17-03-18 03:36:07.104 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:36:07.104 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-18 03:36:07.104 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8320 mm, delta = 0.5485 mm
17-03-18 03:36:07.104 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:36:07.114 -07 000000444 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:36:07.114 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:36:07.114 -07 000000610 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:36:07.114 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-18 03:36:07.114 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-18 03:36:07.114 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-18 03:36:07.224 -07 000000501 INF: FPGA: Recv YMVTO 154379 878
17-03-18 03:36:07.224 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 109 ms to get response, and 118 ms overall
17-03-18 03:36:07.224 -07 000000610 INF: Y Motor: Position error before settling = 0 encoder counts (0.000 mm)
17-03-18 03:36:07.224 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.549 mm) should take 877 steps, but required 878 steps (0.549 mm). Slippage = 0.001 mm (0.00%).
17-03-18 03:36:07.224 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 118 ms, distance = 0.549 mm, average velocity = 4.649 mm/sec
17-03-18 03:36:08.604 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.003063,
17-03-18 03:36:10.224 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:36:10.224 -07 000000606 INF: FPGA: Recv YRDPOS 154387
17-03-18 03:36:10.234 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:36:10.234 -07 000000610 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:36:10.264 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.003697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:36:10.264 -07 000000610 INF: Y Motor: Position error after settling = 8 encoder counts (0.004 mm), Delta during settling = 8 counts (0.004 mm)
17-03-18 03:36:10.264 -07 000000610 INF: Y Motor: Moved to 75.3843 after 3153 ms
17-03-18 03:36:10.264 -07 000000610 INF: =================== Cycle #115, Flow Cell Temp 60° ===================
17-03-18 03:36:10.264 -07 000000610 INF: =================== Cycle #115, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-18 03:36:10.264 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-18 03:36:10.274 -07 000000590 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:36:10.274 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:36:10.274 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:36:10.274 -07 000000590 INF: FPGA: Recv TEC2EN 
17-03-18 03:36:10.284 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:36:10.284 -07 000000610 INF: =================== Cycle #115, Flow Cell Temp 60° ===================
17-03-18 03:36:10.284 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:36:10.284 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:36:10.284 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:36:10.314 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:36:10.314 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-18 03:36:10.314 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:36:10.614 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:36:10.634 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:36:10.634 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:36:10.684 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:36:10.704 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:36:10.704 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:36:10.804 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:36:10.804 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:36:10.804 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:10.834 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:36:10.834 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:36:10.834 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:36:10.964 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:36:11.004 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:11.584 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:36:11.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1646, R2=1716, Total=3362. Warn if over 250 bubbles per interval.
17-03-18 03:36:13.974 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.960826,
17-03-18 03:36:14.134 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:14.164 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:14.584 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:14.614 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:15.034 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:15.064 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:15.064 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:36:15.064 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:36:15.194 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:15.224 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:36:15.224 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:36:15.354 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:15.384 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:36:15.384 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:36:15.384 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:36:15.514 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:36:15.544 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:15.974 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:16.004 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:16.004 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:36:16.004 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:36:16.584 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 6 R1 5
17-03-18 03:36:16.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=5, R2=6, Total=11. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:36:17.224 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:36:17.224 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-18 03:36:17.224 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:36:17.244 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:36:17.244 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-18 03:36:17.244 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-18 03:36:17.374 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:36:17.394 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-18 03:36:17.394 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-18 03:36:17.444 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:36:17.464 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:36:17.464 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:36:17.564 -07 000000610 INF: =================== Cycle #115, Pumping Reagent CMS (4) ===================
17-03-18 03:36:17.564 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:36:17.564 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:17.594 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:36:17.594 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:36:17.594 -07 000000610 INF: =================== Cycle #115, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-18 03:36:17.724 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:36:17.764 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:19.204 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:19.234 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:19.344 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.974486,
17-03-18 03:36:19.654 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:19.684 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:19.684 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:36:19.684 -07 000000610 INF: =================== Cycle #115, Pumping Reagent CMS (4) ===================
17-03-18 03:36:19.814 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:19.844 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:36:19.844 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:36:19.974 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:20.004 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:36:20.004 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:36:20.004 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:36:20.134 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:36:20.164 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:20.594 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:20.624 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:20.624 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:36:20.624 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:36:21.594 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:36:21.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:36:21.844 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:36:21.844 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:36:21.844 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:36:21.864 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:36:21.864 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-18 03:36:21.864 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-18 03:36:22.014 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:36:22.034 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-18 03:36:22.034 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-18 03:36:22.084 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:36:22.104 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:36:22.104 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:36:22.204 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:36:22.204 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:36:22.204 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:22.234 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:36:22.234 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:36:22.234 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:36:22.364 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:36:22.404 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:23.274 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:23.304 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:23.304 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:36:23.304 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:36:23.434 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:23.464 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:36:23.464 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:36:23.594 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:23.624 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:36:23.624 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:36:23.624 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:36:23.754 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:36:23.784 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:24.214 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:24.244 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:24.244 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:36:24.244 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:36:24.244 -07 000000606 INF: WaitCommand(10000) start
17-03-18 03:36:24.244 -07 000000502 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:36:24.244 -07 000000502 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:36:24.714 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.019446,
17-03-18 03:36:25.464 -07 000000502 INF: AsyncDelayTimer waited 1216ms
17-03-18 03:36:25.464 -07 000000502 INF: LanePump: Xmit /1?\r
17-03-18 03:36:25.494 -07 000000502 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:36:25.494 -07 000000502 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:36:25.624 -07 000000502 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:36:25.664 -07 000000502 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:26.594 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:36:26.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:36:27.194 -07 000000502 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:27.224 -07 000000502 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:27.644 -07 000000502 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:27.674 -07 000000502 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:27.674 -07 000000502 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:36:27.674 -07 000000502 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:36:27.674 -07 000000502 INF: ===================  ===================
17-03-18 03:36:30.084 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.988112,
17-03-18 03:36:31.594 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:36:31.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:36:34.254 -07 000000606 INF: WaitCommand(10000) end
17-03-18 03:36:34.254 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:36:34.254 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-18 03:36:34.254 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:34.284 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:36:34.284 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:36:34.284 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:36:34.414 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-18 03:36:34.454 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:35.454 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.003063,
17-03-18 03:36:36.594 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:36:36.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:36:40.584 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:40.614 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:40.824 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.005817,
17-03-18 03:36:41.034 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:41.064 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:41.484 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:41.514 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:41.594 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:36:41.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:36:41.934 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:41.964 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:42.384 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:42.414 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:42.414 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-18 03:36:42.414 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:36:42.544 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:42.574 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:36:42.574 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:36:42.704 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:42.734 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:36:42.734 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:36:42.734 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:36:42.864 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:36:42.894 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:43.324 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:43.354 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:43.354 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:36:43.354 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:36:44.574 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-18 03:36:44.574 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-18 03:36:44.574 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:36:44.594 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:36:44.594 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-18 03:36:44.594 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-18 03:36:44.804 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:36:44.824 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-18 03:36:44.824 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-18 03:36:44.874 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:36:44.894 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:36:44.894 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:36:44.994 -07 000000610 INF: =================== Cycle #115, Pumping Reagent IMT (1) ===================
17-03-18 03:36:44.994 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:36:44.994 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:45.024 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:36:45.024 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:36:45.024 -07 000000610 INF: =================== Cycle #115, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-18 03:36:45.154 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:36:45.194 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:46.194 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.020806,
17-03-18 03:36:46.594 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:36:46.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:36:46.634 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:46.664 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:47.084 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:47.114 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:47.114 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:36:47.114 -07 000000610 INF: =================== Cycle #115, Pumping Reagent IMT (1) ===================
17-03-18 03:36:47.244 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:47.274 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:36:47.274 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:36:47.404 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:47.434 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:36:47.434 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:36:47.434 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:36:47.564 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:36:47.594 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:48.024 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:48.054 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:48.054 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:36:48.054 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:36:49.274 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-18 03:36:49.274 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:36:49.274 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:36:49.294 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:36:49.294 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-18 03:36:49.294 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:36:49.524 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:36:49.544 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-18 03:36:49.544 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-18 03:36:49.594 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:36:49.614 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:36:49.614 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:36:49.714 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:36:49.714 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:36:49.714 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:49.744 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:36:49.744 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:36:49.744 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:36:49.874 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:36:49.914 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:36:50.784 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:50.814 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:50.814 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:36:50.814 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:36:50.944 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:50.974 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:36:50.974 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:36:51.104 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:36:51.134 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:36:51.134 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:36:51.134 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:36:51.264 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:36:51.294 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:51.574 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.999021,
17-03-18 03:36:51.594 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:36:51.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:36:51.724 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:36:51.754 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:36:51.754 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:36:51.754 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:36:51.754 -07 000000610 INF: =================== Cycle #115, Flow Cell Temp 65° ===================
17-03-18 03:36:51.754 -07 000000610 INF: =================== Cycle #115, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-18 03:36:51.924 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:36:51.924 -07 000000502 INF: FPGA: Recv TEC2EN 
17-03-18 03:36:51.934 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:36:51.934 -07 000000610 INF: =================== Cycle #115, Flow Cell Temp 65° ===================
17-03-18 03:36:51.934 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:36:51.934 -07 000000610 INF: WaitCommand(30000) start
17-03-18 03:36:56.594 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:36:56.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:36:56.934 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.005817,
17-03-18 03:37:01.594 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:37:01.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:37:02.304 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.997626,
17-03-18 03:37:06.594 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:37:06.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:37:07.674 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.014009,
17-03-18 03:37:11.594 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:37:11.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:37:13.044 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.037119,
17-03-18 03:37:16.594 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:37:16.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:37:18.424 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.004458,
17-03-18 03:37:21.594 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:37:21.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:37:21.944 -07 000000610 INF: WaitCommand(30000) end
17-03-18 03:37:21.944 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:37:21.944 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-18 03:37:21.944 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:37:21.974 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:37:21.974 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:37:21.974 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:37:22.104 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-18 03:37:22.144 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:37:22.684 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:37:22.714 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:37:22.714 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete
17-03-18 03:37:22.714 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:37:22.844 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:37:22.874 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:37:22.874 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:37:23.004 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:37:23.034 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:37:23.034 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:37:23.034 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:37:23.164 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:37:23.194 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:37:23.624 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:37:23.654 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:37:23.654 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:37:23.654 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:37:23.654 -07 000000501 INF: WaitCommand(30000) start
17-03-18 03:37:23.654 -07 000000461 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:37:23.654 -07 000000461 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:37:23.784 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.966297,
17-03-18 03:37:24.874 -07 000000461 INF: AsyncDelayTimer waited 1216ms
17-03-18 03:37:24.874 -07 000000461 INF: LanePump: Xmit /1?\r
17-03-18 03:37:24.904 -07 000000461 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:37:24.904 -07 000000461 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:37:25.034 -07 000000461 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:37:25.074 -07 000000461 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:37:26.594 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:37:26.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:37:27.414 -07 000000461 INF: LanePump: Xmit /1Q\r
17-03-18 03:37:27.444 -07 000000461 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:37:27.864 -07 000000461 INF: LanePump: Xmit /1Q\r
17-03-18 03:37:27.894 -07 000000461 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:37:27.894 -07 000000461 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-18 03:37:27.894 -07 000000461 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:37:27.894 -07 000000461 INF: ===================  ===================
17-03-18 03:37:29.154 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.98264,
17-03-18 03:37:31.594 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:37:31.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:37:34.524 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.011254,
17-03-18 03:37:36.594 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:37:36.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:37:39.894 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.016692,
17-03-18 03:37:41.594 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:37:41.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:37:45.264 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.014009,
17-03-18 03:37:46.594 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:37:46.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:37:50.634 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.978563,
17-03-18 03:37:51.594 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:37:51.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1651, R2=1722, Total=3373. Warn if over 250 bubbles per interval.
17-03-18 03:37:53.664 -07 000000501 INF: WaitCommand(30000) end
17-03-18 03:37:53.664 -07 000000610 INF: =================== Cycle #115, Flow Cell Temp 22° ===================
17-03-18 03:37:53.664 -07 000000610 INF: =================== Cycle #115, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-18 03:37:53.664 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-18 03:37:53.674 -07 000000591 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:37:53.674 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:37:53.674 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:37:53.674 -07 000000501 INF: FPGA: Recv TEC2EN 
17-03-18 03:37:53.684 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:37:53.684 -07 000000610 INF: =================== Cycle #115, Flow Cell Temp 22° ===================
17-03-18 03:37:53.684 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:37:53.684 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:37:53.684 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:37:53.684 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:37:53.724 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:37:53.724 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:37:53.724 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:37:53.854 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:37:53.894 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:37:56.004 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.996267,
17-03-18 03:37:56.594 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 2
17-03-18 03:37:56.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=2, R2=2, Total=4. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1653, R2=1724, Total=3377. Warn if over 250 bubbles per interval.
17-03-18 03:37:57.024 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:37:57.054 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:37:57.474 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:37:57.504 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:37:57.924 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:37:57.954 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:37:57.954 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:37:57.954 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:37:58.084 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:37:58.114 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:37:58.114 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:37:58.244 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:37:58.274 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:37:58.274 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:37:58.274 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:37:58.404 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:37:58.434 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:37:58.864 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:37:58.894 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:37:58.894 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:37:58.894 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:38:00.114 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:38:00.114 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-18 03:38:00.114 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:38:00.134 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:38:00.134 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-18 03:38:00.134 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-18 03:38:00.284 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:38:00.304 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:38:00.304 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:38:00.354 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:38:00.374 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:38:00.374 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:38:00.474 -07 000000610 INF: =================== Cycle #115, Pumping Reagent USM (2) ===================
17-03-18 03:38:00.474 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:38:00.474 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:38:00.504 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:38:00.504 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:38:00.504 -07 000000610 INF: =================== Cycle #115, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-18 03:38:00.634 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:38:00.674 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:38:01.374 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.001704,
17-03-18 03:38:01.594 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 3 R1 3
17-03-18 03:38:01.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=3, R2=3, Total=6. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:02.114 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:38:02.144 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:38:02.564 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:38:02.594 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:38:02.594 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:38:02.594 -07 000000610 INF: =================== Cycle #115, Pumping Reagent USM (2) ===================
17-03-18 03:38:02.724 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:38:02.754 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:38:02.754 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:38:02.884 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:38:02.914 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:38:02.914 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:38:02.914 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:38:03.044 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:38:03.074 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:38:03.504 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:38:03.534 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:38:03.534 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:38:03.534 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:38:04.754 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:38:04.754 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:38:04.754 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:38:04.774 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:38:04.774 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-18 03:38:04.774 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:38:04.924 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:38:04.944 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:38:04.944 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:38:04.994 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:38:05.014 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:38:05.014 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:38:05.114 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:38:05.114 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:38:05.114 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:38:05.144 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:38:05.144 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:38:05.144 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:38:05.274 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:38:05.314 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:38:06.184 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:38:06.214 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:38:06.214 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:38:06.214 -07 000000610 INF: =================== Cycle #115, Pumping Reagent PR2 (3) ===================
17-03-18 03:38:06.344 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:38:06.374 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:38:06.374 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:38:06.504 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:38:06.534 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:38:06.534 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:38:06.534 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:38:06.664 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:38:07.244 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:38:07.244 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:07.244 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.988112,
17-03-18 03:38:07.254 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:38:07.684 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:38:07.714 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:38:07.714 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:38:07.714 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:38:07.714 -07 000000502 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:38:07.714 -07 000000424 INF: WaitCommand(10000) start
17-03-18 03:38:07.714 -07 000000502 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:38:08.374 -07 000000502 INF: AsyncDelayTimer waited 654ms
17-03-18 03:38:08.374 -07 000000502 INF: LanePump: Xmit /1?\r
17-03-18 03:38:08.404 -07 000000502 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:38:08.404 -07 000000502 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:38:08.534 -07 000000502 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:38:08.574 -07 000000502 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:38:10.104 -07 000000502 INF: LanePump: Xmit /1Q\r
17-03-18 03:38:10.134 -07 000000502 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:38:10.554 -07 000000502 INF: LanePump: Xmit /1Q\r
17-03-18 03:38:10.584 -07 000000502 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:38:10.584 -07 000000502 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:38:10.584 -07 000000502 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:38:10.584 -07 000000502 INF: ===================  ===================
17-03-18 03:38:11.594 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:38:11.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:12.604 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.993549,
17-03-18 03:38:16.594 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:38:16.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:17.724 -07 000000424 INF: WaitCommand(10000) end
17-03-18 03:38:17.724 -07 000000610 INF: =================== Cycle #115, Imaging ===================
17-03-18 03:38:17.724 -07 000000610 INF: Imaging Cycle 115: ScanTilesCommand Cycle 115 time start.
