17-03-18 03:31:36.434 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:31:36.444 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-18 03:31:36.444 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8320 mm, delta = 0.5485 mm
17-03-18 03:31:36.444 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:31:36.444 -07 000000618 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:31:36.454 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:31:36.454 -07 000000610 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:31:36.454 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-18 03:31:36.454 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-18 03:31:36.454 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-18 03:31:36.564 -07 000000561 INF: FPGA: Recv YMVTO 154378 878
17-03-18 03:31:36.564 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 109 ms to get response, and 118 ms overall
17-03-18 03:31:36.564 -07 000000610 INF: Y Motor: Position error before settling = -1 encoder counts (0.000 mm)
17-03-18 03:31:36.564 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.549 mm) should take 877 steps, but required 878 steps (0.549 mm). Slippage = 0.001 mm (0.00%).
17-03-18 03:31:36.564 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 118 ms, distance = 0.549 mm, average velocity = 4.649 mm/sec
17-03-18 03:31:36.584 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:31:36.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1642, R2=1712, Total=3354. Warn if over 250 bubbles per interval.
17-03-18 03:31:39.564 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:31:39.564 -07 000000606 INF: FPGA: Recv YRDPOS 154387
17-03-18 03:31:39.574 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:31:39.574 -07 000000610 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:31:39.594 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.003697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:31:39.594 -07 000000610 INF: Y Motor: Position error after settling = 8 encoder counts (0.004 mm), Delta during settling = 9 counts (0.004 mm)
17-03-18 03:31:39.594 -07 000000610 INF: Y Motor: Moved to 75.3843 after 3156 ms
17-03-18 03:31:39.604 -07 000000610 INF: =================== Cycle #114, Flow Cell Temp 60° ===================
17-03-18 03:31:39.604 -07 000000610 INF: =================== Cycle #114, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-18 03:31:39.614 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-18 03:31:39.614 -07 000000561 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:31:39.624 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:31:39.624 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:31:39.624 -07 000000561 INF: FPGA: Recv TEC2EN 
17-03-18 03:31:39.634 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:31:39.634 -07 000000610 INF: =================== Cycle #114, Flow Cell Temp 60° ===================
17-03-18 03:31:39.634 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:31:39.634 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:31:39.634 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:31:39.664 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:31:39.664 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-18 03:31:39.664 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:31:39.924 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.024884,
17-03-18 03:31:39.964 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:31:39.984 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:31:39.984 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:31:40.034 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:31:40.054 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:31:40.054 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:31:40.154 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:31:40.154 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:31:40.154 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:31:40.184 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:31:40.184 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:31:40.184 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:31:40.314 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:31:40.354 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:31:41.584 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:31:41.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1642, R2=1712, Total=3354. Warn if over 250 bubbles per interval.
17-03-18 03:31:43.484 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:31:43.514 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:31:43.934 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:31:43.964 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:31:44.384 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:31:44.414 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:31:44.414 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:31:44.414 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:31:44.544 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:31:44.574 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:31:44.574 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:31:44.704 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:31:44.734 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:31:44.734 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:31:44.734 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:31:44.864 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:31:44.894 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:31:45.294 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.037119,
17-03-18 03:31:45.324 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:31:45.354 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:31:45.354 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:31:45.354 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:31:46.574 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:31:46.574 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-18 03:31:46.574 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:31:46.584 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 3 R1 3
17-03-18 03:31:46.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=3, R2=3, Total=6. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1645, R2=1715, Total=3360. Warn if over 250 bubbles per interval.
17-03-18 03:31:46.594 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:31:46.594 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-18 03:31:46.594 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-18 03:31:46.734 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:31:46.754 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-18 03:31:46.754 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-18 03:31:46.804 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:31:46.824 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:31:46.824 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:31:46.924 -07 000000610 INF: =================== Cycle #114, Pumping Reagent CMS (4) ===================
17-03-18 03:31:46.924 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:31:46.924 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:31:46.954 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:31:46.954 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:31:46.954 -07 000000610 INF: =================== Cycle #114, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-18 03:31:47.084 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:31:47.124 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:31:48.564 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:31:48.594 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:31:49.014 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:31:49.044 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:31:49.044 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:31:49.044 -07 000000610 INF: =================== Cycle #114, Pumping Reagent CMS (4) ===================
17-03-18 03:31:49.174 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:31:49.204 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:31:49.204 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:31:49.334 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:31:49.364 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:31:49.364 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:31:49.364 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:31:49.494 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:31:49.524 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:31:49.954 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:31:49.984 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:31:49.984 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:31:49.984 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:31:50.654 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.039839,
17-03-18 03:31:51.204 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:31:51.204 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:31:51.204 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:31:51.224 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:31:51.224 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-18 03:31:51.224 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-18 03:31:51.374 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:31:51.394 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-18 03:31:51.394 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-18 03:31:51.444 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:31:51.464 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:31:51.464 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:31:51.564 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:31:51.564 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:31:51.564 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:31:51.584 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:31:51.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1645, R2=1715, Total=3360. Warn if over 250 bubbles per interval.
17-03-18 03:31:51.594 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:31:51.594 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:31:51.594 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:31:51.724 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:31:51.764 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:31:52.634 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:31:52.664 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:31:52.664 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:31:52.664 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:31:52.794 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:31:52.824 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:31:52.824 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:31:52.954 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:31:52.984 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:31:52.984 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:31:52.984 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:31:53.114 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:31:53.144 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:31:53.574 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:31:53.604 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:31:53.604 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:31:53.604 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:31:53.604 -07 000000618 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:31:53.604 -07 000000430 INF: WaitCommand(10000) start
17-03-18 03:31:53.604 -07 000000618 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:31:54.824 -07 000000618 INF: AsyncDelayTimer waited 1215ms
17-03-18 03:31:54.824 -07 000000618 INF: LanePump: Xmit /1?\r
17-03-18 03:31:54.854 -07 000000618 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:31:54.854 -07 000000618 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:31:54.984 -07 000000618 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:31:55.024 -07 000000618 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:31:56.034 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.019446,
17-03-18 03:31:56.554 -07 000000618 INF: LanePump: Xmit /1Q\r
17-03-18 03:31:56.584 -07 000000618 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:31:56.584 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:31:56.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1645, R2=1715, Total=3360. Warn if over 250 bubbles per interval.
17-03-18 03:31:57.004 -07 000000618 INF: LanePump: Xmit /1Q\r
17-03-18 03:31:57.034 -07 000000618 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:31:57.034 -07 000000618 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:31:57.034 -07 000000618 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:31:57.034 -07 000000618 INF: ===================  ===================
17-03-18 03:32:01.394 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.993549,
17-03-18 03:32:01.584 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:32:01.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1645, R2=1715, Total=3360. Warn if over 250 bubbles per interval.
17-03-18 03:32:03.614 -07 000000430 INF: WaitCommand(10000) end
17-03-18 03:32:03.614 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:32:03.614 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-18 03:32:03.614 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:03.654 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:32:03.654 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:32:03.654 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:32:03.784 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-18 03:32:03.824 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:32:06.584 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:32:06.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1645, R2=1715, Total=3360. Warn if over 250 bubbles per interval.
17-03-18 03:32:06.764 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.974486,
17-03-18 03:32:09.954 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:09.984 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:32:10.404 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:10.434 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:32:10.854 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:10.884 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:32:11.304 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:11.334 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:32:11.584 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-18 03:32:11.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:32:11.754 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:11.784 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:11.784 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-18 03:32:11.784 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:32:11.914 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:11.944 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:32:11.944 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:32:12.074 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:12.104 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:32:12.104 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:32:12.104 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:32:12.134 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.960826,
17-03-18 03:32:12.234 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:32:12.264 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:12.694 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:12.724 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:12.724 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:32:12.724 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:32:13.944 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-18 03:32:13.944 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-18 03:32:13.944 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:32:13.964 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:32:13.964 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-18 03:32:13.964 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-18 03:32:14.174 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:32:14.194 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-18 03:32:14.194 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-18 03:32:14.244 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:32:14.264 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:32:14.264 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:32:14.364 -07 000000610 INF: =================== Cycle #114, Pumping Reagent IMT (1) ===================
17-03-18 03:32:14.364 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:32:14.364 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:14.394 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:32:14.394 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:32:14.394 -07 000000610 INF: =================== Cycle #114, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-18 03:32:14.524 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:32:14.564 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:32:16.004 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:16.034 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:32:16.454 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:16.484 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:16.484 -07 000000610 INF: LanePump: Waited 1920 ms for pump motion to complete
17-03-18 03:32:16.484 -07 000000610 INF: =================== Cycle #114, Pumping Reagent IMT (1) ===================
17-03-18 03:32:16.584 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:32:16.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:32:16.614 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:16.644 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:32:16.644 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:32:16.774 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:16.804 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:32:16.804 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:32:16.804 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:32:16.934 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:32:16.964 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:17.394 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:17.424 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:17.424 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:32:17.424 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:32:17.514 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.98264,
17-03-18 03:32:18.644 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-18 03:32:18.644 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:32:18.644 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:32:18.664 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:32:18.664 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-18 03:32:18.664 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:32:18.894 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:32:18.914 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-18 03:32:18.914 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-18 03:32:18.964 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:32:18.984 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:32:18.984 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:32:19.084 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:32:19.084 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:32:19.084 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:19.114 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:32:19.114 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:32:19.114 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:32:19.244 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:32:19.284 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:32:20.154 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:20.184 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:20.184 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:32:20.184 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:32:20.314 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:20.344 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:32:20.344 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:32:20.474 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:20.504 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:32:20.504 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:32:20.504 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:32:20.634 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:32:20.664 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:21.094 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:21.124 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:21.124 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:32:21.124 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:32:21.124 -07 000000610 INF: =================== Cycle #114, Flow Cell Temp 65° ===================
17-03-18 03:32:21.124 -07 000000610 INF: =================== Cycle #114, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-18 03:32:21.124 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-18 03:32:21.134 -07 000000467 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:32:21.134 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:32:21.134 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:32:21.134 -07 000000467 INF: FPGA: Recv TEC2EN 
17-03-18 03:32:21.144 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:32:21.144 -07 000000610 INF: =================== Cycle #114, Flow Cell Temp 65° ===================
17-03-18 03:32:21.144 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:32:21.144 -07 000000610 INF: WaitCommand(30000) start
17-03-18 03:32:21.584 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:32:21.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:32:22.874 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.983999,
17-03-18 03:32:26.584 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:32:26.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:32:28.254 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.020806,
17-03-18 03:32:31.584 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:32:31.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:32:33.614 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.016692,
17-03-18 03:32:36.584 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:32:36.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:32:38.984 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.001704,
17-03-18 03:32:41.584 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:32:41.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:32:44.354 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.001704,
17-03-18 03:32:46.584 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:32:46.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:32:49.724 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.990831,
17-03-18 03:32:51.154 -07 000000610 INF: WaitCommand(30000) end
17-03-18 03:32:51.154 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:32:51.154 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-18 03:32:51.254 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:51.284 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:32:51.284 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:32:51.284 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:32:51.414 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-18 03:32:51.454 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:32:51.584 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:32:51.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:32:51.994 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:52.024 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:52.024 -07 000000610 INF: LanePump: Waited 570 ms for pump motion to complete
17-03-18 03:32:52.024 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:32:52.154 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:52.184 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:32:52.184 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:32:52.314 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:32:52.344 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:32:52.344 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:32:52.344 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:32:52.474 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:32:52.504 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:52.934 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:52.964 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:52.964 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:32:52.964 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:32:52.964 -07 000000512 INF: WaitCommand(30000) start
17-03-18 03:32:52.964 -07 000000430 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:32:52.964 -07 000000430 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:32:54.184 -07 000000430 INF: AsyncDelayTimer waited 1216ms
17-03-18 03:32:54.184 -07 000000430 INF: LanePump: Xmit /1?\r
17-03-18 03:32:54.214 -07 000000430 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:32:54.214 -07 000000430 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:32:54.344 -07 000000430 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:32:54.384 -07 000000430 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:32:55.094 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.993549,
17-03-18 03:32:56.584 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:32:56.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:32:56.724 -07 000000430 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:56.754 -07 000000430 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:32:57.174 -07 000000430 INF: LanePump: Xmit /1Q\r
17-03-18 03:32:57.204 -07 000000430 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:32:57.204 -07 000000430 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-18 03:32:57.204 -07 000000430 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:32:57.204 -07 000000430 INF: ===================  ===================
17-03-18 03:33:00.464 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.983999,
17-03-18 03:33:01.584 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:01.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:05.834 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.007176,
17-03-18 03:33:06.584 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:06.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:11.204 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.003063,
17-03-18 03:33:11.584 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:11.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:16.574 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.996267,
17-03-18 03:33:16.584 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:16.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:21.584 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:21.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:21.954 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.024884,
17-03-18 03:33:22.974 -07 000000512 INF: WaitCommand(30000) end
17-03-18 03:33:22.974 -07 000000610 INF: =================== Cycle #114, Flow Cell Temp 22° ===================
17-03-18 03:33:22.974 -07 000000610 INF: =================== Cycle #114, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-18 03:33:22.974 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-18 03:33:22.974 -07 000000606 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:33:22.984 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:33:22.984 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:33:22.984 -07 000000590 INF: FPGA: Recv TEC2EN 
17-03-18 03:33:22.994 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:22.994 -07 000000610 INF: =================== Cycle #114, Flow Cell Temp 22° ===================
17-03-18 03:33:22.994 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:33:22.994 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:33:22.994 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:33:22.994 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:33:23.024 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:33:23.024 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:33:23.024 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:33:23.154 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:33:23.194 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:33:26.324 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:33:26.354 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:33:26.584 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:26.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:26.774 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:33:26.804 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:33:27.224 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:33:27.254 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:33:27.254 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:33:27.254 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:33:27.314 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.008536,
17-03-18 03:33:27.384 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:33:27.414 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:33:27.414 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:33:27.544 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:33:27.574 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:33:27.574 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:33:27.574 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:33:27.704 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:33:27.734 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:33:28.164 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:33:28.194 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:33:28.194 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:33:28.194 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:33:29.414 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:33:29.414 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-18 03:33:29.414 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:33:29.434 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:33:29.434 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-18 03:33:29.434 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-18 03:33:29.584 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:33:29.604 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:33:29.604 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:33:29.654 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:33:29.674 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:33:29.674 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:33:29.774 -07 000000610 INF: =================== Cycle #114, Pumping Reagent USM (2) ===================
17-03-18 03:33:29.774 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:33:29.774 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:33:29.804 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:33:29.804 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:33:29.804 -07 000000610 INF: =================== Cycle #114, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-18 03:33:29.934 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:33:29.974 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:33:31.414 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:33:31.444 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:33:31.584 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:31.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:31.864 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:33:31.894 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:33:31.894 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:33:31.894 -07 000000610 INF: =================== Cycle #114, Pumping Reagent USM (2) ===================
17-03-18 03:33:32.024 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:33:32.054 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:33:32.054 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:33:32.184 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:33:32.214 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:33:32.214 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:33:32.214 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:33:32.344 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:33:32.374 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:33:32.684 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.019446,
17-03-18 03:33:32.804 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:33:32.834 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:33:32.834 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:33:32.834 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:33:34.054 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:33:34.054 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:33:34.054 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:33:34.074 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:33:34.074 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-18 03:33:34.074 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:33:34.224 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:33:34.244 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:33:34.244 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:33:34.294 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:33:34.314 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:33:34.314 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:33:34.414 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:33:34.414 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:33:34.414 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:33:34.444 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:33:34.444 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:33:34.444 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:33:34.574 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:33:34.614 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:33:35.484 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:33:35.514 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:33:35.514 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:33:35.514 -07 000000610 INF: =================== Cycle #114, Pumping Reagent PR2 (3) ===================
17-03-18 03:33:35.644 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:33:35.674 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:33:35.674 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:33:35.804 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:33:35.834 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:33:35.834 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:33:35.834 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:33:35.964 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:33:35.994 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:33:36.424 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:33:36.454 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:33:36.454 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:33:36.454 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:33:36.454 -07 000000430 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:33:36.454 -07 000000502 INF: WaitCommand(10000) start
17-03-18 03:33:36.454 -07 000000430 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:33:36.584 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:36.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:37.674 -07 000000430 INF: AsyncDelayTimer waited 1214ms
17-03-18 03:33:37.674 -07 000000430 INF: LanePump: Xmit /1?\r
17-03-18 03:33:37.704 -07 000000430 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:33:37.704 -07 000000430 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:33:37.834 -07 000000430 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:33:37.874 -07 000000430 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:33:38.054 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.003063,
17-03-18 03:33:39.404 -07 000000430 INF: LanePump: Xmit /1Q\r
17-03-18 03:33:39.434 -07 000000430 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:33:39.854 -07 000000430 INF: LanePump: Xmit /1Q\r
17-03-18 03:33:39.884 -07 000000430 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:33:39.884 -07 000000430 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:33:39.884 -07 000000430 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:33:39.884 -07 000000430 INF: ===================  ===================
17-03-18 03:33:41.584 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:41.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:43.424 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.03576,
17-03-18 03:33:46.464 -07 000000502 INF: WaitCommand(10000) end
17-03-18 03:33:46.464 -07 000000610 INF: =================== Cycle #114, Imaging ===================
17-03-18 03:33:46.464 -07 000000610 INF: Imaging Cycle 114: ScanTilesCommand Cycle 114 time start.
17-03-18 03:33:46.464 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-18 03:33:46.464 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:33:46.494 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:33:46.494 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-18 03:33:46.494 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-18 03:33:46.584 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:46.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:46.794 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:33:46.814 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:33:46.814 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:33:46.864 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:33:46.884 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:33:46.884 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:33:46.884 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:33:46.884 -07 000000606 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-18 03:33:46.884 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:33:46.884 -07 000000606 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-18 03:33:46.884 -07 000000590 INF: FPGA: Recv EXLED1ON 
17-03-18 03:33:46.894 -07 000000606 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:33:46.894 -07 000000606 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-18 03:33:46.894 -07 000000592 INF: FPGA: Recv EXLED1ADCR 23161
17-03-18 03:33:46.904 -07 000000606 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:46.904 -07 000000606 INF: RedLED: Using Red data: Photodiode ADC 23161 --> 7.4 mW (old method), or 205.3 mW (new method). Difference = 197.8 mW
17-03-18 03:33:46.904 -07 000000606 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-18 03:33:46.904 -07 000000579 INF: FPGA: Recv EXLED1OFF 
17-03-18 03:33:46.914 -07 000000606 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:46.914 -07 000000606 INF: RedLED: LED was on for 20 ms
17-03-18 03:33:46.914 -07 000000606 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 25 ms.
17-03-18 03:33:46.914 -07 000000606 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-18 03:33:46.914 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:33:46.914 -07 000000606 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-18 03:33:46.914 -07 000000569 INF: FPGA: Recv EXLED2ON 
17-03-18 03:33:46.924 -07 000000606 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:33:46.924 -07 000000606 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:33:46.924 -07 000000502 INF: FPGA: Recv EXLED1ADCR 2098
17-03-18 03:33:46.934 -07 000000606 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:46.934 -07 000000606 INF: GreenLED: Using Green data: Photodiode ADC 2098 --> 0.9 mW (old method), or 182.3 mW (new method). Difference = 181.4 mW
17-03-18 03:33:46.934 -07 000000606 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-18 03:33:46.934 -07 000000592 INF: FPGA: Recv EXLED2OFF 
17-03-18 03:33:46.944 -07 000000606 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:46.944 -07 000000606 INF: GreenLED: LED was on for 19 ms
17-03-18 03:33:46.944 -07 000000606 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-18 03:33:46.944 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:33:46.944 -07 000000590 INF: FPGA: Recv EMCUR 
17-03-18 03:33:46.954 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:33:46.954 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-18 03:33:47.454 -07 000000512 INF: FPGA: Recv EMOUT
17-03-18 03:33:47.454 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 496 ms to get response, and 505 ms overall
17-03-18 03:33:47.454 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-18 03:33:47.454 -07 000000590 INF: FPGA: Recv EMCUR 
17-03-18 03:33:47.464 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:33:47.464 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:33:47.464 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.38427734375, Z-Position -0.126574110425069. ------
17-03-18 03:33:47.464 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:33:47.464 -07 000000430 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17870 mm
17-03-18 03:33:47.464 -07 000000430 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:33:47.464 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:33:47.474 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:33:47.474 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 39037, sync = True, waitForSettling = False)
17-03-18 03:33:47.474 -07 000000438 INF: Z Motor: Moving to -0.178700 mm, started at -0.126574 mm, distance = -52.13 um
17-03-18 03:33:47.474 -07 000000512 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:33:47.474 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:33:47.474 -07 000000569 INF: Y Motor: Moving to 59.9126 mm, started at 75.3843 mm, delta = -15.4717 mm
17-03-18 03:33:47.484 -07 000000438 INF: FPGA: Xmit ZDACW 39037\n [Z Motor]
17-03-18 03:33:47.484 -07 000000592 INF: FPGA: Recv ZDACW
17-03-18 03:33:47.494 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:33:47.494 -07 000000438 INF: FPGA: 'ZDACW 39037' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:33:47.494 -07 000000579 INF: FPGA: Recv YRDPOS 154387
17-03-18 03:33:47.504 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:33:47.504 -07 000000569 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:33:47.504 -07 000000569 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-18 03:33:47.504 -07 000000569 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:33:47.504 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:33:47.504 -07 000000579 INF: FPGA: Recv ZDACR 39037
17-03-18 03:33:47.514 -07 000000438 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:33:47.514 -07 000000438 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 03:33:47.514 -07 000000569 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:33:47.674 -07 000000502 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:33:47.674 -07 000000512 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-18 03:33:48.794 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.02213,
17-03-18 03:33:49.194 -07 000000502 INF: FPGA: Recv YMVTO 122703 24783
17-03-18 03:33:49.194 -07 000000569 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1696 ms overall
17-03-18 03:33:49.194 -07 000000569 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:33:49.194 -07 000000569 INF: Y Motor: To move from 75.384 to 59.913 (-15.472 mm) should take 24755 steps, but required 24783 steps (15.489 mm). Slippage = 0.018 mm (0.00%).
17-03-18 03:33:49.194 -07 000000569 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1696 ms, distance = 15.472 mm, average velocity = 9.122 mm/sec
17-03-18 03:33:51.584 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:51.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:52.044 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:33:52.044 -07 000000606 INF: FPGA: Recv YRDPOS 122696
17-03-18 03:33:52.054 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:33:52.054 -07 000000569 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:33:52.074 -07 000000569 INF: Y Motor: After move to 59.912609, error = -0.002453, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:33:52.074 -07 000000569 INF: Y Motor: Position error after settling = -5 encoder counts (-0.002 mm), Delta during settling = -7 counts (-0.003 mm)
17-03-18 03:33:52.074 -07 000000569 INF: Y Motor: Moved to 59.9102 after 4608 ms
17-03-18 03:33:52.084 -07 000000430 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178700 mm (DAC = 39037)
17-03-18 03:33:52.084 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:52.084 -07 000000592 INF: FPGA: Recv ZSGSRD 37109
17-03-18 03:33:52.094 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:33:52.094 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:52.094 -07 000000569 INF: FPGA: Recv ZSGSRD 37103
17-03-18 03:33:52.104 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:52.104 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:52.104 -07 000000579 INF: FPGA: Recv ZSGSRD 37106
17-03-18 03:33:52.114 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:52.114 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:52.114 -07 000000569 INF: FPGA: Recv ZSGSRD 37101
17-03-18 03:33:52.124 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:52.124 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:52.124 -07 000000438 INF: FPGA: Recv ZSGSRD 37103
17-03-18 03:33:52.134 -07 000000430 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:52.134 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:52.134 -07 000000579 INF: FPGA: Recv ZSGSRD 37110
17-03-18 03:33:52.144 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:52.144 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:52.144 -07 000000569 INF: FPGA: Recv ZSGSRD 37105
17-03-18 03:33:52.154 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:52.154 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:52.154 -07 000000592 INF: FPGA: Recv ZSGSRD 37104
17-03-18 03:33:52.164 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:52.164 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:52.164 -07 000000502 INF: FPGA: Recv ZSGSRD 37112
17-03-18 03:33:52.174 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:52.174 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:52.174 -07 000000579 INF: FPGA: Recv ZSGSRD 37114
17-03-18 03:33:52.184 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:52.184 -07 000000430 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:33:52.184 -07 000000590 INF: FPGA: Recv ZPIEZORD 33349
17-03-18 03:33:52.194 -07 000000430 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:52.194 -07 000000430 INF: Z Motor: Piezo is near 51.2 V (nominally 0 to 100 V), expect near 59.6 V, since DAC is at 5.957 V. Piezo Error = -8.3 V.
17-03-18 03:33:52.194 -07 000000430 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.7 um, Read 10 ADC samples: Avg = 37107 (-177.8 uncal um), Error = 0.9 uncal um, Median = 37106 (-177.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 37101 (-177.8 uncal um), Max = 37114 (-177.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:33:52.194 -07 000000430 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37107, posNoise = 7, negNoise = 6
17-03-18 03:33:52.194 -07 000000430 INF: Z Motor: After move to -0.178700, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:33:52.194 -07 000000430 INF: Z Motor: Settle wait time = 4612 ms, measure time = 108 ms (allowed 150 ms), total time = 4720 ms
17-03-18 03:33:52.194 -07 000000430 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:33:52.244 -07 000000430 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4772 ms
17-03-18 03:33:52.244 -07 000000430 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:33:52.244 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:33:52.244 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:33:52.244 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:33:52.244 -07 000000438 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:33:52.244 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:33:52.244 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:33:52.244 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:33:52.244 -07 000000438 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:33:52.274 -07 000000438 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 03:33:52.274 -07 000000438 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:33:52.274 -07 000000438 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:33:52.274 -07 000000438 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:33:52.284 -07 000000438 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:33:52.284 -07 000000438 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms.
17-03-18 03:33:52.294 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:33:52.334 -07 000000606 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:33:52.634 -07 000000592 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:33:52.634 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:33:52.634 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:33:52.634 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) start.
17-03-18 03:33:52.674 -07 000000579 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:33:52.674 -07 000000606 INF: FPGA: Recv CAMSNAP
17-03-18 03:33:52.674 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 375 ms to get response, and 385 ms overall
17-03-18 03:33:52.764 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 03:33:52.764 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:33:52.764 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:33:52.764 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 127 ms.
17-03-18 03:33:52.774 -07 000000502 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:33:52.774 -07 000000592 INF: Image SNR check: start
17-03-18 03:33:52.774 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:33:52.784 -07 000000502 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:33:52.784 -07 000000502 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:33:52.784 -07 000000592 INF: Image SNR check: pass  [peak (Max-Min)=153.09]
17-03-18 03:33:52.784 -07 000000592 INF: Autofocus start
17-03-18 03:33:52.784 -07 000000592 INF: MeasureProfile start
17-03-18 03:33:52.794 -07 000000592 INF: MeasureProfile done
17-03-18 03:33:52.794 -07 000000592 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:33:52.794 -07 000000592 INF: Autofocus finished
17-03-18 03:33:52.984 -07 000000579 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:33:52.984 -07 000000502 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:33:52.984 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91015625, Z-position -0.178706591955459. ----------
17-03-18 03:33:52.984 -07 000000610 INF: Cycle	114	Tile	1	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:33:52.994 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37552, sync = True, waitForSettling = True)
17-03-18 03:33:52.994 -07 000000610 INF: Z Motor: Moving to -0.171902 mm, started at -0.178707 mm, distance = 6.80 um
17-03-18 03:33:52.994 -07 000000610 INF: FPGA: Xmit ZDACW 37552\n [Z Motor]
17-03-18 03:33:52.994 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 03:33:53.004 -07 000000610 INF: FPGA: 'ZDACW 37552' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:33:53.004 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:33:53.004 -07 000000438 INF: FPGA: Recv ZDACR 37552
17-03-18 03:33:53.014 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:53.014 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:33:53.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:53.164 -07 000000512 INF: FPGA: Recv ZSGSRD 36046
17-03-18 03:33:53.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:33:53.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:53.174 -07 000000512 INF: FPGA: Recv ZSGSRD 36051
17-03-18 03:33:53.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:53.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:53.184 -07 000000512 INF: FPGA: Recv ZSGSRD 36052
17-03-18 03:33:53.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:53.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:53.194 -07 000000512 INF: FPGA: Recv ZSGSRD 36053
17-03-18 03:33:53.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:53.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:53.204 -07 000000569 INF: FPGA: Recv ZSGSRD 36046
17-03-18 03:33:53.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:53.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:53.214 -07 000000512 INF: FPGA: Recv ZSGSRD 36052
17-03-18 03:33:53.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:53.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:53.224 -07 000000512 INF: FPGA: Recv ZSGSRD 36049
17-03-18 03:33:53.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:53.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:53.234 -07 000000569 INF: FPGA: Recv ZSGSRD 36052
17-03-18 03:33:53.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:53.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:53.244 -07 000000512 INF: FPGA: Recv ZSGSRD 36048
17-03-18 03:33:53.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:53.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:53.254 -07 000000512 INF: FPGA: Recv ZSGSRD 36047
17-03-18 03:33:53.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:53.264 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:33:53.264 -07 000000569 INF: FPGA: Recv ZPIEZORD 31922
17-03-18 03:33:53.274 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:53.274 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.730 V. Piezo Error = -9.1 V.
17-03-18 03:33:53.274 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36050 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36050 (-171.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 36046 (-171.0 uncal um), Max = 36053 (-171.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:33:53.274 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36050, posNoise = 3, negNoise = 4
17-03-18 03:33:53.274 -07 000000610 INF: Z Motor: After move to -0.171902, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:33:53.274 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:33:53.274 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:33:53.274 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:33:53.274 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:33:53.274 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:33:53.274 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:33:53.274 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:33:53.274 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:33:53.274 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:33:53.274 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:33:53.274 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:33:53.274 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:33:53.274 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:33:53.284 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:33:53.284 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:33:53.294 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:33:53.294 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:33:53.304 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 23 ms.
17-03-18 03:33:53.304 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:33:53.304 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:33:53.304 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:33:53.324 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:33:53.324 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 46 ms.
17-03-18 03:33:53.324 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37728 150\n [Camera]
17-03-18 03:33:53.524 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:33:53.924 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:33:53.924 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:33:53.934 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:33:53.934 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:33:53.934 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:33:53.934 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:33:53.934 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:33:53.934 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:33:53.944 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:33:53.944 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-18 03:33:54.124 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37728 792
17-03-18 03:33:54.164 -07 000000611 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.997626,
17-03-18 03:33:54.274 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:33:54.334 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:33:54.334 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:33:54.334 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:33:54.334 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:33:54.334 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:33:54.334 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 393 ms.
17-03-18 03:33:54.334 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:33:54.334 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:33:54.334 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:33:54.344 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-18 03:33:54.464 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:33:54.464 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:33:54.464 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:33:54.474 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:33:54.474 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:33:54.474 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:33:54.474 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:33:54.474 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:33:54.474 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:33:54.474 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:33:54.654 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:33:54.664 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:33:54.664 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37728 150' command took 2 ms to send, 1330 ms to get response, and 1337 ms overall
17-03-18 03:33:54.664 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.172220
17-03-18 03:33:54.664 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17222 mm
17-03-18 03:33:54.664 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:33:54.664 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:33:54.664 -07 000000611 INF: Y Motor: Moving to 60.7426 mm, started at 59.9102 mm, delta = 0.8325 mm
17-03-18 03:33:54.664 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 37622, sync = True, waitForSettling = False)
17-03-18 03:33:54.664 -07 000000579 INF: Z Motor: Moving to -0.172222 mm, started at -0.171916 mm, distance = -0.31 um
17-03-18 03:33:54.664 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:33:54.664 -07 000000569 INF: FPGA: Recv YRDPOS 122696
17-03-18 03:33:54.674 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:33:54.674 -07 000000611 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:33:54.674 -07 000000611 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:33:54.674 -07 000000611 INF: Y Motor: Moving 1332 steps2
17-03-18 03:33:54.674 -07 000000579 INF: FPGA: Xmit ZDACW 37622\n [Z Motor]
17-03-18 03:33:54.674 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:33:54.684 -07 000000579 INF: FPGA: 'ZDACW 37622' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:33:54.684 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:33:54.694 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:33:54.694 -07 000000590 INF: FPGA: Recv ZDACR 37622
17-03-18 03:33:54.704 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:33:54.704 -07 000000579 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-18 03:33:54.874 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 403 ms.
17-03-18 03:33:54.874 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:33:54.874 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:33:54.874 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 403 ms.
17-03-18 03:33:54.874 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:33:54.874 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:33:54.884 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:33:54.884 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 412 ms.
17-03-18 03:33:54.884 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:33:54.894 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 418 ms.
17-03-18 03:33:55.064 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:33:55.064 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 3 ms to send, 375 ms to get response, and 394 ms overall
17-03-18 03:33:55.104 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:33:55.104 -07 000000592 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:33:55.114 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:33:55.114 -07 000000611 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:33:55.114 -07 000000611 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 03:33:55.114 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.832 mm, average velocity = 2.113 mm/sec
17-03-18 03:33:56.064 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:33:56.064 -07 000000438 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:33:56.074 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:33:56.074 -07 000000611 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:33:56.104 -07 000000611 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:33:56.104 -07 000000611 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:33:56.104 -07 000000611 INF: Y Motor: Moved to 60.7324 after 1436 ms (table move)
17-03-18 03:33:56.104 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172222 mm (DAC = 37622)
17-03-18 03:33:56.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.104 -07 000000611 INF: FPGA: Recv ZSGSRD 36092
17-03-18 03:33:56.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:33:56.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.114 -07 000000611 INF: FPGA: Recv ZSGSRD 36096
17-03-18 03:33:56.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.124 -07 000000611 INF: FPGA: Recv ZSGSRD 36095
17-03-18 03:33:56.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.134 -07 000000611 INF: FPGA: Recv ZSGSRD 36100
17-03-18 03:33:56.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.144 -07 000000611 INF: FPGA: Recv ZSGSRD 36103
17-03-18 03:33:56.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.154 -07 000000611 INF: FPGA: Recv ZSGSRD 36104
17-03-18 03:33:56.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.164 -07 000000611 INF: FPGA: Recv ZSGSRD 36094
17-03-18 03:33:56.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.174 -07 000000512 INF: FPGA: Recv ZSGSRD 36098
17-03-18 03:33:56.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.184 -07 000000430 INF: FPGA: Recv ZSGSRD 36094
17-03-18 03:33:56.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.194 -07 000000579 INF: FPGA: Recv ZSGSRD 36096
17-03-18 03:33:56.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.204 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:33:56.204 -07 000000579 INF: FPGA: Recv ZPIEZORD 32064
17-03-18 03:33:56.214 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.214 -07 000000610 INF: Z Motor: Piezo is near 48.5 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.741 V. Piezo Error = -8.9 V.
17-03-18 03:33:56.214 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36097 (-171.3 uncal um), Error = 0.9 uncal um, Median = 36096 (-171.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36092 (-171.3 uncal um), Max = 36104 (-171.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:33:56.214 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36097, posNoise = 7, negNoise = 5
17-03-18 03:33:56.214 -07 000000610 INF: Z Motor: After move to -0.172222, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:33:56.214 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 107 ms (allowed 150 ms), total time = 1545 ms
17-03-18 03:33:56.214 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:33:56.264 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-18 03:33:56.264 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:33:56.264 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.17221813769228. ----------
17-03-18 03:33:56.264 -07 000000610 INF: Cycle	114	Tile	2	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:33:56.264 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37445, sync = True, waitForSettling = True)
17-03-18 03:33:56.264 -07 000000610 INF: Z Motor: Moving to -0.171412 mm, started at -0.172218 mm, distance = 0.81 um
17-03-18 03:33:56.264 -07 000000610 INF: FPGA: Xmit ZDACW 37445\n [Z Motor]
17-03-18 03:33:56.264 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 03:33:56.274 -07 000000610 INF: FPGA: 'ZDACW 37445' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:33:56.274 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:33:56.274 -07 000000438 INF: FPGA: Recv ZDACR 37445
17-03-18 03:33:56.284 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.284 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:33:56.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.434 -07 000000569 INF: FPGA: Recv ZSGSRD 35975
17-03-18 03:33:56.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.444 -07 000000569 INF: FPGA: Recv ZSGSRD 35969
17-03-18 03:33:56.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.454 -07 000000611 INF: FPGA: Recv ZSGSRD 35976
17-03-18 03:33:56.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.464 -07 000000569 INF: FPGA: Recv ZSGSRD 35969
17-03-18 03:33:56.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.474 -07 000000569 INF: FPGA: Recv ZSGSRD 35975
17-03-18 03:33:56.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.484 -07 000000569 INF: FPGA: Recv ZSGSRD 35980
17-03-18 03:33:56.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.494 -07 000000569 INF: FPGA: Recv ZSGSRD 35972
17-03-18 03:33:56.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.504 -07 000000569 INF: FPGA: Recv ZSGSRD 35974
17-03-18 03:33:56.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.514 -07 000000569 INF: FPGA: Recv ZSGSRD 35970
17-03-18 03:33:56.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:56.524 -07 000000569 INF: FPGA: Recv ZSGSRD 35966
17-03-18 03:33:56.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.534 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:33:56.534 -07 000000569 INF: FPGA: Recv ZPIEZORD 31863
17-03-18 03:33:56.544 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:56.544 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.714 V. Piezo Error = -9.1 V.
17-03-18 03:33:56.544 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.4 um, Read 10 ADC samples: Avg = 35973 (-170.5 uncal um), Error = 0.9 uncal um, Median = 35973 (-170.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35966 (-170.5 uncal um), Max = 35980 (-170.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:33:56.544 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35973, posNoise = 7, negNoise = 7
17-03-18 03:33:56.544 -07 000000610 INF: Z Motor: After move to -0.171412, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:33:56.544 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 03:33:56.544 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:33:56.544 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:33:56.544 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:33:56.544 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:33:56.544 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:33:56.544 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:33:56.544 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:33:56.544 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:33:56.544 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:33:56.544 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:33:56.544 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:33:56.544 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:33:56.554 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:33:56.554 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:33:56.554 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:33:56.554 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:33:56.564 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:33:56.564 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:33:56.564 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:33:56.564 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:33:56.574 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37622 150\n [Camera]
17-03-18 03:33:56.584 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:33:56.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:33:56.774 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:33:57.174 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:33:57.174 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:33:57.174 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:33:57.174 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:33:57.174 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:33:57.184 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:33:57.184 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:33:57.184 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:33:57.184 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:33:57.184 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:33:57.374 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37622 792
17-03-18 03:33:57.514 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:33:57.574 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:33:57.574 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:33:57.574 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:33:57.584 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 03:33:57.584 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:33:57.584 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:33:57.584 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:33:57.584 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:33:57.584 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:33:57.594 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 03:33:57.714 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:33:57.714 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:33:57.714 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:33:57.714 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:33:57.714 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:33:57.714 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:33:57.714 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:33:57.714 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:33:57.724 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:33:57.724 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:33:57.904 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:33:57.904 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:33:57.904 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37622 150' command took 2 ms to send, 1328 ms to get response, and 1337 ms overall
17-03-18 03:33:57.904 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.172072
17-03-18 03:33:57.914 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17207 mm
17-03-18 03:33:57.914 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:33:57.914 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:33:57.914 -07 000000430 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm
17-03-18 03:33:57.914 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:33:57.914 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 37589, sync = True, waitForSettling = False)
17-03-18 03:33:57.914 -07 000000590 INF: Z Motor: Moving to -0.172071 mm, started at -0.171422 mm, distance = -0.65 um
17-03-18 03:33:57.914 -07 000000606 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:33:57.924 -07 000000590 INF: FPGA: Xmit ZDACW 37589\n [Z Motor]
17-03-18 03:33:57.924 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:33:57.924 -07 000000430 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:33:57.924 -07 000000430 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:33:57.924 -07 000000430 INF: Y Motor: Moving 1344 steps-21
17-03-18 03:33:57.924 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:33:57.934 -07 000000590 INF: FPGA: 'ZDACW 37589' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:33:57.934 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:33:57.944 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:33:57.944 -07 000000606 INF: FPGA: Recv ZDACR 37589
17-03-18 03:33:57.954 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:33:57.954 -07 000000590 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet))
17-03-18 03:33:58.114 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 397 ms.
17-03-18 03:33:58.114 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:33:58.114 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:33:58.114 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:33:58.114 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:33:58.114 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:33:58.124 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:33:58.124 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:33:58.124 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 03:33:58.124 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-18 03:33:58.304 -07 000000438 INF: FPGA: Recv YMVTILE
17-03-18 03:33:58.304 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:33:58.354 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:33:58.364 -07 000000569 INF: FPGA: Recv YRDPOS 126081
17-03-18 03:33:58.364 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:33:58.364 -07 000000430 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:33:58.364 -07 000000430 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:33:58.364 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.840 mm, average velocity = 2.171 mm/sec
17-03-18 03:33:59.314 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:33:59.314 -07 000000502 INF: FPGA: Recv YRDPOS 126082
17-03-18 03:33:59.324 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:33:59.324 -07 000000430 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:33:59.344 -07 000000430 INF: Y Motor: After move to 61.572609, error = -0.009132, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:33:59.354 -07 000000430 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:33:59.354 -07 000000430 INF: Y Motor: Moved to 61.5635 after 1434 ms (table move)
17-03-18 03:33:59.354 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172071 mm (DAC = 37589)
17-03-18 03:33:59.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.354 -07 000000430 INF: FPGA: Recv ZSGSRD 36078
17-03-18 03:33:59.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:33:59.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.364 -07 000000606 INF: FPGA: Recv ZSGSRD 36080
17-03-18 03:33:59.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.374 -07 000000430 INF: FPGA: Recv ZSGSRD 36078
17-03-18 03:33:59.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.384 -07 000000430 INF: FPGA: Recv ZSGSRD 36081
17-03-18 03:33:59.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.394 -07 000000606 INF: FPGA: Recv ZSGSRD 36073
17-03-18 03:33:59.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.404 -07 000000430 INF: FPGA: Recv ZSGSRD 36082
17-03-18 03:33:59.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.414 -07 000000592 INF: FPGA: Recv ZSGSRD 36075
17-03-18 03:33:59.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.424 -07 000000430 INF: FPGA: Recv ZSGSRD 36065
17-03-18 03:33:59.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.434 -07 000000430 INF: FPGA: Recv ZSGSRD 36070
17-03-18 03:33:59.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.444 -07 000000512 INF: FPGA: Recv ZSGSRD 36071
17-03-18 03:33:59.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.454 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:33:59.454 -07 000000592 INF: FPGA: Recv ZPIEZORD 32027
17-03-18 03:33:59.464 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.464 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.736 V. Piezo Error = -8.9 V.
