:26:38.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.544 -07 000000579 INF: FPGA: Recv ZSGSRD 29355
17-03-18 03:26:38.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.554 -07 000000626 INF: FPGA: Recv ZSGSRD 29350
17-03-18 03:26:38.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.564 -07 000000462 INF: FPGA: Recv ZSGSRD 29347
17-03-18 03:26:38.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.574 -07 000000502 INF: FPGA: Recv ZSGSRD 29351
17-03-18 03:26:38.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.584 -07 000000618 INF: FPGA: Recv ZSGSRD 29348
17-03-18 03:26:38.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.594 -07 000000501 INF: FPGA: Recv ZSGSRD 29355
17-03-18 03:26:38.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:38.604 -07 000000629 INF: FPGA: Recv ZSGSRD 29350
17-03-18 03:26:38.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.614 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:38.614 -07 000000569 INF: FPGA: Recv ZPIEZORD 24819
17-03-18 03:26:38.624 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:38.624 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.296 V. Piezo Error = -9.9 V.
17-03-18 03:26:38.624 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.9 um, Read 10 ADC samples: Avg = 29351 (-128.1 uncal um), Error = 0.8 uncal um, Median = 29350 (-128.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29346 (-128.1 uncal um), Max = 29355 (-128.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:26:38.624 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29351, posNoise = 4, negNoise = 5
17-03-18 03:26:38.624 -07 000000610 INF: Z Motor: After move to -0.128872, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:38.624 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:26:38.624 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:38.624 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:38.624 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:38.624 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:38.624 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:38.624 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:38.624 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:38.624 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:38.624 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:38.624 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:38.624 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:38.624 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:38.624 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:26:38.624 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:38.634 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:38.634 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:38.644 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:26:38.644 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:26:38.644 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:26:38.644 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:26:38.654 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28329 150\n [Camera]
17-03-18 03:26:38.844 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:39.254 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:39.254 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:39.254 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:39.254 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:39.254 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:26:39.254 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:39.254 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:39.254 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:39.254 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:39.254 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:26:39.444 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28329 790
17-03-18 03:26:39.594 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:39.634 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:26:39.634 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:26:39.634 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:39.634 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:26:39.634 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:26:39.634 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:39.634 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:26:39.634 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:26:39.634 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:39.644 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:26:39.794 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:39.794 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:39.794 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:39.794 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:39.794 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:26:39.794 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:39.794 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:39.794 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:39.794 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:39.794 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 03:26:39.984 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:26:39.984 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:39.984 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28329 150' command took 2 ms to send, 1324 ms to get response, and 1334 ms overall
17-03-18 03:26:39.984 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:26:39.984 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.68798828125, Z-Position -0.128880402583961. ------
17-03-18 03:26:39.994 -07 000000576 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:26:39.994 -07 000000424 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.13553 mm
17-03-18 03:26:39.994 -07 000000424 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:39.994 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:26:39.994 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 29607, sync = True, waitForSettling = False)
17-03-18 03:26:39.994 -07 000000455 INF: Z Motor: Moving to -0.135532 mm, started at -0.128880 mm, distance = -6.65 um
17-03-18 03:26:39.994 -07 000000501 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm
17-03-18 03:26:39.994 -07 000000430 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:26:40.004 -07 000000576 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:26:40.004 -07 000000455 INF: FPGA: Xmit ZDACW 29607\n [Z Motor]
17-03-18 03:26:40.004 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:26:40.014 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:40.014 -07 000000455 INF: FPGA: 'ZDACW 29607' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:26:40.014 -07 000000444 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:26:40.024 -07 000000576 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:26:40.024 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-18 03:26:40.024 -07 000000501 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:40.024 -07 000000501 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:40.024 -07 000000501 INF: Y Motor: Moving 1351 steps-30
17-03-18 03:26:40.034 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:40.034 -07 000000512 INF: FPGA: Recv ZDACR 29607
17-03-18 03:26:40.044 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:40.044 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:26:40.044 -07 000000455 INF: Z Motor: MoveAbsStepped took 45 ms (did NOT wait for settling yet))
17-03-18 03:26:40.174 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:26:40.174 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:26:40.184 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:40.184 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:26:40.184 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:26:40.184 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:40.184 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:40.184 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:40.184 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:26:40.194 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:26:40.224 -07 000000590 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:26:40.224 -07 000000576 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall
17-03-18 03:26:40.424 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:26:40.424 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 400 ms overall
17-03-18 03:26:40.474 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:40.474 -07 000000467 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:26:40.484 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:40.484 -07 000000501 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:40.484 -07 000000501 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:26:40.484 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 401 ms, distance = 0.845 mm, average velocity = 2.106 mm/sec
17-03-18 03:26:41.434 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:41.434 -07 000000455 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:26:41.444 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:41.444 -07 000000501 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:41.474 -07 000000501 INF: Y Motor: After move to 71.532608, error = -0.014542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:41.474 -07 000000501 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:26:41.474 -07 000000501 INF: Y Motor: Moved to 71.5181 after 1475 ms (table move)
17-03-18 03:26:41.474 -07 000000424 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135532 mm (DAC = 29607)
17-03-18 03:26:41.474 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:41.474 -07 000000591 INF: FPGA: Recv ZSGSRD 30388
17-03-18 03:26:41.484 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:26:41.484 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:41.484 -07 000000502 INF: FPGA: Recv ZSGSRD 30390
17-03-18 03:26:41.494 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:41.494 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:41.494 -07 000000461 INF: FPGA: Recv ZSGSRD 30396
17-03-18 03:26:41.504 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:41.504 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:41.504 -07 000000467 INF: FPGA: Recv ZSGSRD 30388
17-03-18 03:26:41.514 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:41.514 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:41.514 -07 000000430 INF: FPGA: Recv ZSGSRD 30386
17-03-18 03:26:41.524 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:41.524 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:41.524 -07 000000591 INF: FPGA: Recv ZSGSRD 30390
17-03-18 03:26:41.534 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:41.534 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:41.534 -07 000000512 INF: FPGA: Recv ZSGSRD 30386
17-03-18 03:26:41.544 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:41.544 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:41.544 -07 000000590 INF: FPGA: Recv ZSGSRD 30387
17-03-18 03:26:41.554 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:41.554 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:41.554 -07 000000467 INF: FPGA: Recv ZSGSRD 30384
17-03-18 03:26:41.564 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:41.564 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:41.564 -07 000000430 INF: FPGA: Recv ZSGSRD 30393
17-03-18 03:26:41.574 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:41.574 -07 000000424 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:41.574 -07 000000591 INF: FPGA: Recv ZPIEZORD 26187
17-03-18 03:26:41.574 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:41.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:41.584 -07 000000424 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:41.584 -07 000000424 INF: Z Motor: Piezo is near 35.9 V (nominally 0 to 100 V), expect near 45.2 V, since DAC is at 4.518 V. Piezo Error = -9.2 V.