17-03-18 03:38:17.724 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-18 03:38:17.724 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:38:17.754 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:38:17.754 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-18 03:38:17.754 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-18 03:38:17.974 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.985358,
17-03-18 03:38:18.654 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:38:18.674 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:38:18.674 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:38:18.724 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:38:18.744 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:38:18.744 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:18.744 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:18.744 -07 000000424 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-18 03:38:18.744 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:18.744 -07 000000424 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-18 03:38:18.754 -07 000000461 INF: FPGA: Recv EXLED1ON 
17-03-18 03:38:18.754 -07 000000424 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:38:18.754 -07 000000424 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-18 03:38:18.754 -07 000000591 INF: FPGA: Recv EXLED1ADCR 23126
17-03-18 03:38:18.764 -07 000000424 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:18.764 -07 000000424 INF: RedLED: Using Red data: Photodiode ADC 23126 --> 7.4 mW (old method), or 205.0 mW (new method). Difference = 197.6 mW
17-03-18 03:38:18.764 -07 000000424 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-18 03:38:18.764 -07 000000502 INF: FPGA: Recv EXLED1OFF 
17-03-18 03:38:18.774 -07 000000424 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:18.774 -07 000000424 INF: RedLED: LED was on for 19 ms
17-03-18 03:38:18.774 -07 000000424 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 23 ms.
17-03-18 03:38:18.774 -07 000000424 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-18 03:38:18.774 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:18.774 -07 000000424 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-18 03:38:18.774 -07 000000502 INF: FPGA: Recv EXLED2ON 
17-03-18 03:38:18.784 -07 000000424 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:38:18.784 -07 000000424 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:38:18.784 -07 000000502 INF: FPGA: Recv EXLED1ADCR 2099
17-03-18 03:38:18.794 -07 000000424 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:18.794 -07 000000424 INF: GreenLED: Using Green data: Photodiode ADC 2099 --> 0.9 mW (old method), or 182.4 mW (new method). Difference = 181.5 mW
17-03-18 03:38:18.794 -07 000000424 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-18 03:38:18.794 -07 000000606 INF: FPGA: Recv EXLED2OFF 
17-03-18 03:38:18.804 -07 000000424 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:18.804 -07 000000424 INF: GreenLED: LED was on for 19 ms
17-03-18 03:38:18.804 -07 000000424 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-18 03:38:18.804 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:38:18.804 -07 000000424 INF: FPGA: Recv EMCUR 
17-03-18 03:38:18.814 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:38:18.814 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-18 03:38:19.314 -07 000000424 INF: FPGA: Recv EMOUT
17-03-18 03:38:19.314 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 03:38:19.314 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-18 03:38:19.314 -07 000000591 INF: FPGA: Recv EMCUR 
17-03-18 03:38:19.324 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:38:19.324 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:38:19.324 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.38427734375, Z-Position -0.126702594667904. ------
17-03-18 03:38:19.324 -07 000000585 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:38:19.324 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17870 mm
17-03-18 03:38:19.324 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:38:19.324 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:38:19.324 -07 000000606 INF: Y Motor: Moving to 59.9126 mm, started at 75.3843 mm, delta = -15.4717 mm
17-03-18 03:38:19.324 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:38:19.334 -07 000000585 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:38:19.334 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 39037, sync = True, waitForSettling = False)
17-03-18 03:38:19.334 -07 000000461 INF: Z Motor: Moving to -0.178700 mm, started at -0.126703 mm, distance = -52.00 um
17-03-18 03:38:19.334 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:19.334 -07 000000591 INF: FPGA: Recv YRDPOS 154387
17-03-18 03:38:19.344 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:19.344 -07 000000606 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:19.344 -07 000000606 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-18 03:38:19.344 -07 000000606 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:38:19.344 -07 000000585 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:38:19.354 -07 000000461 INF: FPGA: Xmit ZDACW 39037\n [Z Motor]
17-03-18 03:38:19.354 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:38:19.364 -07 000000461 INF: FPGA: 'ZDACW 39037' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:38:19.364 -07 000000606 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:38:19.374 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:19.374 -07 000000591 INF: FPGA: Recv ZDACR 39037
17-03-18 03:38:19.384 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:38:19.384 -07 000000461 INF: Z Motor: MoveAbsStepped took 50 ms (did NOT wait for settling yet))
17-03-18 03:38:19.544 -07 000000461 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:38:19.544 -07 000000585 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 213 ms overall
17-03-18 03:38:21.044 -07 000000591 INF: FPGA: Recv YMVTO 122703 24782
17-03-18 03:38:21.044 -07 000000606 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1706 ms overall
17-03-18 03:38:21.044 -07 000000606 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:38:21.044 -07 000000606 INF: Y Motor: To move from 75.384 to 59.913 (-15.472 mm) should take 24755 steps, but required 24782 steps (15.489 mm). Slippage = 0.017 mm (0.00%).
17-03-18 03:38:21.044 -07 000000606 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1706 ms, distance = 15.472 mm, average velocity = 9.069 mm/sec
17-03-18 03:38:21.594 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:38:21.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:23.894 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:23.894 -07 000000569 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:38:23.904 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:23.904 -07 000000606 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:23.934 -07 000000606 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:38:23.934 -07 000000606 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm)
17-03-18 03:38:23.934 -07 000000606 INF: Y Motor: Moved to 59.9106 after 4601 ms
17-03-18 03:38:23.934 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178700 mm (DAC = 39037)
17-03-18 03:38:23.934 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:23.934 -07 000000501 INF: FPGA: Recv ZSGSRD 37112
17-03-18 03:38:23.944 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:38:23.944 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:23.944 -07 000000606 INF: FPGA: Recv ZSGSRD 37098
17-03-18 03:38:23.954 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:23.954 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:23.954 -07 000000461 INF: FPGA: Recv ZSGSRD 37103
17-03-18 03:38:23.964 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:23.964 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:23.964 -07 000000606 INF: FPGA: Recv ZSGSRD 37115
17-03-18 03:38:23.974 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:23.974 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:23.974 -07 000000461 INF: FPGA: Recv ZSGSRD 37106
17-03-18 03:38:23.984 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:23.994 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:23.994 -07 000000585 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.001704,
17-03-18 03:38:23.994 -07 000000591 INF: FPGA: Recv ZSGSRD 37110
17-03-18 03:38:24.004 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:38:24.004 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:24.004 -07 000000606 INF: FPGA: Recv ZSGSRD 37113
17-03-18 03:38:24.014 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:24.024 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:24.024 -07 000000591 INF: FPGA: Recv ZSGSRD 37101
17-03-18 03:38:24.034 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:38:24.034 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:24.034 -07 000000585 INF: FPGA: Recv ZSGSRD 37106
17-03-18 03:38:24.044 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:24.054 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:24.054 -07 000000585 INF: FPGA: Recv ZSGSRD 37105
17-03-18 03:38:24.064 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:38:24.064 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:24.064 -07 000000461 INF: FPGA: Recv ZPIEZORD 33324
17-03-18 03:38:24.074 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:24.074 -07 000000502 INF: Z Motor: Piezo is near 51.2 V (nominally 0 to 100 V), expect near 59.6 V, since DAC is at 5.957 V. Piezo Error = -8.4 V.
17-03-18 03:38:24.074 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.7 um, Read 10 ADC samples: Avg = 37107 (-177.8 uncal um), Error = 0.9 uncal um, Median = 37106 (-177.8 uncal um), StdDev = 6 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 37098 (-177.8 uncal um), Max = 37115 (-177.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:38:24.074 -07 000000502 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37107, posNoise = 8, negNoise = 9
17-03-18 03:38:24.074 -07 000000502 INF: Z Motor: After move to -0.178700, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:24.074 -07 000000502 INF: Z Motor: Settle wait time = 4603 ms, measure time = 137 ms (allowed 150 ms), total time = 4740 ms
17-03-18 03:38:24.074 -07 000000502 INF: Z Motor: Waiting extra 13 ms after reading position to reach expected total of 150 ms
17-03-18 03:38:24.094 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4763 ms
17-03-18 03:38:24.094 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:38:24.094 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:24.094 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:24.094 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:24.094 -07 000000430 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:38:24.094 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:24.094 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:24.094 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:38:24.094 -07 000000430 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:38:24.124 -07 000000430 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 03:38:24.124 -07 000000430 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:38:24.124 -07 000000430 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:38:24.124 -07 000000430 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:38:24.134 -07 000000430 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:38:24.134 -07 000000430 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 41 ms.
17-03-18 03:38:24.144 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:38:24.184 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:38:24.484 -07 000000430 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:38:24.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:38:24.484 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:38:24.484 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 612376232, 0x0, 559484976) start.
17-03-18 03:38:24.524 -07 000000606 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:38:24.524 -07 000000591 INF: FPGA: Recv CAMSNAP
17-03-18 03:38:24.524 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 377 ms to get response, and 384 ms overall
17-03-18 03:38:24.614 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 612376232, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:38:24.614 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:24.614 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:38:24.614 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:38:24.724 -07 000000430 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:38:24.724 -07 000000569 INF: Image SNR check: start
17-03-18 03:38:24.724 -07 000000461 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:38:24.734 -07 000000430 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:38:24.734 -07 000000430 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:38:24.734 -07 000000569 INF: Image SNR check: pass  [peak (Max-Min)=145.02]
17-03-18 03:38:24.734 -07 000000569 INF: Autofocus start
17-03-18 03:38:24.734 -07 000000569 INF: MeasureProfile start
17-03-18 03:38:24.744 -07 000000569 INF: MeasureProfile done
17-03-18 03:38:24.744 -07 000000569 INF: X=-16  Z correction [um]=-0.1496812
17-03-18 03:38:24.754 -07 000000569 INF: Autofocus finished
17-03-18 03:38:24.934 -07 000000606 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:38:24.934 -07 000000430 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-18 03:38:24.934 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.178706591955459. ----------
17-03-18 03:38:24.934 -07 000000610 INF: Cycle	115	Tile	1	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:38:24.944 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37517, sync = True, waitForSettling = True)
17-03-18 03:38:24.944 -07 000000610 INF: Z Motor: Moving to -0.171742 mm, started at -0.178707 mm, distance = 6.96 um
17-03-18 03:38:24.944 -07 000000610 INF: FPGA: Xmit ZDACW 37517\n [Z Motor]
17-03-18 03:38:24.944 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:38:24.954 -07 000000610 INF: FPGA: 'ZDACW 37517' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:38:24.954 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:24.954 -07 000000461 INF: FPGA: Recv ZDACR 37517
17-03-18 03:38:24.964 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:24.964 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:38:25.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:25.114 -07 000000569 INF: FPGA: Recv ZSGSRD 36024
17-03-18 03:38:25.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:25.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:25.124 -07 000000502 INF: FPGA: Recv ZSGSRD 36022
17-03-18 03:38:25.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:25.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:25.134 -07 000000585 INF: FPGA: Recv ZSGSRD 36019
17-03-18 03:38:25.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:25.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:25.144 -07 000000430 INF: FPGA: Recv ZSGSRD 36021
17-03-18 03:38:25.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:25.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:25.154 -07 000000461 INF: FPGA: Recv ZSGSRD 36025
17-03-18 03:38:25.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:25.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:25.164 -07 000000585 INF: FPGA: Recv ZSGSRD 36024
17-03-18 03:38:25.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:25.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:25.174 -07 000000606 INF: FPGA: Recv ZSGSRD 36025
17-03-18 03:38:25.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:25.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:25.184 -07 000000430 INF: FPGA: Recv ZSGSRD 36027
17-03-18 03:38:25.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:25.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:25.194 -07 000000569 INF: FPGA: Recv ZSGSRD 36024
17-03-18 03:38:25.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:25.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:25.204 -07 000000430 INF: FPGA: Recv ZSGSRD 36017
17-03-18 03:38:25.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:25.214 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:25.214 -07 000000430 INF: FPGA: Recv ZPIEZORD 31873
17-03-18 03:38:25.224 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:25.224 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.725 V. Piezo Error = -9.2 V.
17-03-18 03:38:25.224 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.7 um, Read 10 ADC samples: Avg = 36023 (-170.9 uncal um), Error = 0.9 uncal um, Median = 36024 (-170.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36017 (-170.8 uncal um), Max = 36027 (-170.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:38:25.224 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36023, posNoise = 4, negNoise = 6
17-03-18 03:38:25.224 -07 000000610 INF: Z Motor: After move to -0.171742, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:25.224 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 03:38:25.224 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:25.224 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:25.224 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:25.224 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:25.224 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:38:25.224 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:25.224 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:38:25.224 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:38:25.224 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:38:25.224 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:38:25.224 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:38:25.224 -07 000000606 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:38:25.234 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:38:25.234 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:38:25.244 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:38:25.244 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:38:25.254 -07 000000606 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 21 ms.
17-03-18 03:38:25.254 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:38:25.254 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:38:25.254 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:38:25.264 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 03:38:25.264 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 38 ms.
17-03-18 03:38:25.264 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 37694 150\n [Camera]
17-03-18 03:38:25.464 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:38:25.874 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:38:25.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:38:25.874 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:25.874 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:38:25.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:38:25.884 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:25.884 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:25.884 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:38:26.004 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:26.004 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 03:38:26.064 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37694 793
17-03-18 03:38:26.214 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:38:26.264 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:38:26.264 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:38:26.264 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:26.264 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:38:26.274 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:38:26.394 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:38:26.394 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:38:26.394 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:26.394 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:38:26.394 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 520 ms.
17-03-18 03:38:26.414 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:38:26.414 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:38:26.414 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:26.414 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:38:26.414 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:38:26.414 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:26.424 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:26.424 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:38:26.424 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:26.424 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) start.
17-03-18 03:38:26.594 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:38:26.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:26.604 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:38:26.604 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:38:26.604 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 37694 150' command took 2 ms to send, 1327 ms to get response, and 1338 ms overall
17-03-18 03:38:26.604 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.172060
17-03-18 03:38:26.604 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17206 mm
17-03-18 03:38:26.604 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:38:26.614 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:38:26.614 -07 000000569 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-18 03:38:26.614 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:26.824 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 401 ms.
17-03-18 03:38:26.824 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:38:26.824 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:26.824 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 03:38:26.824 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:38:26.824 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:26.834 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:26.834 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 414 ms.