17-03-18 03:33:59.464 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.1 um, Read 10 ADC samples: Avg = 36075 (-171.2 uncal um), Error = 0.9 uncal um, Median = 36076 (-171.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 36065 (-171.1 uncal um), Max = 36082 (-171.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:33:59.464 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36075, posNoise = 7, negNoise = 10
17-03-18 03:33:59.464 -07 000000610 INF: Z Motor: After move to -0.172071, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:33:59.464 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 109 ms (allowed 150 ms), total time = 1544 ms
17-03-18 03:33:59.464 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:33:59.514 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1599 ms
17-03-18 03:33:59.514 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:33:59.514 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.5634765625, Z-position -0.172076805025161. ----------
17-03-18 03:33:59.514 -07 000000610 INF: Cycle	114	Tile	3	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:33:59.514 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37412, sync = True, waitForSettling = True)
17-03-18 03:33:59.514 -07 000000610 INF: Z Motor: Moving to -0.171261 mm, started at -0.172077 mm, distance = 0.82 um
17-03-18 03:33:59.514 -07 000000610 INF: FPGA: Xmit ZDACW 37412\n [Z Motor]
17-03-18 03:33:59.514 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:33:59.524 -07 000000610 INF: FPGA: 'ZDACW 37412' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:33:59.534 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:33:59.534 -07 000000502 INF: FPGA: Recv ZDACR 37412
17-03-18 03:33:59.544 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:33:59.544 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:33:59.554 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.979922,
17-03-18 03:33:59.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.694 -07 000000438 INF: FPGA: Recv ZSGSRD 35956
17-03-18 03:33:59.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.704 -07 000000438 INF: FPGA: Recv ZSGSRD 35952
17-03-18 03:33:59.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.714 -07 000000579 INF: FPGA: Recv ZSGSRD 35952
17-03-18 03:33:59.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.724 -07 000000438 INF: FPGA: Recv ZSGSRD 35951
17-03-18 03:33:59.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.734 -07 000000579 INF: FPGA: Recv ZSGSRD 35950
17-03-18 03:33:59.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.744 -07 000000606 INF: FPGA: Recv ZSGSRD 35944
17-03-18 03:33:59.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.754 -07 000000579 INF: FPGA: Recv ZSGSRD 35944
17-03-18 03:33:59.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.764 -07 000000606 INF: FPGA: Recv ZSGSRD 35948
17-03-18 03:33:59.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.774 -07 000000606 INF: FPGA: Recv ZSGSRD 35953
17-03-18 03:33:59.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:33:59.784 -07 000000592 INF: FPGA: Recv ZSGSRD 35950
17-03-18 03:33:59.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.794 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:33:59.794 -07 000000590 INF: FPGA: Recv ZPIEZORD 31858
17-03-18 03:33:59.804 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:33:59.804 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.709 V. Piezo Error = -9.0 V.
17-03-18 03:33:59.804 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35950 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35950 (-170.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35944 (-170.4 uncal um), Max = 35956 (-170.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:33:59.804 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35950, posNoise = 6, negNoise = 6
17-03-18 03:33:59.804 -07 000000610 INF: Z Motor: After move to -0.171261, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:33:59.804 -07 000000610 INF: Z Motor: MoveAbsStepped took 287 ms)
17-03-18 03:33:59.804 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:33:59.804 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:33:59.804 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:33:59.804 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:33:59.804 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:33:59.804 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:33:59.804 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:33:59.804 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:33:59.804 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:33:59.804 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:33:59.804 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:33:59.804 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:33:59.814 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:33:59.814 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:33:59.814 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:33:59.814 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:33:59.824 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:33:59.824 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:33:59.824 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:33:59.824 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:33:59.824 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37589 150\n [Camera]
17-03-18 03:34:00.024 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:00.434 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:00.434 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:00.434 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:00.434 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:00.434 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:34:00.434 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:00.434 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:00.444 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:00.444 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:00.444 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 03:34:00.624 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37589 792
17-03-18 03:34:00.774 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:00.834 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:34:00.834 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:34:00.834 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:00.844 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 03:34:00.844 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:34:00.844 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:00.844 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:00.844 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:34:00.844 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:00.854 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 03:34:00.974 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:00.974 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:00.974 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:00.974 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:00.974 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 03:34:00.974 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:00.974 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:00.974 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:01.114 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:01.114 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:34:01.164 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:34:01.164 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:01.164 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37589 150' command took 2 ms to send, 1328 ms to get response, and 1339 ms overall
17-03-18 03:34:01.174 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.171589
17-03-18 03:34:01.174 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17159 mm
17-03-18 03:34:01.174 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:01.174 -07 000000592 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:34:01.174 -07 000000592 INF: Y Motor: Moving to 62.4026 mm, started at 61.5635 mm, delta = 0.8391 mm
17-03-18 03:34:01.174 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:01.174 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 37484, sync = True, waitForSettling = False)
17-03-18 03:34:01.174 -07 000000430 INF: Z Motor: Moving to -0.171591 mm, started at -0.171274 mm, distance = -0.32 um
17-03-18 03:34:01.174 -07 000000569 INF: FPGA: Recv YRDPOS 126082
17-03-18 03:34:01.184 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:34:01.184 -07 000000430 INF: FPGA: Xmit ZDACW 37484\n [Z Motor]
17-03-18 03:34:01.184 -07 000000592 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:01.184 -07 000000592 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:01.184 -07 000000592 INF: Y Motor: Moving 1343 steps-20
17-03-18 03:34:01.184 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:34:01.194 -07 000000430 INF: FPGA: 'ZDACW 37484' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:34:01.194 -07 000000592 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:01.204 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:01.204 -07 000000579 INF: FPGA: Recv ZDACR 37484
17-03-18 03:34:01.214 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:34:01.214 -07 000000430 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 03:34:01.364 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:34:01.364 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:34:01.364 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:01.374 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:01.374 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:34:01.484 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:34:01.484 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:34:01.484 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:01.494 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:01.494 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 517 ms.
17-03-18 03:34:01.564 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:34:01.564 -07 000000592 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:34:01.584 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:01.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:01.614 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:01.624 -07 000000438 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:34:01.624 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:34:01.624 -07 000000592 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:01.624 -07 000000592 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 03:34:01.624 -07 000000592 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.839 mm, average velocity = 2.168 mm/sec
17-03-18 03:34:02.574 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:02.574 -07 000000579 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:34:02.584 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:02.584 -07 000000592 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:02.604 -07 000000592 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:02.604 -07 000000592 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:34:02.604 -07 000000592 INF: Y Motor: Moved to 62.3950 after 1435 ms (table move)
17-03-18 03:34:02.614 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171591 mm (DAC = 37484)
17-03-18 03:34:02.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.614 -07 000000569 INF: FPGA: Recv ZSGSRD 35994
17-03-18 03:34:02.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:34:02.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.624 -07 000000592 INF: FPGA: Recv ZSGSRD 36006
17-03-18 03:34:02.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:34:02.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.634 -07 000000606 INF: FPGA: Recv ZSGSRD 35998
17-03-18 03:34:02.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:34:02.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.644 -07 000000512 INF: FPGA: Recv ZSGSRD 35999
17-03-18 03:34:02.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.654 -07 000000512 INF: FPGA: Recv ZSGSRD 36000
17-03-18 03:34:02.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.664 -07 000000512 INF: FPGA: Recv ZSGSRD 35997
17-03-18 03:34:02.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.674 -07 000000590 INF: FPGA: Recv ZSGSRD 35999
17-03-18 03:34:02.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.684 -07 000000512 INF: FPGA: Recv ZSGSRD 36005
17-03-18 03:34:02.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.694 -07 000000592 INF: FPGA: Recv ZSGSRD 36007
17-03-18 03:34:02.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.704 -07 000000512 INF: FPGA: Recv ZSGSRD 36008
17-03-18 03:34:02.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.714 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:02.714 -07 000000579 INF: FPGA: Recv ZPIEZORD 31959
17-03-18 03:34:02.724 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.724 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.720 V. Piezo Error = -8.9 V.
17-03-18 03:34:02.724 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.6 um, Read 10 ADC samples: Avg = 36001 (-170.7 uncal um), Error = 0.9 uncal um, Median = 36000 (-170.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35994 (-170.7 uncal um), Max = 36008 (-170.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:34:02.724 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36001, posNoise = 7, negNoise = 7
17-03-18 03:34:02.724 -07 000000610 INF: Z Motor: After move to -0.171591, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:02.724 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 108 ms (allowed 150 ms), total time = 1545 ms
17-03-18 03:34:02.724 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:02.774 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-18 03:34:02.774 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:02.774 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.171601413326671. ----------
17-03-18 03:34:02.774 -07 000000610 INF: Cycle	114	Tile	4	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:02.774 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37307, sync = True, waitForSettling = True)
17-03-18 03:34:02.774 -07 000000610 INF: Z Motor: Moving to -0.170780 mm, started at -0.171601 mm, distance = 0.82 um
17-03-18 03:34:02.774 -07 000000610 INF: FPGA: Xmit ZDACW 37307\n [Z Motor]
17-03-18 03:34:02.774 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 03:34:02.784 -07 000000610 INF: FPGA: 'ZDACW 37307' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:02.784 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:02.784 -07 000000438 INF: FPGA: Recv ZDACR 37307
17-03-18 03:34:02.794 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.794 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:02.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.944 -07 000000438 INF: FPGA: Recv ZSGSRD 35880
17-03-18 03:34:02.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:02.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.954 -07 000000512 INF: FPGA: Recv ZSGSRD 35876
17-03-18 03:34:02.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.964 -07 000000606 INF: FPGA: Recv ZSGSRD 35879
17-03-18 03:34:02.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.974 -07 000000512 INF: FPGA: Recv ZSGSRD 35877
17-03-18 03:34:02.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.984 -07 000000606 INF: FPGA: Recv ZSGSRD 35876
17-03-18 03:34:02.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:02.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:02.994 -07 000000606 INF: FPGA: Recv ZSGSRD 35877
17-03-18 03:34:03.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:03.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:03.004 -07 000000611 INF: FPGA: Recv ZSGSRD 35878
17-03-18 03:34:03.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:03.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:03.014 -07 000000430 INF: FPGA: Recv ZSGSRD 35880
17-03-18 03:34:03.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:03.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:03.024 -07 000000430 INF: FPGA: Recv ZSGSRD 35876
17-03-18 03:34:03.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:03.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:03.034 -07 000000611 INF: FPGA: Recv ZSGSRD 35871
17-03-18 03:34:03.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:03.044 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:03.044 -07 000000430 INF: FPGA: Recv ZPIEZORD 31736
17-03-18 03:34:03.054 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:03.054 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.693 V. Piezo Error = -9.1 V.
17-03-18 03:34:03.054 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.8 um, Read 10 ADC samples: Avg = 35877 (-169.9 uncal um), Error = 0.9 uncal um, Median = 35877 (-169.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35871 (-169.9 uncal um), Max = 35880 (-169.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:34:03.054 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35877, posNoise = 3, negNoise = 6
17-03-18 03:34:03.054 -07 000000610 INF: Z Motor: After move to -0.170780, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:03.054 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:34:03.054 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:03.054 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:03.054 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:03.054 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:03.054 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:03.054 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:03.054 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:03.054 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:03.054 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:03.054 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:03.054 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:03.054 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:03.054 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:34:03.054 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:03.064 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:34:03.064 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:03.074 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:34:03.074 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:34:03.074 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 03:34:03.074 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:34:03.074 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37484 150\n [Camera]
17-03-18 03:34:03.274 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:03.684 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:03.684 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:03.684 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:03.684 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:03.684 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:03.684 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:03.694 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:03.694 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:34:03.694 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:03.694 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:34:03.874 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37484 792
17-03-18 03:34:04.024 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:04.064 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 03:34:04.064 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-18 03:34:04.064 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:04.064 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:04.064 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:34:04.064 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:34:04.064 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:04.074 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:04.074 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:34:04.074 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:34:04.224 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:04.224 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:04.224 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:04.224 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:04.224 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:04.224 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:04.344 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:04.344 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 03:34:04.344 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:04.344 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:34:04.414 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:04.414 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:04.414 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37484 150' command took 2 ms to send, 1325 ms to get response, and 1337 ms overall
17-03-18 03:34:04.414 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:34:04.414 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 5 at Y-position 62.39501953125, Z-Position -0.170804811021093. ------
17-03-18 03:34:04.424 -07 000000611 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:34:04.424 -07 000000606 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17727 mm
17-03-18 03:34:04.424 -07 000000606 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:04.424 -07 000000430 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:34:04.424 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:34:04.424 -07 000000512 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm
17-03-18 03:34:04.424 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 38724, sync = True, waitForSettling = False)
17-03-18 03:34:04.424 -07 000000438 INF: Z Motor: Moving to -0.177267 mm, started at -0.170805 mm, distance = -6.46 um
17-03-18 03:34:04.434 -07 000000611 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:34:04.434 -07 000000438 INF: FPGA: Xmit ZDACW 38724\n [Z Motor]
17-03-18 03:34:04.434 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:34:04.444 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:04.444 -07 000000438 INF: FPGA: 'ZDACW 38724' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:34:04.444 -07 000000502 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:34:04.454 -07 000000611 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:34:04.454 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 03:34:04.454 -07 000000512 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:04.454 -07 000000512 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:04.454 -07 000000512 INF: Y Motor: Moving 1340 steps-16
17-03-18 03:34:04.464 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:04.464 -07 000000590 INF: FPGA: Recv ZDACR 38724
17-03-18 03:34:04.474 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:04.474 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:04.474 -07 000000438 INF: Z Motor: MoveAbsStepped took 43 ms (did NOT wait for settling yet))
17-03-18 03:34:04.654 -07 000000569 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:34:04.654 -07 000000611 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:34:04.724 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:34:04.724 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:34:04.724 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:04.724 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:34:04.724 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:34:04.724 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:04.734 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:04.734 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:04.734 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 508 ms.
17-03-18 03:34:04.734 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 509 ms.
17-03-18 03:34:04.844 -07 000000592 INF: FPGA: Recv YMVTILE
17-03-18 03:34:04.844 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:34:04.924 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:04.924 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.985358,
17-03-18 03:34:04.924 -07 000000430 INF: FPGA: Recv YRDPOS 129481
17-03-18 03:34:04.934 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:34:04.934 -07 000000512 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:04.934 -07 000000512 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:34:04.934 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.110 mm/sec
17-03-18 03:34:05.884 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:05.884 -07 000000611 INF: FPGA: Recv YRDPOS 129481
17-03-18 03:34:05.894 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:05.894 -07 000000512 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:05.914 -07 000000512 INF: Y Motor: After move to 63.232609, error = -0.009464, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:05.924 -07 000000512 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:34:05.924 -07 000000512 INF: Y Motor: Moved to 63.2231 after 1493 ms (table move)
17-03-18 03:34:05.924 -07 000000606 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177267 mm (DAC = 38724)
17-03-18 03:34:05.924 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:05.924 -07 000000592 INF: FPGA: Recv ZSGSRD 36888
17-03-18 03:34:05.934 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:34:05.934 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:05.934 -07 000000611 INF: FPGA: Recv ZSGSRD 36887
17-03-18 03:34:05.944 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:05.944 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:05.944 -07 000000569 INF: FPGA: Recv ZSGSRD 36884
17-03-18 03:34:05.954 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:05.954 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:05.954 -07 000000512 INF: FPGA: Recv ZSGSRD 36876
17-03-18 03:34:05.964 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:05.964 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:05.964 -07 000000569 INF: FPGA: Recv ZSGSRD 36886
17-03-18 03:34:05.974 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:05.974 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:05.974 -07 000000590 INF: FPGA: Recv ZSGSRD 36881
17-03-18 03:34:05.984 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:05.984 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:05.984 -07 000000512 INF: FPGA: Recv ZSGSRD 36881
17-03-18 03:34:05.994 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:05.994 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:05.994 -07 000000592 INF: FPGA: Recv ZSGSRD 36889
17-03-18 03:34:06.004 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:06.004 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:06.004 -07 000000512 INF: FPGA: Recv ZSGSRD 36886
17-03-18 03:34:06.014 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:06.014 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:06.014 -07 000000569 INF: FPGA: Recv ZSGSRD 36887
17-03-18 03:34:06.024 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:06.024 -07 000000606 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:06.024 -07 000000592 INF: FPGA: Recv ZPIEZORD 33103
17-03-18 03:34:06.034 -07 000000606 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:06.034 -07 000000606 INF: Z Motor: Piezo is near 50.7 V (nominally 0 to 100 V), expect near 59.1 V, since DAC is at 5.909 V. Piezo Error = -8.4 V.
17-03-18 03:34:06.034 -07 000000606 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.3 um, Read 10 ADC samples: Avg = 36884 (-176.4 uncal um), Error = 0.9 uncal um, Median = 36886 (-176.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36876 (-176.3 uncal um), Max = 36889 (-176.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:34:06.034 -07 000000606 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36884, posNoise = 5, negNoise = 8
17-03-18 03:34:06.034 -07 000000606 INF: Z Motor: After move to -0.177267, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:06.034 -07 000000606 INF: Z Motor: Settle wait time = 1496 ms, measure time = 107 ms (allowed 150 ms), total time = 1603 ms
17-03-18 03:34:06.034 -07 000000606 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:06.084 -07 000000606 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1657 ms
17-03-18 03:34:06.084 -07 000000606 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:06.084 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:06.084 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:06.084 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:06.084 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:06.084 -07 000000438 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:34:06.084 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:06.084 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:34:06.084 -07 000000438 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:34:06.084 -07 000000438 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:34:06.094 -07 000000438 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:34:06.104 -07 000000438 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:34:06.104 -07 000000438 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 03:34:06.104 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:34:06.154 -07 000000590 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:34:06.454 -07 000000592 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:34:06.454 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:34:06.454 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:34:06.454 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610472208, 0x0, 559484976) start.
17-03-18 03:34:06.494 -07 000000569 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:34:06.494 -07 000000592 INF: FPGA: Recv CAMSNAP
17-03-18 03:34:06.494 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall
17-03-18 03:34:06.584 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610472208, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:34:06.584 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:06.584 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:34:06.584 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-18 03:34:06.584 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:06.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:06.594 -07 000000590 INF: Autofocus start
17-03-18 03:34:06.594 -07 000000590 INF: MeasureProfile start
17-03-18 03:34:06.594 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:34:06.594 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:34:06.604 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:34:06.604 -07 000000569 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:34:06.604 -07 000000590 INF: MeasureProfile done
17-03-18 03:34:06.604 -07 000000590 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:34:06.604 -07 000000590 INF: Autofocus finished
17-03-18 03:34:06.804 -07 000000502 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:34:06.804 -07 000000569 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-18 03:34:06.804 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22314453125, Z-position -0.177273992647846. ----------
17-03-18 03:34:06.804 -07 000000610 INF: Cycle	114	Tile	5	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:06.814 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37239, sync = True, waitForSettling = True)
17-03-18 03:34:06.814 -07 000000610 INF: Z Motor: Moving to -0.170469 mm, started at -0.177274 mm, distance = 6.80 um
17-03-18 03:34:06.814 -07 000000610 INF: FPGA: Xmit ZDACW 37239\n [Z Motor]
17-03-18 03:34:06.814 -07 000000592 INF: FPGA: Recv ZDACW
17-03-18 03:34:06.824 -07 000000610 INF: FPGA: 'ZDACW 37239' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:34:06.824 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:06.824 -07 000000502 INF: FPGA: Recv ZDACR 37239
17-03-18 03:34:06.834 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:06.834 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:06.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:06.984 -07 000000579 INF: FPGA: Recv ZSGSRD 35830
17-03-18 03:34:06.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:06.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:06.994 -07 000000611 INF: FPGA: Recv ZSGSRD 35832
17-03-18 03:34:07.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:07.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:07.004 -07 000000579 INF: FPGA: Recv ZSGSRD 35830
17-03-18 03:34:07.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:07.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:07.014 -07 000000611 INF: FPGA: Recv ZSGSRD 35826
17-03-18 03:34:07.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:07.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:07.024 -07 000000611 INF: FPGA: Recv ZSGSRD 35828
17-03-18 03:34:07.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:07.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:07.034 -07 000000430 INF: FPGA: Recv ZSGSRD 35824
17-03-18 03:34:07.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:07.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:07.044 -07 000000611 INF: FPGA: Recv ZSGSRD 35828
17-03-18 03:34:07.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:07.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:07.054 -07 000000611 INF: FPGA: Recv ZSGSRD 35826
17-03-18 03:34:07.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:07.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:07.064 -07 000000579 INF: FPGA: Recv ZSGSRD 35827
17-03-18 03:34:07.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:07.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:07.074 -07 000000592 INF: FPGA: Recv ZSGSRD 35827
17-03-18 03:34:07.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:07.084 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:07.084 -07 000000579 INF: FPGA: Recv ZPIEZORD 31671
17-03-18 03:34:07.094 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:07.094 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.682 V. Piezo Error = -9.2 V.
17-03-18 03:34:07.094 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35828 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35828 (-169.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35824 (-169.6 uncal um), Max = 35832 (-169.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:34:07.094 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35828, posNoise = 4, negNoise = 4
17-03-18 03:34:07.094 -07 000000610 INF: Z Motor: After move to -0.170469, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:07.094 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:34:07.094 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:07.094 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:07.094 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:07.094 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:07.094 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:07.094 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:07.094 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:07.094 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:07.094 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:34:07.094 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:07.094 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:07.094 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:07.104 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:34:07.104 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:07.104 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:34:07.104 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:07.114 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 11 ms.
17-03-18 03:34:07.114 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:34:07.114 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-18 03:34:07.114 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:34:07.114 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37416 150\n [Camera]
17-03-18 03:34:07.314 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:07.724 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:07.724 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:07.724 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:07.724 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:07.724 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:07.724 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:07.724 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:07.724 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:34:07.734 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:07.734 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:34:07.914 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37416 792
17-03-18 03:34:08.074 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 945
17-03-18 03:34:08.104 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:34:08.104 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:34:08.104 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:08.104 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:34:08.104 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:34:08.104 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:08.104 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:08.104 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:34:08.104 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:08.114 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:34:08.264 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:08.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:08.264 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:08.264 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:08.264 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:34:08.264 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:08.264 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:08.264 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:08.264 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:08.274 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1111624864, 0x0, 418435064) start.
17-03-18 03:34:08.454 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:08.454 -07 000000611 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:08.454 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37416 150' command took 2 ms to send, 1325 ms to get response, and 1338 ms overall
17-03-18 03:34:08.454 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.170943
17-03-18 03:34:08.454 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17094 mm
17-03-18 03:34:08.454 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:08.464 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:34:08.464 -07 000000430 INF: Y Motor: Moving to 64.0626 mm, started at 63.2231 mm, delta = 0.8395 mm
17-03-18 03:34:08.464 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:08.464 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 37343, sync = True, waitForSettling = False)
17-03-18 03:34:08.464 -07 000000579 INF: Z Motor: Moving to -0.170945 mm, started at -0.170490 mm, distance = -0.46 um
17-03-18 03:34:08.464 -07 000000512 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:34:08.474 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:08.474 -07 000000430 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:08.474 -07 000000579 INF: FPGA: Xmit ZDACW 37343\n [Z Motor]
17-03-18 03:34:08.474 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 03:34:08.474 -07 000000430 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:08.474 -07 000000430 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:34:08.484 -07 000000579 INF: FPGA: 'ZDACW 37343' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:34:08.484 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:08.494 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:08.494 -07 000000438 INF: FPGA: Recv ZDACR 37343
17-03-18 03:34:08.504 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:34:08.504 -07 000000579 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-18 03:34:08.654 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:34:08.654 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:34:08.654 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:08.654 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1111624864, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:34:08.654 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:34:08.654 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:08.654 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:34:08.654 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:34:08.654 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:08.664 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:34:08.864 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 03:34:08.864 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 387 ms overall
17-03-18 03:34:08.914 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:08.914 -07 000000512 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:34:08.924 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:34:08.924 -07 000000430 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:08.924 -07 000000430 INF: Y Motor: Position error before settling (table move) = -12 encoder counts (-0.006 mm)
17-03-18 03:34:08.924 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.839 mm, average velocity = 2.169 mm/sec
17-03-18 03:34:09.874 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:09.874 -07 000000592 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:34:09.884 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:09.884 -07 000000430 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:09.904 -07 000000430 INF: Y Motor: After move to 64.062607, error = -0.005966, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:09.904 -07 000000430 INF: Y Motor: Position error after settling (table move) = -12 encoder counts (-0.006 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:34:09.904 -07 000000430 INF: Y Motor: Moved to 64.0566 after 1446 ms (table move)
17-03-18 03:34:09.904 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170945 mm (DAC = 37343)
17-03-18 03:34:09.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:09.914 -07 000000430 INF: FPGA: Recv ZSGSRD 35907
17-03-18 03:34:09.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:34:09.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:09.914 -07 000000512 INF: FPGA: Recv ZSGSRD 35898
17-03-18 03:34:09.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:34:09.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:09.924 -07 000000512 INF: FPGA: Recv ZSGSRD 35899
17-03-18 03:34:09.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:09.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:09.934 -07 000000512 INF: FPGA: Recv ZSGSRD 35903
17-03-18 03:34:09.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:09.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:09.944 -07 000000512 INF: FPGA: Recv ZSGSRD 35899
17-03-18 03:34:09.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:09.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:09.954 -07 000000512 INF: FPGA: Recv ZSGSRD 35897
17-03-18 03:34:09.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:09.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:09.964 -07 000000512 INF: FPGA: Recv ZSGSRD 35898
17-03-18 03:34:09.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:09.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:09.984 -07 000000611 INF: FPGA: Recv ZSGSRD 35907
17-03-18 03:34:09.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:34:09.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:09.994 -07 000000430 INF: FPGA: Recv ZSGSRD 35909
17-03-18 03:34:10.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:10.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:10.004 -07 000000430 INF: FPGA: Recv ZSGSRD 35904
17-03-18 03:34:10.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:10.014 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:10.014 -07 000000579 INF: FPGA: Recv ZPIEZORD 31800
17-03-18 03:34:10.024 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:10.024 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.698 V. Piezo Error = -9.0 V.
17-03-18 03:34:10.024 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.9 um, Read 10 ADC samples: Avg = 35902 (-170.1 uncal um), Error = 0.9 uncal um, Median = 35901 (-170.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35897 (-170.1 uncal um), Max = 35909 (-170.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:34:10.024 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35902, posNoise = 7, negNoise = 5
17-03-18 03:34:10.024 -07 000000610 INF: Z Motor: After move to -0.170945, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:10.024 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 112 ms (allowed 150 ms), total time = 1559 ms
17-03-18 03:34:10.024 -07 000000610 INF: Z Motor: Waiting extra 38 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:10.064 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms
17-03-18 03:34:10.064 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:10.064 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.056640625, Z-position -0.170965416324637. ----------
17-03-18 03:34:10.064 -07 000000610 INF: Cycle	114	Tile	6	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:10.064 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37166, sync = True, waitForSettling = True)
17-03-18 03:34:10.064 -07 000000610 INF: Z Motor: Moving to -0.170135 mm, started at -0.170965 mm, distance = 0.83 um
17-03-18 03:34:10.064 -07 000000610 INF: FPGA: Xmit ZDACW 37166\n [Z Motor]
17-03-18 03:34:10.064 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:34:10.074 -07 000000610 INF: FPGA: 'ZDACW 37166' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:10.074 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:10.074 -07 000000430 INF: FPGA: Recv ZDACR 37166
17-03-18 03:34:10.084 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:10.084 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:10.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:10.234 -07 000000430 INF: FPGA: Recv ZSGSRD 35773
17-03-18 03:34:10.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:10.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:10.244 -07 000000579 INF: FPGA: Recv ZSGSRD 35779
17-03-18 03:34:10.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:10.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:10.254 -07 000000512 INF: FPGA: Recv ZSGSRD 35772
17-03-18 03:34:10.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:10.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:10.264 -07 000000579 INF: FPGA: Recv ZSGSRD 35774
17-03-18 03:34:10.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:10.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:10.294 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.999021,
17-03-18 03:34:10.294 -07 000000512 INF: FPGA: Recv ZSGSRD 35774
17-03-18 03:34:10.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:10.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:10.324 -07 000000592 INF: FPGA: Recv ZSGSRD 35774
17-03-18 03:34:10.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:10.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:10.354 -07 000000611 INF: FPGA: Recv ZSGSRD 35774
17-03-18 03:34:10.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:10.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:10.364 -07 000000611 INF: FPGA: Recv ZSGSRD 35775
17-03-18 03:34:10.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:10.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:10.374 -07 000000611 INF: FPGA: Recv ZSGSRD 35770
17-03-18 03:34:10.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:10.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:10.384 -07 000000502 INF: FPGA: Recv ZSGSRD 35776
17-03-18 03:34:10.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:10.394 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:10.394 -07 000000512 INF: FPGA: Recv ZPIEZORD 31572
17-03-18 03:34:10.404 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:10.404 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.671 V. Piezo Error = -9.3 V.
17-03-18 03:34:10.404 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.1 um, Read 10 ADC samples: Avg = 35774 (-169.3 uncal um), Error = 0.9 uncal um, Median = 35774 (-169.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35770 (-169.2 uncal um), Max = 35779 (-169.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:34:10.404 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35774, posNoise = 5, negNoise = 4
17-03-18 03:34:10.404 -07 000000610 INF: Z Motor: After move to -0.170135, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:10.404 -07 000000610 INF: Z Motor: MoveAbsStepped took 336 ms)
17-03-18 03:34:10.404 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:10.404 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:10.404 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:10.404 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:10.404 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:10.404 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:10.404 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:10.404 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:10.404 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:10.404 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:10.404 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:10.404 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:10.404 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:34:10.404 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:10.414 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:34:10.414 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:10.424 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:34:10.424 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:34:10.424 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:34:10.424 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:34:10.424 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37343 150\n [Camera]
17-03-18 03:34:10.624 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:11.034 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:11.034 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:11.034 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:11.034 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:11.034 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) start.
17-03-18 03:34:11.034 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:11.034 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:11.034 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:11.034 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:11.034 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 03:34:11.224 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37343 792
17-03-18 03:34:11.374 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:11.414 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:34:11.414 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:34:11.414 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:11.414 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:34:11.414 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:34:11.414 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:11.414 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:11.414 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:34:11.424 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:11.424 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:34:11.574 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:11.574 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:11.574 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:11.574 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:11.574 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-18 03:34:11.574 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:11.574 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:11.574 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:11.574 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:11.574 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:34:11.584 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:11.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:11.764 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1330
17-03-18 03:34:11.764 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:11.764 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37343 150' command took 2 ms to send, 1328 ms to get response, and 1340 ms overall
17-03-18 03:34:11.894 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.170590
17-03-18 03:34:11.894 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17059 mm
17-03-18 03:34:11.894 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:11.894 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:34:11.894 -07 000000606 INF: Y Motor: Moving to 64.8926 mm, started at 64.0566 mm, delta = 0.8360 mm
17-03-18 03:34:11.894 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:11.894 -07 000000592 INF: Z Motor: Entering MoveAbsStepped (DAC = 37265, sync = True, waitForSettling = False)
17-03-18 03:34:11.894 -07 000000592 INF: Z Motor: Moving to -0.170588 mm, started at -0.170143 mm, distance = -0.45 um
17-03-18 03:34:11.904 -07 000000592 INF: FPGA: Xmit ZDACW 37265\n [Z Motor]
17-03-18 03:34:11.904 -07 000000512 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:34:11.904 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:34:11.904 -07 000000606 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:11.904 -07 000000606 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:11.904 -07 000000606 INF: Y Motor: Moving 1338 steps-12
17-03-18 03:34:11.904 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:34:11.914 -07 000000592 INF: FPGA: 'ZDACW 37265' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:11.914 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:11.924 -07 000000592 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:11.924 -07 000000438 INF: FPGA: Recv ZDACR 37265
17-03-18 03:34:11.934 -07 000000592 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:34:11.934 -07 000000592 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:34:11.964 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:34:11.964 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:34:11.964 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:11.964 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 03:34:11.964 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:34:11.964 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:11.964 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:11.964 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:11.964 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:34:11.974 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:34:12.284 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:34:12.284 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 03:34:12.334 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:12.344 -07 000000579 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:34:12.344 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:12.344 -07 000000606 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:12.344 -07 000000606 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:34:12.344 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.836 mm, average velocity = 2.166 mm/sec
17-03-18 03:34:13.294 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:13.294 -07 000000430 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:34:13.304 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.304 -07 000000606 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:13.324 -07 000000606 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:13.324 -07 000000606 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:34:13.324 -07 000000606 INF: Y Motor: Moved to 64.8784 after 1431 ms (table move)
17-03-18 03:34:13.334 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170588 mm (DAC = 37265)
17-03-18 03:34:13.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.334 -07 000000611 INF: FPGA: Recv ZSGSRD 35841
17-03-18 03:34:13.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:34:13.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.344 -07 000000611 INF: FPGA: Recv ZSGSRD 35849
17-03-18 03:34:13.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.354 -07 000000592 INF: FPGA: Recv ZSGSRD 35849
17-03-18 03:34:13.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.364 -07 000000611 INF: FPGA: Recv ZSGSRD 35851
17-03-18 03:34:13.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.374 -07 000000611 INF: FPGA: Recv ZSGSRD 35848
17-03-18 03:34:13.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.384 -07 000000611 INF: FPGA: Recv ZSGSRD 35847
17-03-18 03:34:13.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.394 -07 000000592 INF: FPGA: Recv ZSGSRD 35841
17-03-18 03:34:13.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.404 -07 000000438 INF: FPGA: Recv ZSGSRD 35841
17-03-18 03:34:13.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.414 -07 000000592 INF: FPGA: Recv ZSGSRD 35843
17-03-18 03:34:13.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.424 -07 000000438 INF: FPGA: Recv ZSGSRD 35848
17-03-18 03:34:13.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.434 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:13.434 -07 000000592 INF: FPGA: Recv ZPIEZORD 31707
17-03-18 03:34:13.444 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.444 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.686 V. Piezo Error = -9.1 V.
17-03-18 03:34:13.444 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.6 um, Read 10 ADC samples: Avg = 35846 (-169.7 uncal um), Error = 0.9 uncal um, Median = 35848 (-169.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35841 (-169.7 uncal um), Max = 35851 (-169.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:34:13.444 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35846, posNoise = 5, negNoise = 5
17-03-18 03:34:13.444 -07 000000610 INF: Z Motor: After move to -0.170588, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:13.444 -07 000000610 INF: Z Motor: Settle wait time = 1432 ms, measure time = 109 ms (allowed 150 ms), total time = 1541 ms
17-03-18 03:34:13.444 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:13.494 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-18 03:34:13.494 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:13.494 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.170605660444698. ----------
17-03-18 03:34:13.494 -07 000000610 INF: Cycle	114	Tile	7	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:13.494 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37089, sync = True, waitForSettling = True)
17-03-18 03:34:13.494 -07 000000610 INF: Z Motor: Moving to -0.169783 mm, started at -0.170606 mm, distance = 0.82 um
17-03-18 03:34:13.494 -07 000000610 INF: FPGA: Xmit ZDACW 37089\n [Z Motor]
17-03-18 03:34:13.494 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:34:13.504 -07 000000610 INF: FPGA: 'ZDACW 37089' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:34:13.504 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:13.504 -07 000000579 INF: FPGA: Recv ZDACR 37089
17-03-18 03:34:13.514 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.514 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:13.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.664 -07 000000579 INF: FPGA: Recv ZSGSRD 35731
17-03-18 03:34:13.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:13.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.674 -07 000000579 INF: FPGA: Recv ZSGSRD 35718
17-03-18 03:34:13.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.684 -07 000000579 INF: FPGA: Recv ZSGSRD 35723
17-03-18 03:34:13.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.694 -07 000000502 INF: FPGA: Recv ZSGSRD 35714
17-03-18 03:34:13.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.704 -07 000000502 INF: FPGA: Recv ZSGSRD 35717
17-03-18 03:34:13.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.714 -07 000000579 INF: FPGA: Recv ZSGSRD 35724
17-03-18 03:34:13.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.724 -07 000000579 INF: FPGA: Recv ZSGSRD 35713
17-03-18 03:34:13.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.734 -07 000000579 INF: FPGA: Recv ZSGSRD 35718
17-03-18 03:34:13.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.744 -07 000000579 INF: FPGA: Recv ZSGSRD 35722
17-03-18 03:34:13.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:13.754 -07 000000579 INF: FPGA: Recv ZSGSRD 35722
17-03-18 03:34:13.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.764 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:13.764 -07 000000579 INF: FPGA: Recv ZPIEZORD 31507
17-03-18 03:34:13.774 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:13.774 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.659 V. Piezo Error = -9.3 V.
17-03-18 03:34:13.774 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35720 (-168.9 uncal um), Error = 0.9 uncal um, Median = 35720 (-168.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 35713 (-168.9 uncal um), Max = 35731 (-169.0 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:34:13.774 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35720, posNoise = 11, negNoise = 7
17-03-18 03:34:13.774 -07 000000610 INF: Z Motor: After move to -0.169783, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:13.774 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:34:13.774 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:13.774 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:13.774 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:13.774 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:13.774 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:13.774 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:13.774 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:13.774 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:13.774 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:13.774 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:13.774 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:13.774 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:13.784 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:34:13.784 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:13.784 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:34:13.784 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:13.794 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:34:13.794 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:34:13.794 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:34:13.794 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:34:13.804 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37265 150\n [Camera]
17-03-18 03:34:13.994 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:14.404 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:14.404 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:14.404 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:14.414 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:14.414 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:14.414 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:14.414 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:14.414 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:34:14.414 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:14.414 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:34:14.594 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37265 792
17-03-18 03:34:14.744 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:14.784 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:34:14.784 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:34:14.784 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:14.784 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:34:14.784 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:34:14.784 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:14.794 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:14.794 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:34:14.794 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:14.794 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:34:14.944 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:14.944 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:14.944 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:14.944 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:14.944 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:14.954 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:14.954 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:14.954 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 03:34:14.954 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:14.954 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 03:34:15.134 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:15.134 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:15.134 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37265 150' command took 2 ms to send, 1327 ms to get response, and 1337 ms overall
17-03-18 03:34:15.134 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.170223
17-03-18 03:34:15.144 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17022 mm
17-03-18 03:34:15.144 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:15.144 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 37185, sync = True, waitForSettling = False)
17-03-18 03:34:15.144 -07 000000611 INF: Z Motor: Moving to -0.170222 mm, started at -0.169796 mm, distance = -0.43 um
17-03-18 03:34:15.144 -07 000000611 INF: FPGA: Xmit ZDACW 37185\n [Z Motor]
17-03-18 03:34:15.144 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:34:15.144 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:34:15.144 -07 000000512 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm
17-03-18 03:34:15.154 -07 000000611 INF: FPGA: 'ZDACW 37185' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:34:15.154 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:15.154 -07 000000430 INF: FPGA: Recv ZDACR 37185
17-03-18 03:34:15.164 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:15.164 -07 000000611 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet))
17-03-18 03:34:15.164 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:15.164 -07 000000424 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:34:15.174 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-18 03:34:15.174 -07 000000512 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:15.174 -07 000000512 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:15.174 -07 000000512 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:34:15.174 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:15.334 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:34:15.334 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:34:15.334 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:15.334 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:34:15.334 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:34:15.334 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:15.334 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:15.334 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:34:15.334 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:15.344 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:34:15.544 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:34:15.544 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:34:15.604 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:15.614 -07 000000579 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:34:15.614 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:34:15.614 -07 000000512 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:15.614 -07 000000512 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:34:15.614 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.233 mm/sec
17-03-18 03:34:15.674 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.018051,
17-03-18 03:34:16.564 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:16.564 -07 000000569 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:34:16.574 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:16.574 -07 000000512 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:16.584 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:16.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:16.604 -07 000000512 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:16.604 -07 000000512 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:34:16.604 -07 000000512 INF: Y Motor: Moved to 65.7134 after 1461 ms (table move)
17-03-18 03:34:16.614 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170222 mm (DAC = 37185)
17-03-18 03:34:16.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.614 -07 000000606 INF: FPGA: Recv ZSGSRD 35798
17-03-18 03:34:16.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.624 -07 000000579 INF: FPGA: Recv ZSGSRD 35780
17-03-18 03:34:16.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.634 -07 000000592 INF: FPGA: Recv ZSGSRD 35784
17-03-18 03:34:16.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.644 -07 000000501 INF: FPGA: Recv ZSGSRD 35785
17-03-18 03:34:16.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.654 -07 000000592 INF: FPGA: Recv ZSGSRD 35785
17-03-18 03:34:16.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.664 -07 000000501 INF: FPGA: Recv ZSGSRD 35790
17-03-18 03:34:16.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.674 -07 000000611 INF: FPGA: Recv ZSGSRD 35783
17-03-18 03:34:16.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.684 -07 000000569 INF: FPGA: Recv ZSGSRD 35789
17-03-18 03:34:16.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.694 -07 000000512 INF: FPGA: Recv ZSGSRD 35797
17-03-18 03:34:16.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.704 -07 000000611 INF: FPGA: Recv ZSGSRD 35788
17-03-18 03:34:16.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.714 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:16.714 -07 000000502 INF: FPGA: Recv ZPIEZORD 31612
17-03-18 03:34:16.724 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.724 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.674 V. Piezo Error = -9.2 V.
17-03-18 03:34:16.724 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.2 um, Read 10 ADC samples: Avg = 35788 (-169.4 uncal um), Error = 0.9 uncal um, Median = 35786 (-169.3 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 35780 (-169.3 uncal um), Max = 35798 (-169.4 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:34:16.724 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35788, posNoise = 10, negNoise = 8
17-03-18 03:34:16.724 -07 000000610 INF: Z Motor: After move to -0.170222, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:16.724 -07 000000610 INF: Z Motor: Settle wait time = 1467 ms, measure time = 110 ms (allowed 150 ms), total time = 1577 ms
17-03-18 03:34:16.724 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:16.764 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1619 ms
17-03-18 03:34:16.764 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:16.764 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.170233056140476. ----------
17-03-18 03:34:16.764 -07 000000610 INF: Cycle	114	Tile	8	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:16.764 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37008, sync = True, waitForSettling = True)
17-03-18 03:34:16.764 -07 000000610 INF: Z Motor: Moving to -0.169412 mm, started at -0.170233 mm, distance = 0.82 um
17-03-18 03:34:16.764 -07 000000610 INF: FPGA: Xmit ZDACW 37008\n [Z Motor]
17-03-18 03:34:16.774 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:34:16.774 -07 000000610 INF: FPGA: 'ZDACW 37008' command took 0 ms to send, 2 ms to get response, and 7 ms overall
17-03-18 03:34:16.774 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:16.774 -07 000000569 INF: FPGA: Recv ZDACR 37008
17-03-18 03:34:16.784 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:34:16.784 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:16.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.934 -07 000000512 INF: FPGA: Recv ZSGSRD 35662
17-03-18 03:34:16.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:16.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.944 -07 000000438 INF: FPGA: Recv ZSGSRD 35659
17-03-18 03:34:16.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.954 -07 000000611 INF: FPGA: Recv ZSGSRD 35661
17-03-18 03:34:16.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.964 -07 000000569 INF: FPGA: Recv ZSGSRD 35657
17-03-18 03:34:16.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.974 -07 000000611 INF: FPGA: Recv ZSGSRD 35662
17-03-18 03:34:16.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.984 -07 000000579 INF: FPGA: Recv ZSGSRD 35659
17-03-18 03:34:16.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:16.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:16.994 -07 000000502 INF: FPGA: Recv ZSGSRD 35658
17-03-18 03:34:17.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:17.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:17.004 -07 000000606 INF: FPGA: Recv ZSGSRD 35662
17-03-18 03:34:17.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:17.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:17.014 -07 000000501 INF: FPGA: Recv ZSGSRD 35664
17-03-18 03:34:17.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:17.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:17.024 -07 000000606 INF: FPGA: Recv ZSGSRD 35663
17-03-18 03:34:17.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:17.034 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:17.034 -07 000000611 INF: FPGA: Recv ZPIEZORD 31421
17-03-18 03:34:17.044 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:17.044 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.647 V. Piezo Error = -9.3 V.