17-03-18 03:26:41.584 -07 000000424 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.5 um, Read 10 ADC samples: Avg = 30389 (-134.8 uncal um), Error = 0.8 uncal um, Median = 30388 (-134.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30384 (-134.7 uncal um), Max = 30396 (-134.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:26:41.584 -07 000000424 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30389, posNoise = 7, negNoise = 5
17-03-18 03:26:41.584 -07 000000424 INF: Z Motor: After move to -0.135532, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:41.584 -07 000000424 INF: Z Motor: Settle wait time = 1478 ms, measure time = 107 ms (allowed 150 ms), total time = 1585 ms
17-03-18 03:26:41.584 -07 000000424 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:41.634 -07 000000424 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1637 ms
17-03-18 03:26:41.634 -07 000000424 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:41.634 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:41.634 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:41.634 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:41.634 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:41.634 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:26:41.634 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:41.634 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:41.634 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:26:41.644 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:26:41.644 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:26:41.654 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 03:26:41.654 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:26:41.654 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:26:41.704 -07 000000579 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:26:41.994 -07 000000569 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:26:42.004 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:26:42.004 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:26:42.004 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) start.
17-03-18 03:26:42.034 -07 000000444 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:26:42.044 -07 000000606 INF: FPGA: Recv CAMSNAP
17-03-18 03:26:42.044 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall
17-03-18 03:26:42.114 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) end. Duration was 116 ms.
17-03-18 03:26:42.114 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:42.114 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:26:42.114 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-18 03:26:42.144 -07 000000430 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:26:42.144 -07 000000462 INF: Autofocus start
17-03-18 03:26:42.144 -07 000000462 INF: MeasureProfile start
17-03-18 03:26:42.144 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:26:42.154 -07 000000430 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:26:42.154 -07 000000430 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:26:42.154 -07 000000462 INF: MeasureProfile done
17-03-18 03:26:42.154 -07 000000462 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:26:42.154 -07 000000462 INF: Autofocus finished
17-03-18 03:26:42.354 -07 000000561 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:26:42.354 -07 000000430 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:26:42.354 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51806640625, Z-position -0.135548734787109. ----------
17-03-18 03:26:42.354 -07 000000610 INF: Cycle	112	Tile	15	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:42.364 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28114, sync = True, waitForSettling = True)
17-03-18 03:26:42.364 -07 000000610 INF: Z Motor: Moving to -0.128698 mm, started at -0.135549 mm, distance = 6.85 um
17-03-18 03:26:42.364 -07 000000610 INF: FPGA: Xmit ZDACW 28114\n [Z Motor]
17-03-18 03:26:42.364 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:26:42.374 -07 000000610 INF: FPGA: 'ZDACW 28114' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:42.374 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:42.374 -07 000000591 INF: FPGA: Recv ZDACR 28114
17-03-18 03:26:42.384 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:42.384 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:42.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:42.534 -07 000000424 INF: FPGA: Recv ZSGSRD 29329
17-03-18 03:26:42.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:42.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:42.544 -07 000000626 INF: FPGA: Recv ZSGSRD 29323
17-03-18 03:26:42.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:42.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:42.554 -07 000000467 INF: FPGA: Recv ZSGSRD 29327
17-03-18 03:26:42.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:42.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:42.564 -07 000000512 INF: FPGA: Recv ZSGSRD 29318
17-03-18 03:26:42.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:42.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:42.574 -07 000000561 INF: FPGA: Recv ZSGSRD 29327
17-03-18 03:26:42.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:42.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:42.584 -07 000000502 INF: FPGA: Recv ZSGSRD 29323
17-03-18 03:26:42.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:42.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:42.594 -07 000000629 INF: FPGA: Recv ZSGSRD 29317
17-03-18 03:26:42.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:42.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:42.604 -07 000000626 INF: FPGA: Recv ZSGSRD 29326
17-03-18 03:26:42.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:42.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:42.614 -07 000000424 INF: FPGA: Recv ZSGSRD 29324
17-03-18 03:26:42.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:42.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:42.624 -07 000000618 INF: FPGA: Recv ZSGSRD 29324
17-03-18 03:26:42.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:42.634 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:42.634 -07 000000579 INF: FPGA: Recv ZPIEZORD 24784
17-03-18 03:26:42.644 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:42.644 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.290 V. Piezo Error = -10.0 V.
17-03-18 03:26:42.644 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.7 um, Read 10 ADC samples: Avg = 29324 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29324 (-127.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29317 (-127.9 uncal um), Max = 29329 (-128.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:26:42.644 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29324, posNoise = 5, negNoise = 7
17-03-18 03:26:42.644 -07 000000610 INF: Z Motor: After move to -0.128698, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:42.644 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:26:42.644 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:42.644 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:42.644 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:42.644 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:42.644 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:42.644 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:42.644 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:42.644 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:42.644 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:42.644 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:42.644 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:42.644 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:42.654 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:26:42.654 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:42.654 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:42.654 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:42.654 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:26:42.664 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:26:42.664 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:26:42.664 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:26:42.664 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28291 150\n [Camera]
17-03-18 03:26:42.864 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:43.084 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.02213,
17-03-18 03:26:43.274 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:43.274 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:43.274 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:43.274 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:43.274 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 03:26:43.274 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:43.274 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:43.274 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:43.274 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:43.274 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 03:26:43.464 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28291 790
17-03-18 03:26:43.614 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:43.644 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:26:43.644 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:26:43.644 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:43.644 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:26:43.654 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:26:43.654 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:43.654 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:43.654 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:26:43.654 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:43.664 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:26:43.804 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:43.804 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:43.804 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:43.804 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:43.804 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-18 03:26:43.814 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:43.814 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:43.814 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:43.814 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:43.814 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-18 03:26:43.994 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:26:44.004 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:44.004 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28291 150' command took 2 ms to send, 1330 ms to get response, and 1335 ms overall
17-03-18 03:26:44.004 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.129039
17-03-18 03:26:44.004 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.12904 mm
17-03-18 03:26:44.004 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:44.004 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:26:44.004 -07 000000606 INF: Y Motor: Moving to 72.3626 mm, started at 71.5181 mm, delta = 0.8445 mm
17-03-18 03:26:44.004 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:44.004 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 28188, sync = True, waitForSettling = False)
17-03-18 03:26:44.004 -07 000000461 INF: Z Motor: Moving to -0.129036 mm, started at -0.128707 mm, distance = -0.33 um
17-03-18 03:26:44.004 -07 000000629 INF: FPGA: Recv YRDPOS 146470
17-03-18 03:26:44.014 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:44.014 -07 000000606 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:44.014 -07 000000461 INF: FPGA: Xmit ZDACW 28188\n [Z Motor]
17-03-18 03:26:44.014 -07 000000606 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:44.014 -07 000000606 INF: Y Motor: Moving 1350 steps-30
17-03-18 03:26:44.014 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:26:44.024 -07 000000461 INF: FPGA: 'ZDACW 28188' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:26:44.024 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:44.034 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:44.034 -07 000000424 INF: FPGA: Recv ZDACR 28188
17-03-18 03:26:44.044 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:26:44.044 -07 000000461 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-18 03:26:44.204 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 389 ms.