17-03-18 03:38:26.834 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:26.834 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 420 ms.
17-03-18 03:38:26.844 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 37587, sync = True, waitForSettling = False)
17-03-18 03:38:26.844 -07 000000606 INF: Z Motor: Moving to -0.172062 mm, started at -0.171743 mm, distance = -0.32 um
17-03-18 03:38:26.844 -07 000000606 INF: FPGA: Xmit ZDACW 37587\n [Z Motor]
17-03-18 03:38:26.844 -07 000000430 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:38:26.844 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:38:26.844 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 229 ms to get response, and 237 ms overall
17-03-18 03:38:26.854 -07 000000569 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:26.854 -07 000000569 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:38:26.854 -07 000000569 INF: Y Motor: Moving 1331 steps2
17-03-18 03:38:26.854 -07 000000606 INF: FPGA: 'ZDACW 37587' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:38:26.854 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:38:26.864 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:26.864 -07 000000430 INF: FPGA: Recv ZDACR 37587
17-03-18 03:38:26.874 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:38:26.874 -07 000000606 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:38:27.224 -07 000000430 INF: FPGA: Recv YMVTILE
17-03-18 03:38:27.224 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:38:27.264 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:27.274 -07 000000430 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:38:27.274 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:38:27.274 -07 000000569 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:27.274 -07 000000569 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:38:27.274 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.832 mm, average velocity = 2.201 mm/sec
17-03-18 03:38:28.224 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:28.224 -07 000000591 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:38:28.234 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.234 -07 000000569 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:28.264 -07 000000569 INF: Y Motor: After move to 60.742607, error = -0.009697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:38:28.264 -07 000000569 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:38:28.264 -07 000000569 INF: Y Motor: Moved to 60.7329 after 1649 ms (table move)
17-03-18 03:38:28.264 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172062 mm (DAC = 37587)
17-03-18 03:38:28.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.264 -07 000000591 INF: FPGA: Recv ZSGSRD 36074
17-03-18 03:38:28.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:38:28.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.274 -07 000000430 INF: FPGA: Recv ZSGSRD 36066
17-03-18 03:38:28.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.284 -07 000000591 INF: FPGA: Recv ZSGSRD 36077
17-03-18 03:38:28.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.294 -07 000000424 INF: FPGA: Recv ZSGSRD 36072
17-03-18 03:38:28.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.304 -07 000000430 INF: FPGA: Recv ZSGSRD 36078
17-03-18 03:38:28.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:38:28.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.314 -07 000000606 INF: FPGA: Recv ZSGSRD 36076
17-03-18 03:38:28.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.324 -07 000000430 INF: FPGA: Recv ZSGSRD 36074
17-03-18 03:38:28.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.334 -07 000000424 INF: FPGA: Recv ZSGSRD 36078
17-03-18 03:38:28.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.344 -07 000000585 INF: FPGA: Recv ZSGSRD 36075
17-03-18 03:38:28.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.354 -07 000000424 INF: FPGA: Recv ZSGSRD 36076
17-03-18 03:38:28.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.364 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:28.364 -07 000000585 INF: FPGA: Recv ZPIEZORD 31978
17-03-18 03:38:28.374 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.374 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.735 V. Piezo Error = -9.0 V.
17-03-18 03:38:28.374 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.1 um, Read 10 ADC samples: Avg = 36075 (-171.2 uncal um), Error = 0.9 uncal um, Median = 36076 (-171.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36066 (-171.1 uncal um), Max = 36078 (-171.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:38:28.374 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36075, posNoise = 3, negNoise = 9
17-03-18 03:38:28.374 -07 000000610 INF: Z Motor: After move to -0.172062, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:28.374 -07 000000610 INF: Z Motor: Settle wait time = 1420 ms, measure time = 106 ms (allowed 150 ms), total time = 1526 ms
17-03-18 03:38:28.374 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:38:28.424 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1810 ms
17-03-18 03:38:28.424 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:38:28.424 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73291015625, Z-position -0.172076805025161. ----------
17-03-18 03:38:28.424 -07 000000610 INF: Cycle	115	Tile	2	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:38:28.424 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37410, sync = True, waitForSettling = True)
17-03-18 03:38:28.424 -07 000000610 INF: Z Motor: Moving to -0.171252 mm, started at -0.172077 mm, distance = 0.82 um
17-03-18 03:38:28.424 -07 000000610 INF: FPGA: Xmit ZDACW 37410\n [Z Motor]
17-03-18 03:38:28.424 -07 000000585 INF: FPGA: Recv ZDACW
17-03-18 03:38:28.434 -07 000000610 INF: FPGA: 'ZDACW 37410' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:38:28.434 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:28.434 -07 000000591 INF: FPGA: Recv ZDACR 37410
17-03-18 03:38:28.444 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.444 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:38:28.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.594 -07 000000430 INF: FPGA: Recv ZSGSRD 35948
17-03-18 03:38:28.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:28.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.604 -07 000000569 INF: FPGA: Recv ZSGSRD 35950
17-03-18 03:38:28.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.614 -07 000000591 INF: FPGA: Recv ZSGSRD 35953
17-03-18 03:38:28.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.624 -07 000000606 INF: FPGA: Recv ZSGSRD 35947
17-03-18 03:38:28.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.634 -07 000000569 INF: FPGA: Recv ZSGSRD 35950
17-03-18 03:38:28.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.644 -07 000000585 INF: FPGA: Recv ZSGSRD 35947
17-03-18 03:38:28.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.654 -07 000000569 INF: FPGA: Recv ZSGSRD 35946
17-03-18 03:38:28.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.664 -07 000000585 INF: FPGA: Recv ZSGSRD 35947
17-03-18 03:38:28.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.674 -07 000000569 INF: FPGA: Recv ZSGSRD 35946
17-03-18 03:38:28.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:28.684 -07 000000424 INF: FPGA: Recv ZSGSRD 35955
17-03-18 03:38:28.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:38:28.694 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:28.694 -07 000000606 INF: FPGA: Recv ZPIEZORD 31787
17-03-18 03:38:28.704 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:28.704 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.708 V. Piezo Error = -9.2 V.
17-03-18 03:38:28.704 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35949 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35948 (-170.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35946 (-170.4 uncal um), Max = 35955 (-170.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:38:28.704 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35949, posNoise = 6, negNoise = 3
17-03-18 03:38:28.704 -07 000000610 INF: Z Motor: After move to -0.171252, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:28.704 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:38:28.704 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:28.704 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:28.704 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:28.704 -07 000000585 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:28.704 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:38:28.704 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:28.704 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:38:28.704 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:38:28.704 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:38:28.704 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:38:28.704 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:38:28.704 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:38:28.714 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:38:28.714 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:38:28.714 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:38:28.714 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:38:28.724 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:38:28.724 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:38:28.724 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:38:28.724 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:38:28.724 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 37587 150\n [Camera]
17-03-18 03:38:28.924 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:38:29.334 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:38:29.334 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:38:29.334 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:29.334 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:29.334 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:38:29.344 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:38:29.344 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:38:29.344 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:29.344 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:29.344 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:38:29.414 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.018051,
17-03-18 03:38:29.534 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37587 793
17-03-18 03:38:29.684 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:38:29.744 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 401 ms.
17-03-18 03:38:29.744 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:38:29.744 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:29.744 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 03:38:29.744 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:38:29.744 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:29.744 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:29.744 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 03:38:29.744 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:29.754 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 03:38:29.874 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:38:29.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:38:29.874 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:29.994 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:38:29.994 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:38:29.994 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:29.994 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:29.994 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:38:30.004 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:30.004 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:38:30.064 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:38:30.064 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:38:30.064 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 37587 150' command took 3 ms to send, 1328 ms to get response, and 1340 ms overall
17-03-18 03:38:30.074 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.171912
17-03-18 03:38:30.074 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17191 mm
17-03-18 03:38:30.074 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:38:30.074 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:38:30.074 -07 000000606 INF: Y Motor: Moving to 61.5726 mm, started at 60.7329 mm, delta = 0.8397 mm
17-03-18 03:38:30.074 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:30.404 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:38:30.404 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:38:30.404 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:30.404 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 402 ms.
17-03-18 03:38:30.404 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:38:30.404 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:30.404 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:30.404 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:38:30.404 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 529 ms.
17-03-18 03:38:30.414 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms.
17-03-18 03:38:30.414 -07 000000585 INF: Z Motor: Entering MoveAbsStepped (DAC = 37554, sync = True, waitForSettling = False)
17-03-18 03:38:30.414 -07 000000585 INF: Z Motor: Moving to -0.171911 mm, started at -0.171267 mm, distance = -0.64 um
17-03-18 03:38:30.414 -07 000000585 INF: FPGA: Xmit ZDACW 37554\n [Z Motor]
17-03-18 03:38:30.424 -07 000000424 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:38:30.424 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:38:30.424 -07 000000585 INF: FPGA: 'ZDACW 37554' command took 0 ms to send, 3 ms to get response, and 6 ms overall
17-03-18 03:38:30.424 -07 000000585 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:30.424 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 343 ms to get response, and 349 ms overall
17-03-18 03:38:30.424 -07 000000606 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:30.424 -07 000000606 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:38:30.424 -07 000000606 INF: Y Motor: Moving 1344 steps-20
17-03-18 03:38:30.424 -07 000000424 INF: FPGA: Recv ZDACR 37554
17-03-18 03:38:30.434 -07 000000585 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:38:30.434 -07 000000585 INF: Z Motor: MoveAbsStepped took 13 ms (did NOT wait for settling yet))
17-03-18 03:38:30.434 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:38:30.804 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 03:38:30.804 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-18 03:38:30.854 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:30.854 -07 000000424 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:38:30.864 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:38:30.864 -07 000000606 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:30.864 -07 000000606 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:38:30.864 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.840 mm, average velocity = 2.192 mm/sec
17-03-18 03:38:31.594 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:38:31.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:31.814 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:31.814 -07 000000502 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:38:31.824 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:31.824 -07 000000606 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:31.844 -07 000000606 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:38:31.844 -07 000000606 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:38:31.844 -07 000000606 INF: Y Motor: Moved to 61.5640 after 1775 ms (table move)
17-03-18 03:38:31.854 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171911 mm (DAC = 37554)
17-03-18 03:38:31.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:31.854 -07 000000606 INF: FPGA: Recv ZSGSRD 36057
17-03-18 03:38:31.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:38:31.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:31.864 -07 000000569 INF: FPGA: Recv ZSGSRD 36049
17-03-18 03:38:31.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:31.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:31.874 -07 000000424 INF: FPGA: Recv ZSGSRD 36057
17-03-18 03:38:31.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:31.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:31.884 -07 000000569 INF: FPGA: Recv ZSGSRD 36055
17-03-18 03:38:31.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:31.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:31.894 -07 000000606 INF: FPGA: Recv ZSGSRD 36050
17-03-18 03:38:31.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:31.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:31.904 -07 000000585 INF: FPGA: Recv ZSGSRD 36055
17-03-18 03:38:31.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:31.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:31.914 -07 000000501 INF: FPGA: Recv ZSGSRD 36050
17-03-18 03:38:31.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:31.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:31.924 -07 000000424 INF: FPGA: Recv ZSGSRD 36045
17-03-18 03:38:31.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:31.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:31.934 -07 000000501 INF: FPGA: Recv ZSGSRD 36047
17-03-18 03:38:31.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:31.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:31.944 -07 000000585 INF: FPGA: Recv ZSGSRD 36048
17-03-18 03:38:31.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:31.954 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:31.954 -07 000000502 INF: FPGA: Recv ZPIEZORD 31971
17-03-18 03:38:31.964 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:31.964 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.730 V. Piezo Error = -9.0 V.
17-03-18 03:38:31.964 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36051 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36050 (-171.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36045 (-171.0 uncal um), Max = 36057 (-171.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:38:31.964 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36051, posNoise = 6, negNoise = 6
17-03-18 03:38:31.964 -07 000000610 INF: Z Motor: After move to -0.171911, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:31.964 -07 000000610 INF: Z Motor: Settle wait time = 1436 ms, measure time = 107 ms (allowed 150 ms), total time = 1543 ms
17-03-18 03:38:31.964 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:38:32.014 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1937 ms
17-03-18 03:38:32.014 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:38:32.014 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.171922623933759. ----------
17-03-18 03:38:32.014 -07 000000610 INF: Cycle	115	Tile	3	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:38:32.014 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37377, sync = True, waitForSettling = True)
17-03-18 03:38:32.014 -07 000000610 INF: Z Motor: Moving to -0.171101 mm, started at -0.171923 mm, distance = 0.82 um
17-03-18 03:38:32.014 -07 000000610 INF: FPGA: Xmit ZDACW 37377\n [Z Motor]
17-03-18 03:38:32.014 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:38:32.024 -07 000000610 INF: FPGA: 'ZDACW 37377' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:38:32.024 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:32.024 -07 000000585 INF: FPGA: Recv ZDACR 37377
17-03-18 03:38:32.034 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:32.034 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:38:32.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:32.184 -07 000000430 INF: FPGA: Recv ZSGSRD 35925
17-03-18 03:38:32.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:32.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:32.194 -07 000000606 INF: FPGA: Recv ZSGSRD 35927
17-03-18 03:38:32.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:32.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:32.204 -07 000000585 INF: FPGA: Recv ZSGSRD 35925
17-03-18 03:38:32.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:32.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:32.214 -07 000000424 INF: FPGA: Recv ZSGSRD 35930
17-03-18 03:38:32.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:32.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:32.224 -07 000000591 INF: FPGA: Recv ZSGSRD 35926
17-03-18 03:38:32.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:32.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:32.234 -07 000000569 INF: FPGA: Recv ZSGSRD 35922
17-03-18 03:38:32.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:32.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:32.244 -07 000000591 INF: FPGA: Recv ZSGSRD 35936
17-03-18 03:38:32.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:32.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:32.254 -07 000000591 INF: FPGA: Recv ZSGSRD 35925
17-03-18 03:38:32.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:32.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:32.264 -07 000000606 INF: FPGA: Recv ZSGSRD 35919
17-03-18 03:38:32.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:32.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:32.274 -07 000000591 INF: FPGA: Recv ZSGSRD 35924
17-03-18 03:38:32.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:32.284 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:32.284 -07 000000424 INF: FPGA: Recv ZPIEZORD 31789
17-03-18 03:38:32.294 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:32.294 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.703 V. Piezo Error = -9.1 V.
17-03-18 03:38:32.294 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35926 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35925 (-170.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35919 (-170.2 uncal um), Max = 35936 (-170.3 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:38:32.294 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35926, posNoise = 10, negNoise = 7
17-03-18 03:38:32.294 -07 000000610 INF: Z Motor: After move to -0.171101, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:32.294 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:38:32.294 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:32.294 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:32.294 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:32.294 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:32.294 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:38:32.294 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:32.294 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:38:32.294 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:38:32.294 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:38:32.294 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:38:32.294 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:38:32.294 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:38:32.294 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:38:32.294 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:38:32.304 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:38:32.304 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:38:32.304 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:38:32.304 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:38:32.304 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:38:32.304 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:38:32.314 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 37554 150\n [Camera]
17-03-18 03:38:32.514 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:38:32.924 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:38:32.924 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:38:32.924 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:32.924 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:32.924 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:38:32.924 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:38:32.924 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:38:32.924 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:32.924 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:32.924 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:38:33.114 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37554 793
17-03-18 03:38:33.264 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:38:33.304 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:38:33.304 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:38:33.304 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:33.304 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:38:33.304 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:38:33.304 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:33.314 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:33.314 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:38:33.314 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:33.314 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:38:33.454 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:38:33.464 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:38:33.464 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:33.464 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:33.464 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) start.