17-03-18 03:34:17.044 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.4 um, Read 10 ADC samples: Avg = 35661 (-168.5 uncal um), Error = 0.9 uncal um, Median = 35662 (-168.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35657 (-168.5 uncal um), Max = 35664 (-168.6 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:34:17.044 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35661, posNoise = 3, negNoise = 4
17-03-18 03:34:17.044 -07 000000610 INF: Z Motor: After move to -0.169412, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:17.044 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:34:17.044 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:17.044 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:17.044 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:17.044 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:17.044 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:17.044 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:17.044 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:17.044 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:17.044 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:17.044 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:17.044 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:17.044 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:17.054 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:34:17.054 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:17.054 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:34:17.054 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:17.064 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:34:17.064 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:34:17.064 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:34:17.064 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:34:17.064 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37185 150\n [Camera]
17-03-18 03:34:17.274 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 196
17-03-18 03:34:17.674 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:17.674 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:17.674 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:17.674 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:17.674 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:34:17.674 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:17.674 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:17.684 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:17.684 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:17.684 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:34:17.874 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37185 792
17-03-18 03:34:18.014 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:18.054 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:34:18.064 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:34:18.064 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:18.064 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:34:18.064 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:34:18.064 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:18.064 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:18.064 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:34:18.064 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:18.074 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:34:18.214 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:18.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:18.214 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:18.334 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:18.334 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:18.334 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:18.344 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:18.344 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:34:18.344 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:18.344 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:34:18.404 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:18.404 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:18.404 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37185 150' command took 2 ms to send, 1327 ms to get response, and 1337 ms overall
17-03-18 03:34:18.404 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:34:18.404 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 9 at Y-position 65.71337890625, Z-Position -0.169417181198472. ------
17-03-18 03:34:18.414 -07 000000512 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.17590 mm
17-03-18 03:34:18.414 -07 000000512 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:18.414 -07 000000502 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:34:18.414 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:34:18.414 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:34:18.414 -07 000000501 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm
17-03-18 03:34:18.414 -07 000000592 INF: Z Motor: Entering MoveAbsStepped (DAC = 38425, sync = True, waitForSettling = False)
17-03-18 03:34:18.414 -07 000000592 INF: Z Motor: Moving to -0.175898 mm, started at -0.169417 mm, distance = -6.48 um
17-03-18 03:34:18.424 -07 000000502 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:34:18.424 -07 000000592 INF: FPGA: Xmit ZDACW 38425\n [Z Motor]
17-03-18 03:34:18.424 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:34:18.434 -07 000000592 INF: FPGA: 'ZDACW 38425' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:34:18.434 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:18.434 -07 000000569 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:34:18.444 -07 000000502 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:34:18.444 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-18 03:34:18.444 -07 000000501 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:18.444 -07 000000501 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:18.444 -07 000000501 INF: Y Motor: Moving 1343 steps-19
17-03-18 03:34:18.454 -07 000000592 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:18.454 -07 000000579 INF: FPGA: Recv ZDACR 38425
17-03-18 03:34:18.464 -07 000000592 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:18.464 -07 000000592 INF: Z Motor: MoveAbsStepped took 42 ms (did NOT wait for settling yet))
17-03-18 03:34:18.464 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:18.644 -07 000000579 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:34:18.644 -07 000000502 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:34:18.714 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:34:18.724 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:34:18.724 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:18.724 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:34:18.724 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:34:18.724 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:18.724 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:18.724 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:18.724 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 509 ms.
17-03-18 03:34:18.734 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:34:18.834 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 03:34:18.834 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 396 ms overall
17-03-18 03:34:18.884 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:18.894 -07 000000444 INF: FPGA: Recv YRDPOS 136270
17-03-18 03:34:18.894 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:34:18.894 -07 000000501 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:18.894 -07 000000501 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:34:18.894 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.839 mm, average velocity = 2.119 mm/sec
17-03-18 03:34:19.844 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:19.844 -07 000000606 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:34:19.854 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:19.854 -07 000000501 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:19.884 -07 000000501 INF: Y Motor: After move to 66.552605, error = -0.014030, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:19.884 -07 000000501 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:34:19.884 -07 000000501 INF: Y Motor: Moved to 66.5386 after 1463 ms (table move)
17-03-18 03:34:19.884 -07 000000512 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175898 mm (DAC = 38425)
17-03-18 03:34:19.884 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:19.884 -07 000000590 INF: FPGA: Recv ZSGSRD 36675
17-03-18 03:34:19.894 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:34:19.894 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:19.894 -07 000000611 INF: FPGA: Recv ZSGSRD 36673
17-03-18 03:34:19.904 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:19.904 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:19.904 -07 000000591 INF: FPGA: Recv ZSGSRD 36672
17-03-18 03:34:19.914 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:19.914 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:19.914 -07 000000502 INF: FPGA: Recv ZSGSRD 36667
17-03-18 03:34:19.924 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:19.924 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:19.924 -07 000000606 INF: FPGA: Recv ZSGSRD 36669
17-03-18 03:34:19.934 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:19.934 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:19.934 -07 000000444 INF: FPGA: Recv ZSGSRD 36668
17-03-18 03:34:19.944 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:19.944 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:19.944 -07 000000502 INF: FPGA: Recv ZSGSRD 36671
17-03-18 03:34:19.954 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:19.954 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:19.954 -07 000000444 INF: FPGA: Recv ZSGSRD 36673
17-03-18 03:34:19.964 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:19.964 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:19.964 -07 000000606 INF: FPGA: Recv ZSGSRD 36668
17-03-18 03:34:19.974 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:19.974 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:19.974 -07 000000502 INF: FPGA: Recv ZSGSRD 36671
17-03-18 03:34:19.984 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:19.984 -07 000000512 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:19.984 -07 000000611 INF: FPGA: Recv ZPIEZORD 32807
17-03-18 03:34:19.994 -07 000000512 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:34:19.994 -07 000000512 INF: Z Motor: Piezo is near 50.1 V (nominally 0 to 100 V), expect near 58.6 V, since DAC is at 5.863 V. Piezo Error = -8.5 V.
17-03-18 03:34:19.994 -07 000000512 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.9 um, Read 10 ADC samples: Avg = 36671 (-175.0 uncal um), Error = 0.9 uncal um, Median = 36671 (-175.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 36667 (-175.0 uncal um), Max = 36675 (-175.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:34:19.994 -07 000000512 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36671, posNoise = 4, negNoise = 4
17-03-18 03:34:19.994 -07 000000512 INF: Z Motor: After move to -0.175898, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:19.994 -07 000000512 INF: Z Motor: Settle wait time = 1465 ms, measure time = 107 ms (allowed 150 ms), total time = 1572 ms
17-03-18 03:34:19.994 -07 000000512 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:20.044 -07 000000512 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1626 ms
17-03-18 03:34:20.044 -07 000000512 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:20.044 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:20.044 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:20.044 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:20.044 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:20.044 -07 000000438 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:34:20.044 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:20.044 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:20.044 -07 000000438 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:34:20.054 -07 000000438 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:34:20.054 -07 000000438 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:34:20.064 -07 000000438 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:34:20.064 -07 000000438 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 03:34:20.064 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:34:20.114 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:34:20.414 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:34:20.414 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:34:20.414 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:34:20.414 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610472208, 0x0, 559484976) start.
17-03-18 03:34:20.454 -07 000000611 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:34:20.454 -07 000000591 INF: FPGA: Recv CAMSNAP
17-03-18 03:34:20.454 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 383 ms to get response, and 386 ms overall
17-03-18 03:34:20.534 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610472208, 0x0, 559484976) end. Duration was 116 ms.
17-03-18 03:34:20.534 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:20.534 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:34:20.534 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-18 03:34:20.554 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:34:20.554 -07 000000579 INF: Autofocus start
17-03-18 03:34:20.554 -07 000000579 INF: MeasureProfile start
17-03-18 03:34:20.554 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:34:20.564 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:34:20.564 -07 000000444 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:34:20.564 -07 000000579 INF: MeasureProfile done
17-03-18 03:34:20.564 -07 000000579 INF: X=48  Z correction [um]=0.1739867
17-03-18 03:34:20.564 -07 000000579 INF: Autofocus finished
17-03-18 03:34:20.764 -07 000000579 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:34:20.764 -07 000000444 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-18 03:34:20.764 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53857421875, Z-position -0.175905635461651. ----------
17-03-18 03:34:20.764 -07 000000610 INF: Cycle	114	Tile	9	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:20.774 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36976, sync = True, waitForSettling = True)
17-03-18 03:34:20.774 -07 000000610 INF: Z Motor: Moving to -0.169265 mm, started at -0.175906 mm, distance = 6.64 um
17-03-18 03:34:20.774 -07 000000610 INF: FPGA: Xmit ZDACW 36976\n [Z Motor]
17-03-18 03:34:20.774 -07 000000592 INF: FPGA: Recv ZDACW
17-03-18 03:34:20.784 -07 000000610 INF: FPGA: 'ZDACW 36976' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:34:20.784 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:20.784 -07 000000611 INF: FPGA: Recv ZDACR 36976
17-03-18 03:34:20.794 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:20.794 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:20.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:20.944 -07 000000591 INF: FPGA: Recv ZSGSRD 35641
17-03-18 03:34:20.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:20.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:20.954 -07 000000501 INF: FPGA: Recv ZSGSRD 35639
17-03-18 03:34:20.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:20.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:20.964 -07 000000424 INF: FPGA: Recv ZSGSRD 35635
17-03-18 03:34:20.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:20.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:20.974 -07 000000512 INF: FPGA: Recv ZSGSRD 35637
17-03-18 03:34:20.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:20.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:20.984 -07 000000611 INF: FPGA: Recv ZSGSRD 35644
17-03-18 03:34:20.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:20.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:20.994 -07 000000569 INF: FPGA: Recv ZSGSRD 35637
17-03-18 03:34:21.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:21.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:21.004 -07 000000502 INF: FPGA: Recv ZSGSRD 35639
17-03-18 03:34:21.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:21.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:21.014 -07 000000512 INF: FPGA: Recv ZSGSRD 35640
17-03-18 03:34:21.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:21.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:21.034 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.011254,
17-03-18 03:34:21.034 -07 000000444 INF: FPGA: Recv ZSGSRD 35639
17-03-18 03:34:21.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:34:21.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:21.064 -07 000000579 INF: FPGA: Recv ZSGSRD 35637
17-03-18 03:34:21.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:21.084 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:21.084 -07 000000569 INF: FPGA: Recv ZPIEZORD 31434
17-03-18 03:34:21.094 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:34:21.094 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.642 V. Piezo Error = -9.3 V.
17-03-18 03:34:21.094 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35639 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35639 (-168.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35635 (-168.4 uncal um), Max = 35644 (-168.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:34:21.094 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35639, posNoise = 5, negNoise = 4
17-03-18 03:34:21.094 -07 000000610 INF: Z Motor: After move to -0.169265, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:21.094 -07 000000610 INF: Z Motor: MoveAbsStepped took 318 ms)
17-03-18 03:34:21.094 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:21.094 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:21.094 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:21.094 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:21.094 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:21.094 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:21.094 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:21.094 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:21.094 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:34:21.094 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:21.094 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:34:21.094 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:34:21.094 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:21.094 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:21.104 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:34:21.104 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:21.104 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:34:21.104 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:34:21.114 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:34:21.114 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:34:21.114 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37152 150\n [Camera]
17-03-18 03:34:21.314 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:21.584 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:21.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:21.724 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:21.724 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:21.724 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:21.724 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:21.724 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:34:21.724 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:21.724 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:21.724 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:21.724 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:21.724 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:34:21.914 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37152 792
17-03-18 03:34:22.064 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 944
17-03-18 03:34:22.094 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:34:22.104 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:34:22.104 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:22.104 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:34:22.104 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:34:22.104 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:22.104 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:22.104 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:22.104 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:34:22.114 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:34:22.264 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:22.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:22.264 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:22.264 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:22.264 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:22.264 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:22.264 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:22.264 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:34:22.274 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:22.274 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:34:22.454 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:22.454 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:22.454 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37152 150' command took 2 ms to send, 1333 ms to get response, and 1338 ms overall
17-03-18 03:34:22.454 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.170105
17-03-18 03:34:22.454 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17011 mm
17-03-18 03:34:22.454 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:22.454 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:34:22.454 -07 000000424 INF: Y Motor: Moving to 67.3826 mm, started at 66.5386 mm, delta = 0.8440 mm
17-03-18 03:34:22.454 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:22.454 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 37159, sync = True, waitForSettling = False)
17-03-18 03:34:22.454 -07 000000438 INF: Z Motor: Moving to -0.170103 mm, started at -0.169276 mm, distance = -0.83 um
17-03-18 03:34:22.464 -07 000000438 INF: FPGA: Xmit ZDACW 37159\n [Z Motor]
17-03-18 03:34:22.464 -07 000000501 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:34:22.464 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:34:22.464 -07 000000424 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:22.464 -07 000000424 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:22.464 -07 000000424 INF: Y Motor: Moving 1350 steps-30
17-03-18 03:34:22.464 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:34:22.474 -07 000000438 INF: FPGA: 'ZDACW 37159' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:34:22.474 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:22.474 -07 000000501 INF: FPGA: Recv ZDACR 37159
17-03-18 03:34:22.484 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:22.484 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:22.484 -07 000000438 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:34:22.654 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:34:22.654 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:34:22.654 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:22.654 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:34:22.654 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:34:22.654 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:22.664 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:22.664 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:34:22.664 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:22.674 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 03:34:22.854 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:34:22.854 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall
17-03-18 03:34:22.904 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:22.904 -07 000000579 INF: FPGA: Recv YRDPOS 137976
17-03-18 03:34:22.914 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:22.914 -07 000000424 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:22.914 -07 000000424 INF: Y Motor: Position error before settling (table move) = -24 encoder counts (-0.012 mm)
17-03-18 03:34:22.914 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.844 mm, average velocity = 2.131 mm/sec
17-03-18 03:34:23.864 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:23.864 -07 000000592 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:34:23.874 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:23.874 -07 000000424 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:23.894 -07 000000424 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:23.894 -07 000000424 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:34:23.894 -07 000000424 INF: Y Motor: Moved to 67.3716 after 1441 ms (table move)
17-03-18 03:34:23.904 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170103 mm (DAC = 37159)
17-03-18 03:34:23.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:23.904 -07 000000501 INF: FPGA: Recv ZSGSRD 35778
17-03-18 03:34:23.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:34:23.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:23.914 -07 000000579 INF: FPGA: Recv ZSGSRD 35771
17-03-18 03:34:23.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:23.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:23.924 -07 000000592 INF: FPGA: Recv ZSGSRD 35774
17-03-18 03:34:23.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:23.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:23.934 -07 000000444 INF: FPGA: Recv ZSGSRD 35769
17-03-18 03:34:23.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:23.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:23.944 -07 000000590 INF: FPGA: Recv ZSGSRD 35766
17-03-18 03:34:23.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:23.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:23.954 -07 000000444 INF: FPGA: Recv ZSGSRD 35764
17-03-18 03:34:23.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:23.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:23.964 -07 000000501 INF: FPGA: Recv ZSGSRD 35769
17-03-18 03:34:23.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:23.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:23.974 -07 000000438 INF: FPGA: Recv ZSGSRD 35768
17-03-18 03:34:23.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:23.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:23.984 -07 000000501 INF: FPGA: Recv ZSGSRD 35769
17-03-18 03:34:23.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:23.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:23.994 -07 000000438 INF: FPGA: Recv ZSGSRD 35779
17-03-18 03:34:24.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.004 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:24.004 -07 000000502 INF: FPGA: Recv ZPIEZORD 31650
17-03-18 03:34:24.014 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.014 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.670 V. Piezo Error = -9.1 V.
17-03-18 03:34:24.014 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.1 um, Read 10 ADC samples: Avg = 35771 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35769 (-169.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35764 (-169.2 uncal um), Max = 35779 (-169.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:34:24.014 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35771, posNoise = 8, negNoise = 7
17-03-18 03:34:24.014 -07 000000610 INF: Z Motor: After move to -0.170103, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:24.014 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 107 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:34:24.014 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:24.064 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 03:34:24.064 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:24.064 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.170123844534066. ----------
17-03-18 03:34:24.064 -07 000000610 INF: Cycle	114	Tile	10	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:24.064 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36983, sync = True, waitForSettling = True)
17-03-18 03:34:24.064 -07 000000610 INF: Z Motor: Moving to -0.169297 mm, started at -0.170124 mm, distance = 0.83 um
17-03-18 03:34:24.064 -07 000000610 INF: FPGA: Xmit ZDACW 36983\n [Z Motor]
17-03-18 03:34:24.064 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:34:24.074 -07 000000610 INF: FPGA: 'ZDACW 36983' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:24.074 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:24.074 -07 000000592 INF: FPGA: Recv ZDACR 36983
17-03-18 03:34:24.084 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.084 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:24.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:24.234 -07 000000502 INF: FPGA: Recv ZSGSRD 35641
17-03-18 03:34:24.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:24.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:24.244 -07 000000606 INF: FPGA: Recv ZSGSRD 35647
17-03-18 03:34:24.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:24.254 -07 000000590 INF: FPGA: Recv ZSGSRD 35650
17-03-18 03:34:24.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:24.264 -07 000000592 INF: FPGA: Recv ZSGSRD 35642
17-03-18 03:34:24.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:24.274 -07 000000590 INF: FPGA: Recv ZSGSRD 35642
17-03-18 03:34:24.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:24.284 -07 000000606 INF: FPGA: Recv ZSGSRD 35643
17-03-18 03:34:24.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:24.294 -07 000000590 INF: FPGA: Recv ZSGSRD 35644
17-03-18 03:34:24.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:24.304 -07 000000501 INF: FPGA: Recv ZSGSRD 35645
17-03-18 03:34:24.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:24.314 -07 000000444 INF: FPGA: Recv ZSGSRD 35646
17-03-18 03:34:24.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:24.324 -07 000000424 INF: FPGA: Recv ZSGSRD 35644
17-03-18 03:34:24.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.334 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:24.334 -07 000000444 INF: FPGA: Recv ZPIEZORD 31462
17-03-18 03:34:24.344 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:24.344 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.643 V. Piezo Error = -9.2 V.
17-03-18 03:34:24.344 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35644 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35644 (-168.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35641 (-168.4 uncal um), Max = 35650 (-168.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:34:24.344 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35644, posNoise = 6, negNoise = 3
17-03-18 03:34:24.344 -07 000000610 INF: Z Motor: After move to -0.169297, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:24.344 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:34:24.344 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:24.344 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:24.344 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:24.344 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:24.344 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:24.344 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:24.344 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:24.344 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:24.344 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:24.344 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:24.344 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:24.344 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:24.344 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:34:24.354 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:34:24.354 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:24.354 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:24.364 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:34:24.364 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:34:24.364 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:34:24.364 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:34:24.364 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37159 150\n [Camera]
17-03-18 03:34:24.564 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:24.974 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:24.974 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:24.974 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:24.974 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:24.974 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:34:24.974 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:24.974 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:24.974 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:24.974 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:24.974 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:34:25.164 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37159 792
17-03-18 03:34:25.314 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:25.354 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:34:25.354 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:34:25.354 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:25.354 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:34:25.354 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:34:25.354 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:25.354 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:25.354 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:25.354 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:34:25.364 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:34:25.504 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:25.504 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:25.504 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:25.504 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:25.504 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1094749800, 0x0, 391868352) start.
17-03-18 03:34:25.514 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:25.514 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:25.514 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:25.634 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:25.634 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:34:25.704 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1330
17-03-18 03:34:25.704 -07 000000592 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:25.704 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37159 150' command took 2 ms to send, 1330 ms to get response, and 1337 ms overall
17-03-18 03:34:25.704 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.169597
17-03-18 03:34:25.704 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16960 mm
17-03-18 03:34:25.704 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:25.704 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:34:25.704 -07 000000502 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-18 03:34:25.704 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:25.704 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 37049, sync = True, waitForSettling = False)
17-03-18 03:34:25.704 -07 000000424 INF: Z Motor: Moving to -0.169599 mm, started at -0.169308 mm, distance = -0.29 um
17-03-18 03:34:25.704 -07 000000592 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:34:25.714 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:25.714 -07 000000424 INF: FPGA: Xmit ZDACW 37049\n [Z Motor]
17-03-18 03:34:25.714 -07 000000502 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:25.714 -07 000000502 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:25.714 -07 000000502 INF: Y Motor: Moving 1346 steps-24
17-03-18 03:34:25.714 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:34:25.724 -07 000000424 INF: FPGA: 'ZDACW 37049' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:34:25.724 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:25.734 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:25.734 -07 000000590 INF: FPGA: Recv ZDACR 37049
17-03-18 03:34:25.744 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:34:25.744 -07 000000424 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-18 03:34:25.894 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1094749800, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:34:25.894 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:34:25.894 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:25.894 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:25.894 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:34:26.014 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:34:26.014 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:34:26.014 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:26.014 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:26.024 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 509 ms.
17-03-18 03:34:26.094 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:34:26.094 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:34:26.144 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:26.154 -07 000000424 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:34:26.154 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:26.154 -07 000000502 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:26.154 -07 000000502 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 03:34:26.154 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.841 mm, average velocity = 2.162 mm/sec
17-03-18 03:34:26.434 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.993549,
17-03-18 03:34:26.584 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:26.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:27.104 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:27.104 -07 000000501 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:34:27.114 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:27.114 -07 000000502 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:27.134 -07 000000502 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:27.134 -07 000000502 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:34:27.134 -07 000000502 INF: Y Motor: Moved to 68.2046 after 1433 ms (table move)
17-03-18 03:34:27.144 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169599 mm (DAC = 37049)
17-03-18 03:34:27.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.144 -07 000000592 INF: FPGA: Recv ZSGSRD 35681
17-03-18 03:34:27.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:34:27.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.154 -07 000000606 INF: FPGA: Recv ZSGSRD 35691
17-03-18 03:34:27.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.164 -07 000000590 INF: FPGA: Recv ZSGSRD 35694
17-03-18 03:34:27.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.174 -07 000000592 INF: FPGA: Recv ZSGSRD 35689
17-03-18 03:34:27.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.184 -07 000000444 INF: FPGA: Recv ZSGSRD 35684
17-03-18 03:34:27.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.194 -07 000000592 INF: FPGA: Recv ZSGSRD 35690
17-03-18 03:34:27.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.204 -07 000000444 INF: FPGA: Recv ZSGSRD 35689
17-03-18 03:34:27.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.214 -07 000000438 INF: FPGA: Recv ZSGSRD 35690
17-03-18 03:34:27.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.224 -07 000000579 INF: FPGA: Recv ZSGSRD 35693
17-03-18 03:34:27.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.234 -07 000000606 INF: FPGA: Recv ZSGSRD 35693
17-03-18 03:34:27.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.244 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:27.244 -07 000000501 INF: FPGA: Recv ZPIEZORD 31540
17-03-18 03:34:27.254 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.254 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.653 V. Piezo Error = -9.2 V.
17-03-18 03:34:27.254 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.6 um, Read 10 ADC samples: Avg = 35689 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35690 (-168.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35681 (-168.7 uncal um), Max = 35694 (-168.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:34:27.254 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35689, posNoise = 5, negNoise = 8
17-03-18 03:34:27.254 -07 000000610 INF: Z Motor: After move to -0.169599, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:27.254 -07 000000610 INF: Z Motor: Settle wait time = 1436 ms, measure time = 108 ms (allowed 150 ms), total time = 1544 ms
17-03-18 03:34:27.254 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:27.304 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms
17-03-18 03:34:27.304 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:27.304 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.169597059138442. ----------
17-03-18 03:34:27.304 -07 000000610 INF: Cycle	114	Tile	11	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:27.304 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36872, sync = True, waitForSettling = True)
17-03-18 03:34:27.304 -07 000000610 INF: Z Motor: Moving to -0.168789 mm, started at -0.169597 mm, distance = 0.81 um
17-03-18 03:34:27.304 -07 000000610 INF: FPGA: Xmit ZDACW 36872\n [Z Motor]
17-03-18 03:34:27.304 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:34:27.314 -07 000000610 INF: FPGA: 'ZDACW 36872' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:27.314 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:27.314 -07 000000590 INF: FPGA: Recv ZDACR 36872
17-03-18 03:34:27.324 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.324 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:27.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.474 -07 000000501 INF: FPGA: Recv ZSGSRD 35566
17-03-18 03:34:27.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:27.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.484 -07 000000501 INF: FPGA: Recv ZSGSRD 35567
17-03-18 03:34:27.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.494 -07 000000579 INF: FPGA: Recv ZSGSRD 35563
17-03-18 03:34:27.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.504 -07 000000501 INF: FPGA: Recv ZSGSRD 35569
17-03-18 03:34:27.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.514 -07 000000424 INF: FPGA: Recv ZSGSRD 35557
17-03-18 03:34:27.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.524 -07 000000502 INF: FPGA: Recv ZSGSRD 35571
17-03-18 03:34:27.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.534 -07 000000592 INF: FPGA: Recv ZSGSRD 35564
17-03-18 03:34:27.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.544 -07 000000438 INF: FPGA: Recv ZSGSRD 35559
17-03-18 03:34:27.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.554 -07 000000579 INF: FPGA: Recv ZSGSRD 35570
17-03-18 03:34:27.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:27.564 -07 000000606 INF: FPGA: Recv ZSGSRD 35566
17-03-18 03:34:27.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.574 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:27.574 -07 000000579 INF: FPGA: Recv ZPIEZORD 31349
17-03-18 03:34:27.584 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:27.584 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.626 V. Piezo Error = -9.3 V.
17-03-18 03:34:27.584 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.8 um, Read 10 ADC samples: Avg = 35565 (-167.9 uncal um), Error = 0.9 uncal um, Median = 35566 (-167.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35557 (-167.9 uncal um), Max = 35571 (-168.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:34:27.584 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35565, posNoise = 6, negNoise = 8
17-03-18 03:34:27.584 -07 000000610 INF: Z Motor: After move to -0.168789, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:27.584 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:34:27.584 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:27.584 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:27.584 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:27.584 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:27.584 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:27.584 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:27.584 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:27.584 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:27.584 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:27.584 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:27.584 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:27.584 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:27.594 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:34:27.594 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:27.594 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:34:27.594 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:27.604 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:34:27.604 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:34:27.604 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms.
17-03-18 03:34:27.604 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:34:27.614 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37049 150\n [Camera]
17-03-18 03:34:27.814 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:28.214 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:28.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:28.214 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:28.224 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:28.224 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:28.224 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:28.224 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:28.224 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:34:28.224 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:28.224 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:34:28.414 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37049 792
17-03-18 03:34:28.564 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:28.624 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 401 ms.
17-03-18 03:34:28.624 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 03:34:28.624 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:28.624 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:28.624 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms.
17-03-18 03:34:28.634 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 407 ms.
17-03-18 03:34:28.634 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-18 03:34:28.634 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:28.634 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:28.644 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 418 ms.
17-03-18 03:34:28.754 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:28.754 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:28.754 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:28.754 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:28.754 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:34:28.754 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:28.754 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:28.764 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:28.764 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:28.764 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:34:28.944 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:28.944 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:28.944 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37049 150' command took 2 ms to send, 1328 ms to get response, and 1337 ms overall
17-03-18 03:34:28.954 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.169446
17-03-18 03:34:28.954 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.16945 mm
17-03-18 03:34:28.954 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:28.954 -07 000000592 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:34:28.954 -07 000000592 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm
17-03-18 03:34:28.954 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:28.954 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 37015, sync = True, waitForSettling = False)
17-03-18 03:34:28.954 -07 000000501 INF: Z Motor: Moving to -0.169444 mm, started at -0.168800 mm, distance = -0.64 um
17-03-18 03:34:28.954 -07 000000444 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:34:28.964 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:28.964 -07 000000592 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:28.964 -07 000000592 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:28.964 -07 000000592 INF: Y Motor: Moving 1341 steps-16
17-03-18 03:34:28.964 -07 000000501 INF: FPGA: Xmit ZDACW 37015\n [Z Motor]
17-03-18 03:34:28.964 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:34:28.974 -07 000000501 INF: FPGA: 'ZDACW 37015' command took 1 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:34:28.974 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:28.974 -07 000000579 INF: FPGA: Recv ZDACR 37015
17-03-18 03:34:28.984 -07 000000592 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:28.984 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:28.984 -07 000000501 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 03:34:29.144 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:34:29.144 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:34:29.144 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:34:29.144 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:34:29.144 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:29.144 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:29.144 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:29.144 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:34:29.144 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:29.154 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:34:29.354 -07 000000438 INF: FPGA: Recv YMVTILE
17-03-18 03:34:29.354 -07 000000592 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:34:29.404 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:29.414 -07 000000424 INF: FPGA: Recv YRDPOS 141366
17-03-18 03:34:29.414 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:29.414 -07 000000592 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:29.414 -07 000000592 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 03:34:29.414 -07 000000592 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.838 mm, average velocity = 2.106 mm/sec
17-03-18 03:34:30.364 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:30.364 -07 000000502 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:34:30.374 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:30.374 -07 000000592 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:30.404 -07 000000592 INF: Y Motor: After move to 69.042610, error = -0.015755, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:30.404 -07 000000592 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:34:30.404 -07 000000592 INF: Y Motor: Moved to 69.0269 after 1445 ms (table move)
17-03-18 03:34:30.404 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169444 mm (DAC = 37015)
17-03-18 03:34:30.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.404 -07 000000444 INF: FPGA: Recv ZSGSRD 35667
17-03-18 03:34:30.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:34:30.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.414 -07 000000606 INF: FPGA: Recv ZSGSRD 35667
17-03-18 03:34:30.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.424 -07 000000438 INF: FPGA: Recv ZSGSRD 35670
17-03-18 03:34:30.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.434 -07 000000579 INF: FPGA: Recv ZSGSRD 35668
17-03-18 03:34:30.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.444 -07 000000606 INF: FPGA: Recv ZSGSRD 35664
17-03-18 03:34:30.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.454 -07 000000592 INF: FPGA: Recv ZSGSRD 35662
17-03-18 03:34:30.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.464 -07 000000606 INF: FPGA: Recv ZSGSRD 35660
17-03-18 03:34:30.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.474 -07 000000579 INF: FPGA: Recv ZSGSRD 35666
17-03-18 03:34:30.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.484 -07 000000579 INF: FPGA: Recv ZSGSRD 35665
17-03-18 03:34:30.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.494 -07 000000424 INF: FPGA: Recv ZSGSRD 35666
17-03-18 03:34:30.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.504 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:30.504 -07 000000502 INF: FPGA: Recv ZPIEZORD 31535
17-03-18 03:34:30.514 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.514 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.648 V. Piezo Error = -9.1 V.
17-03-18 03:34:30.514 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.4 um, Read 10 ADC samples: Avg = 35666 (-168.6 uncal um), Error = 0.9 uncal um, Median = 35666 (-168.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35660 (-168.5 uncal um), Max = 35670 (-168.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:34:30.514 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35666, posNoise = 4, negNoise = 6
17-03-18 03:34:30.514 -07 000000610 INF: Z Motor: After move to -0.169444, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:30.514 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 107 ms (allowed 150 ms), total time = 1554 ms
17-03-18 03:34:30.514 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:30.564 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms
17-03-18 03:34:30.564 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:30.564 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02685546875, Z-position -0.169449302259181. ----------
17-03-18 03:34:30.564 -07 000000610 INF: Cycle	114	Tile	12	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:30.564 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36839, sync = True, waitForSettling = True)
17-03-18 03:34:30.564 -07 000000610 INF: Z Motor: Moving to -0.168638 mm, started at -0.169449 mm, distance = 0.81 um
17-03-18 03:34:30.564 -07 000000610 INF: FPGA: Xmit ZDACW 36839\n [Z Motor]
17-03-18 03:34:30.564 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:34:30.574 -07 000000610 INF: FPGA: 'ZDACW 36839' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:30.574 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:30.574 -07 000000438 INF: FPGA: Recv ZDACR 36839
17-03-18 03:34:30.584 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.584 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:30.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.734 -07 000000579 INF: FPGA: Recv ZSGSRD 35538
17-03-18 03:34:30.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:30.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.744 -07 000000502 INF: FPGA: Recv ZSGSRD 35542
17-03-18 03:34:30.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.754 -07 000000501 INF: FPGA: Recv ZSGSRD 35542
17-03-18 03:34:30.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.764 -07 000000438 INF: FPGA: Recv ZSGSRD 35539
17-03-18 03:34:30.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.774 -07 000000606 INF: FPGA: Recv ZSGSRD 35541
17-03-18 03:34:30.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.784 -07 000000444 INF: FPGA: Recv ZSGSRD 35542
17-03-18 03:34:30.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.794 -07 000000592 INF: FPGA: Recv ZSGSRD 35541
17-03-18 03:34:30.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.804 -07 000000424 INF: FPGA: Recv ZSGSRD 35547
17-03-18 03:34:30.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.814 -07 000000438 INF: FPGA: Recv ZSGSRD 35544
17-03-18 03:34:30.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:30.824 -07 000000444 INF: FPGA: Recv ZSGSRD 35546
17-03-18 03:34:30.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.834 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:30.834 -07 000000606 INF: FPGA: Recv ZPIEZORD 31329
17-03-18 03:34:30.844 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:30.844 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.621 V. Piezo Error = -9.3 V.
17-03-18 03:34:30.844 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35542 (-167.8 uncal um), Error = 0.9 uncal um, Median = 35542 (-167.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35538 (-167.8 uncal um), Max = 35547 (-167.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:34:30.844 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35542, posNoise = 5, negNoise = 4
17-03-18 03:34:30.844 -07 000000610 INF: Z Motor: After move to -0.168638, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:30.844 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 03:34:30.844 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:30.844 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:30.844 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:30.844 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:30.844 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:30.844 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:30.844 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:30.844 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:30.844 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:30.844 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:30.844 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:34:30.844 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:30.854 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:34:30.854 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:30.854 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:34:30.854 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:30.864 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:34:30.864 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:34:30.864 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:34:30.864 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:34:30.874 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 37015 150\n [Camera]
17-03-18 03:34:31.064 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:31.484 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 602
17-03-18 03:34:31.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 602
17-03-18 03:34:31.484 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:31.484 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:31.484 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) start.
17-03-18 03:34:31.484 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 602
17-03-18 03:34:31.484 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 602
17-03-18 03:34:31.484 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:31.484 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:31.484 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:34:31.584 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:31.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:31.674 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37015 792
17-03-18 03:34:31.794 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.986717,
17-03-18 03:34:31.814 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:31.864 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:34:31.864 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:34:31.864 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:31.864 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:34:31.864 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:34:31.864 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:31.864 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:31.864 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:31.864 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:34:31.874 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:34:32.014 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:32.014 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:32.014 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:32.014 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:32.014 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:34:32.014 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:32.014 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:32.024 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:32.024 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:32.024 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:34:32.204 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:32.204 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:32.204 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 37015 150' command took 2 ms to send, 1328 ms to get response, and 1337 ms overall
17-03-18 03:34:32.214 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:34:32.214 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 13 at Y-position 69.02685546875, Z-Position -0.168652699953603. ------
17-03-18 03:34:32.214 -07 000000444 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.17497 mm
17-03-18 03:34:32.214 -07 000000444 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:32.214 -07 000000592 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:34:32.214 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:34:32.214 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 38223, sync = True, waitForSettling = False)
17-03-18 03:34:32.214 -07 000000502 INF: Z Motor: Moving to -0.174974 mm, started at -0.168653 mm, distance = -6.32 um
17-03-18 03:34:32.214 -07 000000606 INF: Y Motor: Moving to 69.8726 mm, started at 69.0269 mm, delta = 0.8458 mm
17-03-18 03:34:32.214 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:34:32.224 -07 000000592 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:32.224 -07 000000502 INF: FPGA: Xmit ZDACW 38223\n [Z Motor]
17-03-18 03:34:32.224 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:34:32.234 -07 000000502 INF: FPGA: 'ZDACW 38223' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:32.234 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:32.234 -07 000000611 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:34:32.244 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 03:34:32.244 -07 000000606 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:32.244 -07 000000606 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:32.244 -07 000000606 INF: Y Motor: Moving 1353 steps-33
17-03-18 03:34:32.244 -07 000000592 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:34:32.254 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:32.254 -07 000000438 INF: FPGA: Recv ZDACR 38223
17-03-18 03:34:32.264 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:32.264 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:32.264 -07 000000502 INF: Z Motor: MoveAbsStepped took 41 ms (did NOT wait for settling yet))
17-03-18 03:34:32.404 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:34:32.404 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:34:32.404 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:32.404 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:34:32.404 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:34:32.404 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:32.404 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:32.404 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:34:32.404 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:32.414 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:34:32.444 -07 000000569 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:34:32.444 -07 000000592 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 223 ms overall
17-03-18 03:34:32.634 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:34:32.634 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:34:32.684 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:32.684 -07 000000591 INF: FPGA: Recv YRDPOS 143078
17-03-18 03:34:32.694 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:32.694 -07 000000606 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:32.694 -07 000000606 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 03:34:32.694 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.846 mm, average velocity = 2.125 mm/sec
17-03-18 03:34:33.644 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:33.644 -07 000000579 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:34:33.654 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:33.654 -07 000000606 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:33.684 -07 000000606 INF: Y Motor: After move to 69.872612, error = -0.009819, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:33.684 -07 000000606 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:34:33.684 -07 000000606 INF: Y Motor: Moved to 69.8628 after 1461 ms (table move)
17-03-18 03:34:33.684 -07 000000444 INF: Z Motor: EndOfMoveAbsStepped: target = -0.174974 mm (DAC = 38223)
17-03-18 03:34:33.684 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:33.684 -07 000000501 INF: FPGA: Recv ZSGSRD 36532
17-03-18 03:34:33.694 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:34:33.694 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:33.694 -07 000000569 INF: FPGA: Recv ZSGSRD 36526
17-03-18 03:34:33.704 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:33.704 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:33.704 -07 000000502 INF: FPGA: Recv ZSGSRD 36529
17-03-18 03:34:33.714 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:33.714 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:33.714 -07 000000430 INF: FPGA: Recv ZSGSRD 36532
17-03-18 03:34:33.724 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:33.724 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:33.724 -07 000000501 INF: FPGA: Recv ZSGSRD 36525
17-03-18 03:34:33.734 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:33.734 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:33.734 -07 000000606 INF: FPGA: Recv ZSGSRD 36528
17-03-18 03:34:33.744 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:33.744 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:33.744 -07 000000501 INF: FPGA: Recv ZSGSRD 36521
17-03-18 03:34:33.754 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:33.754 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:33.754 -07 000000591 INF: FPGA: Recv ZSGSRD 36526
17-03-18 03:34:33.764 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:33.764 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:33.764 -07 000000606 INF: FPGA: Recv ZSGSRD 36527
17-03-18 03:34:33.774 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:33.774 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:33.774 -07 000000579 INF: FPGA: Recv ZSGSRD 36522
17-03-18 03:34:33.784 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:33.784 -07 000000444 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:33.784 -07 000000606 INF: FPGA: Recv ZPIEZORD 32652
17-03-18 03:34:33.794 -07 000000444 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:33.794 -07 000000444 INF: Z Motor: Piezo is near 49.8 V (nominally 0 to 100 V), expect near 58.3 V, since DAC is at 5.832 V. Piezo Error = -8.6 V.
17-03-18 03:34:33.794 -07 000000444 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.0 um, Read 10 ADC samples: Avg = 36527 (-174.1 uncal um), Error = 0.9 uncal um, Median = 36526 (-174.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36521 (-174.1 uncal um), Max = 36532 (-174.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:34:33.794 -07 000000444 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36527, posNoise = 5, negNoise = 6
17-03-18 03:34:33.794 -07 000000444 INF: Z Motor: After move to -0.174974, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:33.794 -07 000000444 INF: Z Motor: Settle wait time = 1465 ms, measure time = 106 ms (allowed 150 ms), total time = 1571 ms
17-03-18 03:34:33.794 -07 000000444 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:33.844 -07 000000444 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1623 ms
17-03-18 03:34:33.844 -07 000000444 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:33.844 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:33.844 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:33.844 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:33.844 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:33.844 -07 000000569 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:34:33.844 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:33.844 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:33.844 -07 000000569 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:34:33.854 -07 000000569 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:34:33.854 -07 000000569 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:34:33.864 -07 000000569 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms.
17-03-18 03:34:33.864 -07 000000569 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-18 03:34:33.864 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:34:33.914 -07 000000606 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:34:34.204 -07 000000579 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:34:34.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:34:34.214 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:34:34.334 -07 000000501 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:34:34.354 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610603336, 0x0, 559484976) start.
17-03-18 03:34:34.354 -07 000000501 INF: FPGA: Recv CAMSNAP
17-03-18 03:34:34.354 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 481 ms to get response, and 488 ms overall
17-03-18 03:34:34.474 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610603336, 0x0, 559484976) end. Duration was 145 ms.
17-03-18 03:34:34.474 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:34.474 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:34:34.474 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 267 ms.