17-03-18 03:26:44.204 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:26:44.204 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:44.204 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 03:26:44.204 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:26:44.204 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:44.204 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:44.214 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:26:44.214 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:26:44.214 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:26:44.394 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:26:44.394 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 382 ms overall
17-03-18 03:26:44.444 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:44.444 -07 000000502 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:26:44.454 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:44.454 -07 000000606 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:44.454 -07 000000606 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:26:44.454 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 382 ms, distance = 0.845 mm, average velocity = 2.211 mm/sec
17-03-18 03:26:45.404 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:45.404 -07 000000561 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:26:45.414 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:45.414 -07 000000606 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:45.434 -07 000000606 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:45.434 -07 000000606 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:26:45.434 -07 000000606 INF: Y Motor: Moved to 72.3491 after 1434 ms (table move)
17-03-18 03:26:45.444 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129036 mm (DAC = 28188)
17-03-18 03:26:45.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.444 -07 000000467 INF: FPGA: Recv ZSGSRD 29375
17-03-18 03:26:45.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:45.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.454 -07 000000501 INF: FPGA: Recv ZSGSRD 29383
17-03-18 03:26:45.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.464 -07 000000606 INF: FPGA: Recv ZSGSRD 29381
17-03-18 03:26:45.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.474 -07 000000590 INF: FPGA: Recv ZSGSRD 29372
17-03-18 03:26:45.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.484 -07 000000430 INF: FPGA: Recv ZSGSRD 29377
17-03-18 03:26:45.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:45.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.494 -07 000000455 INF: FPGA: Recv ZSGSRD 29371
17-03-18 03:26:45.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.504 -07 000000512 INF: FPGA: Recv ZSGSRD 29376
17-03-18 03:26:45.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.514 -07 000000461 INF: FPGA: Recv ZSGSRD 29374
17-03-18 03:26:45.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.524 -07 000000618 INF: FPGA: Recv ZSGSRD 29375
17-03-18 03:26:45.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.534 -07 000000579 INF: FPGA: Recv ZSGSRD 29383
17-03-18 03:26:45.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.544 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:45.544 -07 000000591 INF: FPGA: Recv ZPIEZORD 24875
17-03-18 03:26:45.554 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.554 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.301 V. Piezo Error = -9.9 V.
17-03-18 03:26:45.554 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.0 um, Read 10 ADC samples: Avg = 29377 (-128.3 uncal um), Error = 0.8 uncal um, Median = 29376 (-128.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29371 (-128.2 uncal um), Max = 29383 (-128.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:26:45.554 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29377, posNoise = 6, negNoise = 6
17-03-18 03:26:45.554 -07 000000610 INF: Z Motor: After move to -0.129036, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:45.554 -07 000000610 INF: Z Motor: Settle wait time = 1436 ms, measure time = 109 ms (allowed 150 ms), total time = 1545 ms
17-03-18 03:26:45.554 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:45.604 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-18 03:26:45.604 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:45.604 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.129047432099647. ----------
17-03-18 03:26:45.604 -07 000000610 INF: Cycle	112	Tile	16	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:45.604 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28012, sync = True, waitForSettling = True)
17-03-18 03:26:45.604 -07 000000610 INF: Z Motor: Moving to -0.128231 mm, started at -0.129047 mm, distance = 0.82 um
17-03-18 03:26:45.604 -07 000000610 INF: FPGA: Xmit ZDACW 28012\n [Z Motor]
17-03-18 03:26:45.604 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:26:45.614 -07 000000610 INF: FPGA: 'ZDACW 28012' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:45.614 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:45.614 -07 000000455 INF: FPGA: Recv ZDACR 28012
17-03-18 03:26:45.624 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.624 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:45.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.774 -07 000000561 INF: FPGA: Recv ZSGSRD 29255
17-03-18 03:26:45.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:45.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.784 -07 000000424 INF: FPGA: Recv ZSGSRD 29248
17-03-18 03:26:45.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.794 -07 000000502 INF: FPGA: Recv ZSGSRD 29250
17-03-18 03:26:45.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.804 -07 000000444 INF: FPGA: Recv ZSGSRD 29251
17-03-18 03:26:45.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.814 -07 000000576 INF: FPGA: Recv ZSGSRD 29251
17-03-18 03:26:45.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.824 -07 000000455 INF: FPGA: Recv ZSGSRD 29251
17-03-18 03:26:45.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.834 -07 000000462 INF: FPGA: Recv ZSGSRD 29249
17-03-18 03:26:45.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.844 -07 000000461 INF: FPGA: Recv ZSGSRD 29256
17-03-18 03:26:45.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.854 -07 000000467 INF: FPGA: Recv ZSGSRD 29252
17-03-18 03:26:45.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:45.864 -07 000000424 INF: FPGA: Recv ZSGSRD 29255
17-03-18 03:26:45.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.874 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:45.874 -07 000000626 INF: FPGA: Recv ZPIEZORD 24712
17-03-18 03:26:45.884 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:45.884 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.274 V. Piezo Error = -10.0 V.