17-03-18 03:38:33.464 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:38:33.464 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:38:33.464 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:33.584 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:33.584 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:38:33.654 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:38:33.654 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:38:33.654 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 37554 150' command took 2 ms to send, 1331 ms to get response, and 1338 ms overall
17-03-18 03:38:33.654 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:38:33.654 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56396484375, Z-Position -0.171119597416039. ------
17-03-18 03:38:33.654 -07 000000585 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17743 mm
17-03-18 03:38:33.654 -07 000000585 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:38:33.654 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:38:33.664 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:38:33.664 -07 000000430 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 03:38:33.664 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:38:33.664 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:38:33.664 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:33.664 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 38759, sync = True, waitForSettling = False)
17-03-18 03:38:33.664 -07 000000424 INF: Z Motor: Moving to -0.177427 mm, started at -0.171120 mm, distance = -6.31 um
17-03-18 03:38:33.664 -07 000000626 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:38:33.674 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:33.674 -07 000000430 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:33.674 -07 000000430 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:38:33.674 -07 000000430 INF: Y Motor: Moving 1342 steps-18
17-03-18 03:38:33.674 -07 000000606 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:38:33.684 -07 000000424 INF: FPGA: Xmit ZDACW 38759\n [Z Motor]
17-03-18 03:38:33.684 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:38:33.694 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:38:33.694 -07 000000424 INF: FPGA: 'ZDACW 38759' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:38:33.704 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:33.704 -07 000000569 INF: FPGA: Recv ZDACR 38759
17-03-18 03:38:33.714 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:38:33.714 -07 000000424 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-18 03:38:33.844 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:38:33.844 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:38:33.844 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:33.844 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:38:33.844 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:38:33.874 -07 000000626 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:38:33.874 -07 000000606 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 194 ms to get response, and 212 ms overall
17-03-18 03:38:33.974 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:38:33.974 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:38:33.974 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:33.974 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:38:33.974 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 515 ms.
17-03-18 03:38:34.074 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:38:34.074 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 399 ms overall
17-03-18 03:38:34.114 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:34.114 -07 000000444 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:38:34.124 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:38:34.124 -07 000000430 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:34.124 -07 000000430 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:38:34.124 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.839 mm, average velocity = 2.102 mm/sec
17-03-18 03:38:34.774 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.028963,
17-03-18 03:38:35.074 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:35.074 -07 000000444 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:38:35.084 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:35.084 -07 000000430 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:35.114 -07 000000430 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:38:35.114 -07 000000430 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:38:35.114 -07 000000430 INF: Y Motor: Moved to 62.3955 after 1449 ms (table move)
17-03-18 03:38:35.114 -07 000000585 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177427 mm (DAC = 38759)
17-03-18 03:38:35.134 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:35.134 -07 000000430 INF: FPGA: Recv ZSGSRD 36903
17-03-18 03:38:35.144 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:38:35.144 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:35.144 -07 000000569 INF: FPGA: Recv ZSGSRD 36904
17-03-18 03:38:35.154 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:35.154 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:35.154 -07 000000501 INF: FPGA: Recv ZSGSRD 36906
17-03-18 03:38:35.164 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:35.164 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:35.164 -07 000000501 INF: FPGA: Recv ZSGSRD 36908
17-03-18 03:38:35.174 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:35.174 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:35.174 -07 000000444 INF: FPGA: Recv ZSGSRD 36912
17-03-18 03:38:35.184 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:35.184 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:35.184 -07 000000569 INF: FPGA: Recv ZSGSRD 36912
17-03-18 03:38:35.194 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:35.194 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:35.194 -07 000000444 INF: FPGA: Recv ZSGSRD 36906
17-03-18 03:38:35.204 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:35.204 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:35.204 -07 000000569 INF: FPGA: Recv ZSGSRD 36916
17-03-18 03:38:35.214 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:35.214 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:35.214 -07 000000430 INF: FPGA: Recv ZSGSRD 36905
17-03-18 03:38:35.224 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:35.224 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:35.224 -07 000000569 INF: FPGA: Recv ZSGSRD 36902
17-03-18 03:38:35.234 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:35.234 -07 000000585 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:35.234 -07 000000430 INF: FPGA: Recv ZPIEZORD 33065
17-03-18 03:38:35.244 -07 000000585 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:35.244 -07 000000585 INF: Z Motor: Piezo is near 50.6 V (nominally 0 to 100 V), expect near 59.1 V, since DAC is at 5.914 V. Piezo Error = -8.5 V.
17-03-18 03:38:35.244 -07 000000585 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.4 um, Read 10 ADC samples: Avg = 36907 (-176.5 uncal um), Error = 0.9 uncal um, Median = 36906 (-176.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36902 (-176.5 uncal um), Max = 36916 (-176.6 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:38:35.244 -07 000000585 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36907, posNoise = 9, negNoise = 5
17-03-18 03:38:35.244 -07 000000585 INF: Z Motor: After move to -0.177427, error = 0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:35.244 -07 000000585 INF: Z Motor: Settle wait time = 1451 ms, measure time = 127 ms (allowed 150 ms), total time = 1578 ms
17-03-18 03:38:35.244 -07 000000585 INF: Z Motor: Waiting extra 23 ms after reading position to reach expected total of 150 ms
17-03-18 03:38:35.274 -07 000000585 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:38:35.274 -07 000000585 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:38:35.274 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:35.274 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:35.274 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:35.274 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:35.274 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:38:35.274 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:35.274 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:38:35.274 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:38:35.284 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:38:35.284 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:38:35.294 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:38:35.294 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 03:38:35.294 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:38:35.344 -07 000000430 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:38:35.644 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:38:35.644 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:38:35.644 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:38:35.644 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) start.
17-03-18 03:38:35.684 -07 000000444 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:38:35.684 -07 000000501 INF: FPGA: Recv CAMSNAP
17-03-18 03:38:35.684 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 384 ms overall
17-03-18 03:38:35.774 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:38:35.774 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:35.774 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:38:35.774 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:38:35.784 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:38:35.784 -07 000000585 INF: Autofocus start
17-03-18 03:38:35.784 -07 000000585 INF: MeasureProfile start
17-03-18 03:38:35.784 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:38:35.794 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:38:35.794 -07 000000591 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:38:35.794 -07 000000585 INF: MeasureProfile done
17-03-18 03:38:35.794 -07 000000585 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:38:35.794 -07 000000585 INF: Autofocus finished
17-03-18 03:38:35.994 -07 000000569 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:38:35.994 -07 000000591 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 205 ms overall
17-03-18 03:38:35.994 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.177421749527107. ----------
17-03-18 03:38:36.004 -07 000000610 INF: Cycle	115	Tile	4	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:38:36.004 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37274, sync = True, waitForSettling = True)
17-03-18 03:38:36.004 -07 000000610 INF: Z Motor: Moving to -0.170629 mm, started at -0.177422 mm, distance = 6.79 um
17-03-18 03:38:36.004 -07 000000610 INF: FPGA: Xmit ZDACW 37274\n [Z Motor]
17-03-18 03:38:36.004 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:38:36.014 -07 000000610 INF: FPGA: 'ZDACW 37274' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:38:36.014 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:36.014 -07 000000626 INF: FPGA: Recv ZDACR 37274
17-03-18 03:38:36.024 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:36.024 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:38:36.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:36.174 -07 000000501 INF: FPGA: Recv ZSGSRD 35850
17-03-18 03:38:36.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:36.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:36.184 -07 000000461 INF: FPGA: Recv ZSGSRD 35848
17-03-18 03:38:36.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:36.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:36.194 -07 000000591 INF: FPGA: Recv ZSGSRD 35854
17-03-18 03:38:36.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:36.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:36.204 -07 000000585 INF: FPGA: Recv ZSGSRD 35854
17-03-18 03:38:36.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:36.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:36.214 -07 000000444 INF: FPGA: Recv ZSGSRD 35848
17-03-18 03:38:36.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:36.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:36.224 -07 000000461 INF: FPGA: Recv ZSGSRD 35849
17-03-18 03:38:36.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:36.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:36.234 -07 000000444 INF: FPGA: Recv ZSGSRD 35859
17-03-18 03:38:36.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:36.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:36.244 -07 000000585 INF: FPGA: Recv ZSGSRD 35857
17-03-18 03:38:36.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:38:36.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:36.254 -07 000000569 INF: FPGA: Recv ZSGSRD 35851
17-03-18 03:38:36.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:36.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:36.264 -07 000000444 INF: FPGA: Recv ZSGSRD 35849
17-03-18 03:38:36.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:36.274 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:36.274 -07 000000461 INF: FPGA: Recv ZPIEZORD 31684
17-03-18 03:38:36.284 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:36.284 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.688 V. Piezo Error = -9.2 V.
17-03-18 03:38:36.284 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.6 um, Read 10 ADC samples: Avg = 35852 (-169.8 uncal um), Error = 0.9 uncal um, Median = 35850 (-169.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35848 (-169.7 uncal um), Max = 35859 (-169.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:38:36.284 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35852, posNoise = 7, negNoise = 4
17-03-18 03:38:36.284 -07 000000610 INF: Z Motor: After move to -0.170629, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:36.284 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:38:36.284 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:36.284 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:36.284 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:36.284 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:38:36.284 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:36.284 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:36.284 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:38:36.284 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:38:36.284 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:38:36.284 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:38:36.284 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:38:36.284 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:38:36.284 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:38:36.284 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:38:36.294 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:38:36.294 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:38:36.304 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:38:36.304 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:38:36.304 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:38:36.304 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:38:36.314 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 37451 150\n [Camera]
17-03-18 03:38:36.514 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:38:36.594 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:38:36.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:36.914 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:38:36.914 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:38:36.924 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:36.924 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:36.924 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:38:36.924 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:38:36.924 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:38:36.924 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:36.924 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:36.924 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:38:37.114 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37451 793
17-03-18 03:38:37.264 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:38:37.304 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:38:37.304 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:38:37.304 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:37.304 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:38:37.304 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:38:37.304 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:37.304 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:38:37.304 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:38:37.304 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:38:37.324 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:38:37.454 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:38:37.454 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:38:37.454 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:37.454 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:37.454 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:38:37.464 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:38:37.464 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:38:37.464 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:37.464 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:37.464 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) start.
17-03-18 03:38:37.644 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:38:37.654 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:38:37.654 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 37451 150' command took 2 ms to send, 1330 ms to get response, and 1339 ms overall
17-03-18 03:38:37.654 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171118
17-03-18 03:38:37.654 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17112 mm
17-03-18 03:38:37.654 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:38:37.654 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:38:37.654 -07 000000444 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 03:38:37.654 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:37.844 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:38:37.844 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:38:37.844 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:37.844 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:38:37.844 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:38:37.844 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:37.844 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:37.854 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 03:38:37.854 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:38:37.854 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:38:37.864 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 37381, sync = True, waitForSettling = False)
17-03-18 03:38:37.864 -07 000000569 INF: Z Motor: Moving to -0.171119 mm, started at -0.170644 mm, distance = -0.48 um
17-03-18 03:38:37.864 -07 000000569 INF: FPGA: Xmit ZDACW 37381\n [Z Motor]
17-03-18 03:38:37.864 -07 000000591 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:38:37.864 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:38:37.864 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 206 ms to get response, and 209 ms overall
17-03-18 03:38:37.864 -07 000000444 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:37.864 -07 000000444 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:38:37.864 -07 000000444 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:38:37.874 -07 000000569 INF: FPGA: 'ZDACW 37381' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:38:37.874 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:38:37.884 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:37.884 -07 000000591 INF: FPGA: Recv ZDACR 37381
17-03-18 03:38:37.894 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:38:37.894 -07 000000569 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet))
17-03-18 03:38:38.244 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-18 03:38:38.244 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 381 ms overall
17-03-18 03:38:38.294 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:38.304 -07 000000569 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:38:38.304 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:38:38.304 -07 000000444 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:38.304 -07 000000444 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:38:38.304 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.837 mm, average velocity = 2.197 mm/sec
17-03-18 03:38:39.254 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:39.254 -07 000000591 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:38:39.264 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.264 -07 000000444 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:39.294 -07 000000444 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:38:39.294 -07 000000444 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:38:39.294 -07 000000444 INF: Y Motor: Moved to 63.2241 after 1633 ms (table move)
17-03-18 03:38:39.294 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171119 mm (DAC = 37381)
17-03-18 03:38:39.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.294 -07 000000591 INF: FPGA: Recv ZSGSRD 35932
17-03-18 03:38:39.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:38:39.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.304 -07 000000591 INF: FPGA: Recv ZSGSRD 35922
17-03-18 03:38:39.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.314 -07 000000569 INF: FPGA: Recv ZSGSRD 35935
17-03-18 03:38:39.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.324 -07 000000424 INF: FPGA: Recv ZSGSRD 35928
17-03-18 03:38:39.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.334 -07 000000444 INF: FPGA: Recv ZSGSRD 35932
17-03-18 03:38:39.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.344 -07 000000424 INF: FPGA: Recv ZSGSRD 35929
17-03-18 03:38:39.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:38:39.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.354 -07 000000591 INF: FPGA: Recv ZSGSRD 35930
17-03-18 03:38:39.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.364 -07 000000444 INF: FPGA: Recv ZSGSRD 35925
17-03-18 03:38:39.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.374 -07 000000591 INF: FPGA: Recv ZSGSRD 35918
17-03-18 03:38:39.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.384 -07 000000424 INF: FPGA: Recv ZSGSRD 35928
17-03-18 03:38:39.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.394 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:39.394 -07 000000591 INF: FPGA: Recv ZPIEZORD 31819
17-03-18 03:38:39.404 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.404 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.704 V. Piezo Error = -9.1 V.
17-03-18 03:38:39.404 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35928 (-170.3 uncal um), Error = 0.9 uncal um, Median = 35928 (-170.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35918 (-170.2 uncal um), Max = 35935 (-170.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:38:39.404 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35928, posNoise = 7, negNoise = 10
17-03-18 03:38:39.404 -07 000000610 INF: Z Motor: After move to -0.171119, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:39.404 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 108 ms (allowed 150 ms), total time = 1538 ms
17-03-18 03:38:39.404 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:38:39.454 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1796 ms
17-03-18 03:38:39.454 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:38:39.454 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.171132445840323. ----------
17-03-18 03:38:39.454 -07 000000610 INF: Cycle	115	Tile	5	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:38:39.454 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37204, sync = True, waitForSettling = True)
17-03-18 03:38:39.454 -07 000000610 INF: Z Motor: Moving to -0.170309 mm, started at -0.171132 mm, distance = 0.82 um
17-03-18 03:38:39.454 -07 000000610 INF: FPGA: Xmit ZDACW 37204\n [Z Motor]
17-03-18 03:38:39.454 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:38:39.464 -07 000000610 INF: FPGA: 'ZDACW 37204' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:38:39.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:39.464 -07 000000444 INF: FPGA: Recv ZDACR 37204
17-03-18 03:38:39.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:38:39.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.624 -07 000000591 INF: FPGA: Recv ZSGSRD 35806
17-03-18 03:38:39.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:39.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.634 -07 000000424 INF: FPGA: Recv ZSGSRD 35807
17-03-18 03:38:39.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.644 -07 000000591 INF: FPGA: Recv ZSGSRD 35806
17-03-18 03:38:39.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.654 -07 000000444 INF: FPGA: Recv ZSGSRD 35804
17-03-18 03:38:39.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.664 -07 000000591 INF: FPGA: Recv ZSGSRD 35800
17-03-18 03:38:39.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.674 -07 000000444 INF: FPGA: Recv ZSGSRD 35796
17-03-18 03:38:39.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.684 -07 000000591 INF: FPGA: Recv ZSGSRD 35806
17-03-18 03:38:39.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.694 -07 000000444 INF: FPGA: Recv ZSGSRD 35810
17-03-18 03:38:39.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.704 -07 000000591 INF: FPGA: Recv ZSGSRD 35800
17-03-18 03:38:39.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:39.714 -07 000000444 INF: FPGA: Recv ZSGSRD 35802
17-03-18 03:38:39.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:39.724 -07 000000502 INF: FPGA: Recv ZPIEZORD 31697
17-03-18 03:38:39.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:39.734 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.677 V. Piezo Error = -9.1 V.