17-03-18 03:34:34.554 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:34:34.554 -07 000000591 INF: Autofocus start
17-03-18 03:34:34.554 -07 000000591 INF: MeasureProfile start
17-03-18 03:34:34.554 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:34:34.564 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:34:34.564 -07 000000606 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:34:34.564 -07 000000591 INF: MeasureProfile done
17-03-18 03:34:34.564 -07 000000591 INF: X=-80  Z correction [um]=-0.4885566
17-03-18 03:34:34.564 -07 000000591 INF: Autofocus finished
17-03-18 03:34:34.764 -07 000000569 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:34:34.764 -07 000000606 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 205 ms overall
17-03-18 03:34:34.774 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86279296875, Z-position -0.174980548913237. ----------
17-03-18 03:34:34.774 -07 000000610 INF: Cycle	114	Tile	13	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:34.774 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36629, sync = True, waitForSettling = True)
17-03-18 03:34:34.774 -07 000000610 INF: Z Motor: Moving to -0.167677 mm, started at -0.174981 mm, distance = 7.30 um
17-03-18 03:34:34.774 -07 000000610 INF: FPGA: Xmit ZDACW 36629\n [Z Motor]
17-03-18 03:34:34.774 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:34:34.784 -07 000000610 INF: FPGA: 'ZDACW 36629' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:34.784 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:34.784 -07 000000502 INF: FPGA: Recv ZDACR 36629
17-03-18 03:34:34.794 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:34.794 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:34.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:34.944 -07 000000591 INF: FPGA: Recv ZSGSRD 35389
17-03-18 03:34:34.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:34.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:34.954 -07 000000430 INF: FPGA: Recv ZSGSRD 35394
17-03-18 03:34:34.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:34.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:34.964 -07 000000591 INF: FPGA: Recv ZSGSRD 35389
17-03-18 03:34:34.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:34.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:34.974 -07 000000579 INF: FPGA: Recv ZSGSRD 35386
17-03-18 03:34:34.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:34.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:34.984 -07 000000501 INF: FPGA: Recv ZSGSRD 35387
17-03-18 03:34:34.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:34.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:34.994 -07 000000444 INF: FPGA: Recv ZSGSRD 35394
17-03-18 03:34:35.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:35.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:35.004 -07 000000501 INF: FPGA: Recv ZSGSRD 35396
17-03-18 03:34:35.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:35.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:35.014 -07 000000579 INF: FPGA: Recv ZSGSRD 35393
17-03-18 03:34:35.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:35.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:35.024 -07 000000606 INF: FPGA: Recv ZSGSRD 35392
17-03-18 03:34:35.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:35.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:35.034 -07 000000502 INF: FPGA: Recv ZSGSRD 35395
17-03-18 03:34:35.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:35.044 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:35.044 -07 000000579 INF: FPGA: Recv ZPIEZORD 31146
17-03-18 03:34:35.054 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:35.054 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.589 V. Piezo Error = -9.4 V.
17-03-18 03:34:35.054 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.7 um, Read 10 ADC samples: Avg = 35392 (-166.8 uncal um), Error = 0.9 uncal um, Median = 35392 (-166.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35386 (-166.8 uncal um), Max = 35396 (-166.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:34:35.054 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35392, posNoise = 4, negNoise = 6
17-03-18 03:34:35.054 -07 000000610 INF: Z Motor: After move to -0.167677, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:35.054 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:34:35.054 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:35.054 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:35.054 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:35.054 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:35.054 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:35.054 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:35.054 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:35.054 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:35.054 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:34:35.054 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:35.054 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:35.054 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:35.064 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:34:35.064 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:35.064 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:34:35.064 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:35.074 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:34:35.074 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:34:35.074 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:34:35.074 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:34:35.074 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 36806 150\n [Camera]
17-03-18 03:34:35.274 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:35.684 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:35.684 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:35.684 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:35.684 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:35.684 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:35.684 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:35.684 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:35.684 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:34:35.684 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:35.684 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:34:35.874 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36806 792
17-03-18 03:34:36.024 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:36.074 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 393 ms.
17-03-18 03:34:36.074 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:34:36.074 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:36.084 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 395 ms.
17-03-18 03:34:36.084 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:34:36.084 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:36.084 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:36.084 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:34:36.084 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:36.094 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 03:34:36.214 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:36.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:36.214 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:36.224 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:36.224 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:34:36.224 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:36.224 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:36.224 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:36.224 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:36.224 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1094749800, 0x0, 418435064) start.
17-03-18 03:34:36.414 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1330
17-03-18 03:34:36.414 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:36.414 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 36806 150' command took 2 ms to send, 1330 ms to get response, and 1337 ms overall
17-03-18 03:34:36.414 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.167620
17-03-18 03:34:36.414 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16762 mm
17-03-18 03:34:36.414 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:36.414 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:34:36.534 -07 000000502 INF: Y Motor: Moving to 70.7026 mm, started at 69.8628 mm, delta = 0.8398 mm
17-03-18 03:34:36.534 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:36.534 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 36617, sync = True, waitForSettling = False)
17-03-18 03:34:36.534 -07 000000606 INF: Z Motor: Moving to -0.167622 mm, started at -0.167689 mm, distance = 0.07 um
17-03-18 03:34:36.534 -07 000000579 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:34:36.544 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:34:36.544 -07 000000502 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:36.544 -07 000000502 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:36.544 -07 000000502 INF: Y Motor: Moving 1344 steps-21
17-03-18 03:34:36.544 -07 000000606 INF: FPGA: Xmit ZDACW 36617\n [Z Motor]
17-03-18 03:34:36.544 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:34:36.554 -07 000000606 INF: FPGA: 'ZDACW 36617' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:34:36.554 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:36.554 -07 000000591 INF: FPGA: Recv ZDACR 36617
17-03-18 03:34:36.564 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:36.564 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:36.564 -07 000000606 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet))
17-03-18 03:34:36.584 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:36.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:36.604 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:34:36.604 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:34:36.604 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:36.604 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1094749800, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:34:36.604 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:34:36.604 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:36.604 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:36.604 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:34:36.604 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:36.614 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:34:36.934 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:34:36.934 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:34:36.984 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:36.984 -07 000000501 INF: FPGA: Recv YRDPOS 144768
17-03-18 03:34:36.994 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:36.994 -07 000000502 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:36.994 -07 000000502 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:34:36.994 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.840 mm, average velocity = 2.115 mm/sec
17-03-18 03:34:37.164 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.994908,
17-03-18 03:34:37.944 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:37.944 -07 000000579 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:34:37.954 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:37.954 -07 000000502 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:37.974 -07 000000502 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:37.974 -07 000000502 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:34:37.974 -07 000000502 INF: Y Motor: Moved to 70.6880 after 1448 ms (table move)
17-03-18 03:34:37.984 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167622 mm (DAC = 36617)
17-03-18 03:34:37.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:37.984 -07 000000590 INF: FPGA: Recv ZSGSRD 35377
17-03-18 03:34:37.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:34:37.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:37.994 -07 000000502 INF: FPGA: Recv ZSGSRD 35385
17-03-18 03:34:38.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.004 -07 000000590 INF: FPGA: Recv ZSGSRD 35382
17-03-18 03:34:38.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.014 -07 000000590 INF: FPGA: Recv ZSGSRD 35386
17-03-18 03:34:38.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.024 -07 000000502 INF: FPGA: Recv ZSGSRD 35380
17-03-18 03:34:38.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.034 -07 000000590 INF: FPGA: Recv ZSGSRD 35380
17-03-18 03:34:38.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.044 -07 000000502 INF: FPGA: Recv ZSGSRD 35376
17-03-18 03:34:38.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.054 -07 000000590 INF: FPGA: Recv ZSGSRD 35383
17-03-18 03:34:38.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.064 -07 000000590 INF: FPGA: Recv ZSGSRD 35390
17-03-18 03:34:38.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.074 -07 000000590 INF: FPGA: Recv ZSGSRD 35386
17-03-18 03:34:38.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.084 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:38.084 -07 000000591 INF: FPGA: Recv ZPIEZORD 31161
17-03-18 03:34:38.094 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:34:38.094 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.587 V. Piezo Error = -9.3 V.
17-03-18 03:34:38.094 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.6 um, Read 10 ADC samples: Avg = 35382 (-166.8 uncal um), Error = 0.9 uncal um, Median = 35382 (-166.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35376 (-166.7 uncal um), Max = 35390 (-166.8 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:34:38.094 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35382, posNoise = 8, negNoise = 6
17-03-18 03:34:38.094 -07 000000610 INF: Z Motor: After move to -0.167622, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:38.094 -07 000000610 INF: Z Motor: Settle wait time = 1450 ms, measure time = 108 ms (allowed 150 ms), total time = 1558 ms
17-03-18 03:34:38.094 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:38.144 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1727 ms
17-03-18 03:34:38.144 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:38.144 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.167624826010921. ----------
17-03-18 03:34:38.144 -07 000000610 INF: Cycle	114	Tile	14	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:38.144 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36440, sync = True, waitForSettling = True)
17-03-18 03:34:38.144 -07 000000610 INF: Z Motor: Moving to -0.166812 mm, started at -0.167625 mm, distance = 0.81 um
17-03-18 03:34:38.144 -07 000000610 INF: FPGA: Xmit ZDACW 36440\n [Z Motor]
17-03-18 03:34:38.144 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:34:38.154 -07 000000610 INF: FPGA: 'ZDACW 36440' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:38.154 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:38.154 -07 000000606 INF: FPGA: Recv ZDACR 36440
17-03-18 03:34:38.164 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.164 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:38.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.314 -07 000000430 INF: FPGA: Recv ZSGSRD 35256
17-03-18 03:34:38.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:38.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.324 -07 000000591 INF: FPGA: Recv ZSGSRD 35260
17-03-18 03:34:38.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.334 -07 000000579 INF: FPGA: Recv ZSGSRD 35253
17-03-18 03:34:38.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.344 -07 000000579 INF: FPGA: Recv ZSGSRD 35254
17-03-18 03:34:38.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.354 -07 000000579 INF: FPGA: Recv ZSGSRD 35253
17-03-18 03:34:38.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.364 -07 000000579 INF: FPGA: Recv ZSGSRD 35254
17-03-18 03:34:38.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.374 -07 000000569 INF: FPGA: Recv ZSGSRD 35254
17-03-18 03:34:38.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.384 -07 000000579 INF: FPGA: Recv ZSGSRD 35251
17-03-18 03:34:38.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.394 -07 000000569 INF: FPGA: Recv ZSGSRD 35260
17-03-18 03:34:38.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:38.404 -07 000000606 INF: FPGA: Recv ZSGSRD 35262
17-03-18 03:34:38.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.414 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:38.414 -07 000000430 INF: FPGA: Recv ZPIEZORD 31006
17-03-18 03:34:38.424 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:38.424 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.560 V. Piezo Error = -9.4 V.
17-03-18 03:34:38.424 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.8 um, Read 10 ADC samples: Avg = 35256 (-165.9 uncal um), Error = 0.9 uncal um, Median = 35254 (-165.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35251 (-165.9 uncal um), Max = 35262 (-166.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:34:38.424 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35256, posNoise = 6, negNoise = 5
17-03-18 03:34:38.424 -07 000000610 INF: Z Motor: After move to -0.166812, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:38.424 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:34:38.424 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:38.424 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:38.424 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:38.424 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:38.424 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:38.424 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:38.424 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:38.424 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:38.424 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:38.424 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:38.424 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:34:38.424 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:38.424 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:34:38.424 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:38.424 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:34:38.424 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:38.434 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:34:38.434 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:34:38.444 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 03:34:38.444 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:34:38.444 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 36617 150\n [Camera]
17-03-18 03:34:38.644 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:39.054 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:39.054 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:39.054 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:39.054 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:39.054 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:39.054 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:39.054 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:39.054 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:34:39.064 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:39.064 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:34:39.244 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36617 792
17-03-18 03:34:39.394 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:39.434 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:34:39.434 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:34:39.434 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:39.434 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:34:39.434 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:34:39.434 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:39.444 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:39.444 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:34:39.444 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:39.444 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:34:39.594 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:39.594 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:39.594 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:39.594 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:39.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:39.594 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:39.594 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:39.594 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:34:39.594 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:39.594 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:34:39.784 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:39.784 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:39.784 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 36617 150' command took 2 ms to send, 1332 ms to get response, and 1337 ms overall
17-03-18 03:34:39.784 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.167540
17-03-18 03:34:39.784 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16754 mm
17-03-18 03:34:39.784 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:39.784 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 36599, sync = True, waitForSettling = False)
17-03-18 03:34:39.784 -07 000000502 INF: Z Motor: Moving to -0.167539 mm, started at -0.166815 mm, distance = -0.72 um
17-03-18 03:34:39.784 -07 000000502 INF: FPGA: Xmit ZDACW 36599\n [Z Motor]
17-03-18 03:34:39.794 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:34:39.794 -07 000000444 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm
17-03-18 03:34:39.794 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:34:39.804 -07 000000502 INF: FPGA: 'ZDACW 36599' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:39.804 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:39.804 -07 000000590 INF: FPGA: Recv ZDACR 36599
17-03-18 03:34:39.814 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:39.814 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:39.814 -07 000000502 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 03:34:39.814 -07 000000579 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:34:39.824 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:39.824 -07 000000444 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:39.824 -07 000000444 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:39.824 -07 000000444 INF: Y Motor: Moving 1351 steps-31
17-03-18 03:34:39.824 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:39.964 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:34:39.964 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:34:39.964 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:39.974 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:39.974 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:34:39.974 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:34:39.974 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:39.974 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:39.974 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:34:39.984 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:34:40.194 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:34:40.194 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-18 03:34:40.254 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:40.254 -07 000000591 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:34:40.264 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:40.264 -07 000000444 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:40.264 -07 000000444 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:34:40.264 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.845 mm, average velocity = 2.234 mm/sec
17-03-18 03:34:41.214 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:41.214 -07 000000512 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:34:41.224 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:41.224 -07 000000444 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:41.244 -07 000000444 INF: Y Motor: After move to 71.532608, error = -0.014542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:41.244 -07 000000444 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:34:41.244 -07 000000444 INF: Y Motor: Moved to 71.5181 after 1459 ms (table move)
17-03-18 03:34:41.254 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167539 mm (DAC = 36599)
17-03-18 03:34:41.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.254 -07 000000591 INF: FPGA: Recv ZSGSRD 35372
17-03-18 03:34:41.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:34:41.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.264 -07 000000512 INF: FPGA: Recv ZSGSRD 35377
17-03-18 03:34:41.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.274 -07 000000591 INF: FPGA: Recv ZSGSRD 35368
17-03-18 03:34:41.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.284 -07 000000606 INF: FPGA: Recv ZSGSRD 35368
17-03-18 03:34:41.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.294 -07 000000502 INF: FPGA: Recv ZSGSRD 35362
17-03-18 03:34:41.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.304 -07 000000606 INF: FPGA: Recv ZSGSRD 35367
17-03-18 03:34:41.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.314 -07 000000579 INF: FPGA: Recv ZSGSRD 35368
17-03-18 03:34:41.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.324 -07 000000501 INF: FPGA: Recv ZSGSRD 35367
17-03-18 03:34:41.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.334 -07 000000444 INF: FPGA: Recv ZSGSRD 35375
17-03-18 03:34:41.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.344 -07 000000579 INF: FPGA: Recv ZSGSRD 35376
17-03-18 03:34:41.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.354 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:41.354 -07 000000512 INF: FPGA: Recv ZPIEZORD 31138
17-03-18 03:34:41.364 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.364 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.585 V. Piezo Error = -9.3 V.
17-03-18 03:34:41.364 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.5 um, Read 10 ADC samples: Avg = 35370 (-166.7 uncal um), Error = 0.9 uncal um, Median = 35368 (-166.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35362 (-166.6 uncal um), Max = 35377 (-166.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:34:41.364 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35370, posNoise = 7, negNoise = 8
17-03-18 03:34:41.364 -07 000000610 INF: Z Motor: After move to -0.167539, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:41.364 -07 000000610 INF: Z Motor: Settle wait time = 1462 ms, measure time = 110 ms (allowed 150 ms), total time = 1572 ms
17-03-18 03:34:41.364 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:41.404 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1615 ms
17-03-18 03:34:41.404 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:41.404 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51806640625, Z-position -0.16754773546522. ----------
17-03-18 03:34:41.404 -07 000000610 INF: Cycle	114	Tile	15	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:41.404 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36422, sync = True, waitForSettling = True)
17-03-18 03:34:41.404 -07 000000610 INF: Z Motor: Moving to -0.166729 mm, started at -0.167548 mm, distance = 0.82 um
17-03-18 03:34:41.404 -07 000000610 INF: FPGA: Xmit ZDACW 36422\n [Z Motor]
17-03-18 03:34:41.404 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:34:41.414 -07 000000610 INF: FPGA: 'ZDACW 36422' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:41.414 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:41.414 -07 000000606 INF: FPGA: Recv ZDACR 36422
17-03-18 03:34:41.424 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.424 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:41.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.574 -07 000000579 INF: FPGA: Recv ZSGSRD 35245
17-03-18 03:34:41.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:41.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.584 -07 000000606 INF: FPGA: Recv ZSGSRD 35250
17-03-18 03:34:41.584 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:41.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:41.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.594 -07 000000502 INF: FPGA: Recv ZSGSRD 35244
17-03-18 03:34:41.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.604 -07 000000501 INF: FPGA: Recv ZSGSRD 35244
17-03-18 03:34:41.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.614 -07 000000444 INF: FPGA: Recv ZSGSRD 35242
17-03-18 03:34:41.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.624 -07 000000606 INF: FPGA: Recv ZSGSRD 35244
17-03-18 03:34:41.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.634 -07 000000590 INF: FPGA: Recv ZSGSRD 35245
17-03-18 03:34:41.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.644 -07 000000606 INF: FPGA: Recv ZSGSRD 35244
17-03-18 03:34:41.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.654 -07 000000444 INF: FPGA: Recv ZSGSRD 35243
17-03-18 03:34:41.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:41.664 -07 000000512 INF: FPGA: Recv ZSGSRD 35246
17-03-18 03:34:41.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.674 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:41.674 -07 000000579 INF: FPGA: Recv ZPIEZORD 30980
17-03-18 03:34:41.684 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:41.684 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.558 V. Piezo Error = -9.4 V.
17-03-18 03:34:41.684 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.7 um, Read 10 ADC samples: Avg = 35245 (-165.9 uncal um), Error = 0.9 uncal um, Median = 35244 (-165.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35242 (-165.9 uncal um), Max = 35250 (-165.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:34:41.684 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35245, posNoise = 5, negNoise = 3
17-03-18 03:34:41.684 -07 000000610 INF: Z Motor: After move to -0.166729, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:41.684 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:34:41.684 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:41.684 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:41.684 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:41.684 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:41.684 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:41.684 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:41.684 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:41.684 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:41.684 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:41.684 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:41.684 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:41.684 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:41.694 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:34:41.694 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:41.694 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:34:41.694 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:41.704 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:34:41.704 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:34:41.704 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:34:41.704 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:34:41.704 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 36599 150\n [Camera]
17-03-18 03:34:41.904 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:42.314 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:42.314 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:42.314 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:42.314 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:42.314 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) start.
17-03-18 03:34:42.314 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:42.314 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:42.324 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:42.324 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:42.324 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:34:42.504 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36599 792
17-03-18 03:34:42.534 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.001704,
17-03-18 03:34:42.654 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:42.684 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 03:34:42.694 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-18 03:34:42.694 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:42.694 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:42.704 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:34:42.704 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:34:42.704 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:34:42.704 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:42.704 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:42.704 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:34:42.854 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:42.854 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:42.854 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:42.854 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:42.854 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:34:42.854 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:42.854 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:42.864 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:42.864 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:42.864 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:34:43.044 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:43.044 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:43.044 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 36599 150' command took 2 ms to send, 1327 ms to get response, and 1337 ms overall
17-03-18 03:34:43.044 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.167139
17-03-18 03:34:43.044 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.16714 mm
17-03-18 03:34:43.044 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:43.054 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 36512, sync = True, waitForSettling = False)
17-03-18 03:34:43.054 -07 000000606 INF: Z Motor: Moving to -0.167141 mm, started at -0.166745 mm, distance = -0.40 um
17-03-18 03:34:43.054 -07 000000606 INF: FPGA: Xmit ZDACW 36512\n [Z Motor]
17-03-18 03:34:43.054 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:34:43.054 -07 000000590 INF: Y Motor: Moving to 72.3626 mm, started at 71.5181 mm, delta = 0.8445 mm
17-03-18 03:34:43.054 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:34:43.064 -07 000000606 INF: FPGA: 'ZDACW 36512' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:34:43.064 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:43.064 -07 000000444 INF: FPGA: Recv YRDPOS 146470
17-03-18 03:34:43.074 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:34:43.074 -07 000000590 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:43.074 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:43.074 -07 000000502 INF: FPGA: Recv ZDACR 36512
17-03-18 03:34:43.074 -07 000000590 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:43.074 -07 000000590 INF: Y Motor: Moving 1350 steps-30
17-03-18 03:34:43.084 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:34:43.084 -07 000000606 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:34:43.084 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:43.244 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 03:34:43.244 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:34:43.244 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:34:43.244 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:43.244 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:34:43.244 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:43.254 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:43.254 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:34:43.254 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:43.254 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:34:43.454 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 03:34:43.454 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-18 03:34:43.504 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:43.514 -07 000000606 INF: FPGA: Recv YRDPOS 148170
17-03-18 03:34:43.514 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:43.514 -07 000000590 INF: Y Motor: Encoder = 148170 = motor step 115757.8 = 72.3486 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:43.514 -07 000000590 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:34:43.514 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.845 mm, average velocity = 2.205 mm/sec
17-03-18 03:34:44.464 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:44.464 -07 000000512 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:34:44.474 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.474 -07 000000590 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:44.494 -07 000000590 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:44.494 -07 000000590 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:34:44.494 -07 000000590 INF: Y Motor: Moved to 72.3491 after 1444 ms (table move)
17-03-18 03:34:44.504 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167141 mm (DAC = 36512)
17-03-18 03:34:44.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.504 -07 000000512 INF: FPGA: Recv ZSGSRD 35308
17-03-18 03:34:44.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:34:44.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.514 -07 000000501 INF: FPGA: Recv ZSGSRD 35311
17-03-18 03:34:44.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.524 -07 000000590 INF: FPGA: Recv ZSGSRD 35305
17-03-18 03:34:44.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.534 -07 000000444 INF: FPGA: Recv ZSGSRD 35309
17-03-18 03:34:44.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.544 -07 000000502 INF: FPGA: Recv ZSGSRD 35309
17-03-18 03:34:44.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.554 -07 000000512 INF: FPGA: Recv ZSGSRD 35310
17-03-18 03:34:44.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.564 -07 000000606 INF: FPGA: Recv ZSGSRD 35301
17-03-18 03:34:44.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.574 -07 000000512 INF: FPGA: Recv ZSGSRD 35305
17-03-18 03:34:44.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.584 -07 000000591 INF: FPGA: Recv ZSGSRD 35313
17-03-18 03:34:44.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.594 -07 000000501 INF: FPGA: Recv ZSGSRD 35309
17-03-18 03:34:44.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.604 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:44.604 -07 000000591 INF: FPGA: Recv ZPIEZORD 31079
17-03-18 03:34:44.614 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.614 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.571 V. Piezo Error = -9.3 V.
17-03-18 03:34:44.614 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35308 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35309 (-166.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35301 (-166.2 uncal um), Max = 35313 (-166.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:34:44.614 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35308, posNoise = 5, negNoise = 7
17-03-18 03:34:44.614 -07 000000610 INF: Z Motor: After move to -0.167141, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:44.614 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 109 ms (allowed 150 ms), total time = 1556 ms
17-03-18 03:34:44.614 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:44.664 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1610 ms
17-03-18 03:34:44.664 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:44.664 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.167149434312431. ----------
17-03-18 03:34:44.664 -07 000000610 INF: Cycle	114	Tile	16	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:44.664 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36335, sync = True, waitForSettling = True)
17-03-18 03:34:44.664 -07 000000610 INF: Z Motor: Moving to -0.166331 mm, started at -0.167149 mm, distance = 0.82 um
17-03-18 03:34:44.664 -07 000000610 INF: FPGA: Xmit ZDACW 36335\n [Z Motor]
17-03-18 03:34:44.674 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:34:44.674 -07 000000610 INF: FPGA: 'ZDACW 36335' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:34:44.674 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:44.674 -07 000000512 INF: FPGA: Recv ZDACR 36335
17-03-18 03:34:44.684 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:34:44.684 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:44.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.834 -07 000000579 INF: FPGA: Recv ZSGSRD 35185
17-03-18 03:34:44.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:44.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.844 -07 000000590 INF: FPGA: Recv ZSGSRD 35182
17-03-18 03:34:44.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.854 -07 000000501 INF: FPGA: Recv ZSGSRD 35186
17-03-18 03:34:44.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.864 -07 000000502 INF: FPGA: Recv ZSGSRD 35181
17-03-18 03:34:44.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.874 -07 000000579 INF: FPGA: Recv ZSGSRD 35183
17-03-18 03:34:44.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.884 -07 000000591 INF: FPGA: Recv ZSGSRD 35180
17-03-18 03:34:44.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.894 -07 000000512 INF: FPGA: Recv ZSGSRD 35183
17-03-18 03:34:44.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.904 -07 000000606 INF: FPGA: Recv ZSGSRD 35183
17-03-18 03:34:44.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.914 -07 000000579 INF: FPGA: Recv ZSGSRD 35181
17-03-18 03:34:44.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:44.924 -07 000000590 INF: FPGA: Recv ZSGSRD 35186
17-03-18 03:34:44.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.934 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:44.934 -07 000000512 INF: FPGA: Recv ZPIEZORD 30879
17-03-18 03:34:44.944 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:44.944 -07 000000610 INF: Z Motor: Piezo is near 46.0 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.544 V. Piezo Error = -9.5 V.
17-03-18 03:34:44.944 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.3 um, Read 10 ADC samples: Avg = 35183 (-165.5 uncal um), Error = 0.9 uncal um, Median = 35183 (-165.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35180 (-165.5 uncal um), Max = 35186 (-165.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:34:44.944 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35183, posNoise = 3, negNoise = 3
17-03-18 03:34:44.944 -07 000000610 INF: Z Motor: After move to -0.166331, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:44.944 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 03:34:44.944 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:44.944 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:44.944 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:44.944 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:44.944 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:44.944 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:44.944 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:44.944 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:44.944 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:44.944 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:44.944 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:44.944 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:44.954 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:34:44.954 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:44.954 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:34:44.954 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:44.964 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 03:34:44.964 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 03:34:44.964 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:34:44.964 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:34:44.964 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 36512 150\n [Camera]
17-03-18 03:34:45.174 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:45.574 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:45.574 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:45.574 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:45.574 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:45.574 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:34:45.584 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:45.584 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:45.584 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:45.584 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:45.584 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:34:45.774 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36512 792
17-03-18 03:34:45.914 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:45.954 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:34:45.954 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:34:45.954 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:45.954 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:34:45.954 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:34:45.954 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:45.954 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:45.954 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:34:45.964 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:45.964 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:34:46.114 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:46.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:46.114 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:46.114 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:46.114 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:34:46.114 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:46.114 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:46.114 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:46.114 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:46.114 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 03:34:46.304 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:46.304 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:46.304 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 36512 150' command took 2 ms to send, 1326 ms to get response, and 1337 ms overall
17-03-18 03:34:46.304 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:34:46.304 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.34912109375, Z-Position -0.166346407794711. ------
17-03-18 03:34:46.314 -07 000000444 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.17284 mm
17-03-18 03:34:46.314 -07 000000444 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:46.314 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:34:46.314 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 37757, sync = True, waitForSettling = False)
17-03-18 03:34:46.314 -07 000000501 INF: Z Motor: Moving to -0.172840 mm, started at -0.166346 mm, distance = -6.49 um
17-03-18 03:34:46.314 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:34:46.314 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:34:46.314 -07 000000590 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm
17-03-18 03:34:46.324 -07 000000501 INF: FPGA: Xmit ZDACW 37757\n [Z Motor]
17-03-18 03:34:46.324 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:34:46.324 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:34:46.334 -07 000000501 INF: FPGA: 'ZDACW 37757' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:34:46.334 -07 000000512 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:34:46.344 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:46.344 -07 000000502 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:34:46.354 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:46.354 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-18 03:34:46.354 -07 000000590 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:46.354 -07 000000590 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:46.354 -07 000000590 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:34:46.354 -07 000000606 INF: FPGA: Recv ZDACR 37757
17-03-18 03:34:46.364 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:46.364 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:46.364 -07 000000501 INF: Z Motor: MoveAbsStepped took 42 ms (did NOT wait for settling yet))
17-03-18 03:34:46.504 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:34:46.504 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:34:46.504 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:46.504 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:34:46.504 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:34:46.504 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:46.514 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:46.514 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:46.514 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:34:46.514 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:34:46.534 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:34:46.534 -07 000000512 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 212 ms overall
17-03-18 03:34:46.584 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:46.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:46.734 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:34:46.734 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:34:46.794 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:46.794 -07 000000591 INF: FPGA: Recv YRDPOS 149863
17-03-18 03:34:46.804 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:46.804 -07 000000590 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:46.804 -07 000000590 INF: Y Motor: Position error before settling (table move) = -35 encoder counts (-0.017 mm)
17-03-18 03:34:46.804 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.843 mm, average velocity = 2.180 mm/sec
17-03-18 03:34:47.754 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:47.754 -07 000000512 INF: FPGA: Recv YRDPOS 149864
17-03-18 03:34:47.764 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:47.764 -07 000000590 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:47.784 -07 000000590 INF: Y Motor: After move to 73.192604, error = -0.016823, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:47.784 -07 000000590 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:34:47.784 -07 000000590 INF: Y Motor: Moved to 73.1758 after 1470 ms (table move)
17-03-18 03:34:47.794 -07 000000444 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172840 mm (DAC = 37757)
17-03-18 03:34:47.794 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:47.794 -07 000000502 INF: FPGA: Recv ZSGSRD 36205
17-03-18 03:34:47.804 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:34:47.804 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:47.804 -07 000000591 INF: FPGA: Recv ZSGSRD 36197
17-03-18 03:34:47.814 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:47.814 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:47.814 -07 000000606 INF: FPGA: Recv ZSGSRD 36195
17-03-18 03:34:47.824 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:47.824 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:47.824 -07 000000591 INF: FPGA: Recv ZSGSRD 36196
17-03-18 03:34:47.834 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:47.834 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:47.834 -07 000000590 INF: FPGA: Recv ZSGSRD 36197
17-03-18 03:34:47.844 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:47.844 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:47.844 -07 000000591 INF: FPGA: Recv ZSGSRD 36196
17-03-18 03:34:47.854 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:47.854 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:47.854 -07 000000501 INF: FPGA: Recv ZSGSRD 36193
17-03-18 03:34:47.864 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:47.864 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:47.864 -07 000000512 INF: FPGA: Recv ZSGSRD 36196
17-03-18 03:34:47.874 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:47.874 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:47.874 -07 000000501 INF: FPGA: Recv ZSGSRD 36191
17-03-18 03:34:47.884 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:47.884 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:47.884 -07 000000591 INF: FPGA: Recv ZSGSRD 36198
17-03-18 03:34:47.894 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:47.914 -07 000000444 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:47.914 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.974486,
17-03-18 03:34:47.914 -07 000000501 INF: FPGA: Recv ZPIEZORD 32253
17-03-18 03:34:47.924 -07 000000444 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:47.924 -07 000000444 INF: Z Motor: Piezo is near 48.9 V (nominally 0 to 100 V), expect near 57.6 V, since DAC is at 5.761 V. Piezo Error = -8.7 V.
17-03-18 03:34:47.924 -07 000000444 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.8 um, Read 10 ADC samples: Avg = 36196 (-172.0 uncal um), Error = 0.9 uncal um, Median = 36196 (-172.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36191 (-171.9 uncal um), Max = 36205 (-172.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:34:47.924 -07 000000444 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36196, posNoise = 9, negNoise = 5
17-03-18 03:34:47.924 -07 000000444 INF: Z Motor: After move to -0.172840, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:47.924 -07 000000444 INF: Z Motor: Settle wait time = 1476 ms, measure time = 126 ms (allowed 150 ms), total time = 1602 ms
17-03-18 03:34:47.924 -07 000000444 INF: Z Motor: Waiting extra 24 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:47.954 -07 000000444 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1635 ms
17-03-18 03:34:47.954 -07 000000444 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:47.954 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:47.954 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:47.954 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:47.954 -07 000000606 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:34:47.954 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:47.954 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:47.954 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:34:47.954 -07 000000606 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:34:47.964 -07 000000606 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:34:47.964 -07 000000606 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:34:47.974 -07 000000606 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:34:47.974 -07 000000606 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:34:47.974 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:34:48.024 -07 000000502 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:34:48.324 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:34:48.324 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:34:48.324 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:34:48.324 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610603336, 0x0, 559484976) start.
17-03-18 03:34:48.364 -07 000000579 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:34:48.364 -07 000000501 INF: FPGA: Recv CAMSNAP
17-03-18 03:34:48.364 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 385 ms overall
17-03-18 03:34:48.454 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610603336, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:34:48.454 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:48.454 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:34:48.454 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-18 03:34:48.464 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:34:48.464 -07 000000512 INF: Autofocus start
17-03-18 03:34:48.464 -07 000000512 INF: MeasureProfile start
17-03-18 03:34:48.464 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:34:48.474 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:34:48.474 -07 000000501 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:34:48.474 -07 000000512 INF: MeasureProfile done
17-03-18 03:34:48.474 -07 000000512 INF: X=64  Z correction [um]=0.2557664
17-03-18 03:34:48.474 -07 000000512 INF: Autofocus finished
17-03-18 03:34:48.674 -07 000000512 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:34:48.674 -07 000000501 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:34:48.674 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17578125, Z-position -0.172854134694315. ----------
17-03-18 03:34:48.684 -07 000000610 INF: Cycle	114	Tile	17	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:48.684 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36325, sync = True, waitForSettling = True)
17-03-18 03:34:48.684 -07 000000610 INF: Z Motor: Moving to -0.166285 mm, started at -0.172854 mm, distance = 6.57 um
17-03-18 03:34:48.684 -07 000000610 INF: FPGA: Xmit ZDACW 36325\n [Z Motor]
17-03-18 03:34:48.684 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:34:48.694 -07 000000610 INF: FPGA: 'ZDACW 36325' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:34:48.694 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:48.694 -07 000000502 INF: FPGA: Recv ZDACR 36325
17-03-18 03:34:48.704 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:48.704 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:48.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:48.854 -07 000000501 INF: FPGA: Recv ZSGSRD 35174
17-03-18 03:34:48.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:48.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:48.864 -07 000000579 INF: FPGA: Recv ZSGSRD 35172
17-03-18 03:34:48.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:48.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:48.874 -07 000000591 INF: FPGA: Recv ZSGSRD 35175
17-03-18 03:34:48.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:48.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:48.884 -07 000000502 INF: FPGA: Recv ZSGSRD 35173
17-03-18 03:34:48.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:48.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:48.894 -07 000000501 INF: FPGA: Recv ZSGSRD 35180
17-03-18 03:34:48.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:48.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:48.904 -07 000000444 INF: FPGA: Recv ZSGSRD 35174
17-03-18 03:34:48.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:48.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:48.914 -07 000000606 INF: FPGA: Recv ZSGSRD 35174
17-03-18 03:34:48.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:48.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:48.924 -07 000000579 INF: FPGA: Recv ZSGSRD 35179
17-03-18 03:34:48.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:48.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:48.934 -07 000000501 INF: FPGA: Recv ZSGSRD 35170
17-03-18 03:34:48.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:48.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:48.944 -07 000000512 INF: FPGA: Recv ZSGSRD 35177
17-03-18 03:34:48.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:48.954 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:48.954 -07 000000591 INF: FPGA: Recv ZPIEZORD 30891
17-03-18 03:34:48.964 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:48.964 -07 000000610 INF: Z Motor: Piezo is near 46.0 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.543 V. Piezo Error = -9.4 V.
17-03-18 03:34:48.964 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.3 um, Read 10 ADC samples: Avg = 35175 (-165.4 uncal um), Error = 0.9 uncal um, Median = 35174 (-165.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35170 (-165.4 uncal um), Max = 35180 (-165.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:34:48.964 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35175, posNoise = 5, negNoise = 5
17-03-18 03:34:48.964 -07 000000610 INF: Z Motor: After move to -0.166285, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:48.964 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:34:48.964 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:48.964 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:48.964 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:48.964 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:48.964 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:48.964 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:48.964 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:48.964 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:48.964 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:34:48.964 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:48.964 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:48.964 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:48.974 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:34:48.974 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:48.974 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:34:48.974 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:48.984 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:34:48.984 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:34:48.984 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:34:48.984 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:34:48.994 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 36502 150\n [Camera]
17-03-18 03:34:49.184 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:49.594 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:49.594 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:49.594 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:49.594 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:49.594 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 03:34:49.604 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:49.604 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:49.604 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:49.604 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:49.604 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 03:34:49.794 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36502 792
17-03-18 03:34:49.934 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:49.974 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:34:49.974 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:34:49.974 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:49.974 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:34:49.974 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:34:49.974 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:49.984 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:49.984 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:34:49.984 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:34:49.984 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:34:50.134 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:50.134 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:50.134 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:50.134 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:50.134 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-18 03:34:50.134 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:50.134 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:50.134 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:50.134 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:50.134 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-18 03:34:50.324 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:50.324 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:50.324 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 36502 150' command took 2 ms to send, 1328 ms to get response, and 1337 ms overall
17-03-18 03:34:50.334 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166724
17-03-18 03:34:50.334 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16672 mm
17-03-18 03:34:50.334 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:50.334 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:34:50.334 -07 000000512 INF: Y Motor: Moving to 74.0226 mm, started at 73.1758 mm, delta = 0.8468 mm
17-03-18 03:34:50.334 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:50.334 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 36421, sync = True, waitForSettling = False)
17-03-18 03:34:50.334 -07 000000591 INF: Z Motor: Moving to -0.166725 mm, started at -0.166295 mm, distance = -0.43 um
17-03-18 03:34:50.334 -07 000000590 INF: FPGA: Recv YRDPOS 149864
17-03-18 03:34:50.344 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:50.344 -07 000000512 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:50.344 -07 000000512 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:50.344 -07 000000512 INF: Y Motor: Moving 1355 steps-35
17-03-18 03:34:50.344 -07 000000591 INF: FPGA: Xmit ZDACW 36421\n [Z Motor]
17-03-18 03:34:50.344 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:34:50.354 -07 000000591 INF: FPGA: 'ZDACW 36421' command took 1 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:34:50.354 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:50.354 -07 000000590 INF: FPGA: Recv ZDACR 36421
17-03-18 03:34:50.364 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:50.364 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:50.364 -07 000000591 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 03:34:50.524 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 389 ms.
17-03-18 03:34:50.524 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:34:50.524 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:50.524 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 389 ms.
17-03-18 03:34:50.524 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:34:50.524 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:50.534 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:50.534 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 03:34:50.534 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:34:50.544 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:34:50.734 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 03:34:50.734 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:34:50.774 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:50.784 -07 000000444 INF: FPGA: Recv YRDPOS 151567
17-03-18 03:34:50.784 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:34:50.784 -07 000000512 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:50.784 -07 000000512 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:34:50.784 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.847 mm, average velocity = 2.128 mm/sec
17-03-18 03:34:51.584 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:51.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:51.734 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:51.734 -07 000000592 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:34:51.744 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.744 -07 000000512 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:51.764 -07 000000512 INF: Y Motor: After move to 74.022606, error = -0.014793, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:51.764 -07 000000512 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:34:51.764 -07 000000512 INF: Y Motor: Moved to 74.0078 after 1427 ms (table move)
17-03-18 03:34:51.764 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166725 mm (DAC = 36421)
17-03-18 03:34:51.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:51.764 -07 000000438 INF: FPGA: Recv ZSGSRD 35246
17-03-18 03:34:51.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:51.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:51.774 -07 000000502 INF: FPGA: Recv ZSGSRD 35236
17-03-18 03:34:51.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:51.784 -07 000000591 INF: FPGA: Recv ZSGSRD 35247
17-03-18 03:34:51.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:51.794 -07 000000502 INF: FPGA: Recv ZSGSRD 35245
17-03-18 03:34:51.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:51.804 -07 000000438 INF: FPGA: Recv ZSGSRD 35249
17-03-18 03:34:51.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:51.814 -07 000000592 INF: FPGA: Recv ZSGSRD 35250
17-03-18 03:34:51.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:51.824 -07 000000512 INF: FPGA: Recv ZSGSRD 35237
17-03-18 03:34:51.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:51.834 -07 000000592 INF: FPGA: Recv ZSGSRD 35241
17-03-18 03:34:51.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:51.844 -07 000000591 INF: FPGA: Recv ZSGSRD 35243
17-03-18 03:34:51.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:51.854 -07 000000592 INF: FPGA: Recv ZSGSRD 35243
17-03-18 03:34:51.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.864 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:51.864 -07 000000606 INF: FPGA: Recv ZPIEZORD 31001
17-03-18 03:34:51.874 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.874 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.557 V. Piezo Error = -9.3 V.
17-03-18 03:34:51.874 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.7 um, Read 10 ADC samples: Avg = 35244 (-165.9 uncal um), Error = 0.9 uncal um, Median = 35244 (-165.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35236 (-165.8 uncal um), Max = 35250 (-165.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:34:51.874 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35244, posNoise = 6, negNoise = 8
17-03-18 03:34:51.874 -07 000000610 INF: Z Motor: After move to -0.166725, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:51.874 -07 000000610 INF: Z Motor: Settle wait time = 1428 ms, measure time = 104 ms (allowed 150 ms), total time = 1532 ms
17-03-18 03:34:51.874 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:51.924 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1589 ms
17-03-18 03:34:51.924 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:51.924 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0078125, Z-position -0.166738284735358. ----------
17-03-18 03:34:51.924 -07 000000610 INF: Cycle	114	Tile	18	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:51.924 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36244, sync = True, waitForSettling = True)
17-03-18 03:34:51.924 -07 000000610 INF: Z Motor: Moving to -0.165914 mm, started at -0.166738 mm, distance = 0.82 um
17-03-18 03:34:51.924 -07 000000610 INF: FPGA: Xmit ZDACW 36244\n [Z Motor]
17-03-18 03:34:51.924 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:34:51.934 -07 000000610 INF: FPGA: 'ZDACW 36244' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:51.934 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:51.934 -07 000000606 INF: FPGA: Recv ZDACR 36244
17-03-18 03:34:51.944 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:51.944 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:52.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:52.094 -07 000000444 INF: FPGA: Recv ZSGSRD 35119
17-03-18 03:34:52.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:52.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:52.104 -07 000000502 INF: FPGA: Recv ZSGSRD 35121
17-03-18 03:34:52.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:52.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:52.114 -07 000000579 INF: FPGA: Recv ZSGSRD 35118
17-03-18 03:34:52.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:52.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:52.124 -07 000000502 INF: FPGA: Recv ZSGSRD 35120
17-03-18 03:34:52.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:52.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:52.134 -07 000000512 INF: FPGA: Recv ZSGSRD 35118
17-03-18 03:34:52.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:52.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:52.144 -07 000000438 INF: FPGA: Recv ZSGSRD 35119
17-03-18 03:34:52.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:52.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:52.154 -07 000000579 INF: FPGA: Recv ZSGSRD 35113
17-03-18 03:34:52.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:52.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:52.164 -07 000000502 INF: FPGA: Recv ZSGSRD 35118
17-03-18 03:34:52.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:52.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:52.174 -07 000000512 INF: FPGA: Recv ZSGSRD 35120
17-03-18 03:34:52.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:52.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:52.184 -07 000000502 INF: FPGA: Recv ZSGSRD 35119
17-03-18 03:34:52.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:52.194 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:52.194 -07 000000592 INF: FPGA: Recv ZPIEZORD 30854
17-03-18 03:34:52.204 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:52.204 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.530 V. Piezo Error = -9.4 V.