17-03-18 03:26:45.884 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.2 um, Read 10 ADC samples: Avg = 29252 (-127.5 uncal um), Error = 0.8 uncal um, Median = 29251 (-127.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29248 (-127.4 uncal um), Max = 29256 (-127.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:26:45.884 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29252, posNoise = 4, negNoise = 4
17-03-18 03:26:45.884 -07 000000610 INF: Z Motor: After move to -0.128231, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:45.884 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:26:45.884 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:45.884 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:45.884 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:45.884 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:45.884 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:45.884 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:45.884 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:45.884 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:45.884 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:45.884 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:45.884 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:45.884 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:45.884 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:26:45.884 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:45.894 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:45.894 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:45.904 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 03:26:45.904 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:26:45.904 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:26:45.904 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:26:45.904 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28188 150\n [Camera]
17-03-18 03:26:46.104 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:46.514 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:46.514 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:46.514 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:46.514 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:46.514 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start.
17-03-18 03:26:46.514 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:46.514 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:46.514 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:46.514 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:46.514 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-18 03:26:46.574 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:46.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:46.704 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28188 790
17-03-18 03:26:46.854 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:46.894 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:26:46.894 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:26:46.894 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:46.894 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:26:46.894 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:26:46.894 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:46.894 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:46.894 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:26:46.894 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:46.904 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:26:47.054 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:47.054 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:47.054 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:47.054 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:47.054 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start.
17-03-18 03:26:47.054 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:47.054 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:47.054 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:47.054 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:47.054 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start.
17-03-18 03:26:47.244 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:26:47.244 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:47.244 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28188 150' command took 2 ms to send, 1331 ms to get response, and 1334 ms overall
17-03-18 03:26:47.244 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.128794
17-03-18 03:26:47.244 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.12879 mm
17-03-18 03:26:47.244 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:47.244 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:26:47.244 -07 000000430 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm
17-03-18 03:26:47.244 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:47.244 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 28135, sync = True, waitForSettling = False)
17-03-18 03:26:47.244 -07 000000591 INF: Z Motor: Moving to -0.128794 mm, started at -0.128244 mm, distance = -0.55 um
17-03-18 03:26:47.244 -07 000000462 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:26:47.254 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:26:47.254 -07 000000430 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:47.254 -07 000000430 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:47.254 -07 000000430 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:26:47.254 -07 000000591 INF: FPGA: Xmit ZDACW 28135\n [Z Motor]
17-03-18 03:26:47.254 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:26:47.264 -07 000000591 INF: FPGA: 'ZDACW 28135' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:26:47.264 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:47.264 -07 000000618 INF: FPGA: Recv ZDACR 28135
17-03-18 03:26:47.274 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:47.274 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:47.274 -07 000000591 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 03:26:47.434 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:26:47.434 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:26:47.434 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:47.444 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 03:26:47.444 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:26:47.444 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:47.444 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:47.444 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:26:47.444 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:47.454 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:26:47.644 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:26:47.644 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:26:47.694 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:47.704 -07 000000569 INF: FPGA: Recv YRDPOS 149863
17-03-18 03:26:47.704 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:26:47.704 -07 000000430 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:47.704 -07 000000430 INF: Y Motor: Position error before settling (table move) = -35 encoder counts (-0.017 mm)
17-03-18 03:26:47.704 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.843 mm, average velocity = 2.119 mm/sec
17-03-18 03:26:48.444 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 4.024884,
17-03-18 03:26:48.654 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:48.654 -07 000000626 INF: FPGA: Recv YRDPOS 149864
17-03-18 03:26:48.664 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:48.664 -07 000000430 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:48.684 -07 000000430 INF: Y Motor: After move to 73.192604, error = -0.016823, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:48.684 -07 000000430 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:26:48.684 -07 000000430 INF: Y Motor: Moved to 73.1758 after 1443 ms (table move)
17-03-18 03:26:48.694 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128794 mm (DAC = 28135)
17-03-18 03:26:48.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:48.694 -07 000000629 INF: FPGA: Recv ZSGSRD 29338
17-03-18 03:26:48.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:26:48.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:48.704 -07 000000579 INF: FPGA: Recv ZSGSRD 29337
17-03-18 03:26:48.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:48.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:48.714 -07 000000502 INF: FPGA: Recv ZSGSRD 29343
17-03-18 03:26:48.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:48.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:48.724 -07 000000618 INF: FPGA: Recv ZSGSRD 29337
17-03-18 03:26:48.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:48.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:48.734 -07 000000591 INF: FPGA: Recv ZSGSRD 29343
17-03-18 03:26:48.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:48.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:48.744 -07 000000462 INF: FPGA: Recv ZSGSRD 29339
17-03-18 03:26:48.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:48.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:48.754 -07 000000576 INF: FPGA: Recv ZSGSRD 29335
17-03-18 03:26:48.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:48.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:48.764 -07 000000455 INF: FPGA: Recv ZSGSRD 29337
17-03-18 03:26:48.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:48.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:48.774 -07 000000467 INF: FPGA: Recv ZSGSRD 29332
17-03-18 03:26:48.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:48.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:48.784 -07 000000591 INF: FPGA: Recv ZSGSRD 29341
17-03-18 03:26:48.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:48.794 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:48.794 -07 000000424 INF: FPGA: Recv ZPIEZORD 24860
17-03-18 03:26:48.804 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:48.804 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.293 V. Piezo Error = -9.8 V.