17-03-18 03:38:39.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.3 um, Read 10 ADC samples: Avg = 35804 (-169.5 uncal um), Error = 0.8 uncal um, Median = 35805 (-169.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35796 (-169.4 uncal um), Max = 35810 (-169.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:38:39.734 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35804, posNoise = 6, negNoise = 8
17-03-18 03:38:39.734 -07 000000610 INF: Z Motor: After move to -0.170309, error = -0.000027, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:39.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:38:39.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:39.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:39.734 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:39.734 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:38:39.734 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:39.734 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:39.734 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:38:39.734 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:38:39.734 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:38:39.734 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:38:39.734 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:38:39.734 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:38:39.744 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:38:39.744 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:38:39.744 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:38:39.744 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:38:39.744 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:38:39.744 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:38:39.754 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:38:39.754 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:38:39.754 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 37381 150\n [Camera]
17-03-18 03:38:39.954 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:38:40.154 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.988112,
17-03-18 03:38:40.364 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:38:40.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:38:40.364 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:40.364 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:40.364 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) start.
17-03-18 03:38:40.364 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:38:40.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:38:40.364 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:40.364 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:40.364 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:38:40.554 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37381 793
17-03-18 03:38:40.704 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:38:40.734 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:38:40.734 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:38:40.734 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:40.734 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:38:40.734 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:38:40.734 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:38:40.734 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:40.744 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:40.744 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:38:40.744 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:38:40.894 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:38:40.894 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:38:40.904 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:40.904 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:40.904 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:38:40.904 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:38:40.904 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:38:40.904 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:40.904 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:40.904 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:38:41.094 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:38:41.094 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:38:41.094 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 37381 150' command took 2 ms to send, 1331 ms to get response, and 1339 ms overall
17-03-18 03:38:41.214 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.170783
17-03-18 03:38:41.214 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17078 mm
17-03-18 03:38:41.214 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:38:41.214 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 37308, sync = True, waitForSettling = False)
17-03-18 03:38:41.214 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:38:41.214 -07 000000611 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 03:38:41.214 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:41.224 -07 000000606 INF: Z Motor: Moving to -0.170785 mm, started at -0.170336 mm, distance = -0.45 um
17-03-18 03:38:41.224 -07 000000606 INF: FPGA: Xmit ZDACW 37308\n [Z Motor]
17-03-18 03:38:41.224 -07 000000430 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:38:41.224 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:38:41.224 -07 000000611 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:41.224 -07 000000611 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:38:41.224 -07 000000611 INF: Y Motor: Moving 1342 steps-18
17-03-18 03:38:41.224 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:38:41.234 -07 000000606 INF: FPGA: 'ZDACW 37308' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:41.234 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:41.234 -07 000000461 INF: FPGA: Recv ZDACR 37308
17-03-18 03:38:41.244 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:38:41.244 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:41.244 -07 000000606 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 03:38:41.294 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 03:38:41.294 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:38:41.294 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:41.294 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 394 ms.
17-03-18 03:38:41.294 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:38:41.294 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:41.304 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:41.304 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:38:41.304 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:41.304 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-18 03:38:41.594 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:38:41.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:41.614 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-18 03:38:41.614 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-18 03:38:41.664 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:41.664 -07 000000444 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:38:41.674 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:38:41.674 -07 000000611 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:41.674 -07 000000611 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-18 03:38:41.674 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.838 mm, average velocity = 2.123 mm/sec
17-03-18 03:38:42.624 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:42.624 -07 000000444 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:38:42.634 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:42.634 -07 000000611 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:42.654 -07 000000611 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:38:42.654 -07 000000611 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:38:42.654 -07 000000611 INF: Y Motor: Moved to 64.0571 after 1436 ms (table move)
17-03-18 03:38:42.654 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170785 mm (DAC = 37308)
17-03-18 03:38:42.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.664 -07 000000424 INF: FPGA: Recv ZSGSRD 35881
17-03-18 03:38:42.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:38:42.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.664 -07 000000626 INF: FPGA: Recv ZSGSRD 35870
17-03-18 03:38:42.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:38:42.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.674 -07 000000502 INF: FPGA: Recv ZSGSRD 35877
17-03-18 03:38:42.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:42.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.684 -07 000000606 INF: FPGA: Recv ZSGSRD 35879
17-03-18 03:38:42.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:42.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.694 -07 000000591 INF: FPGA: Recv ZSGSRD 35876
17-03-18 03:38:42.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:42.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.704 -07 000000606 INF: FPGA: Recv ZSGSRD 35880
17-03-18 03:38:42.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:42.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.714 -07 000000591 INF: FPGA: Recv ZSGSRD 35884
17-03-18 03:38:42.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:42.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.724 -07 000000606 INF: FPGA: Recv ZSGSRD 35874
17-03-18 03:38:42.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:42.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.734 -07 000000430 INF: FPGA: Recv ZSGSRD 35872
17-03-18 03:38:42.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:42.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.744 -07 000000502 INF: FPGA: Recv ZSGSRD 35869
17-03-18 03:38:42.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:42.754 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:42.754 -07 000000606 INF: FPGA: Recv ZPIEZORD 31765
17-03-18 03:38:42.764 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:42.764 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.693 V. Piezo Error = -9.1 V.
17-03-18 03:38:42.764 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.8 um, Read 10 ADC samples: Avg = 35876 (-169.9 uncal um), Error = 0.9 uncal um, Median = 35876 (-169.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35869 (-169.9 uncal um), Max = 35884 (-170.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:38:42.764 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35876, posNoise = 8, negNoise = 7
17-03-18 03:38:42.764 -07 000000610 INF: Z Motor: After move to -0.170785, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:42.764 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 102 ms (allowed 150 ms), total time = 1540 ms
17-03-18 03:38:42.764 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-18 03:38:42.814 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-18 03:38:42.814 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:38:42.814 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.170798386808951. ----------
17-03-18 03:38:42.814 -07 000000610 INF: Cycle	115	Tile	6	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:38:42.814 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37131, sync = True, waitForSettling = True)
17-03-18 03:38:42.814 -07 000000610 INF: Z Motor: Moving to -0.169975 mm, started at -0.170798 mm, distance = 0.82 um
17-03-18 03:38:42.814 -07 000000610 INF: FPGA: Xmit ZDACW 37131\n [Z Motor]
17-03-18 03:38:42.814 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:38:42.824 -07 000000610 INF: FPGA: 'ZDACW 37131' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:38:42.824 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:42.824 -07 000000502 INF: FPGA: Recv ZDACR 37131
17-03-18 03:38:42.834 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:42.834 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:38:42.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.984 -07 000000430 INF: FPGA: Recv ZSGSRD 35751
17-03-18 03:38:42.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:42.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:42.994 -07 000000430 INF: FPGA: Recv ZSGSRD 35752
17-03-18 03:38:43.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:43.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:43.004 -07 000000430 INF: FPGA: Recv ZSGSRD 35752
17-03-18 03:38:43.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:43.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:43.014 -07 000000502 INF: FPGA: Recv ZSGSRD 35748
17-03-18 03:38:43.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:43.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:43.024 -07 000000606 INF: FPGA: Recv ZSGSRD 35753
17-03-18 03:38:43.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:43.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:43.034 -07 000000502 INF: FPGA: Recv ZSGSRD 35756
17-03-18 03:38:43.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:43.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:43.044 -07 000000606 INF: FPGA: Recv ZSGSRD 35747
17-03-18 03:38:43.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:43.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:43.054 -07 000000430 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:38:43.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:43.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:43.064 -07 000000430 INF: FPGA: Recv ZSGSRD 35752
17-03-18 03:38:43.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:43.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:43.074 -07 000000606 INF: FPGA: Recv ZSGSRD 35748
17-03-18 03:38:43.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:43.084 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:43.084 -07 000000430 INF: FPGA: Recv ZPIEZORD 31570
17-03-18 03:38:43.094 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:43.094 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.666 V. Piezo Error = -9.2 V.
17-03-18 03:38:43.094 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35750 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35752 (-169.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35745 (-169.1 uncal um), Max = 35756 (-169.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:38:43.094 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35750, posNoise = 6, negNoise = 5
17-03-18 03:38:43.094 -07 000000610 INF: Z Motor: After move to -0.169975, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:43.094 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:38:43.094 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:43.094 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:43.094 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:43.094 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:38:43.094 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:43.094 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:38:43.094 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:38:43.094 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:43.094 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:38:43.094 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:38:43.094 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:38:43.094 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:38:43.104 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:38:43.104 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:38:43.104 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:38:43.104 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:38:43.114 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:38:43.114 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:38:43.114 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:38:43.114 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:38:43.124 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 37308 150\n [Camera]
17-03-18 03:38:43.324 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:38:43.724 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:38:43.734 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:38:43.734 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:43.734 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:38:43.734 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:38:43.734 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:43.744 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:43.744 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:38:43.744 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:43.744 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:38:43.924 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37308 793
17-03-18 03:38:44.074 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:38:44.114 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 368 ms.
17-03-18 03:38:44.114 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-18 03:38:44.114 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:44.114 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:38:44.114 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:38:44.114 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:44.114 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:44.114 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:38:44.114 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:38:44.124 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:38:44.264 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:38:44.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:38:44.264 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:44.264 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:44.264 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) start.
17-03-18 03:38:44.274 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:38:44.274 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:38:44.274 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:44.274 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:44.274 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) start.
17-03-18 03:38:44.454 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:38:44.464 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:38:44.464 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 37308 150' command took 2 ms to send, 1330 ms to get response, and 1338 ms overall
17-03-18 03:38:44.464 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.170430
17-03-18 03:38:44.464 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17043 mm
17-03-18 03:38:44.464 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:38:44.464 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:38:44.464 -07 000000444 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 03:38:44.464 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:44.464 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 37230, sync = True, waitForSettling = False)
17-03-18 03:38:44.464 -07 000000569 INF: Z Motor: Moving to -0.170428 mm, started at -0.169989 mm, distance = -0.44 um
17-03-18 03:38:44.464 -07 000000585 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:38:44.474 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:38:44.474 -07 000000444 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:44.474 -07 000000444 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:38:44.474 -07 000000444 INF: Y Motor: Moving 1337 steps-11
17-03-18 03:38:44.474 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:38:44.484 -07 000000569 INF: FPGA: Xmit ZDACW 37230\n [Z Motor]
17-03-18 03:38:44.484 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:38:44.494 -07 000000569 INF: FPGA: 'ZDACW 37230' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 03:38:44.494 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:44.494 -07 000000502 INF: FPGA: Recv ZDACR 37230
17-03-18 03:38:44.504 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:44.504 -07 000000569 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet))
17-03-18 03:38:44.654 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:38:44.654 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:38:44.654 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:44.654 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:38:44.654 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:38:44.654 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:44.664 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:44.664 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:44.664 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:38:44.664 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:38:44.854 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:38:44.854 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 379 ms overall
17-03-18 03:38:44.894 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:44.904 -07 000000502 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:38:44.904 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:38:44.904 -07 000000444 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:44.904 -07 000000444 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:38:44.904 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 379 ms, distance = 0.835 mm, average velocity = 2.204 mm/sec
17-03-18 03:38:45.514 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.964938,
17-03-18 03:38:45.854 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:45.854 -07 000000611 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:38:45.864 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:45.864 -07 000000444 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:45.894 -07 000000444 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:38:45.894 -07 000000444 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:38:45.894 -07 000000444 INF: Y Motor: Moved to 64.8789 after 1426 ms (table move)
17-03-18 03:38:45.894 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170428 mm (DAC = 37230)
17-03-18 03:38:45.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:45.894 -07 000000502 INF: FPGA: Recv ZSGSRD 35824
17-03-18 03:38:45.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:38:45.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:45.904 -07 000000424 INF: FPGA: Recv ZSGSRD 35816
17-03-18 03:38:45.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:45.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:45.914 -07 000000502 INF: FPGA: Recv ZSGSRD 35824
17-03-18 03:38:45.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:45.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:45.924 -07 000000611 INF: FPGA: Recv ZSGSRD 35824
17-03-18 03:38:45.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:45.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:45.934 -07 000000461 INF: FPGA: Recv ZSGSRD 35824
17-03-18 03:38:45.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:45.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:45.944 -07 000000611 INF: FPGA: Recv ZSGSRD 35824
17-03-18 03:38:45.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:45.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:45.954 -07 000000569 INF: FPGA: Recv ZSGSRD 35815
17-03-18 03:38:45.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:45.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:45.964 -07 000000569 INF: FPGA: Recv ZSGSRD 35814
17-03-18 03:38:45.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:45.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:45.974 -07 000000569 INF: FPGA: Recv ZSGSRD 35820
17-03-18 03:38:45.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:45.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:45.984 -07 000000569 INF: FPGA: Recv ZSGSRD 35821
17-03-18 03:38:45.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:45.994 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:45.994 -07 000000569 INF: FPGA: Recv ZPIEZORD 31672
17-03-18 03:38:46.004 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.004 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.681 V. Piezo Error = -9.1 V.
17-03-18 03:38:46.004 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35821 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35822 (-169.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35814 (-169.5 uncal um), Max = 35824 (-169.6 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:38:46.004 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35821, posNoise = 3, negNoise = 7
17-03-18 03:38:46.004 -07 000000610 INF: Z Motor: After move to -0.170428, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:46.004 -07 000000610 INF: Z Motor: Settle wait time = 1427 ms, measure time = 107 ms (allowed 150 ms), total time = 1534 ms
17-03-18 03:38:46.004 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:38:46.054 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1587 ms
17-03-18 03:38:46.054 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:38:46.054 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.170445055141154. ----------
17-03-18 03:38:46.054 -07 000000610 INF: Cycle	115	Tile	7	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:38:46.054 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37054, sync = True, waitForSettling = True)
17-03-18 03:38:46.054 -07 000000610 INF: Z Motor: Moving to -0.169622 mm, started at -0.170445 mm, distance = 0.82 um
17-03-18 03:38:46.054 -07 000000610 INF: FPGA: Xmit ZDACW 37054\n [Z Motor]
17-03-18 03:38:46.054 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:38:46.064 -07 000000610 INF: FPGA: 'ZDACW 37054' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:38:46.064 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:46.064 -07 000000502 INF: FPGA: Recv ZDACR 37054
17-03-18 03:38:46.074 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.074 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:38:46.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:46.224 -07 000000502 INF: FPGA: Recv ZSGSRD 35698
17-03-18 03:38:46.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:46.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:46.234 -07 000000502 INF: FPGA: Recv ZSGSRD 35697
17-03-18 03:38:46.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:46.244 -07 000000502 INF: FPGA: Recv ZSGSRD 35694
17-03-18 03:38:46.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:46.254 -07 000000591 INF: FPGA: Recv ZSGSRD 35695
17-03-18 03:38:46.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:46.264 -07 000000424 INF: FPGA: Recv ZSGSRD 35695
17-03-18 03:38:46.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:46.274 -07 000000501 INF: FPGA: Recv ZSGSRD 35690
17-03-18 03:38:46.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:46.284 -07 000000501 INF: FPGA: Recv ZSGSRD 35697
17-03-18 03:38:46.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:46.294 -07 000000501 INF: FPGA: Recv ZSGSRD 35695
17-03-18 03:38:46.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:46.304 -07 000000444 INF: FPGA: Recv ZSGSRD 35695
17-03-18 03:38:46.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:46.314 -07 000000591 INF: FPGA: Recv ZSGSRD 35698
17-03-18 03:38:46.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.324 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:46.324 -07 000000424 INF: FPGA: Recv ZPIEZORD 31522
17-03-18 03:38:46.334 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:46.334 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.654 V. Piezo Error = -9.2 V.