17-03-18 03:34:52.204 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.9 um, Read 10 ADC samples: Avg = 35118 (-165.1 uncal um), Error = 0.9 uncal um, Median = 35119 (-165.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35113 (-165.0 uncal um), Max = 35121 (-165.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:34:52.204 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35118, posNoise = 3, negNoise = 5
17-03-18 03:34:52.204 -07 000000610 INF: Z Motor: After move to -0.165914, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:52.204 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:34:52.204 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:52.204 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:52.204 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:52.204 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:52.204 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:52.204 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:52.204 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:52.204 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:52.204 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:52.204 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:52.204 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:52.204 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:52.214 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:34:52.214 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:52.214 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:34:52.214 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:52.224 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:34:52.224 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:34:52.224 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:34:52.224 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:34:52.224 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 36421 150\n [Camera]
17-03-18 03:34:52.424 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:52.834 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:52.834 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:52.834 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:52.834 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:52.834 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start.
17-03-18 03:34:52.834 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:52.834 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:52.834 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:52.834 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:52.834 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-18 03:34:53.024 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36421 792
17-03-18 03:34:53.174 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 944
17-03-18 03:34:53.214 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:34:53.214 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:34:53.214 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:53.214 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:34:53.214 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:34:53.214 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:53.214 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:53.214 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:53.214 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:34:53.224 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:34:53.284 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.977204,
17-03-18 03:34:53.364 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:53.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:53.374 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:53.374 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:53.374 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start.
17-03-18 03:34:53.374 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:53.374 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:53.374 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:53.374 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:53.374 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start.
17-03-18 03:34:53.564 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:53.564 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:53.564 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 36421 150' command took 2 ms to send, 1331 ms to get response, and 1337 ms overall
17-03-18 03:34:53.564 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.165757
17-03-18 03:34:53.564 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16576 mm
17-03-18 03:34:53.564 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:53.564 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:34:53.564 -07 000000512 INF: Y Motor: Moving to 74.8526 mm, started at 74.0078 mm, delta = 0.8448 mm
17-03-18 03:34:53.564 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 36210, sync = True, waitForSettling = False)
17-03-18 03:34:53.564 -07 000000438 INF: Z Motor: Moving to -0.165759 mm, started at -0.165929 mm, distance = 0.17 um
17-03-18 03:34:53.564 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:53.564 -07 000000606 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:34:53.574 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:53.574 -07 000000512 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:53.574 -07 000000512 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:34:53.574 -07 000000512 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:34:53.574 -07 000000438 INF: FPGA: Xmit ZDACW 36210\n [Z Motor]
17-03-18 03:34:53.574 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:34:53.584 -07 000000438 INF: FPGA: 'ZDACW 36210' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:34:53.594 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:34:53.604 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:53.604 -07 000000444 INF: FPGA: Recv ZDACR 36210
17-03-18 03:34:53.614 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:53.614 -07 000000438 INF: Z Motor: MoveAbsStepped took 44 ms (did NOT wait for settling yet))
17-03-18 03:34:53.764 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 390 ms.
17-03-18 03:34:53.764 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:34:53.764 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:53.764 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 03:34:53.764 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:34:53.764 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:53.764 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:53.764 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:34:53.764 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:53.774 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:34:53.964 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:34:53.964 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:34:53.994 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:54.004 -07 000000569 INF: FPGA: Recv YRDPOS 153254
17-03-18 03:34:54.004 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:34:54.004 -07 000000512 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:54.004 -07 000000512 INF: Y Motor: Position error before settling (table move) = -44 encoder counts (-0.021 mm)
17-03-18 03:34:54.004 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.128 mm/sec
17-03-18 03:34:54.954 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:54.954 -07 000000579 INF: FPGA: Recv YRDPOS 153254
17-03-18 03:34:54.964 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:54.964 -07 000000512 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:54.974 -07 000000512 INF: Y Motor: After move to 74.852608, error = -0.021553, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:34:54.974 -07 000000512 INF: Y Motor: Position error after settling (table move) = -44 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:34:54.974 -07 000000512 INF: Y Motor: Moved to 74.8311 after 1413 ms (table move)
17-03-18 03:34:54.984 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.165759 mm (DAC = 36210)
17-03-18 03:34:54.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:54.984 -07 000000579 INF: FPGA: Recv ZSGSRD 35087
17-03-18 03:34:54.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:34:54.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:54.994 -07 000000579 INF: FPGA: Recv ZSGSRD 35085
17-03-18 03:34:55.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.004 -07 000000579 INF: FPGA: Recv ZSGSRD 35089
17-03-18 03:34:55.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.014 -07 000000611 INF: FPGA: Recv ZSGSRD 35093
17-03-18 03:34:55.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.024 -07 000000502 INF: FPGA: Recv ZSGSRD 35093
17-03-18 03:34:55.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.034 -07 000000512 INF: FPGA: Recv ZSGSRD 35093
17-03-18 03:34:55.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.044 -07 000000611 INF: FPGA: Recv ZSGSRD 35101
17-03-18 03:34:55.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.054 -07 000000611 INF: FPGA: Recv ZSGSRD 35098
17-03-18 03:34:55.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.064 -07 000000611 INF: FPGA: Recv ZSGSRD 35090
17-03-18 03:34:55.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.074 -07 000000579 INF: FPGA: Recv ZSGSRD 35099
17-03-18 03:34:55.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.084 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:55.084 -07 000000591 INF: FPGA: Recv ZPIEZORD 30803
17-03-18 03:34:55.094 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.094 -07 000000610 INF: Z Motor: Piezo is near 45.8 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.525 V. Piezo Error = -9.4 V.
17-03-18 03:34:55.094 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.8 um, Read 10 ADC samples: Avg = 35093 (-164.9 uncal um), Error = 0.9 uncal um, Median = 35093 (-164.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35085 (-164.9 uncal um), Max = 35101 (-165.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:34:55.094 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35093, posNoise = 8, negNoise = 8
17-03-18 03:34:55.094 -07 000000610 INF: Z Motor: After move to -0.165759, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:55.094 -07 000000610 INF: Z Motor: Settle wait time = 1416 ms, measure time = 109 ms (allowed 150 ms), total time = 1525 ms
17-03-18 03:34:55.094 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:34:55.144 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1576 ms
17-03-18 03:34:55.144 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:34:55.144 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.8310546875, Z-position -0.165768228701952. ----------
17-03-18 03:34:55.144 -07 000000610 INF: Cycle	114	Tile	19	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:34:55.144 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36033, sync = True, waitForSettling = True)
17-03-18 03:34:55.144 -07 000000610 INF: Z Motor: Moving to -0.164949 mm, started at -0.165768 mm, distance = 0.82 um
17-03-18 03:34:55.144 -07 000000610 INF: FPGA: Xmit ZDACW 36033\n [Z Motor]
17-03-18 03:34:55.144 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 03:34:55.154 -07 000000610 INF: FPGA: 'ZDACW 36033' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:55.154 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:55.154 -07 000000502 INF: FPGA: Recv ZDACR 36033
17-03-18 03:34:55.164 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.164 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:34:55.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.314 -07 000000606 INF: FPGA: Recv ZSGSRD 34970
17-03-18 03:34:55.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:55.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.324 -07 000000606 INF: FPGA: Recv ZSGSRD 34970
17-03-18 03:34:55.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.334 -07 000000502 INF: FPGA: Recv ZSGSRD 34970
17-03-18 03:34:55.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:55.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.344 -07 000000591 INF: FPGA: Recv ZSGSRD 34966
17-03-18 03:34:55.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.354 -07 000000502 INF: FPGA: Recv ZSGSRD 34971
17-03-18 03:34:55.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.364 -07 000000502 INF: FPGA: Recv ZSGSRD 34968
17-03-18 03:34:55.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.374 -07 000000502 INF: FPGA: Recv ZSGSRD 34971
17-03-18 03:34:55.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.384 -07 000000424 INF: FPGA: Recv ZSGSRD 34965
17-03-18 03:34:55.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.394 -07 000000424 INF: FPGA: Recv ZSGSRD 34968
17-03-18 03:34:55.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:34:55.404 -07 000000424 INF: FPGA: Recv ZSGSRD 34970
17-03-18 03:34:55.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.414 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:34:55.414 -07 000000579 INF: FPGA: Recv ZPIEZORD 30641
17-03-18 03:34:55.424 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:34:55.424 -07 000000610 INF: Z Motor: Piezo is near 45.5 V (nominally 0 to 100 V), expect near 55.0 V, since DAC is at 5.498 V. Piezo Error = -9.5 V.
17-03-18 03:34:55.424 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -164.9 um, Read 10 ADC samples: Avg = 34969 (-164.1 uncal um), Error = 0.8 uncal um, Median = 34970 (-164.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 34965 (-164.1 uncal um), Max = 34971 (-164.1 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:34:55.424 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34969, posNoise = 2, negNoise = 4
17-03-18 03:34:55.424 -07 000000610 INF: Z Motor: After move to -0.164949, error = -0.000023, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:34:55.424 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:34:55.424 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:34:55.424 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:34:55.424 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:34:55.424 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:34:55.424 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:34:55.424 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:34:55.424 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:34:55.424 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:34:55.424 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:34:55.424 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:34:55.424 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:34:55.424 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:34:55.424 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:34:55.424 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:34:55.434 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:34:55.434 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:34:55.444 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:34:55.444 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:34:55.444 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:34:55.444 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:34:55.444 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 36210 150\n [Camera]
17-03-18 03:34:55.644 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:34:56.054 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:34:56.054 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:34:56.054 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:56.054 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:56.054 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-18 03:34:56.054 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:34:56.054 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:34:56.054 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:56.054 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:56.054 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-18 03:34:56.244 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36210 792
17-03-18 03:34:56.394 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:34:56.444 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:34:56.444 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:34:56.444 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:56.444 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:34:56.444 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:34:56.444 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:56.444 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:56.444 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:34:56.444 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:56.454 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:34:56.584 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:34:56.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:34:56.594 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:34:56.594 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:34:56.594 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:34:56.594 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:34:56.594 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) start.
17-03-18 03:34:56.594 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:34:56.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:34:56.594 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:34:56.594 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:34:56.594 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-18 03:34:56.784 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:34:56.784 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:34:56.784 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 36210 150' command took 2 ms to send, 1326 ms to get response, and 1337 ms overall
17-03-18 03:34:56.974 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:34:56.974 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:34:56.974 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:56.974 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:34:56.974 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:34:56.974 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:34:56.974 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:34:56.974 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:34:56.974 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:34:56.984 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:34:56.984 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:34:57.024 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:34:57.024 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:34:57.064 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 03:34:57.064 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-18 03:34:57.064 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:34:57.064 -07 000000606 INF: FPGA: Recv EMCUR 
17-03-18 03:34:57.074 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:34:57.074 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-18 03:34:57.574 -07 000000569 INF: FPGA: Recv EMIN
17-03-18 03:34:57.574 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 503 ms overall
17-03-18 03:34:57.574 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-18 03:34:57.574 -07 000000591 INF: FPGA: Recv EMCUR 
17-03-18 03:34:57.584 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:34:57.584 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:34:57.584 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.8310546875, Z-Position -0.164971626396374. ------
17-03-18 03:34:57.584 -07 000000438 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13953 mm
17-03-18 03:34:57.584 -07 000000438 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:34:57.594 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:34:57.594 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:34:57.594 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:34:57.594 -07 000000424 INF: Y Motor: Moving to 59.9126 mm, started at 74.8311 mm, delta = -14.9184 mm
17-03-18 03:34:57.594 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 30481, sync = True, waitForSettling = False)
17-03-18 03:34:57.594 -07 000000611 INF: Z Motor: Moving to -0.139533 mm, started at -0.164972 mm, distance = 25.44 um
17-03-18 03:34:57.604 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:34:57.604 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:34:57.604 -07 000000591 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:34:57.614 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:34:57.614 -07 000000424 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:34:57.614 -07 000000611 INF: FPGA: Xmit ZDACW 30481\n [Z Motor]
17-03-18 03:34:57.614 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:34:57.614 -07 000000424 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-18 03:34:57.614 -07 000000424 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:34:57.624 -07 000000606 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:34:57.624 -07 000000611 INF: FPGA: 'ZDACW 30481' command took 1 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:34:57.634 -07 000000424 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:34:57.644 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:34:57.644 -07 000000592 INF: FPGA: Recv ZDACR 30481
17-03-18 03:34:57.654 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:34:57.654 -07 000000611 INF: Z Motor: MoveAbsStepped took 56 ms (did NOT wait for settling yet))
17-03-18 03:34:57.824 -07 000000444 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:34:57.824 -07 000000606 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:34:58.644 -07 000000611 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.000345,
17-03-18 03:34:59.254 -07 000000606 INF: FPGA: Recv YMVTO 122703 23903
17-03-18 03:34:59.254 -07 000000424 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1618 ms to get response, and 1639 ms overall
17-03-18 03:34:59.254 -07 000000424 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:34:59.254 -07 000000424 INF: Y Motor: To move from 74.832 to 59.913 (-14.918 mm) should take 23871 steps, but required 23903 steps (14.939 mm). Slippage = 0.020 mm (0.00%).
17-03-18 03:34:59.254 -07 000000424 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1639 ms, distance = 14.918 mm, average velocity = 9.102 mm/sec
17-03-18 03:35:01.584 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:01.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:02.104 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:02.104 -07 000000591 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:35:02.114 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:02.114 -07 000000424 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:02.164 -07 000000424 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:02.164 -07 000000424 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm)
17-03-18 03:35:02.164 -07 000000424 INF: Y Motor: Moved to 59.9106 after 4569 ms
17-03-18 03:35:02.164 -07 000000438 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139533 mm (DAC = 30481)
17-03-18 03:35:02.164 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:02.164 -07 000000444 INF: FPGA: Recv ZSGSRD 31008
17-03-18 03:35:02.174 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:02.174 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:02.174 -07 000000611 INF: FPGA: Recv ZSGSRD 31005
17-03-18 03:35:02.184 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:02.184 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:02.184 -07 000000592 INF: FPGA: Recv ZSGSRD 31011
17-03-18 03:35:02.194 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:02.194 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:02.194 -07 000000611 INF: FPGA: Recv ZSGSRD 31015
17-03-18 03:35:02.204 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:02.204 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:02.204 -07 000000606 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:35:02.214 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:02.214 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:02.214 -07 000000569 INF: FPGA: Recv ZSGSRD 31015
17-03-18 03:35:02.224 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:35:02.224 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:02.224 -07 000000444 INF: FPGA: Recv ZSGSRD 31011
17-03-18 03:35:02.234 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:02.234 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:02.234 -07 000000611 INF: FPGA: Recv ZSGSRD 31015
17-03-18 03:35:02.244 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:02.244 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:02.244 -07 000000424 INF: FPGA: Recv ZSGSRD 31013
17-03-18 03:35:02.254 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:02.254 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:02.254 -07 000000591 INF: FPGA: Recv ZSGSRD 31008
17-03-18 03:35:02.264 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:02.264 -07 000000438 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:02.264 -07 000000424 INF: FPGA: Recv ZPIEZORD 26450
17-03-18 03:35:02.274 -07 000000438 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:02.274 -07 000000438 INF: Z Motor: Piezo is near 36.5 V (nominally 0 to 100 V), expect near 46.5 V, since DAC is at 4.651 V. Piezo Error = -10.0 V.
17-03-18 03:35:02.274 -07 000000438 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.5 um, Read 10 ADC samples: Avg = 31011 (-138.7 uncal um), Error = 0.8 uncal um, Median = 31011 (-138.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 31005 (-138.7 uncal um), Max = 31015 (-138.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:35:02.274 -07 000000438 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31011, posNoise = 4, negNoise = 6
17-03-18 03:35:02.274 -07 000000438 INF: Z Motor: After move to -0.139533, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:02.274 -07 000000438 INF: Z Motor: Settle wait time = 4572 ms, measure time = 105 ms (allowed 150 ms), total time = 4677 ms
17-03-18 03:35:02.274 -07 000000438 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:02.324 -07 000000438 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4730 ms
17-03-18 03:35:02.324 -07 000000438 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:02.324 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:02.324 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:02.324 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:02.324 -07 000000592 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:02.324 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:35:02.324 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:02.324 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:02.324 -07 000000424 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:35:02.354 -07 000000424 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 03:35:02.354 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:35:02.354 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:35:02.354 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:35:02.364 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 03:35:02.364 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 34 ms.
17-03-18 03:35:02.364 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:35:02.404 -07 000000444 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:35:02.704 -07 000000438 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:35:02.704 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:35:02.704 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:35:02.854 -07 000000606 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:35:02.854 -07 000000606 INF: FPGA: Recv CAMSNAP
17-03-18 03:35:02.854 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 488 ms to get response, and 494 ms overall
17-03-18 03:35:02.854 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) start.
17-03-18 03:35:02.974 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) end. Duration was 116 ms.
17-03-18 03:35:02.974 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:02.974 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:35:02.974 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 266 ms.
17-03-18 03:35:03.054 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:35:03.054 -07 000000611 INF: Image SNR check: start
17-03-18 03:35:03.054 -07 000000592 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:35:03.064 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:35:03.064 -07 000000444 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:35:03.064 -07 000000611 INF: Image SNR check: pass  [peak (Max-Min)=138.95]
17-03-18 03:35:03.064 -07 000000611 INF: Autofocus start
17-03-18 03:35:03.064 -07 000000611 INF: MeasureProfile start
17-03-18 03:35:03.084 -07 000000611 INF: MeasureProfile done
17-03-18 03:35:03.084 -07 000000611 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:35:03.084 -07 000000611 INF: Autofocus finished
17-03-18 03:35:03.264 -07 000000592 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:35:03.264 -07 000000444 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:35:03.264 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.139544594739284. ----------
17-03-18 03:35:03.274 -07 000000610 INF: Cycle	114	Tile	1	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:03.274 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28988, sync = True, waitForSettling = True)
17-03-18 03:35:03.274 -07 000000610 INF: Z Motor: Moving to -0.132699 mm, started at -0.139545 mm, distance = 6.85 um
17-03-18 03:35:03.274 -07 000000610 INF: FPGA: Xmit ZDACW 28988\n [Z Motor]
17-03-18 03:35:03.274 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 03:35:03.284 -07 000000610 INF: FPGA: 'ZDACW 28988' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:35:03.284 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:03.284 -07 000000438 INF: FPGA: Recv ZDACR 28988
17-03-18 03:35:03.294 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:03.294 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:03.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:03.444 -07 000000438 INF: FPGA: Recv ZSGSRD 29950
17-03-18 03:35:03.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:03.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:03.454 -07 000000591 INF: FPGA: Recv ZSGSRD 29946
17-03-18 03:35:03.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:03.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:03.464 -07 000000569 INF: FPGA: Recv ZSGSRD 29940
17-03-18 03:35:03.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:03.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:03.474 -07 000000569 INF: FPGA: Recv ZSGSRD 29950
17-03-18 03:35:03.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:03.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:03.484 -07 000000569 INF: FPGA: Recv ZSGSRD 29953
17-03-18 03:35:03.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:03.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:03.494 -07 000000569 INF: FPGA: Recv ZSGSRD 29946
17-03-18 03:35:03.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:03.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:03.504 -07 000000590 INF: FPGA: Recv ZSGSRD 29946
17-03-18 03:35:03.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:03.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:03.514 -07 000000591 INF: FPGA: Recv ZSGSRD 29945
17-03-18 03:35:03.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:03.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:03.524 -07 000000591 INF: FPGA: Recv ZSGSRD 29947
17-03-18 03:35:03.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:03.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:03.534 -07 000000591 INF: FPGA: Recv ZSGSRD 29947
17-03-18 03:35:03.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:03.544 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:03.544 -07 000000591 INF: FPGA: Recv ZPIEZORD 25337
17-03-18 03:35:03.554 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:03.554 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.423 V. Piezo Error = -10.1 V.
17-03-18 03:35:03.554 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29947 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29946 (-131.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29940 (-131.9 uncal um), Max = 29953 (-132.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:35:03.554 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29947, posNoise = 6, negNoise = 7
17-03-18 03:35:03.554 -07 000000610 INF: Z Motor: After move to -0.132699, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:03.554 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:35:03.554 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:03.554 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:03.554 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:03.554 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:03.554 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:03.554 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:03.554 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:03.554 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:03.554 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:35:03.554 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:03.554 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:03.554 -07 000000424 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:35:03.564 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:35:03.564 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:03.574 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:35:03.574 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:35:03.574 -07 000000424 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 21 ms.
17-03-18 03:35:03.574 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:03.584 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:35:03.584 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:03.594 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-18 03:35:03.594 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 42 ms.
17-03-18 03:35:03.604 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 29165 150\n [Camera]
17-03-18 03:35:03.804 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:04.014 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.004458,
17-03-18 03:35:04.204 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:04.204 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:04.204 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:04.214 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:04.214 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:04.214 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:04.214 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:04.214 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 583729424, 0x0, 391868352) start.
17-03-18 03:35:04.214 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:04.214 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:35:04.404 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29165 792
17-03-18 03:35:04.554 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:04.604 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 583729424, 0x0, 391868352) end. Duration was 389 ms.
17-03-18 03:35:04.604 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:35:04.604 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:04.604 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:35:04.604 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:35:04.604 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:04.604 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:04.604 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:35:04.604 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:04.614 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:35:04.744 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:04.744 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:04.744 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:04.754 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:04.754 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:04.754 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:04.874 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:04.874 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:35:04.874 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:04.874 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:35:04.934 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:35:04.934 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:04.934 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 29165 150' command took 2 ms to send, 1329 ms to get response, and 1337 ms overall
17-03-18 03:35:04.944 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.133176
17-03-18 03:35:04.944 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13318 mm
17-03-18 03:35:04.944 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:04.944 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:35:04.944 -07 000000611 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-18 03:35:04.944 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 29092, sync = True, waitForSettling = False)
17-03-18 03:35:04.944 -07 000000501 INF: Z Motor: Moving to -0.133175 mm, started at -0.132709 mm, distance = -0.47 um
17-03-18 03:35:04.944 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:04.944 -07 000000592 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:35:04.954 -07 000000501 INF: FPGA: Xmit ZDACW 29092\n [Z Motor]
17-03-18 03:35:04.954 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:35:04.954 -07 000000611 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:04.954 -07 000000611 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:04.954 -07 000000611 INF: Y Motor: Moving 1331 steps2
17-03-18 03:35:04.954 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:35:04.964 -07 000000501 INF: FPGA: 'ZDACW 29092' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:35:04.964 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:04.974 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:04.974 -07 000000424 INF: FPGA: Recv ZDACR 29092
17-03-18 03:35:04.984 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:35:04.984 -07 000000501 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:35:05.264 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 397 ms.
17-03-18 03:35:05.264 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:35:05.264 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:05.264 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 03:35:05.274 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:35:05.274 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:05.274 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:05.274 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:05.274 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 526 ms.
17-03-18 03:35:05.284 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 529 ms.
17-03-18 03:35:05.334 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:35:05.334 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:35:05.374 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:05.374 -07 000000438 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:35:05.384 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:05.384 -07 000000611 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:05.384 -07 000000611 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:35:05.384 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.832 mm, average velocity = 2.144 mm/sec
17-03-18 03:35:06.334 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:06.334 -07 000000501 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:35:06.344 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:06.344 -07 000000611 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:06.374 -07 000000611 INF: Y Motor: After move to 60.742607, error = -0.009697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:06.374 -07 000000611 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:06.374 -07 000000611 INF: Y Motor: Moved to 60.7329 after 1428 ms (table move)
17-03-18 03:35:06.374 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133175 mm (DAC = 29092)
17-03-18 03:35:06.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.374 -07 000000611 INF: FPGA: Recv ZSGSRD 30018
17-03-18 03:35:06.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:35:06.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.384 -07 000000606 INF: FPGA: Recv ZSGSRD 30015
17-03-18 03:35:06.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.394 -07 000000590 INF: FPGA: Recv ZSGSRD 30027
17-03-18 03:35:06.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.404 -07 000000424 INF: FPGA: Recv ZSGSRD 30026
17-03-18 03:35:06.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.414 -07 000000569 INF: FPGA: Recv ZSGSRD 30019
17-03-18 03:35:06.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.424 -07 000000444 INF: FPGA: Recv ZSGSRD 30020
17-03-18 03:35:06.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.434 -07 000000438 INF: FPGA: Recv ZSGSRD 30021
17-03-18 03:35:06.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.444 -07 000000611 INF: FPGA: Recv ZSGSRD 30015
17-03-18 03:35:06.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.454 -07 000000569 INF: FPGA: Recv ZSGSRD 30018
17-03-18 03:35:06.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.464 -07 000000444 INF: FPGA: Recv ZSGSRD 30021
17-03-18 03:35:06.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.474 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:06.474 -07 000000569 INF: FPGA: Recv ZPIEZORD 25507
17-03-18 03:35:06.484 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.484 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.439 V. Piezo Error = -9.9 V.
17-03-18 03:35:06.484 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.2 um, Read 10 ADC samples: Avg = 30020 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30020 (-132.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30015 (-132.4 uncal um), Max = 30027 (-132.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:35:06.484 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30020, posNoise = 7, negNoise = 5
17-03-18 03:35:06.484 -07 000000610 INF: Z Motor: After move to -0.133175, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:06.484 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 106 ms (allowed 150 ms), total time = 1536 ms
17-03-18 03:35:06.484 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:06.534 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1588 ms
17-03-18 03:35:06.534 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:06.534 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73291015625, Z-position -0.133178200506799. ----------
17-03-18 03:35:06.534 -07 000000610 INF: Cycle	114	Tile	2	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:06.534 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28915, sync = True, waitForSettling = True)
17-03-18 03:35:06.534 -07 000000610 INF: Z Motor: Moving to -0.132364 mm, started at -0.133178 mm, distance = 0.81 um
17-03-18 03:35:06.534 -07 000000610 INF: FPGA: Xmit ZDACW 28915\n [Z Motor]
17-03-18 03:35:06.534 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:35:06.544 -07 000000610 INF: FPGA: 'ZDACW 28915' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:06.544 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:06.544 -07 000000424 INF: FPGA: Recv ZDACR 28915
17-03-18 03:35:06.554 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.554 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:06.584 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:06.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:06.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.704 -07 000000592 INF: FPGA: Recv ZSGSRD 29895
17-03-18 03:35:06.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.714 -07 000000590 INF: FPGA: Recv ZSGSRD 29899
17-03-18 03:35:06.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.724 -07 000000592 INF: FPGA: Recv ZSGSRD 29899
17-03-18 03:35:06.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.734 -07 000000444 INF: FPGA: Recv ZSGSRD 29893
17-03-18 03:35:06.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.744 -07 000000611 INF: FPGA: Recv ZSGSRD 29894
17-03-18 03:35:06.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.754 -07 000000569 INF: FPGA: Recv ZSGSRD 29891
17-03-18 03:35:06.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.764 -07 000000611 INF: FPGA: Recv ZSGSRD 29893
17-03-18 03:35:06.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.774 -07 000000438 INF: FPGA: Recv ZSGSRD 29892
17-03-18 03:35:06.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.784 -07 000000592 INF: FPGA: Recv ZSGSRD 29884
17-03-18 03:35:06.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:06.794 -07 000000606 INF: FPGA: Recv ZSGSRD 29900
17-03-18 03:35:06.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.804 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:06.804 -07 000000592 INF: FPGA: Recv ZPIEZORD 25335
17-03-18 03:35:06.814 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:06.814 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.412 V. Piezo Error = -10.0 V.
17-03-18 03:35:06.814 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29894 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29894 (-131.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29884 (-131.5 uncal um), Max = 29900 (-131.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:35:06.814 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29894, posNoise = 6, negNoise = 10
17-03-18 03:35:06.814 -07 000000610 INF: Z Motor: After move to -0.132364, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:06.814 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:35:06.814 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:06.814 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:06.814 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:06.814 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:06.814 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:06.814 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:06.814 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:06.814 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:06.814 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:06.814 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:06.814 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:06.814 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:06.824 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:35:06.824 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:06.824 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:06.824 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:06.834 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:35:06.834 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:35:06.834 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:35:06.834 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:35:06.834 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 29092 150\n [Camera]
17-03-18 03:35:07.034 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:07.444 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:07.444 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:07.444 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:07.444 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:07.444 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:07.454 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:07.454 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:07.454 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:35:07.454 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:07.454 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:35:07.634 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29092 792
17-03-18 03:35:07.784 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:07.844 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 393 ms.
17-03-18 03:35:07.844 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:35:07.844 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:07.844 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 397 ms.
17-03-18 03:35:07.844 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:35:07.844 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:07.844 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:07.844 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:35:07.854 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:35:07.864 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 03:35:07.984 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1140
17-03-18 03:35:07.984 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1140
17-03-18 03:35:07.984 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:07.984 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:07.984 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 1094749800, 0x0, 391868352) start.
17-03-18 03:35:07.994 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1140
17-03-18 03:35:07.994 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1140
17-03-18 03:35:07.994 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:07.994 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:07.994 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:35:08.174 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:35:08.174 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:08.174 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 29092 150' command took 2 ms to send, 1329 ms to get response, and 1339 ms overall
17-03-18 03:35:08.184 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.133085
17-03-18 03:35:08.184 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13308 mm
17-03-18 03:35:08.184 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:08.184 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 29072, sync = True, waitForSettling = False)
17-03-18 03:35:08.184 -07 000000444 INF: Z Motor: Moving to -0.133083 mm, started at -0.132369 mm, distance = -0.71 um
17-03-18 03:35:08.184 -07 000000444 INF: FPGA: Xmit ZDACW 29072\n [Z Motor]
17-03-18 03:35:08.184 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:35:08.184 -07 000000606 INF: Y Motor: Moving to 61.5726 mm, started at 60.7329 mm, delta = 0.8397 mm
17-03-18 03:35:08.184 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 03:35:08.194 -07 000000444 INF: FPGA: 'ZDACW 29072' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:35:08.194 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:08.194 -07 000000424 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:35:08.204 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:35:08.204 -07 000000606 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:08.204 -07 000000606 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:08.204 -07 000000606 INF: Y Motor: Moving 1344 steps-20
17-03-18 03:35:08.204 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:08.204 -07 000000512 INF: FPGA: Recv ZDACR 29072
17-03-18 03:35:08.214 -07 000000444 INF: FPGA: 'ZDACR' command took 3 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:35:08.214 -07 000000444 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 03:35:08.214 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:08.384 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 1094749800, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:35:08.384 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:35:08.384 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:08.394 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 03:35:08.394 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:35:08.394 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:08.394 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:08.394 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:35:08.394 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:08.404 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 03:35:08.584 -07 000000611 INF: FPGA: Recv YMVTILE
17-03-18 03:35:08.584 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 03:35:08.634 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:08.634 -07 000000569 INF: FPGA: Recv YRDPOS 126082
17-03-18 03:35:08.644 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:08.644 -07 000000606 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:08.644 -07 000000606 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:35:08.644 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.840 mm, average velocity = 2.181 mm/sec
17-03-18 03:35:09.384 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.012614,
17-03-18 03:35:09.594 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:09.594 -07 000000438 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:35:09.604 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:09.604 -07 000000606 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:09.624 -07 000000606 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:09.624 -07 000000606 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:35:09.624 -07 000000606 INF: Y Motor: Moved to 61.5640 after 1444 ms (table move)
17-03-18 03:35:09.634 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133083 mm (DAC = 29072)
17-03-18 03:35:09.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.634 -07 000000606 INF: FPGA: Recv ZSGSRD 29999
17-03-18 03:35:09.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:35:09.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.644 -07 000000606 INF: FPGA: Recv ZSGSRD 30005
17-03-18 03:35:09.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:09.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.654 -07 000000606 INF: FPGA: Recv ZSGSRD 30011
17-03-18 03:35:09.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:09.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.664 -07 000000590 INF: FPGA: Recv ZSGSRD 30014
17-03-18 03:35:09.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:09.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.674 -07 000000590 INF: FPGA: Recv ZSGSRD 30011
17-03-18 03:35:09.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:09.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.684 -07 000000590 INF: FPGA: Recv ZSGSRD 30002
17-03-18 03:35:09.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:09.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.714 -07 000000592 INF: FPGA: Recv ZSGSRD 30006
17-03-18 03:35:09.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:35:09.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.744 -07 000000592 INF: FPGA: Recv ZSGSRD 30013
17-03-18 03:35:09.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:35:09.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.754 -07 000000569 INF: FPGA: Recv ZSGSRD 30008
17-03-18 03:35:09.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:09.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.774 -07 000000444 INF: FPGA: Recv ZSGSRD 30004
17-03-18 03:35:09.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:35:09.784 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:09.784 -07 000000579 INF: FPGA: Recv ZPIEZORD 25527
17-03-18 03:35:09.794 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:09.794 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.436 V. Piezo Error = -9.8 V.
17-03-18 03:35:09.794 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30007 (-132.3 uncal um), Error = 0.8 uncal um, Median = 30007 (-132.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29999 (-132.3 uncal um), Max = 30014 (-132.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:35:09.794 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30007, posNoise = 7, negNoise = 8
17-03-18 03:35:09.794 -07 000000610 INF: Z Motor: After move to -0.133083, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:09.794 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 159 ms (allowed 150 ms), total time = 1606 ms
17-03-18 03:35:09.794 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 159 ms, longer than max expected time of 150 ms
17-03-18 03:35:09.794 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1608 ms
17-03-18 03:35:09.794 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:09.794 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.133094685748956. ----------
17-03-18 03:35:09.794 -07 000000610 INF: Cycle	114	Tile	3	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:09.794 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28896, sync = True, waitForSettling = True)
17-03-18 03:35:09.794 -07 000000610 INF: Z Motor: Moving to -0.132277 mm, started at -0.133095 mm, distance = 0.82 um
17-03-18 03:35:09.794 -07 000000610 INF: FPGA: Xmit ZDACW 28896\n [Z Motor]
17-03-18 03:35:09.804 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:35:09.804 -07 000000610 INF: FPGA: 'ZDACW 28896' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:35:09.804 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:09.804 -07 000000444 INF: FPGA: Recv ZDACR 28896
17-03-18 03:35:09.814 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:09.814 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:09.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.964 -07 000000438 INF: FPGA: Recv ZSGSRD 29882
17-03-18 03:35:09.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:09.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.974 -07 000000438 INF: FPGA: Recv ZSGSRD 29882
17-03-18 03:35:09.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:09.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.984 -07 000000444 INF: FPGA: Recv ZSGSRD 29875
17-03-18 03:35:09.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:09.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:09.994 -07 000000444 INF: FPGA: Recv ZSGSRD 29879
17-03-18 03:35:10.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:10.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:10.004 -07 000000438 INF: FPGA: Recv ZSGSRD 29877
17-03-18 03:35:10.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:10.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:10.014 -07 000000438 INF: FPGA: Recv ZSGSRD 29881
17-03-18 03:35:10.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:10.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:10.024 -07 000000438 INF: FPGA: Recv ZSGSRD 29880
17-03-18 03:35:10.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:10.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:10.034 -07 000000438 INF: FPGA: Recv ZSGSRD 29881
17-03-18 03:35:10.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:10.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:10.044 -07 000000438 INF: FPGA: Recv ZSGSRD 29885
17-03-18 03:35:10.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:10.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:10.054 -07 000000611 INF: FPGA: Recv ZSGSRD 29881
17-03-18 03:35:10.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:10.064 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:10.064 -07 000000501 INF: FPGA: Recv ZPIEZORD 25335
17-03-18 03:35:10.074 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:10.074 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.409 V. Piezo Error = -10.0 V.
17-03-18 03:35:10.074 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29880 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29881 (-131.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29875 (-131.5 uncal um), Max = 29885 (-131.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:35:10.074 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29880, posNoise = 5, negNoise = 5
17-03-18 03:35:10.074 -07 000000610 INF: Z Motor: After move to -0.132277, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:10.074 -07 000000610 INF: Z Motor: MoveAbsStepped took 273 ms)
17-03-18 03:35:10.074 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:10.074 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:10.074 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:10.074 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:10.074 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:10.074 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:10.074 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:10.074 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:10.074 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:10.074 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:10.074 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:10.074 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:10.084 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:35:10.084 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:10.084 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:10.084 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:10.094 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:35:10.094 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:35:10.094 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:35:10.094 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:35:10.104 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 29072 150\n [Camera]
17-03-18 03:35:10.304 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:10.704 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:10.704 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:10.704 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:10.704 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:10.704 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) start.
17-03-18 03:35:10.714 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:10.714 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:10.714 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:10.714 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:10.714 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:35:10.904 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29072 792
17-03-18 03:35:11.044 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:11.084 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:35:11.084 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:35:11.084 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:11.084 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:11.094 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:35:11.094 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:35:11.094 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:11.094 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:11.094 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:35:11.094 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:35:11.244 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:11.244 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:11.244 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:11.244 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:11.244 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:35:11.244 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:11.244 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:11.244 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:11.244 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:11.254 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:35:11.434 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:35:11.434 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:11.434 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 29072 150' command took 2 ms to send, 1328 ms to get response, and 1337 ms overall
17-03-18 03:35:11.434 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.132678
17-03-18 03:35:11.444 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13268 mm
17-03-18 03:35:11.444 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:11.444 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:35:11.444 -07 000000424 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 03:35:11.444 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:11.444 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 28984, sync = True, waitForSettling = False)
17-03-18 03:35:11.444 -07 000000501 INF: Z Motor: Moving to -0.132680 mm, started at -0.132279 mm, distance = -0.40 um
17-03-18 03:35:11.444 -07 000000512 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:35:11.454 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:35:11.454 -07 000000424 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:11.454 -07 000000424 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:11.454 -07 000000424 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:35:11.454 -07 000000501 INF: FPGA: Xmit ZDACW 28984\n [Z Motor]
17-03-18 03:35:11.454 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:35:11.464 -07 000000501 INF: FPGA: 'ZDACW 28984' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:35:11.464 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:11.464 -07 000000444 INF: FPGA: Recv ZDACR 28984
17-03-18 03:35:11.474 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:11.474 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:11.474 -07 000000501 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 03:35:11.584 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:11.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:11.624 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:35:11.624 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:35:11.624 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:11.634 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:35:11.634 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:35:11.634 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:11.634 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:11.634 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:35:11.634 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:11.644 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:35:11.844 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:35:11.844 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall
17-03-18 03:35:11.894 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:11.894 -07 000000590 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:35:11.904 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:11.904 -07 000000424 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:11.904 -07 000000424 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:35:11.904 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.839 mm, average velocity = 2.118 mm/sec
17-03-18 03:35:12.854 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:12.854 -07 000000569 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:35:12.864 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:12.864 -07 000000424 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:12.884 -07 000000424 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:12.884 -07 000000424 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:12.884 -07 000000424 INF: Y Motor: Moved to 62.3955 after 1446 ms (table move)
17-03-18 03:35:12.894 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132680 mm (DAC = 28984)
17-03-18 03:35:12.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:12.894 -07 000000512 INF: FPGA: Recv ZSGSRD 29943
17-03-18 03:35:12.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:35:12.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:12.904 -07 000000424 INF: FPGA: Recv ZSGSRD 29945
17-03-18 03:35:12.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:12.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:12.914 -07 000000590 INF: FPGA: Recv ZSGSRD 29942
17-03-18 03:35:12.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:12.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:12.924 -07 000000438 INF: FPGA: Recv ZSGSRD 29945
17-03-18 03:35:12.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:12.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:12.934 -07 000000444 INF: FPGA: Recv ZSGSRD 29946
17-03-18 03:35:12.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:12.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:12.944 -07 000000579 INF: FPGA: Recv ZSGSRD 29940
17-03-18 03:35:12.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:12.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:12.954 -07 000000501 INF: FPGA: Recv ZSGSRD 29941
17-03-18 03:35:12.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:12.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:12.964 -07 000000438 INF: FPGA: Recv ZSGSRD 29941
17-03-18 03:35:12.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:12.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:12.974 -07 000000512 INF: FPGA: Recv ZSGSRD 29949
17-03-18 03:35:12.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:12.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:12.984 -07 000000579 INF: FPGA: Recv ZSGSRD 29945
17-03-18 03:35:12.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:12.994 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:12.994 -07 000000424 INF: FPGA: Recv ZPIEZORD 25469
17-03-18 03:35:13.004 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.004 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.423 V. Piezo Error = -9.8 V.
17-03-18 03:35:13.004 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29944 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29944 (-131.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29940 (-131.9 uncal um), Max = 29949 (-131.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:35:13.004 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29944, posNoise = 5, negNoise = 4
17-03-18 03:35:13.004 -07 000000610 INF: Z Motor: After move to -0.132680, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:13.004 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 109 ms (allowed 150 ms), total time = 1556 ms
17-03-18 03:35:13.004 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:13.054 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1609 ms
17-03-18 03:35:13.054 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:13.054 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.132689960384025. ----------
17-03-18 03:35:13.054 -07 000000610 INF: Cycle	114	Tile	4	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:13.054 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28807, sync = True, waitForSettling = True)
17-03-18 03:35:13.054 -07 000000610 INF: Z Motor: Moving to -0.131870 mm, started at -0.132690 mm, distance = 0.82 um
17-03-18 03:35:13.054 -07 000000610 INF: FPGA: Xmit ZDACW 28807\n [Z Motor]
17-03-18 03:35:13.054 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:35:13.064 -07 000000610 INF: FPGA: 'ZDACW 28807' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:13.064 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:13.064 -07 000000438 INF: FPGA: Recv ZDACR 28807
17-03-18 03:35:13.074 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.074 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:13.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:13.224 -07 000000579 INF: FPGA: Recv ZSGSRD 29827
17-03-18 03:35:13.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:13.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:13.234 -07 000000592 INF: FPGA: Recv ZSGSRD 29821
17-03-18 03:35:13.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:13.244 -07 000000569 INF: FPGA: Recv ZSGSRD 29819
17-03-18 03:35:13.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:13.254 -07 000000569 INF: FPGA: Recv ZSGSRD 29813
17-03-18 03:35:13.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:13.264 -07 000000424 INF: FPGA: Recv ZSGSRD 29819
17-03-18 03:35:13.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:13.274 -07 000000569 INF: FPGA: Recv ZSGSRD 29814
17-03-18 03:35:13.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:13.284 -07 000000590 INF: FPGA: Recv ZSGSRD 29812
17-03-18 03:35:13.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:13.294 -07 000000438 INF: FPGA: Recv ZSGSRD 29821
17-03-18 03:35:13.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:13.304 -07 000000590 INF: FPGA: Recv ZSGSRD 29823
17-03-18 03:35:13.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:13.314 -07 000000501 INF: FPGA: Recv ZSGSRD 29817
17-03-18 03:35:13.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.324 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:13.324 -07 000000512 INF: FPGA: Recv ZPIEZORD 25265
17-03-18 03:35:13.334 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:13.334 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.396 V. Piezo Error = -10.0 V.