17-03-18 03:26:48.804 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29338 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29338 (-128.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29332 (-128.0 uncal um), Max = 29343 (-128.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:26:48.804 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29338, posNoise = 5, negNoise = 6
17-03-18 03:26:48.804 -07 000000610 INF: Z Motor: After move to -0.128794, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:48.804 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 106 ms (allowed 150 ms), total time = 1553 ms
17-03-18 03:26:48.804 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:48.854 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms
17-03-18 03:26:48.854 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:48.854 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17578125, Z-position -0.128796887826118. ----------
17-03-18 03:26:48.854 -07 000000610 INF: Cycle	112	Tile	17	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:48.854 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27958, sync = True, waitForSettling = True)
17-03-18 03:26:48.854 -07 000000610 INF: Z Motor: Moving to -0.127984 mm, started at -0.128797 mm, distance = 0.81 um
17-03-18 03:26:48.854 -07 000000610 INF: FPGA: Xmit ZDACW 27958\n [Z Motor]
17-03-18 03:26:48.854 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:26:48.864 -07 000000610 INF: FPGA: 'ZDACW 27958' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:48.864 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:48.864 -07 000000629 INF: FPGA: Recv ZDACR 27958
17-03-18 03:26:48.874 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:48.874 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:49.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:49.024 -07 000000579 INF: FPGA: Recv ZSGSRD 29207
17-03-18 03:26:49.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:49.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:49.034 -07 000000626 INF: FPGA: Recv ZSGSRD 29218
17-03-18 03:26:49.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:49.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:49.044 -07 000000512 INF: FPGA: Recv ZSGSRD 29219
17-03-18 03:26:49.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:49.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:49.054 -07 000000561 INF: FPGA: Recv ZSGSRD 29212
17-03-18 03:26:49.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:49.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:49.064 -07 000000502 INF: FPGA: Recv ZSGSRD 29213
17-03-18 03:26:49.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:49.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:49.074 -07 000000467 INF: FPGA: Recv ZSGSRD 29214
17-03-18 03:26:49.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:49.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:49.084 -07 000000618 INF: FPGA: Recv ZSGSRD 29213
17-03-18 03:26:49.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:49.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:49.094 -07 000000591 INF: FPGA: Recv ZSGSRD 29213
17-03-18 03:26:49.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:49.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:49.104 -07 000000579 INF: FPGA: Recv ZSGSRD 29208
17-03-18 03:26:49.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:49.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:49.114 -07 000000502 INF: FPGA: Recv ZSGSRD 29214
17-03-18 03:26:49.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:49.124 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:49.124 -07 000000629 INF: FPGA: Recv ZPIEZORD 24675
17-03-18 03:26:49.134 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:49.134 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.266 V. Piezo Error = -9.9 V.
17-03-18 03:26:49.134 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.0 um, Read 10 ADC samples: Avg = 29213 (-127.2 uncal um), Error = 0.8 uncal um, Median = 29213 (-127.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29207 (-127.2 uncal um), Max = 29219 (-127.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:26:49.134 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29213, posNoise = 6, negNoise = 6
17-03-18 03:26:49.134 -07 000000610 INF: Z Motor: After move to -0.127984, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:49.134 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:26:49.134 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:49.134 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:49.134 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:49.134 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:49.134 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:49.134 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:49.134 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:49.134 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:49.134 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:49.134 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:49.134 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:49.134 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:49.134 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:26:49.134 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:49.144 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:26:49.144 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:49.154 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 03:26:49.154 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:26:49.154 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:26:49.154 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:26:49.154 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28135 150\n [Camera]
17-03-18 03:26:49.354 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:49.764 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:49.764 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:49.764 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:49.764 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:49.764 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-18 03:26:49.764 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:49.764 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:49.764 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:49.764 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:49.764 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-18 03:26:49.954 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28135 790
17-03-18 03:26:50.104 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:50.154 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 393 ms.
17-03-18 03:26:50.154 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:26:50.154 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:50.164 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 393 ms.
17-03-18 03:26:50.164 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:26:50.164 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:50.164 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:50.164 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:26:50.164 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:50.174 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-18 03:26:50.304 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:50.304 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:50.304 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:50.304 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:50.304 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) start.
17-03-18 03:26:50.304 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:50.304 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:50.304 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:50.304 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:50.304 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-18 03:26:50.494 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:26:50.494 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:50.494 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28135 150' command took 2 ms to send, 1323 ms to get response, and 1334 ms overall
17-03-18 03:26:50.494 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128339
17-03-18 03:26:50.494 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12834 mm
17-03-18 03:26:50.494 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:50.494 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:26:50.494 -07 000000629 INF: Y Motor: Moving to 74.0226 mm, started at 73.1758 mm, delta = 0.8468 mm
17-03-18 03:26:50.494 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:50.494 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 28036, sync = True, waitForSettling = False)
17-03-18 03:26:50.494 -07 000000462 INF: Z Motor: Moving to -0.128341 mm, started at -0.127994 mm, distance = -0.35 um
17-03-18 03:26:50.504 -07 000000462 INF: FPGA: Xmit ZDACW 28036\n [Z Motor]
17-03-18 03:26:50.504 -07 000000501 INF: FPGA: Recv YRDPOS 149864
17-03-18 03:26:50.504 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:26:50.504 -07 000000629 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:50.504 -07 000000629 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:50.504 -07 000000629 INF: Y Motor: Moving 1355 steps-35
17-03-18 03:26:50.504 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:26:50.514 -07 000000462 INF: FPGA: 'ZDACW 28036' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:50.514 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:50.524 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:50.524 -07 000000606 INF: FPGA: Recv ZDACR 28036
17-03-18 03:26:50.534 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:26:50.534 -07 000000462 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-18 03:26:50.684 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:26:50.684 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:26:50.684 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:50.684 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:26:50.684 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:26:50.684 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:50.694 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:26:50.694 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:26:50.694 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:26:50.694 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:26:50.884 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:26:50.884 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 03:26:50.924 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:50.934 -07 000000467 INF: FPGA: Recv YRDPOS 151567
17-03-18 03:26:50.934 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:26:50.934 -07 000000629 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:50.934 -07 000000629 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:26:50.934 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.847 mm, average velocity = 2.194 mm/sec
17-03-18 03:26:51.574 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:51.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:51.884 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:51.884 -07 000000618 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:26:51.894 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:51.894 -07 000000629 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:51.914 -07 000000629 INF: Y Motor: After move to 74.022606, error = -0.014793, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:51.914 -07 000000629 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:26:51.914 -07 000000629 INF: Y Motor: Moved to 74.0078 after 1415 ms (table move)
17-03-18 03:26:51.914 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128341 mm (DAC = 28036)
17-03-18 03:26:51.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:51.924 -07 000000576 INF: FPGA: Recv ZSGSRD 29273
17-03-18 03:26:51.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:51.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:51.924 -07 000000455 INF: FPGA: Recv ZSGSRD 29262
17-03-18 03:26:51.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:51.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:51.934 -07 000000591 INF: FPGA: Recv ZSGSRD 29266
17-03-18 03:26:51.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:51.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:51.944 -07 000000618 INF: FPGA: Recv ZSGSRD 29270
17-03-18 03:26:51.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:51.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:51.954 -07 000000629 INF: FPGA: Recv ZSGSRD 29274
17-03-18 03:26:51.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:51.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:51.964 -07 000000444 INF: FPGA: Recv ZSGSRD 29268
17-03-18 03:26:51.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:51.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:51.974 -07 000000502 INF: FPGA: Recv ZSGSRD 29265
17-03-18 03:26:51.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:51.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:51.984 -07 000000626 INF: FPGA: Recv ZSGSRD 29269
17-03-18 03:26:51.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:51.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:51.994 -07 000000424 INF: FPGA: Recv ZSGSRD 29257
17-03-18 03:26:52.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:52.004 -07 000000579 INF: FPGA: Recv ZSGSRD 29271
17-03-18 03:26:52.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.014 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:52.014 -07 000000444 INF: FPGA: Recv ZPIEZORD 24817
17-03-18 03:26:52.024 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.024 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.278 V. Piezo Error = -9.8 V.