17-03-18 03:38:46.334 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.6 um, Read 10 ADC samples: Avg = 35695 (-168.8 uncal um), Error = 0.9 uncal um, Median = 35695 (-168.8 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35690 (-168.7 uncal um), Max = 35698 (-168.8 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:38:46.334 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35695, posNoise = 3, negNoise = 5
17-03-18 03:38:46.334 -07 000000610 INF: Z Motor: After move to -0.169622, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:46.334 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:38:46.334 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:46.334 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:46.334 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:46.334 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:38:46.334 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:46.334 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:46.334 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:38:46.334 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:38:46.334 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:38:46.334 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:38:46.334 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:38:46.334 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:38:46.344 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:38:46.344 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:38:46.344 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:38:46.344 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:38:46.354 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:38:46.354 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:38:46.354 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:38:46.354 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:38:46.354 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 37230 150\n [Camera]
17-03-18 03:38:46.554 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:38:46.594 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:38:46.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:46.964 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:38:46.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:38:46.964 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:46.964 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:46.964 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) start.
17-03-18 03:38:46.974 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:38:46.974 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:38:46.974 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:46.974 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:46.974 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:38:47.164 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37230 793
17-03-18 03:38:47.304 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:38:47.354 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:38:47.354 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:38:47.354 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:47.354 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:38:47.354 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:38:47.354 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:47.354 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:38:47.354 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:38:47.364 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:38:47.364 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:38:47.524 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:38:47.524 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:38:47.524 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:38:47.524 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:38:47.524 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:47.524 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:47.524 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:47.524 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) start.
17-03-18 03:38:47.534 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:47.534 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:38:47.704 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1335
17-03-18 03:38:47.704 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:38:47.704 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 37230 150' command took 2 ms to send, 1331 ms to get response, and 1342 ms overall
17-03-18 03:38:47.704 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:38:47.704 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87890625, Z-Position -0.169635604411292. ------
17-03-18 03:38:47.704 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:38:47.704 -07 000000424 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17606 mm
17-03-18 03:38:47.704 -07 000000424 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:38:47.904 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:38:47.904 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:38:47.904 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:47.904 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 03:38:47.904 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-18 03:38:47.904 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:47.914 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:38:47.914 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:38:47.914 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:38:47.914 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:38:47.924 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:38:47.924 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 211 ms to get response, and 215 ms overall
17-03-18 03:38:47.924 -07 000000591 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:38:47.924 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:38:47.924 -07 000000501 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-18 03:38:47.924 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 38461, sync = True, waitForSettling = False)
17-03-18 03:38:47.924 -07 000000444 INF: Z Motor: Moving to -0.176063 mm, started at -0.169636 mm, distance = -6.43 um
17-03-18 03:38:47.934 -07 000000444 INF: FPGA: Xmit ZDACW 38461\n [Z Motor]
17-03-18 03:38:47.944 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:48.824 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:38:48.824 -07 000000626 INF: FPGA: Recv YRDPOS 132873
17-03-18 03:38:48.824 -07 000000626 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:38:48.824 -07 000000591 INF: FPGA: 'FOCMRRFOC' command took 2 ms to send, 890 ms to get response, and 898 ms overall
17-03-18 03:38:48.824 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 870 ms to get response, and 894 ms overall
17-03-18 03:38:48.824 -07 000000501 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:48.824 -07 000000444 INF: FPGA: 'ZDACW 38461' command took 0 ms to send, 880 ms to get response, and 890 ms overall
17-03-18 03:38:48.824 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:48.824 -07 000000626 INF: FPGA: Recv ZDACR 38461
17-03-18 03:38:48.824 -07 000000501 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:38:48.824 -07 000000501 INF: Y Motor: Moving 1349 steps-28
17-03-18 03:38:48.834 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:38:48.834 -07 000000444 INF: Z Motor: MoveAbsStepped took 900 ms (did NOT wait for settling yet))
17-03-18 03:38:48.834 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:38:49.204 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-18 03:38:49.204 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 382 ms overall
17-03-18 03:38:49.254 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:49.254 -07 000000585 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:38:49.264 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:38:49.264 -07 000000501 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:49.264 -07 000000501 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:38:49.264 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 382 ms, distance = 0.844 mm, average velocity = 2.209 mm/sec
17-03-18 03:38:50.214 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:50.214 -07 000000611 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:38:50.224 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:50.224 -07 000000501 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:50.254 -07 000000501 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:38:50.254 -07 000000501 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:38:50.254 -07 000000501 INF: Y Motor: Moved to 65.7144 after 2326 ms (table move)
17-03-18 03:38:50.254 -07 000000424 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176063 mm (DAC = 38461)
17-03-18 03:38:50.254 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:50.254 -07 000000611 INF: FPGA: Recv ZSGSRD 36700
17-03-18 03:38:50.264 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:38:50.264 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:50.264 -07 000000585 INF: FPGA: Recv ZSGSRD 36701
17-03-18 03:38:50.274 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:50.274 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:50.274 -07 000000611 INF: FPGA: Recv ZSGSRD 36702
17-03-18 03:38:50.284 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:50.284 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:50.284 -07 000000585 INF: FPGA: Recv ZSGSRD 36696
17-03-18 03:38:50.294 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:50.294 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:50.294 -07 000000611 INF: FPGA: Recv ZSGSRD 36692
17-03-18 03:38:50.304 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:50.304 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:50.304 -07 000000626 INF: FPGA: Recv ZSGSRD 36697
17-03-18 03:38:50.314 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:50.314 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:50.314 -07 000000444 INF: FPGA: Recv ZSGSRD 36691
17-03-18 03:38:50.324 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:50.324 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:50.324 -07 000000611 INF: FPGA: Recv ZSGSRD 36698
17-03-18 03:38:50.334 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:50.334 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:50.334 -07 000000591 INF: FPGA: Recv ZSGSRD 36699
17-03-18 03:38:50.344 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:50.344 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:50.344 -07 000000501 INF: FPGA: Recv ZSGSRD 36701
17-03-18 03:38:50.354 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:50.354 -07 000000424 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:50.354 -07 000000461 INF: FPGA: Recv ZPIEZORD 32872
17-03-18 03:38:50.364 -07 000000424 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:50.364 -07 000000424 INF: Z Motor: Piezo is near 50.2 V (nominally 0 to 100 V), expect near 58.7 V, since DAC is at 5.869 V. Piezo Error = -8.5 V.
17-03-18 03:38:50.364 -07 000000424 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.1 um, Read 10 ADC samples: Avg = 36698 (-175.2 uncal um), Error = 0.9 uncal um, Median = 36698 (-175.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36691 (-175.1 uncal um), Max = 36702 (-175.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:38:50.364 -07 000000424 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36698, posNoise = 4, negNoise = 7
17-03-18 03:38:50.364 -07 000000424 INF: Z Motor: After move to -0.176063, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:50.364 -07 000000424 INF: Z Motor: Settle wait time = 2326 ms, measure time = 104 ms (allowed 150 ms), total time = 2430 ms
17-03-18 03:38:50.364 -07 000000424 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 03:38:50.414 -07 000000424 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2703 ms
17-03-18 03:38:50.414 -07 000000424 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:38:50.414 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:50.414 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:50.414 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:50.414 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:38:50.414 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:50.414 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:50.414 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:38:50.414 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:38:50.424 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:38:50.424 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:38:50.424 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 03:38:50.424 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-18 03:38:50.434 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:38:50.474 -07 000000444 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:38:50.774 -07 000000501 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:38:50.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:38:50.774 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:38:50.774 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) start.
17-03-18 03:38:50.814 -07 000000424 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:38:50.814 -07 000000626 INF: FPGA: Recv CAMSNAP
17-03-18 03:38:50.814 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 375 ms to get response, and 384 ms overall
17-03-18 03:38:50.884 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.989471,
17-03-18 03:38:50.904 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) end. Duration was 122 ms.
17-03-18 03:38:50.904 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:50.904 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:38:50.904 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 127 ms.
17-03-18 03:38:50.914 -07 000000585 INF: Autofocus start
17-03-18 03:38:50.914 -07 000000585 INF: MeasureProfile start
17-03-18 03:38:50.924 -07 000000585 INF: MeasureProfile done
17-03-18 03:38:50.924 -07 000000585 INF: X=64  Z correction [um]=0.2557664
17-03-18 03:38:50.924 -07 000000585 INF: Autofocus finished
17-03-18 03:38:50.934 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:38:50.934 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:38:50.944 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:38:50.944 -07 000000569 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:38:51.144 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:38:51.144 -07 000000569 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-18 03:38:51.144 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.176079089189479. ----------
17-03-18 03:38:51.154 -07 000000610 INF: Cycle	115	Tile	8	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:38:51.154 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37029, sync = True, waitForSettling = True)
17-03-18 03:38:51.154 -07 000000610 INF: Z Motor: Moving to -0.169508 mm, started at -0.176079 mm, distance = 6.57 um
17-03-18 03:38:51.154 -07 000000610 INF: FPGA: Xmit ZDACW 37029\n [Z Motor]
17-03-18 03:38:51.154 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:38:51.164 -07 000000610 INF: FPGA: 'ZDACW 37029' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:38:51.164 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:51.164 -07 000000569 INF: FPGA: Recv ZDACR 37029
17-03-18 03:38:51.174 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:51.174 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:38:51.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:51.324 -07 000000606 INF: FPGA: Recv ZSGSRD 35681
17-03-18 03:38:51.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:51.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:51.334 -07 000000501 INF: FPGA: Recv ZSGSRD 35673
17-03-18 03:38:51.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:51.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:51.344 -07 000000569 INF: FPGA: Recv ZSGSRD 35678
17-03-18 03:38:51.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:51.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:51.354 -07 000000501 INF: FPGA: Recv ZSGSRD 35679
17-03-18 03:38:51.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:51.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:51.364 -07 000000501 INF: FPGA: Recv ZSGSRD 35673
17-03-18 03:38:51.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:51.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:51.374 -07 000000569 INF: FPGA: Recv ZSGSRD 35674
17-03-18 03:38:51.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:51.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:51.384 -07 000000569 INF: FPGA: Recv ZSGSRD 35676
17-03-18 03:38:51.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:51.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:51.394 -07 000000501 INF: FPGA: Recv ZSGSRD 35681
17-03-18 03:38:51.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:51.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:51.404 -07 000000501 INF: FPGA: Recv ZSGSRD 35677
17-03-18 03:38:51.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:51.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:51.414 -07 000000501 INF: FPGA: Recv ZSGSRD 35676
17-03-18 03:38:51.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:51.424 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:51.424 -07 000000569 INF: FPGA: Recv ZPIEZORD 31458
17-03-18 03:38:51.434 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:51.434 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.650 V. Piezo Error = -9.3 V.
17-03-18 03:38:51.434 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.5 um, Read 10 ADC samples: Avg = 35677 (-168.6 uncal um), Error = 0.9 uncal um, Median = 35676 (-168.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35673 (-168.6 uncal um), Max = 35681 (-168.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:38:51.434 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35677, posNoise = 4, negNoise = 4
17-03-18 03:38:51.434 -07 000000610 INF: Z Motor: After move to -0.169508, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:51.434 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:38:51.434 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:51.434 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:51.434 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:51.434 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:51.434 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:38:51.434 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:51.434 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:38:51.434 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:38:51.434 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:38:51.434 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:38:51.434 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:38:51.434 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:38:51.444 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:38:51.444 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:38:51.444 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:38:51.444 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:38:51.454 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:38:51.454 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:38:51.454 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:38:51.454 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:38:51.454 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 37206 150\n [Camera]
17-03-18 03:38:51.594 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:38:51.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:51.654 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:38:52.064 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:38:52.064 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:38:52.064 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:52.064 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:52.064 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) start.
17-03-18 03:38:52.064 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:38:52.064 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:38:52.064 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:52.064 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:52.064 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) start.
17-03-18 03:38:52.254 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37206 793
17-03-18 03:38:52.404 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:38:52.464 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 03:38:52.464 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:38:52.464 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:52.464 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 03:38:52.464 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:38:52.464 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:52.464 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:38:52.464 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:38:52.464 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:38:52.474 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 03:38:52.604 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1141
17-03-18 03:38:52.604 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1141
17-03-18 03:38:52.604 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:52.724 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:52.724 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:38:52.724 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1141
17-03-18 03:38:52.724 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1141
17-03-18 03:38:52.724 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:52.724 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:52.724 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) start.
17-03-18 03:38:52.794 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:38:52.794 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:38:52.794 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 37206 150' command took 2 ms to send, 1333 ms to get response, and 1339 ms overall
17-03-18 03:38:52.794 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.169994
17-03-18 03:38:52.794 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.16999 mm
17-03-18 03:38:52.794 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:38:52.794 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:38:52.794 -07 000000569 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-18 03:38:52.794 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:52.794 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 37135, sync = True, waitForSettling = False)
17-03-18 03:38:52.794 -07 000000424 INF: Z Motor: Moving to -0.169993 mm, started at -0.169520 mm, distance = -0.47 um
17-03-18 03:38:52.804 -07 000000424 INF: FPGA: Xmit ZDACW 37135\n [Z Motor]
17-03-18 03:38:52.804 -07 000000585 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:38:52.804 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:38:52.804 -07 000000569 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:52.804 -07 000000569 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:38:52.804 -07 000000569 INF: Y Motor: Moving 1341 steps-18
17-03-18 03:38:52.804 -07 000000585 INF: FPGA: Recv ZDACW
17-03-18 03:38:52.814 -07 000000424 INF: FPGA: 'ZDACW 37135' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:38:52.814 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:38:52.824 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:52.824 -07 000000585 INF: FPGA: Recv ZDACR 37135
17-03-18 03:38:52.834 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:38:52.834 -07 000000424 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:38:53.124 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 403 ms.
17-03-18 03:38:53.124 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:38:53.124 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:53.124 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) end. Duration was 403 ms.
17-03-18 03:38:53.124 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 404 ms.
17-03-18 03:38:53.124 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:53.134 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:38:53.134 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:38:53.134 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 527 ms.