17-03-18 03:35:13.334 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29819 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29819 (-131.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29812 (-131.1 uncal um), Max = 29827 (-131.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:35:13.334 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29819, posNoise = 8, negNoise = 7
17-03-18 03:35:13.334 -07 000000610 INF: Z Motor: After move to -0.131870, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:13.334 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:35:13.334 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:13.334 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:13.334 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:13.334 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:13.334 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:13.334 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:13.334 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:13.334 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:13.334 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:35:13.334 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:13.334 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:13.334 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:13.344 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:13.344 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:13.344 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:35:13.344 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:13.354 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:35:13.354 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:35:13.354 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 03:35:13.354 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 03:35:13.354 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28984 150\n [Camera]
17-03-18 03:35:13.554 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:13.964 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:13.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:13.964 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:13.964 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:13.964 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:35:13.964 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:13.964 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:13.964 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:13.964 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:13.964 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:35:14.154 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28984 792
17-03-18 03:35:14.304 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:14.344 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:35:14.344 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:35:14.344 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:14.344 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:35:14.344 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:35:14.344 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:14.344 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:35:14.344 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:35:14.344 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:35:14.354 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:35:14.504 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:14.504 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:14.504 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:14.504 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:14.504 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:35:14.504 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:14.504 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:14.504 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:14.504 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:14.504 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 03:35:14.694 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:35:14.694 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:14.694 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28984 150' command took 2 ms to send, 1333 ms to get response, and 1338 ms overall
17-03-18 03:35:14.694 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:35:14.694 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 5 at Y-position 62.3955078125, Z-Position -0.131886933866305. ------
17-03-18 03:35:14.694 -07 000000438 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:35:14.694 -07 000000579 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13852 mm
17-03-18 03:35:14.694 -07 000000579 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:14.704 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:35:14.704 -07 000000501 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 03:35:14.704 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:14.704 -07 000000590 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:35:14.704 -07 000000438 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:35:14.704 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 30260, sync = True, waitForSettling = False)
17-03-18 03:35:14.704 -07 000000444 INF: Z Motor: Moving to -0.138521 mm, started at -0.131887 mm, distance = -6.63 um
17-03-18 03:35:14.704 -07 000000591 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:35:14.714 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:35:14.714 -07 000000501 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:14.714 -07 000000501 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:14.714 -07 000000501 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:35:14.714 -07 000000444 INF: FPGA: Xmit ZDACW 30260\n [Z Motor]
17-03-18 03:35:14.714 -07 000000585 INF: FPGA: Recv ZDACW
17-03-18 03:35:14.724 -07 000000438 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:35:14.724 -07 000000444 INF: FPGA: 'ZDACW 30260' command took 1 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:35:14.734 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:14.744 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:14.744 -07 000000626 INF: FPGA: Recv ZDACR 30260
17-03-18 03:35:14.754 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:35:14.754 -07 000000444 INF: Z Motor: MoveAbsStepped took 45 ms (did NOT wait for settling yet))
17-03-18 03:35:14.764 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.004458,
17-03-18 03:35:14.884 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:35:14.884 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:35:14.884 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:14.884 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:35:14.884 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:35:14.884 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:14.894 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:14.894 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:14.894 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:35:14.894 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:35:14.924 -07 000000444 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:35:14.924 -07 000000438 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 217 ms overall
17-03-18 03:35:15.104 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:35:15.104 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:35:15.154 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:15.164 -07 000000569 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:35:15.164 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:35:15.164 -07 000000501 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:15.164 -07 000000501 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 03:35:15.164 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.837 mm, average velocity = 2.103 mm/sec
17-03-18 03:35:16.114 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:16.114 -07 000000611 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:35:16.124 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:16.124 -07 000000501 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:16.144 -07 000000501 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:16.144 -07 000000501 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:16.144 -07 000000501 INF: Y Motor: Moved to 63.2241 after 1448 ms (table move)
17-03-18 03:35:16.154 -07 000000579 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138521 mm (DAC = 30260)
17-03-18 03:35:16.154 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:16.154 -07 000000502 INF: FPGA: Recv ZSGSRD 30857
17-03-18 03:35:16.164 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:35:16.164 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:16.164 -07 000000501 INF: FPGA: Recv ZSGSRD 30847
17-03-18 03:35:16.174 -07 000000579 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:16.174 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:16.174 -07 000000592 INF: FPGA: Recv ZSGSRD 30852
17-03-18 03:35:16.184 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:16.184 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:16.184 -07 000000591 INF: FPGA: Recv ZSGSRD 30859
17-03-18 03:35:16.194 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:16.194 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:16.194 -07 000000444 INF: FPGA: Recv ZSGSRD 30847
17-03-18 03:35:16.204 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:16.204 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:16.204 -07 000000606 INF: FPGA: Recv ZSGSRD 30863
17-03-18 03:35:16.214 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:16.214 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:16.214 -07 000000461 INF: FPGA: Recv ZSGSRD 30849
17-03-18 03:35:16.224 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:16.224 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:16.224 -07 000000591 INF: FPGA: Recv ZSGSRD 30847
17-03-18 03:35:16.234 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:16.234 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:16.234 -07 000000590 INF: FPGA: Recv ZSGSRD 30854
17-03-18 03:35:16.244 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:16.244 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:16.244 -07 000000611 INF: FPGA: Recv ZSGSRD 30851
17-03-18 03:35:16.254 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:16.254 -07 000000579 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:16.254 -07 000000501 INF: FPGA: Recv ZPIEZORD 26675
17-03-18 03:35:16.264 -07 000000579 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:16.264 -07 000000579 INF: Z Motor: Piezo is near 37.0 V (nominally 0 to 100 V), expect near 46.2 V, since DAC is at 4.617 V. Piezo Error = -9.2 V.
17-03-18 03:35:16.264 -07 000000579 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.5 um, Read 10 ADC samples: Avg = 30853 (-137.7 uncal um), Error = 0.8 uncal um, Median = 30852 (-137.7 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 30847 (-137.7 uncal um), Max = 30863 (-137.8 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:35:16.264 -07 000000579 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30853, posNoise = 10, negNoise = 6
17-03-18 03:35:16.264 -07 000000579 INF: Z Motor: After move to -0.138521, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:16.264 -07 000000579 INF: Z Motor: Settle wait time = 1448 ms, measure time = 107 ms (allowed 150 ms), total time = 1555 ms
17-03-18 03:35:16.264 -07 000000579 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:16.314 -07 000000579 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-18 03:35:16.314 -07 000000579 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:16.314 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:16.314 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:16.314 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:16.314 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:16.314 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:35:16.314 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:16.314 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:16.314 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:35:16.324 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:35:16.324 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:35:16.334 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:35:16.334 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:35:16.334 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:35:16.384 -07 000000512 INF: FPGA: Recv @CAMSNAP turning led on 41
17-03-18 03:35:16.584 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:16.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:16.684 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 341
17-03-18 03:35:16.684 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 341
17-03-18 03:35:16.684 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:35:16.684 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 596199184, 0x0, 559484976) start.
17-03-18 03:35:16.714 -07 000000592 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:35:16.724 -07 000000606 INF: FPGA: Recv CAMSNAP
17-03-18 03:35:16.724 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 385 ms overall
17-03-18 03:35:16.804 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 596199184, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:35:16.804 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:16.814 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:35:16.814 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:35:16.824 -07 000000626 INF: Autofocus start
17-03-18 03:35:16.824 -07 000000626 INF: MeasureProfile start
17-03-18 03:35:16.824 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:35:16.824 -07 000000579 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:35:16.834 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:16.834 -07 000000501 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:35:16.834 -07 000000626 INF: MeasureProfile done
17-03-18 03:35:16.834 -07 000000626 INF: X=32  Z correction [um]=0.1299841
17-03-18 03:35:16.834 -07 000000626 INF: Autofocus finished
17-03-18 03:35:17.034 -07 000000569 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:35:17.034 -07 000000501 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:35:17.034 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.138529569220886. ----------
17-03-18 03:35:17.034 -07 000000610 INF: Cycle	114	Tile	5	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:17.044 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28801, sync = True, waitForSettling = True)
17-03-18 03:35:17.044 -07 000000610 INF: Z Motor: Moving to -0.131843 mm, started at -0.138530 mm, distance = 6.69 um
17-03-18 03:35:17.044 -07 000000610 INF: FPGA: Xmit ZDACW 28801\n [Z Motor]
17-03-18 03:35:17.044 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:35:17.054 -07 000000610 INF: FPGA: 'ZDACW 28801' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:35:17.054 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:17.054 -07 000000626 INF: FPGA: Recv ZDACR 28801
17-03-18 03:35:17.064 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:17.064 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:17.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:17.214 -07 000000579 INF: FPGA: Recv ZSGSRD 29818
17-03-18 03:35:17.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:17.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:17.224 -07 000000626 INF: FPGA: Recv ZSGSRD 29817
17-03-18 03:35:17.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:17.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:17.234 -07 000000579 INF: FPGA: Recv ZSGSRD 29816
17-03-18 03:35:17.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:17.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:17.244 -07 000000626 INF: FPGA: Recv ZSGSRD 29809
17-03-18 03:35:17.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:17.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:17.254 -07 000000626 INF: FPGA: Recv ZSGSRD 29812
17-03-18 03:35:17.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:17.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:17.264 -07 000000579 INF: FPGA: Recv ZSGSRD 29814
17-03-18 03:35:17.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:17.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:17.274 -07 000000579 INF: FPGA: Recv ZSGSRD 29814
17-03-18 03:35:17.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:17.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:17.284 -07 000000626 INF: FPGA: Recv ZSGSRD 29814
17-03-18 03:35:17.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:17.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:17.294 -07 000000579 INF: FPGA: Recv ZSGSRD 29812
17-03-18 03:35:17.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:17.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:17.304 -07 000000626 INF: FPGA: Recv ZSGSRD 29814
17-03-18 03:35:17.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:17.314 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:17.314 -07 000000626 INF: FPGA: Recv ZPIEZORD 25293
17-03-18 03:35:17.324 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:17.324 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.395 V. Piezo Error = -9.9 V.
17-03-18 03:35:17.324 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29814 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29814 (-131.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29809 (-131.0 uncal um), Max = 29818 (-131.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:35:17.324 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29814, posNoise = 4, negNoise = 5
17-03-18 03:35:17.324 -07 000000610 INF: Z Motor: After move to -0.131843, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:17.324 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:35:17.324 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:17.324 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:17.324 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:17.324 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:17.324 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:17.324 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:17.324 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:17.324 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:17.324 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:35:17.324 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:17.324 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:17.324 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:17.334 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:17.334 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:17.334 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:35:17.334 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:17.344 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:35:17.344 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:35:17.344 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:35:17.344 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:35:17.344 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28978 150\n [Camera]
17-03-18 03:35:17.544 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:17.954 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:17.954 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:17.954 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:17.954 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:17.954 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 03:35:17.954 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:17.954 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:17.954 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:17.954 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:17.954 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 03:35:18.144 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28978 792
17-03-18 03:35:18.294 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:18.334 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:35:18.334 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:35:18.334 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:18.334 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:35:18.334 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:35:18.334 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:18.344 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:35:18.344 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:35:18.344 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:35:18.344 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:35:18.494 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1140
17-03-18 03:35:18.494 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1140
17-03-18 03:35:18.494 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:18.494 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:18.494 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-18 03:35:18.494 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1140
17-03-18 03:35:18.494 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1140
17-03-18 03:35:18.494 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:18.494 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:18.494 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-18 03:35:18.684 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:35:18.684 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:18.684 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28978 150' command took 2 ms to send, 1331 ms to get response, and 1338 ms overall
17-03-18 03:35:18.684 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.132269
17-03-18 03:35:18.684 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13227 mm
17-03-18 03:35:18.684 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:18.684 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:35:18.684 -07 000000606 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 03:35:18.684 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:18.684 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 28894, sync = True, waitForSettling = False)
17-03-18 03:35:18.684 -07 000000424 INF: Z Motor: Moving to -0.132268 mm, started at -0.131855 mm, distance = -0.41 um
17-03-18 03:35:18.684 -07 000000590 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:35:18.694 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:18.694 -07 000000606 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:18.694 -07 000000606 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:18.694 -07 000000606 INF: Y Motor: Moving 1342 steps-17
17-03-18 03:35:18.694 -07 000000424 INF: FPGA: Xmit ZDACW 28894\n [Z Motor]
17-03-18 03:35:18.694 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:35:18.704 -07 000000424 INF: FPGA: 'ZDACW 28894' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:35:18.704 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:18.704 -07 000000512 INF: FPGA: Recv ZDACR 28894
17-03-18 03:35:18.714 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:18.714 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:18.714 -07 000000424 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 03:35:18.874 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:35:18.874 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:35:18.874 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:18.874 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:35:18.874 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:35:18.874 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:18.874 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:35:18.884 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:35:18.884 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:35:18.884 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:35:19.084 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:35:19.084 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:35:19.134 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:19.134 -07 000000444 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:35:19.144 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:19.144 -07 000000606 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:19.144 -07 000000606 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-18 03:35:19.144 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.838 mm, average velocity = 2.107 mm/sec
17-03-18 03:35:20.094 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:20.094 -07 000000424 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:35:20.104 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:20.104 -07 000000606 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:20.124 -07 000000606 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:20.124 -07 000000606 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:20.124 -07 000000606 INF: Y Motor: Moved to 64.0571 after 1440 ms (table move)
17-03-18 03:35:20.124 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132268 mm (DAC = 28894)
17-03-18 03:35:20.134 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.003063,
17-03-18 03:35:20.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.154 -07 000000501 INF: FPGA: Recv ZSGSRD 29878
17-03-18 03:35:20.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-18 03:35:20.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.164 -07 000000501 INF: FPGA: Recv ZSGSRD 29882
17-03-18 03:35:20.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.184 -07 000000512 INF: FPGA: Recv ZSGSRD 29880
17-03-18 03:35:20.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:35:20.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.194 -07 000000569 INF: FPGA: Recv ZSGSRD 29876
17-03-18 03:35:20.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.224 -07 000000590 INF: FPGA: Recv ZSGSRD 29877
17-03-18 03:35:20.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:35:20.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.234 -07 000000501 INF: FPGA: Recv ZSGSRD 29885
17-03-18 03:35:20.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.244 -07 000000590 INF: FPGA: Recv ZSGSRD 29879
17-03-18 03:35:20.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.254 -07 000000590 INF: FPGA: Recv ZSGSRD 29881
17-03-18 03:35:20.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.264 -07 000000590 INF: FPGA: Recv ZSGSRD 29880
17-03-18 03:35:20.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.274 -07 000000579 INF: FPGA: Recv ZSGSRD 29874
17-03-18 03:35:20.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.284 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:20.284 -07 000000590 INF: FPGA: Recv ZPIEZORD 25404
17-03-18 03:35:20.294 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.294 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.409 V. Piezo Error = -9.8 V.
17-03-18 03:35:20.294 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29879 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29880 (-131.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29874 (-131.5 uncal um), Max = 29885 (-131.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:35:20.294 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29879, posNoise = 6, negNoise = 5
17-03-18 03:35:20.294 -07 000000610 INF: Z Motor: After move to -0.132268, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:20.294 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 162 ms (allowed 150 ms), total time = 1604 ms
17-03-18 03:35:20.294 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 162 ms, longer than max expected time of 150 ms
17-03-18 03:35:20.294 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms
17-03-18 03:35:20.294 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:20.294 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.132272386594811. ----------
17-03-18 03:35:20.294 -07 000000610 INF: Cycle	114	Tile	6	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:20.294 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28717, sync = True, waitForSettling = True)
17-03-18 03:35:20.294 -07 000000610 INF: Z Motor: Moving to -0.131458 mm, started at -0.132272 mm, distance = 0.81 um
17-03-18 03:35:20.294 -07 000000610 INF: FPGA: Xmit ZDACW 28717\n [Z Motor]
17-03-18 03:35:20.294 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:35:20.304 -07 000000610 INF: FPGA: 'ZDACW 28717' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:20.304 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:20.304 -07 000000626 INF: FPGA: Recv ZDACR 28717
17-03-18 03:35:20.314 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.314 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:20.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.464 -07 000000579 INF: FPGA: Recv ZSGSRD 29757
17-03-18 03:35:20.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.474 -07 000000590 INF: FPGA: Recv ZSGSRD 29754
17-03-18 03:35:20.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.504 -07 000000606 INF: FPGA: Recv ZSGSRD 29752
17-03-18 03:35:20.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:35:20.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.514 -07 000000606 INF: FPGA: Recv ZSGSRD 29753
17-03-18 03:35:20.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.534 -07 000000424 INF: FPGA: Recv ZSGSRD 29756
17-03-18 03:35:20.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:35:20.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.544 -07 000000590 INF: FPGA: Recv ZSGSRD 29751
17-03-18 03:35:20.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.554 -07 000000590 INF: FPGA: Recv ZSGSRD 29750
17-03-18 03:35:20.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.564 -07 000000424 INF: FPGA: Recv ZSGSRD 29749
17-03-18 03:35:20.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.574 -07 000000590 INF: FPGA: Recv ZSGSRD 29751
17-03-18 03:35:20.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:20.584 -07 000000424 INF: FPGA: Recv ZSGSRD 29755
17-03-18 03:35:20.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.594 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:20.594 -07 000000606 INF: FPGA: Recv ZPIEZORD 25217
17-03-18 03:35:20.604 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:20.604 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.382 V. Piezo Error = -9.9 V.
17-03-18 03:35:20.604 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.5 um, Read 10 ADC samples: Avg = 29753 (-130.7 uncal um), Error = 0.8 uncal um, Median = 29752 (-130.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29749 (-130.7 uncal um), Max = 29757 (-130.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:35:20.604 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29753, posNoise = 4, negNoise = 4
17-03-18 03:35:20.604 -07 000000610 INF: Z Motor: After move to -0.131458, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:20.604 -07 000000610 INF: Z Motor: MoveAbsStepped took 305 ms)
17-03-18 03:35:20.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:20.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:20.604 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:20.604 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:20.604 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:20.604 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:20.604 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:20.604 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:20.604 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:20.604 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:20.604 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:20.604 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:20.604 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:35:20.604 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:20.614 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:35:20.614 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:20.624 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 03:35:20.624 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:35:20.624 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 03:35:20.624 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:35:20.634 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28894 150\n [Camera]
17-03-18 03:35:20.824 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:21.234 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:21.234 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:21.234 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:21.234 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:21.234 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start.
17-03-18 03:35:21.244 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:21.244 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:21.244 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:21.244 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:21.244 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-18 03:35:21.434 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28894 792
17-03-18 03:35:21.584 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 945
17-03-18 03:35:21.594 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:21.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:21.614 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:35:21.614 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:35:21.614 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:21.614 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:35:21.614 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:35:21.614 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:21.614 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:21.624 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:35:21.624 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:21.624 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:35:21.774 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:21.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:21.774 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:21.774 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:21.774 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start.
17-03-18 03:35:21.784 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:21.784 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:21.784 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:21.784 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:21.784 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start.
17-03-18 03:35:21.964 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1330
17-03-18 03:35:21.964 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:21.964 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28894 150' command took 2 ms to send, 1328 ms to get response, and 1337 ms overall
17-03-18 03:35:21.974 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.132072
17-03-18 03:35:21.974 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13207 mm
17-03-18 03:35:21.974 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:21.974 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:35:21.974 -07 000000444 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 03:35:21.974 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:21.974 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 28851, sync = True, waitForSettling = False)
17-03-18 03:35:21.974 -07 000000579 INF: Z Motor: Moving to -0.132071 mm, started at -0.131463 mm, distance = -0.61 um
17-03-18 03:35:21.984 -07 000000579 INF: FPGA: Xmit ZDACW 28851\n [Z Motor]
17-03-18 03:35:21.984 -07 000000606 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:35:21.984 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 5 ms overall
17-03-18 03:35:21.984 -07 000000444 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:21.984 -07 000000444 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:21.984 -07 000000444 INF: Y Motor: Moving 1337 steps-11
17-03-18 03:35:21.984 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:35:21.994 -07 000000579 INF: FPGA: 'ZDACW 28851' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:35:21.994 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:22.004 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:22.004 -07 000000424 INF: FPGA: Recv ZDACR 28851
17-03-18 03:35:22.014 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:35:22.014 -07 000000579 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet))
17-03-18 03:35:22.164 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:35:22.164 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:35:22.164 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:22.164 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:22.164 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:35:22.164 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:35:22.164 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:35:22.164 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:22.174 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:22.174 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:35:22.364 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 03:35:22.364 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 03:35:22.414 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:22.414 -07 000000461 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:35:22.424 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:22.424 -07 000000444 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:22.424 -07 000000444 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:35:22.424 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.835 mm, average velocity = 2.164 mm/sec
17-03-18 03:35:23.374 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:23.374 -07 000000501 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:35:23.384 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:23.384 -07 000000444 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:23.404 -07 000000444 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:23.404 -07 000000444 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:23.414 -07 000000444 INF: Y Motor: Moved to 64.8789 after 1434 ms (table move)
17-03-18 03:35:23.414 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132071 mm (DAC = 28851)
17-03-18 03:35:23.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.414 -07 000000444 INF: FPGA: Recv ZSGSRD 29847
17-03-18 03:35:23.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:35:23.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.424 -07 000000444 INF: FPGA: Recv ZSGSRD 29847
17-03-18 03:35:23.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.434 -07 000000444 INF: FPGA: Recv ZSGSRD 29851
17-03-18 03:35:23.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.444 -07 000000444 INF: FPGA: Recv ZSGSRD 29856
17-03-18 03:35:23.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.454 -07 000000444 INF: FPGA: Recv ZSGSRD 29850
17-03-18 03:35:23.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.464 -07 000000626 INF: FPGA: Recv ZSGSRD 29848
17-03-18 03:35:23.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.474 -07 000000626 INF: FPGA: Recv ZSGSRD 29847
17-03-18 03:35:23.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.484 -07 000000626 INF: FPGA: Recv ZSGSRD 29850
17-03-18 03:35:23.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.494 -07 000000444 INF: FPGA: Recv ZSGSRD 29846
17-03-18 03:35:23.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.504 -07 000000444 INF: FPGA: Recv ZSGSRD 29848
17-03-18 03:35:23.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.514 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:23.514 -07 000000626 INF: FPGA: Recv ZPIEZORD 25375
17-03-18 03:35:23.524 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.524 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.402 V. Piezo Error = -9.8 V.
17-03-18 03:35:23.524 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.1 um, Read 10 ADC samples: Avg = 29849 (-131.3 uncal um), Error = 0.8 uncal um, Median = 29848 (-131.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29846 (-131.3 uncal um), Max = 29856 (-131.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:35:23.524 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29849, posNoise = 7, negNoise = 3
17-03-18 03:35:23.524 -07 000000610 INF: Z Motor: After move to -0.132071, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:23.524 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 110 ms (allowed 150 ms), total time = 1545 ms
17-03-18 03:35:23.524 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:23.564 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1586 ms
17-03-18 03:35:23.564 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:23.564 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.132079660230558. ----------
17-03-18 03:35:23.564 -07 000000610 INF: Cycle	114	Tile	7	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:23.564 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28674, sync = True, waitForSettling = True)
17-03-18 03:35:23.564 -07 000000610 INF: Z Motor: Moving to -0.131261 mm, started at -0.132080 mm, distance = 0.82 um
17-03-18 03:35:23.564 -07 000000610 INF: FPGA: Xmit ZDACW 28674\n [Z Motor]
17-03-18 03:35:23.564 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:35:23.574 -07 000000610 INF: FPGA: 'ZDACW 28674' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:23.574 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:23.574 -07 000000579 INF: FPGA: Recv ZDACR 28674
17-03-18 03:35:23.584 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.584 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:23.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.734 -07 000000579 INF: FPGA: Recv ZSGSRD 29718
17-03-18 03:35:23.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.744 -07 000000512 INF: FPGA: Recv ZSGSRD 29722
17-03-18 03:35:23.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.754 -07 000000512 INF: FPGA: Recv ZSGSRD 29726
17-03-18 03:35:23.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.764 -07 000000579 INF: FPGA: Recv ZSGSRD 29726
17-03-18 03:35:23.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.774 -07 000000512 INF: FPGA: Recv ZSGSRD 29725
17-03-18 03:35:23.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.784 -07 000000579 INF: FPGA: Recv ZSGSRD 29718
17-03-18 03:35:23.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.794 -07 000000579 INF: FPGA: Recv ZSGSRD 29723
17-03-18 03:35:23.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.804 -07 000000512 INF: FPGA: Recv ZSGSRD 29720
17-03-18 03:35:23.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.814 -07 000000579 INF: FPGA: Recv ZSGSRD 29719
17-03-18 03:35:23.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:23.824 -07 000000579 INF: FPGA: Recv ZSGSRD 29724
17-03-18 03:35:23.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.834 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:23.834 -07 000000512 INF: FPGA: Recv ZPIEZORD 25205
17-03-18 03:35:23.844 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:23.844 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.375 V. Piezo Error = -9.9 V.
17-03-18 03:35:23.844 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29722 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29722 (-130.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29718 (-130.5 uncal um), Max = 29726 (-130.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:35:23.844 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29722, posNoise = 4, negNoise = 4
17-03-18 03:35:23.844 -07 000000610 INF: Z Motor: After move to -0.131261, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:23.844 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:35:23.844 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:23.844 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:23.844 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:23.844 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:23.844 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:23.844 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:23.844 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:23.844 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:23.844 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:23.844 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:23.844 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:23.844 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:23.854 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:35:23.854 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:23.854 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:23.854 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:23.864 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:35:23.864 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:35:23.864 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:35:23.864 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:35:23.864 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28851 150\n [Camera]
17-03-18 03:35:24.064 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:24.474 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:24.474 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:24.474 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:24.474 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:24.474 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-18 03:35:24.484 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:24.484 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:24.484 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:24.484 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:24.484 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-18 03:35:24.664 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28851 792
17-03-18 03:35:24.814 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:24.854 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:35:24.854 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:35:24.854 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:24.854 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:24.854 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:35:24.864 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:35:24.864 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:35:24.864 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:24.864 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:24.874 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:35:25.014 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:25.014 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:25.014 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:25.014 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:25.014 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) start.
17-03-18 03:35:25.014 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:25.014 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:25.014 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:25.174 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:25.174 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:35:25.204 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1330
17-03-18 03:35:25.204 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:25.204 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28851 150' command took 2 ms to send, 1326 ms to get response, and 1337 ms overall
17-03-18 03:35:25.204 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.131899
17-03-18 03:35:25.204 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13190 mm
17-03-18 03:35:25.204 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:25.214 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:35:25.214 -07 000000512 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-18 03:35:25.214 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 28813, sync = True, waitForSettling = False)
17-03-18 03:35:25.214 -07 000000444 INF: Z Motor: Moving to -0.131897 mm, started at -0.131264 mm, distance = -0.63 um
17-03-18 03:35:25.214 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:25.214 -07 000000424 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:35:25.224 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:35:25.224 -07 000000512 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:25.224 -07 000000512 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:25.224 -07 000000512 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:35:25.234 -07 000000444 INF: FPGA: Xmit ZDACW 28813\n [Z Motor]
17-03-18 03:35:25.234 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:35:25.244 -07 000000444 INF: FPGA: 'ZDACW 28813' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:35:25.244 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:25.254 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:25.254 -07 000000424 INF: FPGA: Recv ZDACR 28813
17-03-18 03:35:25.264 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:35:25.264 -07 000000444 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-18 03:35:25.414 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) end. Duration was 401 ms.
17-03-18 03:35:25.414 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 03:35:25.414 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:25.424 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:25.424 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 03:35:25.544 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.004458,
17-03-18 03:35:25.544 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:35:25.544 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:35:25.544 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:25.554 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:25.554 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 540 ms.
17-03-18 03:35:25.614 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 03:35:25.614 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 398 ms overall
17-03-18 03:35:25.664 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:25.664 -07 000000579 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:35:25.674 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:25.674 -07 000000512 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:25.674 -07 000000512 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:35:25.674 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.844 mm, average velocity = 2.120 mm/sec
17-03-18 03:35:26.594 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:26.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:26.624 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:26.624 -07 000000606 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:35:26.634 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.634 -07 000000512 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:26.664 -07 000000512 INF: Y Motor: After move to 65.722610, error = -0.008743, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:26.664 -07 000000512 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:26.664 -07 000000512 INF: Y Motor: Moved to 65.7139 after 1452 ms (table move)
17-03-18 03:35:26.664 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131897 mm (DAC = 28813)
17-03-18 03:35:26.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:26.664 -07 000000424 INF: FPGA: Recv ZSGSRD 29816
17-03-18 03:35:26.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:26.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:26.674 -07 000000424 INF: FPGA: Recv ZSGSRD 29821
17-03-18 03:35:26.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:26.684 -07 000000590 INF: FPGA: Recv ZSGSRD 29827
17-03-18 03:35:26.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:26.694 -07 000000424 INF: FPGA: Recv ZSGSRD 29819
17-03-18 03:35:26.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:26.704 -07 000000424 INF: FPGA: Recv ZSGSRD 29824
17-03-18 03:35:26.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:26.714 -07 000000590 INF: FPGA: Recv ZSGSRD 29818
17-03-18 03:35:26.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:26.724 -07 000000424 INF: FPGA: Recv ZSGSRD 29820
17-03-18 03:35:26.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:26.734 -07 000000501 INF: FPGA: Recv ZSGSRD 29817
17-03-18 03:35:26.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:26.744 -07 000000424 INF: FPGA: Recv ZSGSRD 29817
17-03-18 03:35:26.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:26.754 -07 000000424 INF: FPGA: Recv ZSGSRD 29828
17-03-18 03:35:26.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.764 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:26.764 -07 000000424 INF: FPGA: Recv ZPIEZORD 25362
17-03-18 03:35:26.774 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.774 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.397 V. Piezo Error = -9.8 V.
17-03-18 03:35:26.774 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29821 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29820 (-131.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29816 (-131.1 uncal um), Max = 29828 (-131.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:35:26.774 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29821, posNoise = 7, negNoise = 5
17-03-18 03:35:26.774 -07 000000610 INF: Z Motor: After move to -0.131897, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:26.774 -07 000000610 INF: Z Motor: Settle wait time = 1454 ms, measure time = 105 ms (allowed 150 ms), total time = 1559 ms
17-03-18 03:35:26.774 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:26.824 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1610 ms
17-03-18 03:35:26.824 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:26.824 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.7138671875, Z-position -0.131899782290589. ----------
17-03-18 03:35:26.824 -07 000000610 INF: Cycle	114	Tile	8	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:26.824 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28637, sync = True, waitForSettling = True)
17-03-18 03:35:26.824 -07 000000610 INF: Z Motor: Moving to -0.131092 mm, started at -0.131900 mm, distance = 0.81 um
17-03-18 03:35:26.824 -07 000000610 INF: FPGA: Xmit ZDACW 28637\n [Z Motor]
17-03-18 03:35:26.824 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:35:26.834 -07 000000610 INF: FPGA: 'ZDACW 28637' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:26.834 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:26.834 -07 000000590 INF: FPGA: Recv ZDACR 28637
17-03-18 03:35:26.844 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:26.844 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:26.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:26.994 -07 000000626 INF: FPGA: Recv ZSGSRD 29702
17-03-18 03:35:27.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:27.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:27.004 -07 000000626 INF: FPGA: Recv ZSGSRD 29698
17-03-18 03:35:27.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:27.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:27.014 -07 000000626 INF: FPGA: Recv ZSGSRD 29698
17-03-18 03:35:27.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:27.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:27.024 -07 000000626 INF: FPGA: Recv ZSGSRD 29698
17-03-18 03:35:27.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:27.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:27.034 -07 000000626 INF: FPGA: Recv ZSGSRD 29697
17-03-18 03:35:27.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:27.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:27.044 -07 000000579 INF: FPGA: Recv ZSGSRD 29699
17-03-18 03:35:27.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:27.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:27.054 -07 000000579 INF: FPGA: Recv ZSGSRD 29690
17-03-18 03:35:27.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:27.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:27.064 -07 000000626 INF: FPGA: Recv ZSGSRD 29696
17-03-18 03:35:27.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:27.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:27.074 -07 000000579 INF: FPGA: Recv ZSGSRD 29698
17-03-18 03:35:27.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:27.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:27.084 -07 000000626 INF: FPGA: Recv ZSGSRD 29700
17-03-18 03:35:27.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:27.094 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:27.094 -07 000000626 INF: FPGA: Recv ZPIEZORD 25185
17-03-18 03:35:27.104 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:27.104 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.370 V. Piezo Error = -9.9 V.
17-03-18 03:35:27.104 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.1 um, Read 10 ADC samples: Avg = 29698 (-130.3 uncal um), Error = 0.8 uncal um, Median = 29698 (-130.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29690 (-130.3 uncal um), Max = 29702 (-130.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:35:27.104 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29698, posNoise = 4, negNoise = 8
17-03-18 03:35:27.104 -07 000000610 INF: Z Motor: After move to -0.131092, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:27.104 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:35:27.104 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:27.104 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:27.104 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:27.104 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:27.104 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:27.104 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:27.104 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:27.104 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:27.104 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:27.104 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:27.104 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:27.104 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:27.114 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:35:27.114 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:27.114 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:35:27.114 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:27.124 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:35:27.124 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:35:27.124 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:35:27.124 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:35:27.124 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28813 150\n [Camera]
17-03-18 03:35:27.324 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:27.734 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:27.734 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:27.734 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:27.734 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:27.734 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:27.744 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:27.744 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:27.744 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:35:27.744 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:27.744 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:35:27.924 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28813 792
17-03-18 03:35:28.074 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:28.114 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:35:28.114 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:35:28.114 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:28.124 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:35:28.124 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:35:28.124 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:28.124 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:35:28.124 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:35:28.124 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:28.134 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:35:28.274 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:28.274 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:28.274 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:28.274 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:28.274 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:28.274 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:28.394 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:28.394 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:35:28.404 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:28.404 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:35:28.464 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:35:28.464 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:28.464 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28813 150' command took 2 ms to send, 1327 ms to get response, and 1337 ms overall
17-03-18 03:35:28.464 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:35:28.464 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 9 at Y-position 65.7138671875, Z-Position -0.131109604197152. ------
17-03-18 03:35:28.474 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:35:28.474 -07 000000606 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13742 mm
17-03-18 03:35:28.474 -07 000000606 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:28.474 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:35:28.474 -07 000000579 INF: Y Motor: Moving to 66.5526 mm, started at 65.7139 mm, delta = 0.8387 mm
17-03-18 03:35:28.474 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 30020, sync = True, waitForSettling = False)
17-03-18 03:35:28.474 -07 000000569 INF: Z Motor: Moving to -0.137423 mm, started at -0.131110 mm, distance = -6.31 um
17-03-18 03:35:28.474 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:35:28.484 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:35:28.484 -07 000000569 INF: FPGA: Xmit ZDACW 30020\n [Z Motor]
17-03-18 03:35:28.484 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:35:28.494 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:28.494 -07 000000569 INF: FPGA: 'ZDACW 30020' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:35:28.494 -07 000000444 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:35:28.504 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:35:28.504 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 03:35:28.504 -07 000000579 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:28.504 -07 000000579 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:28.504 -07 000000579 INF: Y Motor: Moving 1341 steps-18
17-03-18 03:35:28.514 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:28.514 -07 000000444 INF: FPGA: Recv ZDACR 30020
17-03-18 03:35:28.524 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:28.524 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:35:28.524 -07 000000569 INF: Z Motor: MoveAbsStepped took 43 ms (did NOT wait for settling yet))
17-03-18 03:35:28.704 -07 000000512 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:35:28.704 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:35:28.774 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:35:28.774 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:35:28.774 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:28.774 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:35:28.774 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:35:28.774 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:28.784 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:28.784 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 505 ms.
17-03-18 03:35:28.784 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:28.794 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 510 ms.
17-03-18 03:35:28.894 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:35:28.894 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 389 ms overall
17-03-18 03:35:28.944 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:28.944 -07 000000502 INF: FPGA: Recv YRDPOS 136273
17-03-18 03:35:28.954 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:28.954 -07 000000579 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:28.954 -07 000000579 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 03:35:28.954 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.839 mm, average velocity = 2.156 mm/sec
17-03-18 03:35:29.904 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:29.904 -07 000000626 INF: FPGA: Recv YRDPOS 136273
17-03-18 03:35:29.914 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:29.914 -07 000000579 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:29.944 -07 000000579 INF: Y Motor: After move to 66.552605, error = -0.013054, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:29.944 -07 000000579 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:29.944 -07 000000579 INF: Y Motor: Moved to 66.5396 after 1464 ms (table move)
17-03-18 03:35:29.944 -07 000000606 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137423 mm (DAC = 30020)
17-03-18 03:35:29.944 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:29.944 -07 000000579 INF: FPGA: Recv ZSGSRD 30688
17-03-18 03:35:29.954 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:35:29.954 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:29.954 -07 000000461 INF: FPGA: Recv ZSGSRD 30680
17-03-18 03:35:29.964 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:29.964 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:29.964 -07 000000461 INF: FPGA: Recv ZSGSRD 30680
17-03-18 03:35:29.974 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:29.974 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:29.974 -07 000000461 INF: FPGA: Recv ZSGSRD 30684
17-03-18 03:35:29.984 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:29.984 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:29.984 -07 000000579 INF: FPGA: Recv ZSGSRD 30686
17-03-18 03:35:29.994 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:29.994 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:29.994 -07 000000424 INF: FPGA: Recv ZSGSRD 30682
17-03-18 03:35:30.004 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:30.004 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:30.004 -07 000000502 INF: FPGA: Recv ZSGSRD 30680
17-03-18 03:35:30.014 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:30.014 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:30.014 -07 000000502 INF: FPGA: Recv ZSGSRD 30674
17-03-18 03:35:30.024 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:30.024 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:30.024 -07 000000502 INF: FPGA: Recv ZSGSRD 30682
17-03-18 03:35:30.034 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:30.034 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:30.034 -07 000000502 INF: FPGA: Recv ZSGSRD 30685
17-03-18 03:35:30.044 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:30.044 -07 000000606 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:30.044 -07 000000424 INF: FPGA: Recv ZPIEZORD 26523
17-03-18 03:35:30.054 -07 000000606 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:30.054 -07 000000606 INF: Z Motor: Piezo is near 36.7 V (nominally 0 to 100 V), expect near 45.8 V, since DAC is at 4.581 V. Piezo Error = -9.1 V.
17-03-18 03:35:30.054 -07 000000606 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.4 um, Read 10 ADC samples: Avg = 30682 (-136.6 uncal um), Error = 0.8 uncal um, Median = 30682 (-136.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30674 (-136.6 uncal um), Max = 30688 (-136.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:35:30.054 -07 000000606 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30682, posNoise = 6, negNoise = 8
17-03-18 03:35:30.054 -07 000000606 INF: Z Motor: After move to -0.137423, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:30.054 -07 000000606 INF: Z Motor: Settle wait time = 1467 ms, measure time = 106 ms (allowed 150 ms), total time = 1573 ms
17-03-18 03:35:30.054 -07 000000606 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:30.104 -07 000000606 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1626 ms
17-03-18 03:35:30.104 -07 000000606 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:30.104 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:30.104 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:30.104 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:30.104 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:30.104 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:35:30.104 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:30.104 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:30.104 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:35:30.114 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:35:30.114 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:35:30.124 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:35:30.124 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 03:35:30.124 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:35:30.174 -07 000000590 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:35:30.464 -07 000000590 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:35:30.464 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:35:30.474 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:35:30.474 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610472208, 0x0, 559484976) start.
17-03-18 03:35:30.504 -07 000000502 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:35:30.504 -07 000000590 INF: FPGA: Recv CAMSNAP
17-03-18 03:35:30.514 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 379 ms to get response, and 384 ms overall
17-03-18 03:35:30.594 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610472208, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 03:35:30.594 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:30.594 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:35:30.594 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 127 ms.
17-03-18 03:35:30.614 -07 000000461 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:35:30.614 -07 000000501 INF: Autofocus start
17-03-18 03:35:30.614 -07 000000501 INF: MeasureProfile start
17-03-18 03:35:30.614 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:35:30.624 -07 000000461 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:35:30.624 -07 000000461 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:35:30.624 -07 000000501 INF: MeasureProfile done
17-03-18 03:35:30.624 -07 000000501 INF: X=16  Z correction [um]=0.0530179
17-03-18 03:35:30.624 -07 000000501 INF: Autofocus finished
17-03-18 03:35:30.824 -07 000000444 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:35:30.824 -07 000000461 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:35:30.824 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53955078125, Z-position -0.137431028944645. ----------
17-03-18 03:35:30.824 -07 000000610 INF: Cycle	114	Tile	9	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:30.834 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28545, sync = True, waitForSettling = True)
17-03-18 03:35:30.834 -07 000000610 INF: Z Motor: Moving to -0.130671 mm, started at -0.137431 mm, distance = 6.76 um
17-03-18 03:35:30.834 -07 000000610 INF: FPGA: Xmit ZDACW 28545\n [Z Motor]
17-03-18 03:35:30.834 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:35:30.844 -07 000000610 INF: FPGA: 'ZDACW 28545' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:30.844 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:30.844 -07 000000626 INF: FPGA: Recv ZDACR 28545
17-03-18 03:35:30.854 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:30.854 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:30.914 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.96762,
17-03-18 03:35:31.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:31.004 -07 000000438 INF: FPGA: Recv ZSGSRD 29628
17-03-18 03:35:31.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:31.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:31.014 -07 000000461 INF: FPGA: Recv ZSGSRD 29636
17-03-18 03:35:31.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:31.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:31.024 -07 000000461 INF: FPGA: Recv ZSGSRD 29630
17-03-18 03:35:31.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:31.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:31.034 -07 000000438 INF: FPGA: Recv ZSGSRD 29628
17-03-18 03:35:31.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:31.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:31.044 -07 000000438 INF: FPGA: Recv ZSGSRD 29632
17-03-18 03:35:31.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:31.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:31.054 -07 000000438 INF: FPGA: Recv ZSGSRD 29630
17-03-18 03:35:31.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:31.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:31.064 -07 000000438 INF: FPGA: Recv ZSGSRD 29634
17-03-18 03:35:31.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:31.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:31.074 -07 000000461 INF: FPGA: Recv ZSGSRD 29631
17-03-18 03:35:31.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:31.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:31.084 -07 000000461 INF: FPGA: Recv ZSGSRD 29631
17-03-18 03:35:31.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:31.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:31.094 -07 000000461 INF: FPGA: Recv ZSGSRD 29635
17-03-18 03:35:31.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:31.104 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:31.104 -07 000000461 INF: FPGA: Recv ZPIEZORD 25116
17-03-18 03:35:31.114 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:31.114 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.356 V. Piezo Error = -9.9 V.