17-03-18 03:26:52.024 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.3 um, Read 10 ADC samples: Avg = 29268 (-127.6 uncal um), Error = 0.8 uncal um, Median = 29268 (-127.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29257 (-127.5 uncal um), Max = 29274 (-127.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 03:26:52.024 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29268, posNoise = 6, negNoise = 11
17-03-18 03:26:52.024 -07 000000610 INF: Z Motor: After move to -0.128341, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:52.024 -07 000000610 INF: Z Motor: Settle wait time = 1417 ms, measure time = 106 ms (allowed 150 ms), total time = 1523 ms
17-03-18 03:26:52.024 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:52.074 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1574 ms
17-03-18 03:26:52.074 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:52.074 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0078125, Z-position -0.128347192976195. ----------
17-03-18 03:26:52.074 -07 000000610 INF: Cycle	112	Tile	18	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:52.074 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27859, sync = True, waitForSettling = True)
17-03-18 03:26:52.074 -07 000000610 INF: Z Motor: Moving to -0.127530 mm, started at -0.128347 mm, distance = 0.82 um
17-03-18 03:26:52.074 -07 000000610 INF: FPGA: Xmit ZDACW 27859\n [Z Motor]
17-03-18 03:26:52.074 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:26:52.084 -07 000000610 INF: FPGA: 'ZDACW 27859' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:52.084 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:52.084 -07 000000462 INF: FPGA: Recv ZDACR 27859
17-03-18 03:26:52.094 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.094 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:52.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:52.244 -07 000000444 INF: FPGA: Recv ZSGSRD 29140
17-03-18 03:26:52.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:52.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:52.254 -07 000000501 INF: FPGA: Recv ZSGSRD 29144
17-03-18 03:26:52.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:52.264 -07 000000591 INF: FPGA: Recv ZSGSRD 29147
17-03-18 03:26:52.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:52.274 -07 000000424 INF: FPGA: Recv ZSGSRD 29146
17-03-18 03:26:52.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:52.284 -07 000000629 INF: FPGA: Recv ZSGSRD 29146
17-03-18 03:26:52.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:52.294 -07 000000606 INF: FPGA: Recv ZSGSRD 29136
17-03-18 03:26:52.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:52.304 -07 000000455 INF: FPGA: Recv ZSGSRD 29138
17-03-18 03:26:52.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:52.314 -07 000000467 INF: FPGA: Recv ZSGSRD 29141
17-03-18 03:26:52.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:52.324 -07 000000561 INF: FPGA: Recv ZSGSRD 29139
17-03-18 03:26:52.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:52.334 -07 000000462 INF: FPGA: Recv ZSGSRD 29143
17-03-18 03:26:52.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:26:52.344 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:52.344 -07 000000561 INF: FPGA: Recv ZPIEZORD 24620
17-03-18 03:26:52.354 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:52.354 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.251 V. Piezo Error = -9.9 V.
17-03-18 03:26:52.354 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29142 (-126.8 uncal um), Error = 0.8 uncal um, Median = 29142 (-126.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29136 (-126.7 uncal um), Max = 29147 (-126.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:26:52.354 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29142, posNoise = 5, negNoise = 6
17-03-18 03:26:52.354 -07 000000610 INF: Z Motor: After move to -0.127530, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:52.354 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:26:52.354 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:52.354 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:52.354 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:52.354 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:52.354 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:52.354 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:52.354 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:52.354 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:52.354 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:52.354 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:52.354 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:52.354 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:52.364 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:26:52.364 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:52.364 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:26:52.364 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:52.374 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:26:52.374 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:26:52.374 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:26:52.374 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:26:52.374 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 28036 150\n [Camera]
17-03-18 03:26:52.574 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:52.984 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:52.984 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:52.984 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:52.984 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:52.984 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) start.
17-03-18 03:26:52.984 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:52.984 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:52.984 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:53.134 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:53.134 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) start.
17-03-18 03:26:53.174 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28036 790
17-03-18 03:26:53.324 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:26:53.394 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) end. Duration was 406 ms.
17-03-18 03:26:53.394 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 03:26:53.394 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:53.394 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:53.394 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 412 ms.
17-03-18 03:26:53.504 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:26:53.504 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:26:53.504 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:53.514 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:53.514 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 531 ms.