17-03-18 03:38:53.134 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-18 03:38:53.184 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 03:38:53.184 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 03:38:53.234 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:53.234 -07 000000444 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:38:53.244 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:38:53.244 -07 000000569 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:53.244 -07 000000569 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:38:53.244 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.838 mm, average velocity = 2.172 mm/sec
17-03-18 03:38:54.194 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:54.194 -07 000000424 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:38:54.204 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.204 -07 000000569 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:54.234 -07 000000569 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:38:54.234 -07 000000569 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:38:54.234 -07 000000569 INF: Y Motor: Moved to 66.5391 after 1435 ms (table move)
17-03-18 03:38:54.234 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169993 mm (DAC = 37135)
17-03-18 03:38:54.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.244 -07 000000569 INF: FPGA: Recv ZSGSRD 35744
17-03-18 03:38:54.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:38:54.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.244 -07 000000424 INF: FPGA: Recv ZSGSRD 35751
17-03-18 03:38:54.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.254 -07 000000569 INF: FPGA: Recv ZSGSRD 35752
17-03-18 03:38:54.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.264 -07 000000461 INF: FPGA: Recv ZSGSRD 35760
17-03-18 03:38:54.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.274 -07 000000569 INF: FPGA: Recv ZSGSRD 35756
17-03-18 03:38:54.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.284 -07 000000424 INF: FPGA: Recv ZSGSRD 35749
17-03-18 03:38:54.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.294 -07 000000611 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:38:54.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.304 -07 000000424 INF: FPGA: Recv ZSGSRD 35755
17-03-18 03:38:54.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.314 -07 000000461 INF: FPGA: Recv ZSGSRD 35754
17-03-18 03:38:54.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.324 -07 000000569 INF: FPGA: Recv ZSGSRD 35752
17-03-18 03:38:54.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.334 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:54.334 -07 000000611 INF: FPGA: Recv ZPIEZORD 31600
17-03-18 03:38:54.344 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.344 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.666 V. Piezo Error = -9.2 V.
17-03-18 03:38:54.344 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35752 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35752 (-169.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35744 (-169.1 uncal um), Max = 35760 (-169.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:38:54.344 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35752, posNoise = 8, negNoise = 8
17-03-18 03:38:54.344 -07 000000610 INF: Z Motor: After move to -0.169993, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:54.344 -07 000000610 INF: Z Motor: Settle wait time = 1439 ms, measure time = 103 ms (allowed 150 ms), total time = 1542 ms
17-03-18 03:38:54.344 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-18 03:38:54.394 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-18 03:38:54.394 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:38:54.394 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.170001784503373. ----------
17-03-18 03:38:54.394 -07 000000610 INF: Cycle	115	Tile	9	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:38:54.394 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36958, sync = True, waitForSettling = True)
17-03-18 03:38:54.394 -07 000000610 INF: Z Motor: Moving to -0.169183 mm, started at -0.170002 mm, distance = 0.82 um
17-03-18 03:38:54.394 -07 000000610 INF: FPGA: Xmit ZDACW 36958\n [Z Motor]
17-03-18 03:38:54.404 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:38:54.404 -07 000000610 INF: FPGA: 'ZDACW 36958' command took 0 ms to send, 1 ms to get response, and 5 ms overall
17-03-18 03:38:54.404 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:54.404 -07 000000444 INF: FPGA: Recv ZDACR 36958
17-03-18 03:38:54.414 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:38:54.414 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:38:54.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.564 -07 000000585 INF: FPGA: Recv ZSGSRD 35620
17-03-18 03:38:54.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.574 -07 000000444 INF: FPGA: Recv ZSGSRD 35634
17-03-18 03:38:54.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.584 -07 000000444 INF: FPGA: Recv ZSGSRD 35624
17-03-18 03:38:54.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.594 -07 000000611 INF: FPGA: Recv ZSGSRD 35629
17-03-18 03:38:54.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.604 -07 000000444 INF: FPGA: Recv ZSGSRD 35623
17-03-18 03:38:54.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.614 -07 000000585 INF: FPGA: Recv ZSGSRD 35623
17-03-18 03:38:54.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.624 -07 000000444 INF: FPGA: Recv ZSGSRD 35627
17-03-18 03:38:54.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.634 -07 000000585 INF: FPGA: Recv ZSGSRD 35625
17-03-18 03:38:54.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.644 -07 000000569 INF: FPGA: Recv ZSGSRD 35623
17-03-18 03:38:54.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:54.654 -07 000000585 INF: FPGA: Recv ZSGSRD 35631
17-03-18 03:38:54.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.664 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:54.664 -07 000000461 INF: FPGA: Recv ZPIEZORD 31442
17-03-18 03:38:54.674 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:54.674 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.639 V. Piezo Error = -9.2 V.
17-03-18 03:38:54.674 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.2 um, Read 10 ADC samples: Avg = 35626 (-168.3 uncal um), Error = 0.9 uncal um, Median = 35624 (-168.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35620 (-168.3 uncal um), Max = 35634 (-168.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:38:54.674 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35626, posNoise = 8, negNoise = 6
17-03-18 03:38:54.674 -07 000000610 INF: Z Motor: After move to -0.169183, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:54.674 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:38:54.674 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:54.674 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:54.674 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:54.674 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:54.674 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:38:54.674 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:54.674 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:38:54.674 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:38:54.674 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:38:54.674 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:38:54.674 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:38:54.674 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:38:54.684 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:38:54.684 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:38:54.684 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:38:54.684 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:38:54.694 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:38:54.694 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:38:54.694 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:38:54.694 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:38:54.694 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 37135 150\n [Camera]
17-03-18 03:38:54.894 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:38:55.304 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:38:55.304 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:38:55.304 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:55.304 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:55.304 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) start.
17-03-18 03:38:55.304 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:38:55.304 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:38:55.304 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:55.304 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:55.304 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) start.
17-03-18 03:38:55.494 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37135 793
17-03-18 03:38:55.644 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:38:55.704 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 03:38:55.704 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:38:55.704 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:55.704 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 03:38:55.704 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:38:55.704 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:55.714 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:55.714 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:38:55.714 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:55.714 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-18 03:38:55.844 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:38:55.844 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:38:55.844 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:55.844 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:55.844 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:38:55.844 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:38:55.844 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:38:55.844 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:55.964 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:55.964 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:38:56.034 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:38:56.034 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:38:56.034 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 37135 150' command took 2 ms to send, 1335 ms to get response, and 1341 ms overall
17-03-18 03:38:56.034 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.170027
17-03-18 03:38:56.034 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17003 mm
17-03-18 03:38:56.034 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:38:56.034 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:38:56.044 -07 000000611 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-18 03:38:56.044 -07 000000585 INF: Z Motor: Entering MoveAbsStepped (DAC = 37142, sync = True, waitForSettling = False)
17-03-18 03:38:56.044 -07 000000585 INF: Z Motor: Moving to -0.170025 mm, started at -0.169192 mm, distance = -0.83 um
17-03-18 03:38:56.044 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:56.044 -07 000000626 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:38:56.054 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:56.054 -07 000000585 INF: FPGA: Xmit ZDACW 37142\n [Z Motor]
17-03-18 03:38:56.054 -07 000000611 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:56.054 -07 000000611 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:38:56.054 -07 000000611 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:38:56.054 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:38:56.064 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:38:56.064 -07 000000585 INF: FPGA: 'ZDACW 37142' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:38:56.074 -07 000000585 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:56.074 -07 000000502 INF: FPGA: Recv ZDACR 37142
17-03-18 03:38:56.084 -07 000000585 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:38:56.084 -07 000000585 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-18 03:38:56.244 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 03:38:56.244 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:38:56.244 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:56.244 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:38:56.244 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:38:56.284 -07 000000585 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.014009,
17-03-18 03:38:56.354 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 390 ms.
17-03-18 03:38:56.354 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:38:56.354 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:56.364 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:38:56.364 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 521 ms.
17-03-18 03:38:56.434 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-18 03:38:56.434 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:38:56.484 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:56.484 -07 000000424 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:38:56.494 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:38:56.494 -07 000000611 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:56.494 -07 000000611 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-18 03:38:56.494 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.844 mm, average velocity = 2.180 mm/sec
17-03-18 03:38:56.594 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:38:56.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:38:57.444 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:57.444 -07 000000626 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:38:57.454 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:57.454 -07 000000611 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:57.474 -07 000000611 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:38:57.474 -07 000000611 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:38:57.474 -07 000000611 INF: Y Motor: Moved to 67.3721 after 1438 ms (table move)
17-03-18 03:38:57.484 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170025 mm (DAC = 37142)
17-03-18 03:38:57.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.484 -07 000000606 INF: FPGA: Recv ZSGSRD 35763
17-03-18 03:38:57.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:38:57.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.494 -07 000000606 INF: FPGA: Recv ZSGSRD 35760
17-03-18 03:38:57.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.504 -07 000000585 INF: FPGA: Recv ZSGSRD 35759
17-03-18 03:38:57.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.514 -07 000000606 INF: FPGA: Recv ZSGSRD 35762
17-03-18 03:38:57.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.524 -07 000000569 INF: FPGA: Recv ZSGSRD 35757
17-03-18 03:38:57.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.534 -07 000000606 INF: FPGA: Recv ZSGSRD 35754
17-03-18 03:38:57.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.544 -07 000000569 INF: FPGA: Recv ZSGSRD 35759
17-03-18 03:38:57.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.554 -07 000000569 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:38:57.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.564 -07 000000606 INF: FPGA: Recv ZSGSRD 35758
17-03-18 03:38:57.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.574 -07 000000606 INF: FPGA: Recv ZSGSRD 35762
17-03-18 03:38:57.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.584 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:57.584 -07 000000461 INF: FPGA: Recv ZPIEZORD 31570
17-03-18 03:38:57.594 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.594 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.668 V. Piezo Error = -9.2 V.
17-03-18 03:38:57.594 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35758 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35759 (-169.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 35745 (-169.1 uncal um), Max = 35763 (-169.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 13 (0.1 uncal um)
17-03-18 03:38:57.594 -07 000000610 INF: Z Motor: ADC noise = 13, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35758, posNoise = 5, negNoise = 13
17-03-18 03:38:57.594 -07 000000610 INF: Z Motor: After move to -0.170025, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:57.594 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 108 ms (allowed 150 ms), total time = 1550 ms
17-03-18 03:38:57.594 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:38:57.644 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms
17-03-18 03:38:57.644 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:38:57.644 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.170040329776223. ----------
17-03-18 03:38:57.644 -07 000000610 INF: Cycle	115	Tile	10	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:38:57.644 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36966, sync = True, waitForSettling = True)
17-03-18 03:38:57.644 -07 000000610 INF: Z Motor: Moving to -0.169220 mm, started at -0.170040 mm, distance = 0.82 um
17-03-18 03:38:57.644 -07 000000610 INF: FPGA: Xmit ZDACW 36966\n [Z Motor]
17-03-18 03:38:57.644 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:38:57.654 -07 000000610 INF: FPGA: 'ZDACW 36966' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:38:57.654 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:57.654 -07 000000626 INF: FPGA: Recv ZDACR 36966
17-03-18 03:38:57.664 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.664 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:38:57.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.814 -07 000000626 INF: FPGA: Recv ZSGSRD 35631
17-03-18 03:38:57.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:38:57.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.824 -07 000000585 INF: FPGA: Recv ZSGSRD 35636
17-03-18 03:38:57.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.834 -07 000000461 INF: FPGA: Recv ZSGSRD 35629
17-03-18 03:38:57.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.844 -07 000000585 INF: FPGA: Recv ZSGSRD 35633
17-03-18 03:38:57.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.854 -07 000000501 INF: FPGA: Recv ZSGSRD 35634
17-03-18 03:38:57.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.864 -07 000000430 INF: FPGA: Recv ZSGSRD 35629
17-03-18 03:38:57.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.874 -07 000000585 INF: FPGA: Recv ZSGSRD 35632
17-03-18 03:38:57.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.884 -07 000000430 INF: FPGA: Recv ZSGSRD 35630
17-03-18 03:38:57.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.894 -07 000000585 INF: FPGA: Recv ZSGSRD 35633
17-03-18 03:38:57.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:38:57.904 -07 000000501 INF: FPGA: Recv ZSGSRD 35637
17-03-18 03:38:57.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.914 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:38:57.914 -07 000000585 INF: FPGA: Recv ZPIEZORD 31392
17-03-18 03:38:57.924 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:38:57.924 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.641 V. Piezo Error = -9.3 V.
17-03-18 03:38:57.924 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.2 um, Read 10 ADC samples: Avg = 35632 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35632 (-168.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35629 (-168.3 uncal um), Max = 35637 (-168.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:38:57.924 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35632, posNoise = 5, negNoise = 3
17-03-18 03:38:57.924 -07 000000610 INF: Z Motor: After move to -0.169220, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:38:57.924 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:38:57.924 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:38:57.924 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:38:57.924 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:38:57.924 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:38:57.924 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:38:57.924 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:38:57.924 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:38:57.924 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:38:57.924 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:38:57.924 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:38:57.924 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:38:57.924 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:38:57.924 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:38:57.934 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:38:57.934 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:38:57.934 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:38:57.944 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:38:57.944 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:38:57.944 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:38:57.944 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:38:57.944 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 37142 150\n [Camera]
17-03-18 03:38:58.144 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:38:58.554 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:38:58.554 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:38:58.554 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:58.554 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:58.554 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) start.
17-03-18 03:38:58.564 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:38:58.564 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:38:58.564 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:58.564 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:58.564 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) start.
17-03-18 03:38:58.754 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37142 793
17-03-18 03:38:58.904 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:38:58.944 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:38:58.944 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:38:58.944 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:58.944 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) end. Duration was 389 ms.
17-03-18 03:38:58.944 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:38:58.944 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:58.954 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:58.954 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:58.954 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:38:58.954 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:38:59.094 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:38:59.094 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:38:59.094 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:38:59.094 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:38:59.094 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) start.