17-03-18 03:35:31.114 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29632 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29631 (-129.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29628 (-129.9 uncal um), Max = 29636 (-129.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:35:31.114 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29632, posNoise = 4, negNoise = 4
17-03-18 03:35:31.114 -07 000000610 INF: Z Motor: After move to -0.130671, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:31.114 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:35:31.114 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:31.114 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:31.114 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:31.114 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:31.114 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:31.114 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:31.114 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:31.114 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:31.114 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:31.114 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:31.114 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:31.114 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:31.124 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:35:31.124 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:31.124 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:35:31.124 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:31.134 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:35:31.134 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:35:31.134 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:35:31.134 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:35:31.134 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28721 150\n [Camera]
17-03-18 03:35:31.334 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:31.594 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:31.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:31.744 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:31.744 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:31.744 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:31.744 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:31.754 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:31.754 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:31.754 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:31.754 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:35:31.764 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:31.764 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 03:35:31.934 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28721 792
17-03-18 03:35:32.094 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:32.124 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 374 ms.
17-03-18 03:35:32.124 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-18 03:35:32.124 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:32.134 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:32.134 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:35:32.134 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:35:32.134 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:35:32.134 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:32.134 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:32.144 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:35:32.284 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:32.284 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:32.284 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:32.294 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:32.294 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:32.294 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:32.294 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:32.294 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:35:32.294 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:32.294 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 03:35:32.474 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1330
17-03-18 03:35:32.474 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:32.474 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28721 150' command took 2 ms to send, 1327 ms to get response, and 1337 ms overall
17-03-18 03:35:32.474 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131591
17-03-18 03:35:32.474 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13159 mm
17-03-18 03:35:32.484 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:32.484 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:35:32.484 -07 000000501 INF: Y Motor: Moving to 67.3826 mm, started at 66.5396 mm, delta = 0.8431 mm
17-03-18 03:35:32.484 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:32.484 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 28746, sync = True, waitForSettling = False)
17-03-18 03:35:32.484 -07 000000461 INF: Z Motor: Moving to -0.131591 mm, started at -0.130686 mm, distance = -0.91 um
17-03-18 03:35:32.484 -07 000000424 INF: FPGA: Recv YRDPOS 136273
17-03-18 03:35:32.494 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:35:32.494 -07 000000501 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:32.494 -07 000000501 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:32.494 -07 000000501 INF: Y Motor: Moving 1349 steps-27
17-03-18 03:35:32.494 -07 000000461 INF: FPGA: Xmit ZDACW 28746\n [Z Motor]
17-03-18 03:35:32.494 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:35:32.504 -07 000000461 INF: FPGA: 'ZDACW 28746' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:35:32.504 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:32.504 -07 000000626 INF: FPGA: Recv ZDACR 28746
17-03-18 03:35:32.514 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:32.514 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:32.514 -07 000000461 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 03:35:32.674 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:35:32.674 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:35:32.674 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:32.684 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:35:32.684 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:35:32.684 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:32.684 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:32.684 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:32.684 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:35:32.694 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:35:32.894 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:35:32.894 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 401 ms overall
17-03-18 03:35:32.944 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:32.954 -07 000000424 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:35:32.954 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:32.954 -07 000000501 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:32.954 -07 000000501 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-18 03:35:32.954 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 401 ms, distance = 0.843 mm, average velocity = 2.102 mm/sec
17-03-18 03:35:33.904 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:33.904 -07 000000606 INF: FPGA: Recv YRDPOS 137979
17-03-18 03:35:33.914 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:33.914 -07 000000501 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:33.934 -07 000000501 INF: Y Motor: After move to 67.382607, error = -0.010048, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:33.934 -07 000000501 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:35:33.944 -07 000000501 INF: Y Motor: Moved to 67.3726 after 1457 ms (table move)
17-03-18 03:35:33.944 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131591 mm (DAC = 28746)
17-03-18 03:35:33.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:33.944 -07 000000626 INF: FPGA: Recv ZSGSRD 29780
17-03-18 03:35:33.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:35:33.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:33.954 -07 000000611 INF: FPGA: Recv ZSGSRD 29775
17-03-18 03:35:33.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:33.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:33.964 -07 000000512 INF: FPGA: Recv ZSGSRD 29778
17-03-18 03:35:33.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:33.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:33.974 -07 000000626 INF: FPGA: Recv ZSGSRD 29770
17-03-18 03:35:33.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:33.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:33.984 -07 000000590 INF: FPGA: Recv ZSGSRD 29781
17-03-18 03:35:33.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:33.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:33.994 -07 000000626 INF: FPGA: Recv ZSGSRD 29772
17-03-18 03:35:34.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.004 -07 000000592 INF: FPGA: Recv ZSGSRD 29764
17-03-18 03:35:34.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.014 -07 000000590 INF: FPGA: Recv ZSGSRD 29772
17-03-18 03:35:34.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.024 -07 000000626 INF: FPGA: Recv ZSGSRD 29777
17-03-18 03:35:34.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.034 -07 000000592 INF: FPGA: Recv ZSGSRD 29779
17-03-18 03:35:34.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.044 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:34.044 -07 000000590 INF: FPGA: Recv ZPIEZORD 25358
17-03-18 03:35:34.054 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.054 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.386 V. Piezo Error = -9.7 V.
17-03-18 03:35:34.054 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.6 um, Read 10 ADC samples: Avg = 29775 (-130.8 uncal um), Error = 0.8 uncal um, Median = 29776 (-130.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29764 (-130.8 uncal um), Max = 29781 (-130.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 03:35:34.054 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29775, posNoise = 6, negNoise = 11
17-03-18 03:35:34.054 -07 000000610 INF: Z Motor: After move to -0.131591, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:34.054 -07 000000610 INF: Z Motor: Settle wait time = 1460 ms, measure time = 107 ms (allowed 150 ms), total time = 1567 ms
17-03-18 03:35:34.054 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:34.104 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1620 ms
17-03-18 03:35:34.104 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:34.104 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37255859375, Z-position -0.131604268532067. ----------
17-03-18 03:35:34.104 -07 000000610 INF: Cycle	114	Tile	10	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:34.104 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28569, sync = True, waitForSettling = True)
17-03-18 03:35:34.104 -07 000000610 INF: Z Motor: Moving to -0.130780 mm, started at -0.131604 mm, distance = 0.82 um
17-03-18 03:35:34.104 -07 000000610 INF: FPGA: Xmit ZDACW 28569\n [Z Motor]
17-03-18 03:35:34.104 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 03:35:34.114 -07 000000610 INF: FPGA: 'ZDACW 28569' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:34.114 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:34.114 -07 000000626 INF: FPGA: Recv ZDACR 28569
17-03-18 03:35:34.124 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:35:34.124 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:34.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.274 -07 000000438 INF: FPGA: Recv ZSGSRD 29653
17-03-18 03:35:34.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:34.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.284 -07 000000501 INF: FPGA: Recv ZSGSRD 29648
17-03-18 03:35:34.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.294 -07 000000438 INF: FPGA: Recv ZSGSRD 29644
17-03-18 03:35:34.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.304 -07 000000424 INF: FPGA: Recv ZSGSRD 29645
17-03-18 03:35:34.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.314 -07 000000626 INF: FPGA: Recv ZSGSRD 29651
17-03-18 03:35:34.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.324 -07 000000438 INF: FPGA: Recv ZSGSRD 29646
17-03-18 03:35:34.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:35:34.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.334 -07 000000512 INF: FPGA: Recv ZSGSRD 29648
17-03-18 03:35:34.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.344 -07 000000424 INF: FPGA: Recv ZSGSRD 29643
17-03-18 03:35:34.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.354 -07 000000438 INF: FPGA: Recv ZSGSRD 29653
17-03-18 03:35:34.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:34.364 -07 000000512 INF: FPGA: Recv ZSGSRD 29655
17-03-18 03:35:34.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.374 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:34.374 -07 000000424 INF: FPGA: Recv ZPIEZORD 25180
17-03-18 03:35:34.384 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:34.384 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.359 V. Piezo Error = -9.8 V.
17-03-18 03:35:34.384 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.8 um, Read 10 ADC samples: Avg = 29649 (-130.0 uncal um), Error = 0.8 uncal um, Median = 29648 (-130.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29643 (-130.0 uncal um), Max = 29655 (-130.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:35:34.384 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29649, posNoise = 6, negNoise = 6
17-03-18 03:35:34.384 -07 000000610 INF: Z Motor: After move to -0.130780, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:34.384 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:35:34.384 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:34.384 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:34.384 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:34.384 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:34.384 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:34.384 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:34.384 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:34.384 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:34.384 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:34.384 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:34.384 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:34.384 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:34.384 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:35:34.384 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:34.394 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 5 ms.
17-03-18 03:35:34.394 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:34.394 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:35:34.394 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-18 03:35:34.404 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:35:34.404 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:35:34.404 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28746 150\n [Camera]
17-03-18 03:35:34.604 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:35.014 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:35.014 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:35.014 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:35.014 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:35.014 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:35:35.014 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:35.014 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:35.014 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:35.014 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:35.014 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1094749800, 0x0, 418435064) start.
17-03-18 03:35:35.204 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28746 792
17-03-18 03:35:35.354 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:35.394 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:35:35.394 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:35:35.394 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:35.394 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1094749800, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:35:35.394 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:35:35.394 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:35.394 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:35.394 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:35:35.394 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:35.404 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:35:35.544 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:35.544 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:35.554 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:35.554 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:35.554 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 03:35:35.554 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:35.554 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:35.554 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:35.554 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:35.554 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) start.
17-03-18 03:35:35.744 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:35:35.744 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:35.744 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28746 150' command took 2 ms to send, 1331 ms to get response, and 1337 ms overall
17-03-18 03:35:35.744 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.131062
17-03-18 03:35:35.744 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13106 mm
17-03-18 03:35:35.744 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:35.744 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:35:35.744 -07 000000461 INF: Y Motor: Moving to 68.2126 mm, started at 67.3726 mm, delta = 0.8400 mm
17-03-18 03:35:35.744 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 28631, sync = True, waitForSettling = False)
17-03-18 03:35:35.744 -07 000000590 INF: Z Motor: Moving to -0.131064 mm, started at -0.130795 mm, distance = -0.27 um
17-03-18 03:35:35.744 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:35.744 -07 000000626 INF: FPGA: Recv YRDPOS 137979
17-03-18 03:35:35.754 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:35.754 -07 000000461 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:35.754 -07 000000461 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:35.754 -07 000000461 INF: Y Motor: Moving 1344 steps-22
17-03-18 03:35:35.754 -07 000000590 INF: FPGA: Xmit ZDACW 28631\n [Z Motor]
17-03-18 03:35:35.754 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 03:35:35.764 -07 000000590 INF: FPGA: 'ZDACW 28631' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:35:35.764 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:35.764 -07 000000606 INF: FPGA: Recv ZDACR 28631
17-03-18 03:35:35.774 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:35.774 -07 000000590 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 03:35:35.774 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:35.934 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:35:35.934 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:35:35.934 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:35.934 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:35:35.934 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:35:35.934 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:35.934 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:35.934 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:35.944 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:35:35.944 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:35:36.144 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:35:36.144 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 398 ms overall
17-03-18 03:35:36.194 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:36.194 -07 000000424 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:35:36.204 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:36.204 -07 000000461 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:36.204 -07 000000461 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:35:36.204 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.111 mm/sec
17-03-18 03:35:36.394 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.007176,
17-03-18 03:35:36.584 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:36.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:37.154 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:37.154 -07 000000579 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:35:37.164 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:37.164 -07 000000461 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:37.184 -07 000000461 INF: Y Motor: After move to 68.212608, error = -0.007530, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:37.184 -07 000000461 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:37.184 -07 000000461 INF: Y Motor: Moved to 68.2051 after 1442 ms (table move)
17-03-18 03:35:37.184 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131064 mm (DAC = 28631)
17-03-18 03:35:37.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.194 -07 000000592 INF: FPGA: Recv ZSGSRD 29689
17-03-18 03:35:37.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:35:37.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.204 -07 000000592 INF: FPGA: Recv ZSGSRD 29694
17-03-18 03:35:37.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.214 -07 000000592 INF: FPGA: Recv ZSGSRD 29694
17-03-18 03:35:37.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.224 -07 000000592 INF: FPGA: Recv ZSGSRD 29696
17-03-18 03:35:37.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.234 -07 000000592 INF: FPGA: Recv ZSGSRD 29689
17-03-18 03:35:37.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.244 -07 000000592 INF: FPGA: Recv ZSGSRD 29689
17-03-18 03:35:37.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.254 -07 000000592 INF: FPGA: Recv ZSGSRD 29687
17-03-18 03:35:37.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.264 -07 000000592 INF: FPGA: Recv ZSGSRD 29688
17-03-18 03:35:37.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.274 -07 000000579 INF: FPGA: Recv ZSGSRD 29694
17-03-18 03:35:37.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.284 -07 000000424 INF: FPGA: Recv ZSGSRD 29690
17-03-18 03:35:37.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.294 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:37.294 -07 000000424 INF: FPGA: Recv ZPIEZORD 25202
17-03-18 03:35:37.304 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.304 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.369 V. Piezo Error = -9.9 V.
17-03-18 03:35:37.304 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.1 um, Read 10 ADC samples: Avg = 29691 (-130.3 uncal um), Error = 0.8 uncal um, Median = 29690 (-130.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29687 (-130.3 uncal um), Max = 29696 (-130.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:35:37.304 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29691, posNoise = 5, negNoise = 4
17-03-18 03:35:37.304 -07 000000610 INF: Z Motor: After move to -0.131064, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:37.304 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 110 ms (allowed 150 ms), total time = 1555 ms
17-03-18 03:35:37.304 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:37.344 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms
17-03-18 03:35:37.344 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:37.344 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.205078125, Z-position -0.13106463471216. ----------
17-03-18 03:35:37.344 -07 000000610 INF: Cycle	114	Tile	11	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:37.344 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28454, sync = True, waitForSettling = True)
17-03-18 03:35:37.344 -07 000000610 INF: Z Motor: Moving to -0.130254 mm, started at -0.131065 mm, distance = 0.81 um
17-03-18 03:35:37.344 -07 000000610 INF: FPGA: Xmit ZDACW 28454\n [Z Motor]
17-03-18 03:35:37.344 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:35:37.354 -07 000000610 INF: FPGA: 'ZDACW 28454' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:37.354 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:37.354 -07 000000606 INF: FPGA: Recv ZDACR 28454
17-03-18 03:35:37.364 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.364 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:37.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.514 -07 000000502 INF: FPGA: Recv ZSGSRD 29567
17-03-18 03:35:37.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:37.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.524 -07 000000424 INF: FPGA: Recv ZSGSRD 29569
17-03-18 03:35:37.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.534 -07 000000424 INF: FPGA: Recv ZSGSRD 29568
17-03-18 03:35:37.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.544 -07 000000461 INF: FPGA: Recv ZSGSRD 29567
17-03-18 03:35:37.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.554 -07 000000444 INF: FPGA: Recv ZSGSRD 29561
17-03-18 03:35:37.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.564 -07 000000444 INF: FPGA: Recv ZSGSRD 29566
17-03-18 03:35:37.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.574 -07 000000461 INF: FPGA: Recv ZSGSRD 29564
17-03-18 03:35:37.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.584 -07 000000461 INF: FPGA: Recv ZSGSRD 29564
17-03-18 03:35:37.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.594 -07 000000461 INF: FPGA: Recv ZSGSRD 29565
17-03-18 03:35:37.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:37.604 -07 000000461 INF: FPGA: Recv ZSGSRD 29561
17-03-18 03:35:37.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.614 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:37.614 -07 000000461 INF: FPGA: Recv ZPIEZORD 25011
17-03-18 03:35:37.624 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:37.624 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.342 V. Piezo Error = -10.0 V.
17-03-18 03:35:37.624 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.3 um, Read 10 ADC samples: Avg = 29565 (-129.5 uncal um), Error = 0.8 uncal um, Median = 29566 (-129.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29561 (-129.5 uncal um), Max = 29569 (-129.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:35:37.624 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29565, posNoise = 4, negNoise = 4
17-03-18 03:35:37.624 -07 000000610 INF: Z Motor: After move to -0.130254, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:37.624 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:35:37.624 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:37.624 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:37.624 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:37.624 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:37.624 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:37.624 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:37.624 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:37.624 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:37.624 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:37.624 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:37.624 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:37.624 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:37.634 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:35:37.634 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:37.634 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:37.634 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:37.644 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:35:37.644 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:35:37.644 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:35:37.644 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:35:37.654 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28631 150\n [Camera]
17-03-18 03:35:37.854 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:38.254 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:38.254 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:38.254 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:38.264 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:38.264 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:38.264 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:38.264 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:38.264 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:35:38.264 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:38.264 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:35:38.454 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28631 792
17-03-18 03:35:38.594 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:38.644 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:35:38.644 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:35:38.644 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:38.644 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:35:38.644 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:35:38.644 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:38.644 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:38.644 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:35:38.654 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:38.654 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:35:38.794 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:38.794 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:38.804 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:38.804 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:38.804 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:38.804 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:38.804 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:35:38.804 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:38.804 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:38.804 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:35:38.984 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:35:38.984 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:38.984 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28631 150' command took 2 ms to send, 1328 ms to get response, and 1338 ms overall
17-03-18 03:35:38.994 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.130972
17-03-18 03:35:38.994 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13097 mm
17-03-18 03:35:38.994 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:38.994 -07 000000592 INF: Z Motor: Entering MoveAbsStepped (DAC = 28611, sync = True, waitForSettling = False)
17-03-18 03:35:38.994 -07 000000592 INF: Z Motor: Moving to -0.130973 mm, started at -0.130255 mm, distance = -0.72 um
17-03-18 03:35:38.994 -07 000000592 INF: FPGA: Xmit ZDACW 28611\n [Z Motor]
17-03-18 03:35:38.994 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:35:38.994 -07 000000569 INF: Y Motor: Moving to 69.0426 mm, started at 68.2051 mm, delta = 0.8375 mm
17-03-18 03:35:38.994 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:35:39.004 -07 000000592 INF: FPGA: 'ZDACW 28611' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:35:39.004 -07 000000592 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:39.004 -07 000000611 INF: FPGA: Recv ZDACR 28611
17-03-18 03:35:39.014 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:39.014 -07 000000592 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:39.014 -07 000000592 INF: Z Motor: MoveAbsStepped took 15 ms (did NOT wait for settling yet))
17-03-18 03:35:39.014 -07 000000501 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:35:39.024 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-18 03:35:39.024 -07 000000569 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:39.024 -07 000000569 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:39.024 -07 000000569 INF: Y Motor: Moving 1340 steps-15
17-03-18 03:35:39.024 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:39.184 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:35:39.184 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:35:39.184 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:39.184 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:35:39.184 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:35:39.184 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:39.184 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:39.184 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:39.184 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:35:39.194 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:35:39.394 -07 000000592 INF: FPGA: Recv YMVTILE
17-03-18 03:35:39.394 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-18 03:35:39.464 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:39.464 -07 000000424 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:35:39.474 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:35:39.474 -07 000000569 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:39.474 -07 000000569 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:35:39.474 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.216 mm/sec
17-03-18 03:35:40.424 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:40.424 -07 000000424 INF: FPGA: Recv YRDPOS 141369
17-03-18 03:35:40.434 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:40.434 -07 000000569 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:40.454 -07 000000569 INF: Y Motor: After move to 69.042610, error = -0.014778, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:40.454 -07 000000569 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:35:40.454 -07 000000569 INF: Y Motor: Moved to 69.0278 after 1464 ms (table move)
17-03-18 03:35:40.464 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130973 mm (DAC = 28611)
17-03-18 03:35:40.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.464 -07 000000611 INF: FPGA: Recv ZSGSRD 29675
17-03-18 03:35:40.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:35:40.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.474 -07 000000461 INF: FPGA: Recv ZSGSRD 29682
17-03-18 03:35:40.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.484 -07 000000512 INF: FPGA: Recv ZSGSRD 29676
17-03-18 03:35:40.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.494 -07 000000424 INF: FPGA: Recv ZSGSRD 29680
17-03-18 03:35:40.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.504 -07 000000438 INF: FPGA: Recv ZSGSRD 29670
17-03-18 03:35:40.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.514 -07 000000590 INF: FPGA: Recv ZSGSRD 29674
17-03-18 03:35:40.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.524 -07 000000569 INF: FPGA: Recv ZSGSRD 29681
17-03-18 03:35:40.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.534 -07 000000502 INF: FPGA: Recv ZSGSRD 29675
17-03-18 03:35:40.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.544 -07 000000592 INF: FPGA: Recv ZSGSRD 29682
17-03-18 03:35:40.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.554 -07 000000590 INF: FPGA: Recv ZSGSRD 29677
17-03-18 03:35:40.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.564 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:40.564 -07 000000569 INF: FPGA: Recv ZPIEZORD 25220
17-03-18 03:35:40.574 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.574 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.366 V. Piezo Error = -9.8 V.
17-03-18 03:35:40.574 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.0 um, Read 10 ADC samples: Avg = 29677 (-130.2 uncal um), Error = 0.8 uncal um, Median = 29676 (-130.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29670 (-130.1 uncal um), Max = 29682 (-130.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:35:40.574 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29677, posNoise = 5, negNoise = 7
17-03-18 03:35:40.574 -07 000000610 INF: Z Motor: After move to -0.130973, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:40.574 -07 000000610 INF: Z Motor: Settle wait time = 1467 ms, measure time = 109 ms (allowed 150 ms), total time = 1576 ms
17-03-18 03:35:40.574 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:40.624 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1627 ms
17-03-18 03:35:40.624 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:40.624 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02783203125, Z-position -0.130974695742175. ----------
17-03-18 03:35:40.624 -07 000000610 INF: Cycle	114	Tile	12	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:40.624 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28434, sync = True, waitForSettling = True)
17-03-18 03:35:40.624 -07 000000610 INF: Z Motor: Moving to -0.130163 mm, started at -0.130975 mm, distance = 0.81 um
17-03-18 03:35:40.624 -07 000000610 INF: FPGA: Xmit ZDACW 28434\n [Z Motor]
17-03-18 03:35:40.624 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:35:40.634 -07 000000610 INF: FPGA: 'ZDACW 28434' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:40.634 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:40.634 -07 000000590 INF: FPGA: Recv ZDACR 28434
17-03-18 03:35:40.644 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.644 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:40.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.794 -07 000000569 INF: FPGA: Recv ZSGSRD 29552
17-03-18 03:35:40.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:40.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.804 -07 000000626 INF: FPGA: Recv ZSGSRD 29552
17-03-18 03:35:40.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.814 -07 000000579 INF: FPGA: Recv ZSGSRD 29552
17-03-18 03:35:40.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.824 -07 000000590 INF: FPGA: Recv ZSGSRD 29551
17-03-18 03:35:40.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.834 -07 000000592 INF: FPGA: Recv ZSGSRD 29547
17-03-18 03:35:40.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.844 -07 000000502 INF: FPGA: Recv ZSGSRD 29556
17-03-18 03:35:40.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.854 -07 000000501 INF: FPGA: Recv ZSGSRD 29549
17-03-18 03:35:40.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.864 -07 000000424 INF: FPGA: Recv ZSGSRD 29552
17-03-18 03:35:40.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.874 -07 000000569 INF: FPGA: Recv ZSGSRD 29555
17-03-18 03:35:40.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:40.884 -07 000000611 INF: FPGA: Recv ZSGSRD 29547
17-03-18 03:35:40.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.894 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:40.894 -07 000000592 INF: FPGA: Recv ZPIEZORD 25038
17-03-18 03:35:40.904 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:40.904 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.339 V. Piezo Error = -9.9 V.
17-03-18 03:35:40.904 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.2 um, Read 10 ADC samples: Avg = 29551 (-129.4 uncal um), Error = 0.8 uncal um, Median = 29552 (-129.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29547 (-129.4 uncal um), Max = 29556 (-129.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:35:40.904 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29551, posNoise = 5, negNoise = 4
17-03-18 03:35:40.904 -07 000000610 INF: Z Motor: After move to -0.130163, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:40.904 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:35:40.904 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:40.904 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:40.904 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:40.904 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:40.904 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:40.904 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:40.904 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:40.904 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:40.904 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:40.904 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:40.904 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:40.904 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:40.904 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:35:40.904 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:40.914 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:40.914 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:40.924 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:35:40.924 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:35:40.924 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:35:40.924 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:35:40.934 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28611 150\n [Camera]
17-03-18 03:35:41.134 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:41.534 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:41.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:41.534 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:41.544 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:41.544 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:41.544 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:41.544 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:41.544 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:35:41.544 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:41.544 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:35:41.584 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:41.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:41.734 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28611 792
17-03-18 03:35:41.754 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.011254,
17-03-18 03:35:41.874 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:41.914 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 368 ms.
17-03-18 03:35:41.914 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms.
17-03-18 03:35:41.914 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:41.914 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:35:41.914 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:35:41.914 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:41.914 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:41.924 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:41.924 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:35:41.924 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:35:42.074 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:42.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:42.074 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:42.074 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:42.074 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:35:42.074 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:42.074 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:42.084 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:42.084 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:42.084 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:35:42.264 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1330
17-03-18 03:35:42.264 -07 000000461 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:42.264 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28611 150' command took 2 ms to send, 1328 ms to get response, and 1337 ms overall
17-03-18 03:35:42.274 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:35:42.274 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 13 at Y-position 69.02783203125, Z-Position -0.130165245012313. ------
17-03-18 03:35:42.274 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:35:42.274 -07 000000424 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13661 mm
17-03-18 03:35:42.274 -07 000000424 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:42.274 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:35:42.274 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 29842, sync = True, waitForSettling = False)
17-03-18 03:35:42.274 -07 000000579 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:35:42.274 -07 000000502 INF: Z Motor: Moving to -0.136608 mm, started at -0.130165 mm, distance = -6.44 um
17-03-18 03:35:42.274 -07 000000611 INF: Y Motor: Moving to 69.8726 mm, started at 69.0278 mm, delta = 0.8448 mm
17-03-18 03:35:42.284 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:35:42.284 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:42.284 -07 000000592 INF: FPGA: Recv YRDPOS 141369
17-03-18 03:35:42.294 -07 000000502 INF: FPGA: Xmit ZDACW 29842\n [Z Motor]
17-03-18 03:35:42.294 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:35:42.294 -07 000000611 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:42.294 -07 000000611 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:42.294 -07 000000611 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:35:42.294 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:35:42.304 -07 000000444 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:35:42.304 -07 000000502 INF: FPGA: 'ZDACW 29842' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-18 03:35:42.314 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:42.324 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:42.324 -07 000000579 INF: FPGA: Recv ZDACR 29842
17-03-18 03:35:42.334 -07 000000502 INF: FPGA: 'ZDACR' command took 2 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:35:42.334 -07 000000502 INF: Z Motor: MoveAbsStepped took 53 ms (did NOT wait for settling yet))
17-03-18 03:35:42.464 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:35:42.464 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:35:42.464 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:42.464 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:35:42.464 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:35:42.464 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:42.464 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:42.464 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:35:42.464 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:42.474 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:35:42.504 -07 000000512 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:35:42.504 -07 000000444 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:35:42.684 -07 000000438 INF: FPGA: Recv YMVTILE
17-03-18 03:35:42.684 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:35:42.734 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:42.734 -07 000000512 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:35:42.744 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:42.744 -07 000000611 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:42.744 -07 000000611 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:35:42.744 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.128 mm/sec
17-03-18 03:35:43.694 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:43.694 -07 000000569 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:35:43.704 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:43.704 -07 000000611 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:43.724 -07 000000611 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:43.724 -07 000000611 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:43.724 -07 000000611 INF: Y Motor: Moved to 69.8633 after 1452 ms (table move)
17-03-18 03:35:43.734 -07 000000424 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136608 mm (DAC = 29842)
17-03-18 03:35:43.734 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:43.734 -07 000000461 INF: FPGA: Recv ZSGSRD 30559
17-03-18 03:35:43.744 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:35:43.744 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:43.744 -07 000000569 INF: FPGA: Recv ZSGSRD 30558
17-03-18 03:35:43.754 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:43.754 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:43.754 -07 000000569 INF: FPGA: Recv ZSGSRD 30559
17-03-18 03:35:43.764 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:43.764 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:43.764 -07 000000569 INF: FPGA: Recv ZSGSRD 30556
17-03-18 03:35:43.774 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:43.774 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:43.774 -07 000000461 INF: FPGA: Recv ZSGSRD 30556
17-03-18 03:35:43.784 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:43.784 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:43.784 -07 000000461 INF: FPGA: Recv ZSGSRD 30551
17-03-18 03:35:43.794 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:43.794 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:43.794 -07 000000611 INF: FPGA: Recv ZSGSRD 30558
17-03-18 03:35:43.804 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:43.804 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:43.804 -07 000000611 INF: FPGA: Recv ZSGSRD 30553
17-03-18 03:35:43.814 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:43.814 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:43.814 -07 000000611 INF: FPGA: Recv ZSGSRD 30558
17-03-18 03:35:43.824 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:43.824 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:43.824 -07 000000611 INF: FPGA: Recv ZSGSRD 30554
17-03-18 03:35:43.834 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:43.834 -07 000000424 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:43.834 -07 000000611 INF: FPGA: Recv ZPIEZORD 26342
17-03-18 03:35:43.844 -07 000000424 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:43.844 -07 000000424 INF: Z Motor: Piezo is near 36.3 V (nominally 0 to 100 V), expect near 45.5 V, since DAC is at 4.554 V. Piezo Error = -9.3 V.
17-03-18 03:35:43.844 -07 000000424 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.6 um, Read 10 ADC samples: Avg = 30556 (-135.8 uncal um), Error = 0.8 uncal um, Median = 30557 (-135.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 30551 (-135.8 uncal um), Max = 30559 (-135.8 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:35:43.844 -07 000000424 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30556, posNoise = 3, negNoise = 5
17-03-18 03:35:43.844 -07 000000424 INF: Z Motor: After move to -0.136608, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:43.844 -07 000000424 INF: Z Motor: Settle wait time = 1455 ms, measure time = 108 ms (allowed 150 ms), total time = 1563 ms
17-03-18 03:35:43.844 -07 000000424 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:43.894 -07 000000424 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1615 ms
17-03-18 03:35:43.894 -07 000000424 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:43.894 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:43.894 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:43.894 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:43.894 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:43.894 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:35:43.894 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:43.894 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:43.894 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:35:43.904 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:35:43.904 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:35:43.914 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:35:43.914 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 03:35:43.914 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:35:43.964 -07 000000438 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:35:44.264 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:35:44.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:35:44.264 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:35:44.264 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) start.
17-03-18 03:35:44.304 -07 000000461 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:35:44.304 -07 000000512 INF: FPGA: Recv CAMSNAP
17-03-18 03:35:44.304 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 383 ms to get response, and 385 ms overall
17-03-18 03:35:44.394 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:35:44.394 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:44.394 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:35:44.394 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:35:44.404 -07 000000611 INF: Autofocus start
17-03-18 03:35:44.404 -07 000000611 INF: MeasureProfile start
17-03-18 03:35:44.404 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:35:44.404 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:35:44.414 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:35:44.414 -07 000000569 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:35:44.414 -07 000000611 INF: MeasureProfile done
17-03-18 03:35:44.414 -07 000000611 INF: X=-64  Z correction [um]=-0.3149434
17-03-18 03:35:44.414 -07 000000611 INF: Autofocus finished
17-03-18 03:35:44.614 -07 000000579 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:35:44.614 -07 000000569 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:35:44.614 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.136621578214783. ----------
17-03-18 03:35:44.614 -07 000000610 INF: Cycle	114	Tile	13	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:44.624 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28286, sync = True, waitForSettling = True)
17-03-18 03:35:44.624 -07 000000610 INF: Z Motor: Moving to -0.129485 mm, started at -0.136622 mm, distance = 7.14 um
17-03-18 03:35:44.624 -07 000000610 INF: FPGA: Xmit ZDACW 28286\n [Z Motor]
17-03-18 03:35:44.624 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:35:44.634 -07 000000610 INF: FPGA: 'ZDACW 28286' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.634 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:44.634 -07 000000424 INF: FPGA: Recv ZDACR 28286
17-03-18 03:35:44.644 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.644 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:44.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:44.794 -07 000000424 INF: FPGA: Recv ZSGSRD 29441
17-03-18 03:35:44.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:44.804 -07 000000424 INF: FPGA: Recv ZSGSRD 29446
17-03-18 03:35:44.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:44.814 -07 000000424 INF: FPGA: Recv ZSGSRD 29442
17-03-18 03:35:44.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:44.824 -07 000000424 INF: FPGA: Recv ZSGSRD 29446
17-03-18 03:35:44.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:44.834 -07 000000611 INF: FPGA: Recv ZSGSRD 29450
17-03-18 03:35:44.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:44.844 -07 000000611 INF: FPGA: Recv ZSGSRD 29442
17-03-18 03:35:44.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:44.854 -07 000000611 INF: FPGA: Recv ZSGSRD 29448
17-03-18 03:35:44.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:44.864 -07 000000611 INF: FPGA: Recv ZSGSRD 29448
17-03-18 03:35:44.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:44.874 -07 000000611 INF: FPGA: Recv ZSGSRD 29442
17-03-18 03:35:44.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:44.884 -07 000000611 INF: FPGA: Recv ZSGSRD 29444
17-03-18 03:35:44.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.894 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:44.894 -07 000000569 INF: FPGA: Recv ZPIEZORD 24904
17-03-18 03:35:44.904 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:44.904 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.316 V. Piezo Error = -10.0 V.
17-03-18 03:35:44.904 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.5 um, Read 10 ADC samples: Avg = 29445 (-128.7 uncal um), Error = 0.8 uncal um, Median = 29445 (-128.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29441 (-128.7 uncal um), Max = 29450 (-128.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:35:44.904 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29445, posNoise = 5, negNoise = 4
17-03-18 03:35:44.904 -07 000000610 INF: Z Motor: After move to -0.129485, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:44.904 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:35:44.904 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:44.904 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:44.904 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:44.904 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:44.904 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:44.904 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:44.904 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:44.904 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:44.904 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:44.904 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:44.904 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:44.904 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:44.904 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:35:44.904 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:44.914 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:44.914 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:44.914 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:35:44.914 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:35:44.914 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:35:44.914 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:35:44.924 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28463 150\n [Camera]
17-03-18 03:35:45.124 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:45.534 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:45.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:45.534 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:45.534 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:45.534 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 1094749800, 0x0, 391868352) start.
17-03-18 03:35:45.534 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:45.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:45.534 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:45.534 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:45.534 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:35:45.724 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28463 792
17-03-18 03:35:45.874 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:45.914 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:35:45.914 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:35:45.914 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:45.914 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:45.914 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 1094749800, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:35:45.914 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:35:45.914 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:45.924 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:45.924 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:35:45.924 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:35:46.074 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:46.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:46.074 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:46.184 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:46.184 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:46.184 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:46.184 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:46.184 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) start.
17-03-18 03:35:46.194 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:46.194 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:35:46.264 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:35:46.264 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:46.264 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28463 150' command took 2 ms to send, 1332 ms to get response, and 1337 ms overall
17-03-18 03:35:46.264 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.129420
17-03-18 03:35:46.264 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.12942 mm
17-03-18 03:35:46.264 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:46.264 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:35:46.264 -07 000000424 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-18 03:35:46.264 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:46.264 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 28272, sync = True, waitForSettling = False)
17-03-18 03:35:46.264 -07 000000438 INF: Z Motor: Moving to -0.129421 mm, started at -0.129484 mm, distance = 0.06 um
17-03-18 03:35:46.264 -07 000000512 INF: FPGA: Recv YRDPOS 143081
17-03-18 03:35:46.274 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:35:46.274 -07 000000424 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:46.274 -07 000000438 INF: FPGA: Xmit ZDACW 28272\n [Z Motor]
17-03-18 03:35:46.274 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:35:46.274 -07 000000424 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:46.274 -07 000000424 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:35:46.284 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:46.284 -07 000000438 INF: FPGA: 'ZDACW 28272' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:35:46.294 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:46.294 -07 000000444 INF: FPGA: Recv ZDACR 28272
17-03-18 03:35:46.304 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:35:46.304 -07 000000438 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:35:46.564 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:35:46.564 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:35:46.564 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:46.574 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:35:46.574 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:35:46.574 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:46.574 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:46.574 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:46.574 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 504 ms.
17-03-18 03:35:46.584 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:35:46.594 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:46.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:46.654 -07 000000592 INF: FPGA: Recv YMVTILE
17-03-18 03:35:46.654 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-18 03:35:46.704 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:46.714 -07 000000461 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:35:46.714 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:35:46.714 -07 000000424 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:46.714 -07 000000424 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:35:46.714 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.839 mm, average velocity = 2.186 mm/sec
17-03-18 03:35:47.124 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 3.990831,
17-03-18 03:35:47.664 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:47.664 -07 000000461 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:35:47.674 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:47.674 -07 000000424 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:47.704 -07 000000424 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:47.704 -07 000000424 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:47.704 -07 000000424 INF: Y Motor: Moved to 70.6885 after 1433 ms (table move)
17-03-18 03:35:47.704 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129421 mm (DAC = 28272)
17-03-18 03:35:47.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:47.704 -07 000000424 INF: FPGA: Recv ZSGSRD 29439
17-03-18 03:35:47.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:35:47.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:47.714 -07 000000424 INF: FPGA: Recv ZSGSRD 29438
17-03-18 03:35:47.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:47.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:47.724 -07 000000502 INF: FPGA: Recv ZSGSRD 29439
17-03-18 03:35:47.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:47.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:47.734 -07 000000590 INF: FPGA: Recv ZSGSRD 29440
17-03-18 03:35:47.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:47.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:47.744 -07 000000590 INF: FPGA: Recv ZSGSRD 29435
17-03-18 03:35:47.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:47.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:47.754 -07 000000590 INF: FPGA: Recv ZSGSRD 29435
17-03-18 03:35:47.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:47.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:47.764 -07 000000590 INF: FPGA: Recv ZSGSRD 29435
17-03-18 03:35:47.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:47.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:47.774 -07 000000424 INF: FPGA: Recv ZSGSRD 29433
17-03-18 03:35:47.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:47.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:47.784 -07 000000424 INF: FPGA: Recv ZSGSRD 29434
17-03-18 03:35:47.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:47.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:47.794 -07 000000424 INF: FPGA: Recv ZSGSRD 29435
17-03-18 03:35:47.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:47.804 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:47.804 -07 000000611 INF: FPGA: Recv ZPIEZORD 24947
17-03-18 03:35:47.814 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:47.814 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.314 V. Piezo Error = -9.8 V.
17-03-18 03:35:47.814 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.4 um, Read 10 ADC samples: Avg = 29436 (-128.6 uncal um), Error = 0.8 uncal um, Median = 29435 (-128.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29433 (-128.6 uncal um), Max = 29440 (-128.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:35:47.814 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29436, posNoise = 4, negNoise = 3
17-03-18 03:35:47.814 -07 000000610 INF: Z Motor: After move to -0.129421, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:47.814 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 108 ms (allowed 150 ms), total time = 1543 ms
17-03-18 03:35:47.814 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:47.864 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1595 ms
17-03-18 03:35:47.864 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:47.864 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.129426460616011. ----------
17-03-18 03:35:47.864 -07 000000610 INF: Cycle	114	Tile	14	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:47.864 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28095, sync = True, waitForSettling = True)
17-03-18 03:35:47.864 -07 000000610 INF: Z Motor: Moving to -0.128611 mm, started at -0.129426 mm, distance = 0.82 um
17-03-18 03:35:47.864 -07 000000610 INF: FPGA: Xmit ZDACW 28095\n [Z Motor]
17-03-18 03:35:47.864 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 03:35:47.874 -07 000000610 INF: FPGA: 'ZDACW 28095' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:47.874 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:47.874 -07 000000592 INF: FPGA: Recv ZDACR 28095
17-03-18 03:35:47.884 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:47.884 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:48.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:48.034 -07 000000438 INF: FPGA: Recv ZSGSRD 29309
17-03-18 03:35:48.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:48.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:48.044 -07 000000438 INF: FPGA: Recv ZSGSRD 29312
17-03-18 03:35:48.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:48.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:48.054 -07 000000438 INF: FPGA: Recv ZSGSRD 29309
17-03-18 03:35:48.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:48.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:48.064 -07 000000579 INF: FPGA: Recv ZSGSRD 29316
17-03-18 03:35:48.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:48.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:48.074 -07 000000579 INF: FPGA: Recv ZSGSRD 29309
17-03-18 03:35:48.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:48.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:48.084 -07 000000438 INF: FPGA: Recv ZSGSRD 29323
17-03-18 03:35:48.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:48.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:48.094 -07 000000424 INF: FPGA: Recv ZSGSRD 29306
17-03-18 03:35:48.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:48.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:48.104 -07 000000424 INF: FPGA: Recv ZSGSRD 29305
17-03-18 03:35:48.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:48.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:48.114 -07 000000424 INF: FPGA: Recv ZSGSRD 29313
17-03-18 03:35:48.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:48.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:48.124 -07 000000424 INF: FPGA: Recv ZSGSRD 29315
17-03-18 03:35:48.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:48.134 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:48.134 -07 000000512 INF: FPGA: Recv ZPIEZORD 24808
17-03-18 03:35:48.144 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:48.144 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.287 V. Piezo Error = -9.9 V.
17-03-18 03:35:48.144 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29312 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29310 (-127.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29305 (-127.8 uncal um), Max = 29323 (-127.9 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:35:48.144 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29312, posNoise = 11, negNoise = 7
17-03-18 03:35:48.144 -07 000000610 INF: Z Motor: After move to -0.128611, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:48.144 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:35:48.144 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:48.144 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:48.144 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:48.144 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:48.144 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:48.144 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:48.144 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:48.144 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:48.144 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:35:48.144 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:48.144 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:35:48.144 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:48.154 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:48.154 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:48.154 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 5 ms.
17-03-18 03:35:48.154 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:48.164 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:35:48.164 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:35:48.164 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 03:35:48.164 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 03:35:48.164 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28272 150\n [Camera]
17-03-18 03:35:48.364 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:48.774 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:48.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:48.774 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:48.774 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:48.774 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:48.774 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:48.774 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:48.774 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:35:48.784 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:48.784 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1094749800, 0x0, 418435064) start.