17-03-18 03:26:53.524 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1137
17-03-18 03:26:53.524 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1137
17-03-18 03:26:53.524 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:53.524 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1137
17-03-18 03:26:53.524 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1137
17-03-18 03:26:53.524 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:53.534 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:53.534 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:26:53.534 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:53.534 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:26:53.714 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1327
17-03-18 03:26:53.714 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:53.714 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 28036 150' command took 2 ms to send, 1322 ms to get response, and 1334 ms overall
17-03-18 03:26:53.714 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:26:53.714 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.0078125, Z-Position -0.127537742246333. ------
17-03-18 03:26:53.714 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:26:53.714 -07 000000424 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.13354 mm
17-03-18 03:26:53.714 -07 000000424 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:26:53.724 -07 000000590 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:26:53.724 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:26:53.724 -07 000000455 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:26:53.724 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:26:53.724 -07 000000502 INF: Y Motor: Moving to 74.8526 mm, started at 74.0078 mm, delta = 0.8448 mm
17-03-18 03:26:53.724 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 29171, sync = True, waitForSettling = False)
17-03-18 03:26:53.724 -07 000000430 INF: Z Motor: Moving to -0.133536 mm, started at -0.127538 mm, distance = -6.00 um
17-03-18 03:26:53.734 -07 000000430 INF: FPGA: Xmit ZDACW 29171\n [Z Motor]
17-03-18 03:26:53.734 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:26:53.744 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:53.744 -07 000000430 INF: FPGA: 'ZDACW 29171' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:26:53.744 -07 000000626 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:26:53.754 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:26:53.754 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:53.754 -07 000000502 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:53.754 -07 000000502 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:26:53.754 -07 000000502 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:26:53.754 -07 000000629 INF: FPGA: Recv ZDACR 29171
17-03-18 03:26:53.764 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:26:53.764 -07 000000430 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 03:26:53.764 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:26:53.804 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.999021,
17-03-18 03:26:53.904 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 03:26:53.904 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:26:53.904 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:53.904 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:26:53.904 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:26:53.904 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:53.914 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:53.914 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:26:53.914 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:26:53.924 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:26:53.924 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:26:53.924 -07 000000455 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 196 ms to get response, and 204 ms overall
17-03-18 03:26:54.134 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 03:26:54.134 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:26:54.164 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:54.174 -07 000000591 INF: FPGA: Recv YRDPOS 153254
17-03-18 03:26:54.174 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:26:54.174 -07 000000502 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:54.174 -07 000000502 INF: Y Motor: Position error before settling (table move) = -44 encoder counts (-0.021 mm)
17-03-18 03:26:54.174 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.845 mm, average velocity = 2.177 mm/sec
17-03-18 03:26:55.124 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:26:55.124 -07 000000569 INF: FPGA: Recv YRDPOS 153255
17-03-18 03:26:55.134 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:55.134 -07 000000502 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:26:55.144 -07 000000502 INF: Y Motor: After move to 74.852608, error = -0.021065, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:26:55.144 -07 000000502 INF: Y Motor: Position error after settling (table move) = -43 encoder counts (-0.021 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:26:55.144 -07 000000502 INF: Y Motor: Moved to 74.8315 after 1424 ms (table move)
17-03-18 03:26:55.154 -07 000000424 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133536 mm (DAC = 29171)
17-03-18 03:26:55.154 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:55.154 -07 000000444 INF: FPGA: Recv ZSGSRD 30088
17-03-18 03:26:55.164 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:26:55.164 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:55.164 -07 000000576 INF: FPGA: Recv ZSGSRD 30073
17-03-18 03:26:55.174 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:55.174 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:55.174 -07 000000467 INF: FPGA: Recv ZSGSRD 30065
17-03-18 03:26:55.184 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:55.184 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:55.184 -07 000000462 INF: FPGA: Recv ZSGSRD 30075
17-03-18 03:26:55.194 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:55.194 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:55.194 -07 000000512 INF: FPGA: Recv ZSGSRD 30078
17-03-18 03:26:55.204 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:55.204 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:55.204 -07 000000569 INF: FPGA: Recv ZSGSRD 30074
17-03-18 03:26:55.214 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:55.214 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:55.214 -07 000000591 INF: FPGA: Recv ZSGSRD 30085
17-03-18 03:26:55.224 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:55.224 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:55.224 -07 000000430 INF: FPGA: Recv ZSGSRD 30074
17-03-18 03:26:55.234 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:55.234 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:55.234 -07 000000462 INF: FPGA: Recv ZSGSRD 30078
17-03-18 03:26:55.244 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:55.244 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:55.244 -07 000000629 INF: FPGA: Recv ZSGSRD 30071
17-03-18 03:26:55.254 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:55.254 -07 000000424 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:55.254 -07 000000579 INF: FPGA: Recv ZPIEZORD 25875
17-03-18 03:26:55.264 -07 000000424 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:55.264 -07 000000424 INF: Z Motor: Piezo is near 35.3 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.451 V. Piezo Error = -9.2 V.
17-03-18 03:26:55.264 -07 000000424 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.5 um, Read 10 ADC samples: Avg = 30076 (-132.8 uncal um), Error = 0.8 uncal um, Median = 30074 (-132.7 uncal um), StdDev = 7 (0.0 uncal um), Range = 23 (0.1 uncal um), Min = 30065 (-132.7 uncal um), Max = 30088 (-132.8 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 03:26:55.264 -07 000000424 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30076, posNoise = 12, negNoise = 11
17-03-18 03:26:55.264 -07 000000424 INF: Z Motor: After move to -0.133536, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:55.264 -07 000000424 INF: Z Motor: Settle wait time = 1428 ms, measure time = 107 ms (allowed 150 ms), total time = 1535 ms
17-03-18 03:26:55.264 -07 000000424 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:26:55.314 -07 000000424 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-18 03:26:55.314 -07 000000424 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:26:55.314 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:55.314 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:55.314 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:55.314 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:55.314 -07 000000629 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:26:55.314 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:55.314 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:26:55.314 -07 000000629 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:26:55.324 -07 000000629 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:26:55.324 -07 000000629 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:26:55.334 -07 000000629 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms.
17-03-18 03:26:55.334 -07 000000629 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 13 ms.
17-03-18 03:26:55.334 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:26:55.374 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:26:55.674 -07 000000424 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:26:55.674 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:26:55.674 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:26:55.684 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1077874736, 0x0, 559484976) start.
17-03-18 03:26:55.724 -07 000000569 INF: FPGA: Recv @CAMSNAP 383
17-03-18 03:26:55.724 -07 000000430 INF: FPGA: Recv CAMSNAP
17-03-18 03:26:55.724 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 388 ms overall
17-03-18 03:26:55.804 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1077874736, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:26:55.804 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:55.804 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:26:55.804 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:26:55.824 -07 000000462 INF: Autofocus start
17-03-18 03:26:55.824 -07 000000462 INF: MeasureProfile start
17-03-18 03:26:55.824 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:26:55.824 -07 000000629 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:26:55.834 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:26:55.834 -07 000000618 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:26:55.834 -07 000000462 INF: MeasureProfile done
17-03-18 03:26:55.834 -07 000000462 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:26:55.834 -07 000000462 INF: Autofocus finished
17-03-18 03:26:56.034 -07 000000606 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:26:56.034 -07 000000618 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:26:56.034 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83154296875, Z-position -0.133537956386738. ----------
17-03-18 03:26:56.034 -07 000000610 INF: Cycle	112	Tile	19	Exposure Settings		A	405	G	195	T	195	C	405
17-03-18 03:26:56.044 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27679, sync = True, waitForSettling = True)
17-03-18 03:26:56.044 -07 000000610 INF: Z Motor: Moving to -0.126706 mm, started at -0.133538 mm, distance = 6.83 um
17-03-18 03:26:56.044 -07 000000610 INF: FPGA: Xmit ZDACW 27679\n [Z Motor]
17-03-18 03:26:56.044 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:26:56.054 -07 000000610 INF: FPGA: 'ZDACW 27679' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:26:56.054 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:26:56.054 -07 000000590 INF: FPGA: Recv ZDACR 27679
17-03-18 03:26:56.064 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:56.064 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:26:56.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:56.214 -07 000000455 INF: FPGA: Recv ZSGSRD 29013
17-03-18 03:26:56.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:26:56.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:56.224 -07 000000424 INF: FPGA: Recv ZSGSRD 29015
17-03-18 03:26:56.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:56.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:56.234 -07 000000467 INF: FPGA: Recv ZSGSRD 29012
17-03-18 03:26:56.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:56.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:56.244 -07 000000579 INF: FPGA: Recv ZSGSRD 29010
17-03-18 03:26:56.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:56.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:56.254 -07 000000629 INF: FPGA: Recv ZSGSRD 29010
17-03-18 03:26:56.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:56.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:56.264 -07 000000455 INF: FPGA: Recv ZSGSRD 29014
17-03-18 03:26:56.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:56.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:56.274 -07 000000561 INF: FPGA: Recv ZSGSRD 29015
17-03-18 03:26:56.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:56.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:56.284 -07 000000569 INF: FPGA: Recv ZSGSRD 29013
17-03-18 03:26:56.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:56.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:56.294 -07 000000579 INF: FPGA: Recv ZSGSRD 29011
17-03-18 03:26:56.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:56.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:26:56.304 -07 000000576 INF: FPGA: Recv ZSGSRD 29012
17-03-18 03:26:56.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:56.314 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:26:56.314 -07 000000461 INF: FPGA: Recv ZPIEZORD 24537
17-03-18 03:26:56.324 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:26:56.324 -07 000000610 INF: Z Motor: Piezo is near 32.4 V (nominally 0 to 100 V), expect near 42.2 V, since DAC is at 4.224 V. Piezo Error = -9.8 V.
17-03-18 03:26:56.324 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.7 um, Read 10 ADC samples: Avg = 29012 (-125.9 uncal um), Error = 0.8 uncal um, Median = 29012 (-125.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 29010 (-125.9 uncal um), Max = 29015 (-126.0 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-18 03:26:56.324 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29012, posNoise = 3, negNoise = 2
17-03-18 03:26:56.324 -07 000000610 INF: Z Motor: After move to -0.126706, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:26:56.324 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:26:56.324 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:26:56.324 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:26:56.324 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:26:56.334 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:26:56.334 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:26:56.334 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:26:56.334 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:26:56.344 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:26:56.344 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:26:56.344 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:26:56.344 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:26:56.344 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:26:56.344 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:26:56.344 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:26:56.344 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:26:56.344 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:26:56.354 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:26:56.354 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 26 ms.
17-03-18 03:26:56.354 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:26:56.354 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 26 ms.
17-03-18 03:26:56.364 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 405 405 195 195 27855 150\n [Camera]
17-03-18 03:26:56.564 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:26:56.574 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:26:56.574 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 111. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1630, R2=1698, Total=3328. Warn if over 250 bubbles per interval.
17-03-18 03:26:56.964 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:26:56.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:26:56.964 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:56.964 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:26:56.964 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:26:56.974 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:57.094 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:57.094 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1096956120, 0x0, 391868352) start.
17-03-18 03:26:57.094 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:57.094 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) start.
17-03-18 03:26:57.154 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27855 790
17-03-18 03:26:57.304 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:26:57.464 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1096956120, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:26:57.464 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:26:57.464 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:57.464 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 592591928, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:26:57.464 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:26:57.464 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:57.474 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:57.474 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 505 ms.
17-03-18 03:26:57.474 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:57.484 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 511 ms.
17-03-18 03:26:57.504 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1135
17-03-18 03:26:57.504 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1135
17-03-18 03:26:57.504 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:26:57.504 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1135
17-03-18 03:26:57.504 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1135
17-03-18 03:26:57.504 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:26:57.504 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:26:57.504 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:26:57.514 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:26:57.514 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:26:57.694 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1328
17-03-18 03:26:57.694 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:26:57.694 -07 000000610 INF: FPGA: 'CAMDBLSNAP 405 405 195 195 27855 150' command took 2 ms to send, 1326 ms to get response, and 1334 ms overall
17-03-18 03:26:57.884 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:26:57.884 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:26:57.884 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:57.884 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:26:57.884 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:26:57.884 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:26:57.894 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:26:57.894 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 03:26:57.894 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:26:57.894 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:26:57.904 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:26:57.934 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:26:57.934 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:26:57.974 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms.
17-03-18 03:26:57.994 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-18 03:26:57.994 -07 000000610 INF: Imaging Cycle 112: ScanTilesCommand Cycle 112 time end. Duration was 142145 ms.
17-03-18 03:26:57.994 -07 000000610 INF: =================== Cycle #112 ===================
17-03-18 03:26:57.994 -07 000000610 INF: ===================  ===================
17-03-18 03:26:57.994 -07 000000462 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:26:57.994 -07 000000629 INF: FPGA: Recv EXLED1ADCR 29
17-03-18 03:26:58.004 -07 000000462 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:26:58.004 -07 000000462 INF: GreenLED: Using Green data: Photodiode ADC 29 --> 0.0 mW (old method), or 2.2 mW (new method). Difference = 2.2 mW
17-03-18 03:26:58.004 -07 000000462 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 112, FrontChillerTemperature: 3.999021, FrontChillerHeatSinkTemperature: 0.375945, AmbientTemperature: 18.71785, FlowCellCompartmentTemperature: 21.99981, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.57412, GreenLEDSensorTemperature: 25.36053, PhotodiodePowerAdcGreen: 29, PhotodiodePowerMwGreen: 2.200606
17-03-18 03:26:58.114 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.