17-03-18 03:35:48.964 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28272 792
17-03-18 03:35:49.114 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:49.154 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:35:49.154 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:35:49.154 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:49.154 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:49.154 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:35:49.154 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1094749800, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:35:49.154 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:35:49.154 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:49.154 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:49.164 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:35:49.314 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:49.314 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:49.314 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:49.314 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:49.314 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:49.314 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:49.314 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:49.314 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:35:49.434 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:49.434 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 03:35:49.504 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:35:49.504 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:49.504 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28272 150' command took 2 ms to send, 1332 ms to get response, and 1338 ms overall
17-03-18 03:35:49.504 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.129268
17-03-18 03:35:49.504 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.12927 mm
17-03-18 03:35:49.504 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:49.504 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:35:49.504 -07 000000502 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 03:35:49.504 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:49.504 -07 000000592 INF: Z Motor: Entering MoveAbsStepped (DAC = 28239, sync = True, waitForSettling = False)
17-03-18 03:35:49.504 -07 000000592 INF: Z Motor: Moving to -0.129270 mm, started at -0.128630 mm, distance = -0.64 um
17-03-18 03:35:49.514 -07 000000592 INF: FPGA: Xmit ZDACW 28239\n [Z Motor]
17-03-18 03:35:49.514 -07 000000512 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:35:49.514 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:35:49.514 -07 000000502 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:49.514 -07 000000502 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:49.514 -07 000000502 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:35:49.514 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:35:49.524 -07 000000592 INF: FPGA: 'ZDACW 28239' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:35:49.524 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:49.534 -07 000000592 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:49.534 -07 000000569 INF: FPGA: Recv ZDACR 28239
17-03-18 03:35:49.544 -07 000000592 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:35:49.544 -07 000000592 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:35:49.814 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:35:49.814 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:35:49.814 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:49.814 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 499 ms.
17-03-18 03:35:49.814 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 500 ms.
17-03-18 03:35:49.814 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:49.814 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:49.814 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 504 ms.
17-03-18 03:35:49.814 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:49.824 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 511 ms.
17-03-18 03:35:49.894 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 03:35:49.894 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:35:49.954 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:49.954 -07 000000569 INF: FPGA: Recv YRDPOS 146470
17-03-18 03:35:49.964 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:49.964 -07 000000502 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:49.964 -07 000000502 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:35:49.964 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.844 mm, average velocity = 2.181 mm/sec
17-03-18 03:35:50.914 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:50.914 -07 000000424 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:35:50.924 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:50.924 -07 000000502 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:50.944 -07 000000502 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:50.944 -07 000000502 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:35:50.944 -07 000000502 INF: Y Motor: Moved to 71.5190 after 1442 ms (table move)
17-03-18 03:35:50.954 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129270 mm (DAC = 28239)
17-03-18 03:35:50.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:50.954 -07 000000611 INF: FPGA: Recv ZSGSRD 29415
17-03-18 03:35:50.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:35:50.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:50.964 -07 000000569 INF: FPGA: Recv ZSGSRD 29415
17-03-18 03:35:50.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:50.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:50.974 -07 000000592 INF: FPGA: Recv ZSGSRD 29410
17-03-18 03:35:50.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:50.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:50.984 -07 000000579 INF: FPGA: Recv ZSGSRD 29416
17-03-18 03:35:50.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:50.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:50.994 -07 000000592 INF: FPGA: Recv ZSGSRD 29418
17-03-18 03:35:51.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.004 -07 000000444 INF: FPGA: Recv ZSGSRD 29417
17-03-18 03:35:51.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.014 -07 000000444 INF: FPGA: Recv ZSGSRD 29411
17-03-18 03:35:51.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.024 -07 000000444 INF: FPGA: Recv ZSGSRD 29409
17-03-18 03:35:51.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.034 -07 000000444 INF: FPGA: Recv ZSGSRD 29416
17-03-18 03:35:51.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.044 -07 000000444 INF: FPGA: Recv ZSGSRD 29414
17-03-18 03:35:51.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.054 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:51.054 -07 000000444 INF: FPGA: Recv ZPIEZORD 24900
17-03-18 03:35:51.064 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.064 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.309 V. Piezo Error = -9.9 V.
17-03-18 03:35:51.064 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.3 um, Read 10 ADC samples: Avg = 29414 (-128.5 uncal um), Error = 0.8 uncal um, Median = 29415 (-128.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29409 (-128.5 uncal um), Max = 29418 (-128.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:35:51.064 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29414, posNoise = 4, negNoise = 5
17-03-18 03:35:51.064 -07 000000610 INF: Z Motor: After move to -0.129270, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:51.064 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 108 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:35:51.064 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:51.114 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 03:35:51.114 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:51.114 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.129285127948892. ----------
17-03-18 03:35:51.114 -07 000000610 INF: Cycle	114	Tile	15	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:51.114 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28062, sync = True, waitForSettling = True)
17-03-18 03:35:51.114 -07 000000610 INF: Z Motor: Moving to -0.128460 mm, started at -0.129285 mm, distance = 0.83 um
17-03-18 03:35:51.114 -07 000000610 INF: FPGA: Xmit ZDACW 28062\n [Z Motor]
17-03-18 03:35:51.114 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:35:51.124 -07 000000610 INF: FPGA: 'ZDACW 28062' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:35:51.124 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:51.124 -07 000000611 INF: FPGA: Recv ZDACR 28062
17-03-18 03:35:51.134 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.134 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:51.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.284 -07 000000592 INF: FPGA: Recv ZSGSRD 29289
17-03-18 03:35:51.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:51.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.294 -07 000000592 INF: FPGA: Recv ZSGSRD 29293
17-03-18 03:35:51.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.304 -07 000000611 INF: FPGA: Recv ZSGSRD 29285
17-03-18 03:35:51.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.314 -07 000000444 INF: FPGA: Recv ZSGSRD 29289
17-03-18 03:35:51.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.324 -07 000000590 INF: FPGA: Recv ZSGSRD 29285
17-03-18 03:35:51.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.334 -07 000000590 INF: FPGA: Recv ZSGSRD 29283
17-03-18 03:35:51.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.344 -07 000000590 INF: FPGA: Recv ZSGSRD 29287
17-03-18 03:35:51.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.354 -07 000000461 INF: FPGA: Recv ZSGSRD 29283
17-03-18 03:35:51.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.364 -07 000000579 INF: FPGA: Recv ZSGSRD 29291
17-03-18 03:35:51.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:51.374 -07 000000579 INF: FPGA: Recv ZSGSRD 29285
17-03-18 03:35:51.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.384 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:51.384 -07 000000579 INF: FPGA: Recv ZPIEZORD 24725
17-03-18 03:35:51.394 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:51.394 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.282 V. Piezo Error = -10.0 V.
17-03-18 03:35:51.394 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.5 um, Read 10 ADC samples: Avg = 29287 (-127.7 uncal um), Error = 0.8 uncal um, Median = 29286 (-127.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29283 (-127.7 uncal um), Max = 29293 (-127.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:35:51.394 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29287, posNoise = 6, negNoise = 4
17-03-18 03:35:51.394 -07 000000610 INF: Z Motor: After move to -0.128460, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:51.394 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:35:51.394 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:51.394 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:51.394 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:51.394 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:51.394 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:51.394 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:51.394 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:51.394 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:51.394 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:51.394 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:51.394 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:51.394 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:51.404 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:35:51.404 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:51.404 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:51.404 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:51.414 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:35:51.414 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:35:51.414 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:35:51.414 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:35:51.424 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28239 150\n [Camera]
17-03-18 03:35:51.594 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:51.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:51.614 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:52.024 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:52.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:52.024 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:52.034 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:52.034 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:52.034 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:52.034 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:52.034 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 03:35:52.034 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:52.034 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:35:52.214 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28239 792
17-03-18 03:35:52.364 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:52.404 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 03:35:52.404 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-18 03:35:52.404 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:52.404 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 374 ms.
17-03-18 03:35:52.404 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-18 03:35:52.404 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:52.414 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:52.414 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:52.414 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:35:52.414 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:35:52.504 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.027603,
17-03-18 03:35:52.564 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:52.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:52.564 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:52.564 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:52.564 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:52.574 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:52.574 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:52.574 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:35:52.574 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:52.574 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1094749800, 0x0, 418435064) start.
17-03-18 03:35:52.754 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1330
17-03-18 03:35:52.754 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:52.754 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28239 150' command took 2 ms to send, 1327 ms to get response, and 1337 ms overall
17-03-18 03:35:52.764 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.128801
17-03-18 03:35:52.764 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.12880 mm
17-03-18 03:35:52.764 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:52.764 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:35:52.764 -07 000000502 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-18 03:35:52.764 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:52.764 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 28137, sync = True, waitForSettling = False)
17-03-18 03:35:52.764 -07 000000438 INF: Z Motor: Moving to -0.128803 mm, started at -0.128469 mm, distance = -0.33 um
17-03-18 03:35:52.764 -07 000000579 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:35:52.774 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:52.774 -07 000000502 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:52.774 -07 000000502 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:52.774 -07 000000502 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:35:52.774 -07 000000438 INF: FPGA: Xmit ZDACW 28137\n [Z Motor]
17-03-18 03:35:52.774 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:35:52.784 -07 000000438 INF: FPGA: 'ZDACW 28137' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:35:52.784 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:52.784 -07 000000592 INF: FPGA: Recv ZDACR 28137
17-03-18 03:35:52.794 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:52.794 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:52.794 -07 000000438 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 03:35:52.954 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:35:52.954 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:35:52.954 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:52.954 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1094749800, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:35:52.954 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:35:52.954 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:52.954 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:52.954 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:35:52.954 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:35:52.964 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:35:53.164 -07 000000438 INF: FPGA: Recv YMVTILE
17-03-18 03:35:53.164 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:35:53.214 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:53.224 -07 000000461 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:35:53.224 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:35:53.224 -07 000000502 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:53.224 -07 000000502 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 03:35:53.224 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.844 mm, average velocity = 2.120 mm/sec
17-03-18 03:35:54.174 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:54.174 -07 000000438 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:35:54.184 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:54.184 -07 000000502 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:54.214 -07 000000502 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:54.214 -07 000000502 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:54.214 -07 000000502 INF: Y Motor: Moved to 72.3496 after 1446 ms (table move)
17-03-18 03:35:54.214 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128803 mm (DAC = 28137)
17-03-18 03:35:54.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.214 -07 000000502 INF: FPGA: Recv ZSGSRD 29340
17-03-18 03:35:54.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:35:54.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.224 -07 000000502 INF: FPGA: Recv ZSGSRD 29336
17-03-18 03:35:54.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.234 -07 000000502 INF: FPGA: Recv ZSGSRD 29341
17-03-18 03:35:54.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.244 -07 000000502 INF: FPGA: Recv ZSGSRD 29342
17-03-18 03:35:54.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.254 -07 000000461 INF: FPGA: Recv ZSGSRD 29339
17-03-18 03:35:54.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.264 -07 000000461 INF: FPGA: Recv ZSGSRD 29345
17-03-18 03:35:54.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.274 -07 000000590 INF: FPGA: Recv ZSGSRD 29344
17-03-18 03:35:54.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:35:54.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.284 -07 000000590 INF: FPGA: Recv ZSGSRD 29339
17-03-18 03:35:54.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.294 -07 000000569 INF: FPGA: Recv ZSGSRD 29339
17-03-18 03:35:54.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.304 -07 000000444 INF: FPGA: Recv ZSGSRD 29341
17-03-18 03:35:54.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.314 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:54.314 -07 000000569 INF: FPGA: Recv ZPIEZORD 24813
17-03-18 03:35:54.324 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.324 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.293 V. Piezo Error = -9.9 V.
17-03-18 03:35:54.324 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29341 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29340 (-128.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29336 (-128.0 uncal um), Max = 29345 (-128.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:35:54.324 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29341, posNoise = 4, negNoise = 5
17-03-18 03:35:54.324 -07 000000610 INF: Z Motor: After move to -0.128803, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:54.324 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 109 ms (allowed 150 ms), total time = 1557 ms
17-03-18 03:35:54.324 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:54.374 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms
17-03-18 03:35:54.374 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:54.374 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.128816160462543. ----------
17-03-18 03:35:54.374 -07 000000610 INF: Cycle	114	Tile	16	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:54.374 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27960, sync = True, waitForSettling = True)
17-03-18 03:35:54.374 -07 000000610 INF: Z Motor: Moving to -0.127993 mm, started at -0.128816 mm, distance = 0.82 um
17-03-18 03:35:54.374 -07 000000610 INF: FPGA: Xmit ZDACW 27960\n [Z Motor]
17-03-18 03:35:54.374 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:35:54.384 -07 000000610 INF: FPGA: 'ZDACW 27960' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:54.384 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:54.384 -07 000000590 INF: FPGA: Recv ZDACR 27960
17-03-18 03:35:54.394 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.394 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:54.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.544 -07 000000424 INF: FPGA: Recv ZSGSRD 29212
17-03-18 03:35:54.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:35:54.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.554 -07 000000424 INF: FPGA: Recv ZSGSRD 29218
17-03-18 03:35:54.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.564 -07 000000424 INF: FPGA: Recv ZSGSRD 29219
17-03-18 03:35:54.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.574 -07 000000579 INF: FPGA: Recv ZSGSRD 29218
17-03-18 03:35:54.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.584 -07 000000579 INF: FPGA: Recv ZSGSRD 29211
17-03-18 03:35:54.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.594 -07 000000461 INF: FPGA: Recv ZSGSRD 29214
17-03-18 03:35:54.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.604 -07 000000461 INF: FPGA: Recv ZSGSRD 29213
17-03-18 03:35:54.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.614 -07 000000461 INF: FPGA: Recv ZSGSRD 29211
17-03-18 03:35:54.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.624 -07 000000611 INF: FPGA: Recv ZSGSRD 29210
17-03-18 03:35:54.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:54.634 -07 000000611 INF: FPGA: Recv ZSGSRD 29216
17-03-18 03:35:54.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:54.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:54.644 -07 000000569 INF: FPGA: Recv ZPIEZORD 24649
17-03-18 03:35:54.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:35:54.654 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.266 V. Piezo Error = -10.0 V.
17-03-18 03:35:54.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.0 um, Read 10 ADC samples: Avg = 29214 (-127.2 uncal um), Error = 0.8 uncal um, Median = 29214 (-127.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29210 (-127.2 uncal um), Max = 29219 (-127.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:35:54.654 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29214, posNoise = 5, negNoise = 4
17-03-18 03:35:54.654 -07 000000610 INF: Z Motor: After move to -0.127993, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:54.654 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:35:54.654 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:54.654 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:54.654 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:54.654 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:54.654 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:54.654 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:54.654 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:54.654 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:54.654 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:54.654 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:54.654 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:35:54.654 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:54.654 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:35:54.654 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:54.664 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:54.664 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:54.674 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:35:54.674 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:35:54.674 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:35:54.674 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:35:54.674 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28137 150\n [Camera]
17-03-18 03:35:54.874 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:55.284 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:55.284 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:55.284 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:55.284 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:55.284 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:35:55.284 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:55.284 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:55.284 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:55.284 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:55.284 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) start.
17-03-18 03:35:55.474 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28137 792
17-03-18 03:35:55.624 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:55.674 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:35:55.674 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:35:55.674 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:55.674 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:35:55.674 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:35:55.674 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:55.674 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:55.674 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:35:55.674 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:35:55.684 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:35:55.824 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:55.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:55.824 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:55.824 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:55.824 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:35:55.824 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:55.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:55.824 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:55.824 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:55.824 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 03:35:56.014 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:35:56.014 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:35:56.014 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28137 150' command took 5 ms to send, 1325 ms to get response, and 1337 ms overall
17-03-18 03:35:56.014 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:35:56.014 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.349609375, Z-Position -0.12800028552054. ------
17-03-18 03:35:56.024 -07 000000424 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:35:56.024 -07 000000611 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.13456 mm
17-03-18 03:35:56.024 -07 000000611 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:35:56.024 -07 000000461 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:35:56.024 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:35:56.024 -07 000000590 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 03:35:56.024 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 29394, sync = True, waitForSettling = False)
17-03-18 03:35:56.024 -07 000000502 INF: Z Motor: Moving to -0.134557 mm, started at -0.128000 mm, distance = -6.56 um
17-03-18 03:35:56.034 -07 000000424 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:35:56.034 -07 000000502 INF: FPGA: Xmit ZDACW 29394\n [Z Motor]
17-03-18 03:35:56.034 -07 000000592 INF: FPGA: Recv ZDACW
17-03-18 03:35:56.044 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:56.044 -07 000000502 INF: FPGA: 'ZDACW 29394' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:35:56.044 -07 000000444 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:35:56.054 -07 000000424 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:35:56.054 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-18 03:35:56.054 -07 000000590 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:56.054 -07 000000590 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:35:56.054 -07 000000590 INF: Y Motor: Moving 1349 steps-27
17-03-18 03:35:56.064 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:56.064 -07 000000579 INF: FPGA: Recv ZDACR 29394
17-03-18 03:35:56.074 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:35:56.074 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:35:56.074 -07 000000502 INF: Z Motor: MoveAbsStepped took 44 ms (did NOT wait for settling yet))
17-03-18 03:35:56.204 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:35:56.204 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:35:56.204 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:56.204 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:35:56.204 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:35:56.204 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:56.204 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:56.204 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:35:56.214 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:56.214 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:35:56.254 -07 000000444 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:35:56.254 -07 000000424 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:35:56.444 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:35:56.444 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:35:56.494 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:56.494 -07 000000502 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:35:56.504 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:35:56.504 -07 000000590 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:56.504 -07 000000590 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 03:35:56.504 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.123 mm/sec
17-03-18 03:35:56.594 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:35:56.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:35:57.454 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:35:57.454 -07 000000569 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:35:57.464 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:57.464 -07 000000590 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:35:57.494 -07 000000590 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:35:57.494 -07 000000590 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:35:57.494 -07 000000590 INF: Y Motor: Moved to 73.1763 after 1465 ms (table move)
17-03-18 03:35:57.494 -07 000000611 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134557 mm (DAC = 29394)
17-03-18 03:35:57.494 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:57.494 -07 000000592 INF: FPGA: Recv ZSGSRD 30233
17-03-18 03:35:57.504 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:35:57.504 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:57.504 -07 000000444 INF: FPGA: Recv ZSGSRD 30228
17-03-18 03:35:57.514 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:57.514 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:57.514 -07 000000592 INF: FPGA: Recv ZSGSRD 30231
17-03-18 03:35:57.524 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:57.524 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:57.524 -07 000000569 INF: FPGA: Recv ZSGSRD 30237
17-03-18 03:35:57.534 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:57.534 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:57.534 -07 000000592 INF: FPGA: Recv ZSGSRD 30242
17-03-18 03:35:57.544 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:57.554 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:57.554 -07 000000512 INF: FPGA: Recv ZSGSRD 30235
17-03-18 03:35:57.564 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:35:57.564 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:57.564 -07 000000444 INF: FPGA: Recv ZSGSRD 30233
17-03-18 03:35:57.574 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:57.574 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:57.574 -07 000000512 INF: FPGA: Recv ZSGSRD 30226
17-03-18 03:35:57.584 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:57.584 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:57.584 -07 000000579 INF: FPGA: Recv ZSGSRD 30234
17-03-18 03:35:57.594 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:57.594 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:57.594 -07 000000592 INF: FPGA: Recv ZSGSRD 30238
17-03-18 03:35:57.604 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:57.604 -07 000000611 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:57.604 -07 000000502 INF: FPGA: Recv ZPIEZORD 26042
17-03-18 03:35:57.614 -07 000000611 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:57.614 -07 000000611 INF: Z Motor: Piezo is near 35.6 V (nominally 0 to 100 V), expect near 44.9 V, since DAC is at 4.485 V. Piezo Error = -9.2 V.
17-03-18 03:35:57.614 -07 000000611 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.6 um, Read 10 ADC samples: Avg = 30234 (-133.8 uncal um), Error = 0.8 uncal um, Median = 30234 (-133.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 30226 (-133.7 uncal um), Max = 30242 (-133.8 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:35:57.614 -07 000000611 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30234, posNoise = 8, negNoise = 8
17-03-18 03:35:57.614 -07 000000611 INF: Z Motor: After move to -0.134557, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:57.614 -07 000000611 INF: Z Motor: Settle wait time = 1469 ms, measure time = 115 ms (allowed 150 ms), total time = 1584 ms
17-03-18 03:35:57.614 -07 000000611 INF: Z Motor: Waiting extra 35 ms after reading position to reach expected total of 150 ms
17-03-18 03:35:57.654 -07 000000611 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1627 ms
17-03-18 03:35:57.654 -07 000000611 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:35:57.654 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:57.654 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:57.654 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:35:57.654 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:57.654 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:57.654 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:57.654 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:57.654 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:35:57.664 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:35:57.664 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:35:57.674 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:35:57.674 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:35:57.674 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:35:57.724 -07 000000424 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:35:57.864 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.015368,
17-03-18 03:35:58.024 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:35:58.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:35:58.024 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:35:58.024 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) start.
17-03-18 03:35:58.054 -07 000000590 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:35:58.064 -07 000000512 INF: FPGA: Recv CAMSNAP
17-03-18 03:35:58.064 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall
17-03-18 03:35:58.134 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) end. Duration was 115 ms.
17-03-18 03:35:58.134 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:58.134 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:58.144 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-18 03:35:58.164 -07 000000512 INF: Autofocus start
17-03-18 03:35:58.164 -07 000000512 INF: MeasureProfile start
17-03-18 03:35:58.164 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:35:58.164 -07 000000592 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:35:58.174 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:35:58.174 -07 000000512 INF: MeasureProfile done
17-03-18 03:35:58.174 -07 000000512 INF: X=48  Z correction [um]=0.2069503
17-03-18 03:35:58.174 -07 000000512 INF: Autofocus finished
17-03-18 03:35:58.194 -07 000000444 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:35:58.394 -07 000000461 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:35:58.394 -07 000000444 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:35:58.394 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.134552981905136. ----------
17-03-18 03:35:58.404 -07 000000610 INF: Cycle	114	Tile	17	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:35:58.404 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27951, sync = True, waitForSettling = True)
17-03-18 03:35:58.404 -07 000000610 INF: Z Motor: Moving to -0.127951 mm, started at -0.134553 mm, distance = 6.60 um
17-03-18 03:35:58.404 -07 000000610 INF: FPGA: Xmit ZDACW 27951\n [Z Motor]
17-03-18 03:35:58.404 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:35:58.414 -07 000000610 INF: FPGA: 'ZDACW 27951' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:35:58.414 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:35:58.414 -07 000000424 INF: FPGA: Recv ZDACR 27951
17-03-18 03:35:58.424 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.424 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:35:58.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:58.574 -07 000000611 INF: FPGA: Recv ZSGSRD 29205
17-03-18 03:35:58.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:58.584 -07 000000424 INF: FPGA: Recv ZSGSRD 29215
17-03-18 03:35:58.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:58.594 -07 000000502 INF: FPGA: Recv ZSGSRD 29204
17-03-18 03:35:58.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:58.604 -07 000000502 INF: FPGA: Recv ZSGSRD 29203
17-03-18 03:35:58.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:58.614 -07 000000502 INF: FPGA: Recv ZSGSRD 29208
17-03-18 03:35:58.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:58.624 -07 000000424 INF: FPGA: Recv ZSGSRD 29209
17-03-18 03:35:58.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:58.634 -07 000000592 INF: FPGA: Recv ZSGSRD 29212
17-03-18 03:35:58.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:58.644 -07 000000424 INF: FPGA: Recv ZSGSRD 29206
17-03-18 03:35:58.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:58.654 -07 000000592 INF: FPGA: Recv ZSGSRD 29207
17-03-18 03:35:58.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:35:58.664 -07 000000502 INF: FPGA: Recv ZSGSRD 29203
17-03-18 03:35:58.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.674 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:35:58.674 -07 000000592 INF: FPGA: Recv ZPIEZORD 24685
17-03-18 03:35:58.684 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:35:58.684 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.265 V. Piezo Error = -9.9 V.
17-03-18 03:35:58.684 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.0 um, Read 10 ADC samples: Avg = 29207 (-127.2 uncal um), Error = 0.8 uncal um, Median = 29206 (-127.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29203 (-127.2 uncal um), Max = 29215 (-127.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:35:58.684 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29207, posNoise = 8, negNoise = 4
17-03-18 03:35:58.684 -07 000000610 INF: Z Motor: After move to -0.127951, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:35:58.684 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:35:58.684 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:35:58.684 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:35:58.684 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:35:58.684 -07 000000592 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:35:58.684 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:35:58.684 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:35:58.684 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:35:58.684 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:35:58.684 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:35:58.684 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:35:58.684 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:35:58.684 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:35:58.694 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:35:58.694 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:35:58.694 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:35:58.694 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:35:58.704 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:35:58.704 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:35:58.704 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:35:58.704 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:35:58.704 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28128 150\n [Camera]
17-03-18 03:35:58.904 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:35:59.314 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:35:59.314 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:35:59.314 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:35:59.314 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:35:59.314 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:59.314 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:59.314 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 03:35:59.314 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:59.314 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:59.314 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:35:59.504 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28128 792
17-03-18 03:35:59.654 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:35:59.684 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:35:59.684 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:35:59.684 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:59.694 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:59.694 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:35:59.694 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:35:59.694 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:35:59.694 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:35:59.694 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:35:59.704 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:35:59.844 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:35:59.844 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:35:59.854 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:35:59.854 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:35:59.854 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 03:35:59.854 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:35:59.854 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:35:59.854 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:35:59.854 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:35:59.854 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 03:36:00.044 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1330
17-03-18 03:36:00.044 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:36:00.044 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28128 150' command took 2 ms to send, 1331 ms to get response, and 1337 ms overall
17-03-18 03:36:00.044 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128308
17-03-18 03:36:00.044 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12831 mm
17-03-18 03:36:00.044 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:36:00.044 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:36:00.044 -07 000000461 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-18 03:36:00.044 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 28029, sync = True, waitForSettling = False)
17-03-18 03:36:00.044 -07 000000611 INF: Z Motor: Moving to -0.128309 mm, started at -0.127955 mm, distance = -0.35 um
17-03-18 03:36:00.044 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:36:00.174 -07 000000611 INF: FPGA: Xmit ZDACW 28029\n [Z Motor]
17-03-18 03:36:00.174 -07 000000424 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:36:00.174 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 125 ms overall
17-03-18 03:36:00.174 -07 000000461 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:36:00.174 -07 000000461 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:36:00.174 -07 000000461 INF: Y Motor: Moving 1354 steps-33
17-03-18 03:36:00.174 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:36:00.184 -07 000000611 INF: FPGA: 'ZDACW 28029' command took 0 ms to send, 0 ms to get response, and 134 ms overall
17-03-18 03:36:00.184 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:36:00.194 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:36:00.194 -07 000000424 INF: FPGA: Recv ZDACR 28029
17-03-18 03:36:00.204 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:36:00.204 -07 000000611 INF: Z Motor: MoveAbsStepped took 154 ms (did NOT wait for settling yet))
17-03-18 03:36:00.254 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 03:36:00.254 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:36:00.254 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:36:00.254 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 403 ms.
17-03-18 03:36:00.254 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:36:00.254 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:36:00.254 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:36:00.264 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:36:00.264 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 411 ms.
17-03-18 03:36:00.264 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 03:36:00.554 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 03:36:00.554 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 03:36:00.594 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:36:00.604 -07 000000579 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:36:00.604 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:36:00.604 -07 000000461 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:36:00.604 -07 000000461 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:36:00.604 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.846 mm, average velocity = 2.193 mm/sec
17-03-18 03:36:01.554 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:36:01.554 -07 000000502 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:36:01.564 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:36:01.564 -07 000000461 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:36:01.584 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:36:01.584 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:36:01.594 -07 000000461 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:36:01.594 -07 000000461 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:36:01.594 -07 000000461 INF: Y Motor: Moved to 74.0083 after 1547 ms (table move)
17-03-18 03:36:01.594 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128309 mm (DAC = 28029)
17-03-18 03:36:01.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.604 -07 000000590 INF: FPGA: Recv ZSGSRD 29257
17-03-18 03:36:01.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:36:01.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.604 -07 000000590 INF: FPGA: Recv ZSGSRD 29260
17-03-18 03:36:01.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.614 -07 000000590 INF: FPGA: Recv ZSGSRD 29267
17-03-18 03:36:01.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.624 -07 000000444 INF: FPGA: Recv ZSGSRD 29262
17-03-18 03:36:01.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.634 -07 000000444 INF: FPGA: Recv ZSGSRD 29267
17-03-18 03:36:01.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.644 -07 000000444 INF: FPGA: Recv ZSGSRD 29259
17-03-18 03:36:01.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.654 -07 000000502 INF: FPGA: Recv ZSGSRD 29258
17-03-18 03:36:01.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.664 -07 000000444 INF: FPGA: Recv ZSGSRD 29263
17-03-18 03:36:01.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.674 -07 000000579 INF: FPGA: Recv ZSGSRD 29260
17-03-18 03:36:01.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.684 -07 000000590 INF: FPGA: Recv ZSGSRD 29264
17-03-18 03:36:01.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.694 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:36:01.694 -07 000000590 INF: FPGA: Recv ZPIEZORD 24788
17-03-18 03:36:01.704 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.704 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.277 V. Piezo Error = -9.8 V.
17-03-18 03:36:01.704 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.3 um, Read 10 ADC samples: Avg = 29262 (-127.5 uncal um), Error = 0.8 uncal um, Median = 29261 (-127.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29257 (-127.5 uncal um), Max = 29267 (-127.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:36:01.704 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29262, posNoise = 5, negNoise = 5
17-03-18 03:36:01.704 -07 000000610 INF: Z Motor: After move to -0.128309, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:36:01.704 -07 000000610 INF: Z Motor: Settle wait time = 1550 ms, measure time = 104 ms (allowed 150 ms), total time = 1654 ms
17-03-18 03:36:01.704 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 03:36:01.754 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1706 ms
17-03-18 03:36:01.754 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:36:01.754 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.128308647703344. ----------
17-03-18 03:36:01.754 -07 000000610 INF: Cycle	114	Tile	18	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:36:01.754 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27852, sync = True, waitForSettling = True)
17-03-18 03:36:01.754 -07 000000610 INF: Z Motor: Moving to -0.127498 mm, started at -0.128309 mm, distance = 0.81 um
17-03-18 03:36:01.754 -07 000000610 INF: FPGA: Xmit ZDACW 27852\n [Z Motor]
17-03-18 03:36:01.754 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:36:01.764 -07 000000610 INF: FPGA: 'ZDACW 27852' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:36:01.764 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:36:01.764 -07 000000579 INF: FPGA: Recv ZDACR 27852
17-03-18 03:36:01.774 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.774 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:36:01.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.924 -07 000000579 INF: FPGA: Recv ZSGSRD 29139
17-03-18 03:36:01.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:36:01.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.934 -07 000000444 INF: FPGA: Recv ZSGSRD 29138
17-03-18 03:36:01.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.944 -07 000000579 INF: FPGA: Recv ZSGSRD 29137
17-03-18 03:36:01.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.954 -07 000000444 INF: FPGA: Recv ZSGSRD 29136
17-03-18 03:36:01.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.964 -07 000000579 INF: FPGA: Recv ZSGSRD 29137
17-03-18 03:36:01.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.974 -07 000000444 INF: FPGA: Recv ZSGSRD 29134
17-03-18 03:36:01.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.984 -07 000000606 INF: FPGA: Recv ZSGSRD 29140
17-03-18 03:36:01.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:01.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:01.994 -07 000000444 INF: FPGA: Recv ZSGSRD 29132
17-03-18 03:36:02.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:02.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:02.004 -07 000000606 INF: FPGA: Recv ZSGSRD 29137
17-03-18 03:36:02.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:02.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:02.014 -07 000000606 INF: FPGA: Recv ZSGSRD 29142
17-03-18 03:36:02.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:02.024 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:36:02.024 -07 000000444 INF: FPGA: Recv ZPIEZORD 24621
17-03-18 03:36:02.034 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:02.034 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.250 V. Piezo Error = -9.9 V.
17-03-18 03:36:02.034 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29137 (-126.7 uncal um), Error = 0.8 uncal um, Median = 29137 (-126.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29132 (-126.7 uncal um), Max = 29142 (-126.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:36:02.034 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29137, posNoise = 5, negNoise = 5
17-03-18 03:36:02.034 -07 000000610 INF: Z Motor: After move to -0.127498, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:36:02.034 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:36:02.034 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:36:02.034 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:36:02.034 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:36:02.034 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:36:02.034 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:36:02.034 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:36:02.034 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:36:02.034 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:36:02.034 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:36:02.034 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:36:02.034 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:36:02.034 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:36:02.044 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:36:02.044 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:36:02.044 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:36:02.044 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:36:02.054 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:36:02.054 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:36:02.054 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:36:02.054 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:36:02.054 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 28029 150\n [Camera]
17-03-18 03:36:02.254 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:36:02.664 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:36:02.664 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:36:02.664 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:36:02.664 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:36:02.664 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:36:02.664 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:36:02.664 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:36:02.664 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:36:02.664 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:36:02.664 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:36:02.854 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28029 792
17-03-18 03:36:03.004 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:36:03.064 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 390 ms.
17-03-18 03:36:03.064 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:36:03.064 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:36:03.064 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 393 ms.
17-03-18 03:36:03.064 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:36:03.064 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:36:03.064 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:36:03.064 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:36:03.064 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:36:03.074 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-18 03:36:03.204 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1141
17-03-18 03:36:03.204 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1141
17-03-18 03:36:03.204 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:36:03.204 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1141
17-03-18 03:36:03.204 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1141
17-03-18 03:36:03.204 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:36:03.214 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:36:03.214 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:36:03.224 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:36:03.224 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:36:03.234 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.012614,
17-03-18 03:36:03.394 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1334
17-03-18 03:36:03.394 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:36:03.394 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 28029 150' command took 2 ms to send, 1334 ms to get response, and 1341 ms overall
17-03-18 03:36:03.394 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.127506
17-03-18 03:36:03.394 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12751 mm
17-03-18 03:36:03.394 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:36:03.394 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 27854, sync = True, waitForSettling = False)
17-03-18 03:36:03.394 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:36:03.394 -07 000000569 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 03:36:03.394 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:36:03.404 -07 000000626 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:36:03.414 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:36:03.414 -07 000000569 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:36:03.414 -07 000000569 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:36:03.414 -07 000000569 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:36:03.414 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:36:03.594 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:36:03.594 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:36:03.594 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:36:03.594 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:36:03.594 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:36:03.594 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:36:03.604 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:36:03.604 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:36:03.604 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:36:03.604 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:36:03.784 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:36:03.784 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:36:03.814 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:36:03.824 -07 000000579 INF: FPGA: Recv YRDPOS 153255
17-03-18 03:36:03.824 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:36:03.824 -07 000000569 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:36:03.824 -07 000000569 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-18 03:36:03.824 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.234 mm/sec
17-03-18 03:36:04.774 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:36:04.774 -07 000000606 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:36:04.784 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:36:04.784 -07 000000569 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:36:04.794 -07 000000569 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:36:04.794 -07 000000569 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:36:04.794 -07 000000569 INF: Y Motor: Moved to 74.8320 after 1399 ms (table move)
17-03-18 03:36:04.804 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.127507 mm (DAC = 27854)
17-03-18 03:36:04.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:04.804 -07 000000501 INF: FPGA: Recv ZSGSRD 29270
17-03-18 03:36:04.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:36:04.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:04.814 -07 000000424 INF: FPGA: Recv ZSGSRD 29269
17-03-18 03:36:04.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:36:04.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:04.824 -07 000000590 INF: FPGA: Recv ZSGSRD 29257
17-03-18 03:36:04.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:04.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:04.834 -07 000000590 INF: FPGA: Recv ZSGSRD 29261
17-03-18 03:36:04.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:04.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:04.844 -07 000000502 INF: FPGA: Recv ZSGSRD 29264
17-03-18 03:36:04.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:04.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:04.854 -07 000000590 INF: FPGA: Recv ZSGSRD 29266
17-03-18 03:36:04.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:04.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:04.864 -07 000000590 INF: FPGA: Recv ZSGSRD 29265
17-03-18 03:36:04.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:04.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:04.874 -07 000000590 INF: FPGA: Recv ZSGSRD 29265
17-03-18 03:36:04.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:04.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:04.884 -07 000000590 INF: FPGA: Recv ZSGSRD 29263
17-03-18 03:36:04.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:04.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:04.894 -07 000000424 INF: FPGA: Recv ZSGSRD 29263
17-03-18 03:36:04.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:04.904 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:36:04.904 -07 000000590 INF: FPGA: Recv ZPIEZORD 24794
17-03-18 03:36:04.914 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:04.914 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.250 V. Piezo Error = -9.5 V.
17-03-18 03:36:04.914 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29264 (-127.5 uncal um), Error = 0.0 uncal um, Median = 29264 (-127.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29257 (-127.5 uncal um), Max = 29270 (-127.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:36:04.914 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29264, posNoise = 6, negNoise = 7
17-03-18 03:36:04.914 -07 000000610 INF: Z Motor: After move to -0.127507, error = -0.000814, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:36:04.914 -07 000000610 INF: Z Motor: Settle wait time = 3045 ms, measure time = 109 ms (allowed 150 ms), total time = 3154 ms
17-03-18 03:36:04.914 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:36:04.964 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1562 ms
17-03-18 03:36:04.964 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:36:04.964 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.128321496127628. ----------
17-03-18 03:36:04.964 -07 000000610 INF: Cycle	114	Tile	19	Exposure Settings		A	407	G	196	T	196	C	407
17-03-18 03:36:04.964 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27677, sync = True, waitForSettling = True)
17-03-18 03:36:04.964 -07 000000610 INF: Z Motor: Moving to -0.126697 mm, started at -0.128321 mm, distance = 1.62 um
17-03-18 03:36:04.964 -07 000000610 INF: FPGA: Xmit ZDACW 27677\n [Z Motor]
17-03-18 03:36:04.964 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:36:04.974 -07 000000610 INF: FPGA: 'ZDACW 27677' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:36:04.974 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:36:04.974 -07 000000569 INF: FPGA: Recv ZDACR 27677
17-03-18 03:36:04.984 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:04.984 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:36:05.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:05.134 -07 000000569 INF: FPGA: Recv ZSGSRD 29018
17-03-18 03:36:05.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:36:05.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:05.144 -07 000000626 INF: FPGA: Recv ZSGSRD 29011
17-03-18 03:36:05.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:05.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:05.154 -07 000000569 INF: FPGA: Recv ZSGSRD 29009
17-03-18 03:36:05.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:05.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:05.164 -07 000000626 INF: FPGA: Recv ZSGSRD 29011
17-03-18 03:36:05.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:05.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:05.174 -07 000000626 INF: FPGA: Recv ZSGSRD 29012
17-03-18 03:36:05.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:05.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:05.184 -07 000000444 INF: FPGA: Recv ZSGSRD 29014
17-03-18 03:36:05.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:05.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:05.194 -07 000000444 INF: FPGA: Recv ZSGSRD 29010
17-03-18 03:36:05.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:05.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:05.204 -07 000000444 INF: FPGA: Recv ZSGSRD 29010
17-03-18 03:36:05.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:05.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:05.214 -07 000000569 INF: FPGA: Recv ZSGSRD 29011
17-03-18 03:36:05.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:05.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:36:05.224 -07 000000569 INF: FPGA: Recv ZSGSRD 29011
17-03-18 03:36:05.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:05.234 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:36:05.234 -07 000000626 INF: FPGA: Recv ZPIEZORD 24448
17-03-18 03:36:05.244 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:05.244 -07 000000610 INF: Z Motor: Piezo is near 32.2 V (nominally 0 to 100 V), expect near 42.2 V, since DAC is at 4.223 V. Piezo Error = -10.0 V.
17-03-18 03:36:05.244 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.7 um, Read 10 ADC samples: Avg = 29012 (-125.9 uncal um), Error = 0.8 uncal um, Median = 29011 (-125.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29009 (-125.9 uncal um), Max = 29018 (-126.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:36:05.244 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29012, posNoise = 6, negNoise = 3
17-03-18 03:36:05.244 -07 000000610 INF: Z Motor: After move to -0.126697, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:36:05.244 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:36:05.244 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:36:05.244 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:36:05.244 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:36:05.244 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:36:05.244 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:36:05.244 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:36:05.244 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:36:05.244 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:36:05.244 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:36:05.244 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:36:05.244 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:36:05.244 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:36:05.254 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:36:05.254 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:36:05.254 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:36:05.254 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:36:05.264 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:36:05.264 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:36:05.264 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:36:05.264 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:36:05.274 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 407 407 196 196 27854 150\n [Camera]
17-03-18 03:36:05.464 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:36:05.874 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 599
17-03-18 03:36:05.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 599
17-03-18 03:36:05.874 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:36:05.874 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 599
17-03-18 03:36:05.884 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 599
17-03-18 03:36:05.884 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:36:05.994 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:36:05.994 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:36:05.994 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:36:05.994 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:36:06.064 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27854 792
17-03-18 03:36:06.214 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 942
17-03-18 03:36:06.374 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:36:06.374 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:36:06.374 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:36:06.374 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:36:06.374 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:36:06.374 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:36:06.374 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:36:06.374 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 499 ms.
17-03-18 03:36:06.374 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:36:06.384 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 506 ms.
17-03-18 03:36:06.414 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1138
17-03-18 03:36:06.414 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1138
17-03-18 03:36:06.414 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:36:06.414 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1138
17-03-18 03:36:06.414 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1138
17-03-18 03:36:06.424 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:36:06.424 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:36:06.424 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:36:06.424 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:36:06.424 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:36:06.584 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:36:06.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 113. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:36:06.604 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:36:06.604 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:36:06.604 -07 000000610 INF: FPGA: 'CAMDBLSNAP 407 407 196 196 27854 150' command took 2 ms to send, 1327 ms to get response, and 1337 ms overall
17-03-18 03:36:06.794 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:36:06.794 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:36:06.794 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:36:06.804 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:36:06.804 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:36:06.804 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:36:06.804 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:36:06.804 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:36:06.804 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:36:06.804 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:36:06.814 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:36:06.844 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:36:06.844 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:36:06.884 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 03:36:06.904 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-18 03:36:06.904 -07 000000610 INF: Imaging Cycle 114: ScanTilesCommand Cycle 114 time end. Duration was 140433 ms.
17-03-18 03:36:06.904 -07 000000610 INF: =================== Cycle #114 ===================
17-03-18 03:36:06.904 -07 000000610 INF: ===================  ===================
17-03-18 03:36:06.904 -07 000000502 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:36:06.904 -07 000000424 INF: FPGA: Recv EXLED1ADCR 27
17-03-18 03:36:06.914 -07 000000502 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:36:06.914 -07 000000502 INF: GreenLED: Using Green data: Photodiode ADC 27 --> 0.0 mW (old method), or 2.0 mW (new method). Difference = 2.0 mW
17-03-18 03:36:06.914 -07 000000502 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 114, FrontChillerTemperature: 4.012614, FrontChillerHeatSinkTemperature: 0.297614, AmbientTemperature: 18.68576, FlowCellCompartmentTemperature: 21.99692, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.5824, GreenLEDSensorTemperature: 24.87799, PhotodiodePowerAdcGreen: 27, PhotodiodePowerMwGreen: 2.018235
17-03-18 03:36:07.024 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.