17-03-18 03:38:59.104 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:38:59.104 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:38:59.104 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:38:59.104 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:38:59.104 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:38:59.284 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:38:59.284 -07 000000585 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:38:59.284 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 37142 150' command took 2 ms to send, 1328 ms to get response, and 1339 ms overall
17-03-18 03:38:59.294 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.169519
17-03-18 03:38:59.294 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16952 mm
17-03-18 03:38:59.294 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:38:59.294 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 37031, sync = True, waitForSettling = False)
17-03-18 03:38:59.294 -07 000000501 INF: Z Motor: Moving to -0.169517 mm, started at -0.169231 mm, distance = -0.29 um
17-03-18 03:38:59.294 -07 000000501 INF: FPGA: Xmit ZDACW 37031\n [Z Motor]
17-03-18 03:38:59.294 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:38:59.294 -07 000000626 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-18 03:38:59.294 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:38:59.304 -07 000000501 INF: FPGA: 'ZDACW 37031' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:38:59.304 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:59.304 -07 000000585 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:38:59.314 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:38:59.314 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:38:59.314 -07 000000626 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:59.314 -07 000000626 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:38:59.314 -07 000000626 INF: Y Motor: Moving 1345 steps-22
17-03-18 03:38:59.314 -07 000000461 INF: FPGA: Recv ZDACR 37031
17-03-18 03:38:59.324 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:38:59.324 -07 000000501 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:38:59.324 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:38:59.474 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:38:59.474 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:38:59.474 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:59.484 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:38:59.484 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:38:59.484 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:38:59.484 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:38:59.484 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:38:59.484 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:38:59.494 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:38:59.694 -07 000000611 INF: FPGA: Recv YMVTILE
17-03-18 03:38:59.694 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:38:59.744 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:38:59.754 -07 000000461 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:38:59.754 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 4 ms to get response, and 6 ms overall
17-03-18 03:38:59.754 -07 000000626 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:38:59.754 -07 000000626 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:38:59.754 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.841 mm, average velocity = 2.155 mm/sec
17-03-18 03:39:00.704 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:00.704 -07 000000461 INF: FPGA: Recv YRDPOS 139685
17-03-18 03:39:00.714 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:00.714 -07 000000626 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:00.744 -07 000000626 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:00.744 -07 000000626 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:39:00.744 -07 000000626 INF: Y Motor: Moved to 68.2056 after 1451 ms (table move)
17-03-18 03:39:00.744 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169517 mm (DAC = 37031)
17-03-18 03:39:00.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:00.754 -07 000000461 INF: FPGA: Recv ZSGSRD 35669
17-03-18 03:39:00.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 4 ms to get response, and 5 ms overall
17-03-18 03:39:00.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:00.754 -07 000000626 INF: FPGA: Recv ZSGSRD 35677
17-03-18 03:39:00.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:39:00.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:00.764 -07 000000461 INF: FPGA: Recv ZSGSRD 35674
17-03-18 03:39:00.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:00.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:00.774 -07 000000430 INF: FPGA: Recv ZSGSRD 35677
17-03-18 03:39:00.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:00.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:00.784 -07 000000461 INF: FPGA: Recv ZSGSRD 35671
17-03-18 03:39:00.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:00.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:00.794 -07 000000430 INF: FPGA: Recv ZSGSRD 35675
17-03-18 03:39:00.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:00.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:00.804 -07 000000461 INF: FPGA: Recv ZSGSRD 35671
17-03-18 03:39:00.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:00.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:00.814 -07 000000626 INF: FPGA: Recv ZSGSRD 35680
17-03-18 03:39:00.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:00.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:00.824 -07 000000461 INF: FPGA: Recv ZSGSRD 35681
17-03-18 03:39:00.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:00.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:00.834 -07 000000611 INF: FPGA: Recv ZSGSRD 35679
17-03-18 03:39:00.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:00.844 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:00.844 -07 000000501 INF: FPGA: Recv ZPIEZORD 31508
17-03-18 03:39:00.854 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:39:00.854 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.651 V. Piezo Error = -9.2 V.
17-03-18 03:39:00.854 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.5 um, Read 10 ADC samples: Avg = 35675 (-168.6 uncal um), Error = 0.9 uncal um, Median = 35676 (-168.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35669 (-168.6 uncal um), Max = 35681 (-168.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:39:00.854 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35675, posNoise = 6, negNoise = 6
17-03-18 03:39:00.854 -07 000000610 INF: Z Motor: After move to -0.169517, error = 0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:00.854 -07 000000610 INF: Z Motor: Settle wait time = 1455 ms, measure time = 101 ms (allowed 150 ms), total time = 1556 ms
17-03-18 03:39:00.854 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:00.904 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms
17-03-18 03:39:00.904 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:00.904 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.169507120168457. ----------
17-03-18 03:39:00.904 -07 000000610 INF: Cycle	115	Tile	11	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:00.904 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36855, sync = True, waitForSettling = True)
17-03-18 03:39:00.904 -07 000000610 INF: Z Motor: Moving to -0.168711 mm, started at -0.169507 mm, distance = 0.80 um
17-03-18 03:39:00.904 -07 000000610 INF: FPGA: Xmit ZDACW 36855\n [Z Motor]
17-03-18 03:39:00.904 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:39:00.914 -07 000000610 INF: FPGA: 'ZDACW 36855' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:00.914 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:00.914 -07 000000585 INF: FPGA: Recv ZDACR 36855
17-03-18 03:39:00.924 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:00.924 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:01.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:01.074 -07 000000501 INF: FPGA: Recv ZSGSRD 35558
17-03-18 03:39:01.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:01.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:01.084 -07 000000430 INF: FPGA: Recv ZSGSRD 35553
17-03-18 03:39:01.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:01.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:01.094 -07 000000611 INF: FPGA: Recv ZSGSRD 35552
17-03-18 03:39:01.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:01.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:01.104 -07 000000606 INF: FPGA: Recv ZSGSRD 35552
17-03-18 03:39:01.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:01.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:01.114 -07 000000611 INF: FPGA: Recv ZSGSRD 35550
17-03-18 03:39:01.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:01.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:01.124 -07 000000606 INF: FPGA: Recv ZSGSRD 35551
17-03-18 03:39:01.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:01.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:01.134 -07 000000430 INF: FPGA: Recv ZSGSRD 35550
17-03-18 03:39:01.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:01.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:01.144 -07 000000461 INF: FPGA: Recv ZSGSRD 35554
17-03-18 03:39:01.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:01.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:01.154 -07 000000430 INF: FPGA: Recv ZSGSRD 35554
17-03-18 03:39:01.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:01.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:01.164 -07 000000606 INF: FPGA: Recv ZSGSRD 35550
17-03-18 03:39:01.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:01.174 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:01.174 -07 000000585 INF: FPGA: Recv ZPIEZORD 31309
17-03-18 03:39:01.184 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:01.184 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.624 V. Piezo Error = -9.4 V.
17-03-18 03:39:01.184 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.7 um, Read 10 ADC samples: Avg = 35552 (-167.8 uncal um), Error = 0.9 uncal um, Median = 35552 (-167.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35550 (-167.8 uncal um), Max = 35558 (-167.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-18 03:39:01.184 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35552, posNoise = 6, negNoise = 2
17-03-18 03:39:01.184 -07 000000610 INF: Z Motor: After move to -0.168711, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:01.184 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:39:01.184 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:01.184 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:01.184 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:01.184 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:01.184 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:01.184 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:01.184 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:01.184 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:01.184 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:01.184 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:01.184 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:01.184 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:01.194 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:39:01.194 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:01.194 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:39:01.194 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:01.204 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:39:01.204 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:39:01.204 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:39:01.204 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:39:01.204 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 37031 150\n [Camera]
17-03-18 03:39:01.404 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:01.594 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:01.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:01.644 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.012614,
17-03-18 03:39:01.814 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:01.814 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:01.814 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:01.814 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:01.814 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:39:01.824 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:01.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:01.824 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:01.824 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:01.824 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:39:02.014 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37031 793
17-03-18 03:39:02.154 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:02.214 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 03:39:02.214 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:39:02.214 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:02.224 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 03:39:02.224 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:39:02.224 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:02.224 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:02.224 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:39:02.224 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:02.234 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-18 03:39:02.354 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1140
17-03-18 03:39:02.354 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1140
17-03-18 03:39:02.354 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:02.354 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:02.354 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:39:02.364 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1140
17-03-18 03:39:02.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1140
17-03-18 03:39:02.364 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:02.364 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:02.364 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 03:39:02.544 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:39:02.544 -07 000000611 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:02.544 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 37031 150' command took 2 ms to send, 1328 ms to get response, and 1338 ms overall
17-03-18 03:39:02.554 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:39:02.554 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.20556640625, Z-Position -0.168716942075021. ------
17-03-18 03:39:02.554 -07 000000611 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:39:02.554 -07 000000606 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.17537 mm
17-03-18 03:39:02.554 -07 000000606 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:02.554 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:39:02.554 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:39:02.554 -07 000000430 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm
17-03-18 03:39:02.564 -07 000000611 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:02.564 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:02.564 -07 000000585 INF: Z Motor: Entering MoveAbsStepped (DAC = 38309, sync = True, waitForSettling = False)
17-03-18 03:39:02.564 -07 000000585 INF: Z Motor: Moving to -0.175367 mm, started at -0.168717 mm, distance = -6.65 um
17-03-18 03:39:02.564 -07 000000591 INF: FPGA: Recv YRDPOS 139685
17-03-18 03:39:02.574 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:02.574 -07 000000430 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:02.574 -07 000000430 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:02.574 -07 000000430 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:39:02.574 -07 000000611 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:39:02.584 -07 000000585 INF: FPGA: Xmit ZDACW 38309\n [Z Motor]
17-03-18 03:39:02.584 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:39:02.594 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:02.594 -07 000000585 INF: FPGA: 'ZDACW 38309' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:39:02.604 -07 000000585 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:02.604 -07 000000502 INF: FPGA: Recv ZDACR 38309
17-03-18 03:39:02.614 -07 000000585 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:39:02.614 -07 000000585 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-18 03:39:02.744 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:39:02.744 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:39:02.744 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:02.744 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:39:02.744 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:39:02.744 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:02.754 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:39:02.754 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:39:02.754 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:39:02.764 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:39:02.774 -07 000000585 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:39:02.774 -07 000000611 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 213 ms overall
17-03-18 03:39:02.964 -07 000000611 INF: FPGA: Recv YMVTILE
17-03-18 03:39:02.964 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:39:03.014 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:03.024 -07 000000626 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:39:03.024 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:03.024 -07 000000430 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:03.024 -07 000000430 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:39:03.024 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.837 mm, average velocity = 2.103 mm/sec
17-03-18 03:39:03.974 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:03.974 -07 000000626 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:39:03.984 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:03.984 -07 000000430 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:04.014 -07 000000430 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:04.014 -07 000000430 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:39:04.014 -07 000000430 INF: Y Motor: Moved to 69.0273 after 1451 ms (table move)
17-03-18 03:39:04.014 -07 000000606 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175367 mm (DAC = 38309)
17-03-18 03:39:04.014 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:04.014 -07 000000611 INF: FPGA: Recv ZSGSRD 36584
17-03-18 03:39:04.024 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:04.024 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:04.024 -07 000000585 INF: FPGA: Recv ZSGSRD 36592
17-03-18 03:39:04.034 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:04.034 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:04.034 -07 000000626 INF: FPGA: Recv ZSGSRD 36598
17-03-18 03:39:04.044 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:04.044 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:04.044 -07 000000502 INF: FPGA: Recv ZSGSRD 36589
17-03-18 03:39:04.054 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:04.054 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:04.054 -07 000000626 INF: FPGA: Recv ZSGSRD 36577
17-03-18 03:39:04.064 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:04.064 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:04.064 -07 000000461 INF: FPGA: Recv ZSGSRD 36586
17-03-18 03:39:04.074 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:04.074 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:04.074 -07 000000502 INF: FPGA: Recv ZSGSRD 36582
17-03-18 03:39:04.084 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:04.084 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:04.084 -07 000000461 INF: FPGA: Recv ZSGSRD 36587
17-03-18 03:39:04.094 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:04.094 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:04.094 -07 000000626 INF: FPGA: Recv ZSGSRD 36586
17-03-18 03:39:04.104 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:04.104 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:04.104 -07 000000585 INF: FPGA: Recv ZSGSRD 36583
17-03-18 03:39:04.114 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:04.114 -07 000000606 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:04.114 -07 000000611 INF: FPGA: Recv ZPIEZORD 32731
17-03-18 03:39:04.124 -07 000000606 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:04.124 -07 000000606 INF: Z Motor: Piezo is near 49.9 V (nominally 0 to 100 V), expect near 58.5 V, since DAC is at 5.846 V. Piezo Error = -8.5 V.
17-03-18 03:39:04.124 -07 000000606 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.4 um, Read 10 ADC samples: Avg = 36586 (-174.5 uncal um), Error = 0.9 uncal um, Median = 36586 (-174.5 uncal um), StdDev = 6 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 36577 (-174.4 uncal um), Max = 36598 (-174.5 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:39:04.124 -07 000000606 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36586, posNoise = 12, negNoise = 9
17-03-18 03:39:04.124 -07 000000606 INF: Z Motor: After move to -0.175367, error = 0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:04.124 -07 000000606 INF: Z Motor: Settle wait time = 1454 ms, measure time = 105 ms (allowed 150 ms), total time = 1559 ms
17-03-18 03:39:04.124 -07 000000606 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:04.174 -07 000000606 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1613 ms
17-03-18 03:39:04.174 -07 000000606 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:04.174 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:04.174 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:04.174 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:04.174 -07 000000585 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:04.174 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:39:04.174 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:04.184 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:04.184 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:39:04.184 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:39:04.184 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:39:04.184 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 03:39:04.184 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-18 03:39:04.194 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:39:04.234 -07 000000585 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:39:04.534 -07 000000611 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:39:04.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:39:04.534 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:39:04.664 -07 000000606 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:39:04.664 -07 000000606 INF: FPGA: Recv CAMSNAP
17-03-18 03:39:04.664 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 460 ms to get response, and 469 ms overall
17-03-18 03:39:04.664 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) start.
17-03-18 03:39:04.784 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:39:04.784 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:04.784 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:39:04.784 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 251 ms.
17-03-18 03:39:04.864 -07 000000461 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:39:04.864 -07 000000626 INF: Autofocus start
17-03-18 03:39:04.864 -07 000000626 INF: MeasureProfile start
17-03-18 03:39:04.864 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:39:04.874 -07 000000461 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:39:04.874 -07 000000461 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:39:04.874 -07 000000626 INF: MeasureProfile done
17-03-18 03:39:04.874 -07 000000626 INF: X=0  Z correction [um]=-0.0713522
17-03-18 03:39:04.874 -07 000000626 INF: Autofocus finished
17-03-18 03:39:05.074 -07 000000430 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:39:05.074 -07 000000461 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:39:05.074 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.175359577429601. ----------
17-03-18 03:39:05.084 -07 000000610 INF: Cycle	115	Tile	12	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:05.084 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36806, sync = True, waitForSettling = True)
17-03-18 03:39:05.084 -07 000000610 INF: Z Motor: Moving to -0.168487 mm, started at -0.175360 mm, distance = 6.87 um
17-03-18 03:39:05.084 -07 000000610 INF: FPGA: Xmit ZDACW 36806\n [Z Motor]
17-03-18 03:39:05.084 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:39:05.094 -07 000000610 INF: FPGA: 'ZDACW 36806' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:39:05.094 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:05.094 -07 000000585 INF: FPGA: Recv ZDACR 36806
17-03-18 03:39:05.104 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:05.104 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:05.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:05.254 -07 000000430 INF: FPGA: Recv ZSGSRD 35519
17-03-18 03:39:05.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:05.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:05.264 -07 000000502 INF: FPGA: Recv ZSGSRD 35520
17-03-18 03:39:05.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:05.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:05.274 -07 000000461 INF: FPGA: Recv ZSGSRD 35517
17-03-18 03:39:05.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:05.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:05.284 -07 000000430 INF: FPGA: Recv ZSGSRD 35515
17-03-18 03:39:05.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:05.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:05.294 -07 000000606 INF: FPGA: Recv ZSGSRD 35524
17-03-18 03:39:05.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:05.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:05.304 -07 000000430 INF: FPGA: Recv ZSGSRD 35516
17-03-18 03:39:05.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:05.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:05.314 -07 000000606 INF: FPGA: Recv ZSGSRD 35519
17-03-18 03:39:05.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:05.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:05.324 -07 000000430 INF: FPGA: Recv ZSGSRD 35517
17-03-18 03:39:05.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:05.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:05.334 -07 000000611 INF: FPGA: Recv ZSGSRD 35520
17-03-18 03:39:05.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:05.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:05.344 -07 000000626 INF: FPGA: Recv ZSGSRD 35519
17-03-18 03:39:05.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:05.354 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:05.354 -07 000000502 INF: FPGA: Recv ZPIEZORD 31252
17-03-18 03:39:05.364 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:05.364 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.616 V. Piezo Error = -9.4 V.
17-03-18 03:39:05.364 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.5 um, Read 10 ADC samples: Avg = 35519 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35519 (-167.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35515 (-167.6 uncal um), Max = 35524 (-167.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:39:05.364 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35519, posNoise = 5, negNoise = 4
17-03-18 03:39:05.364 -07 000000610 INF: Z Motor: After move to -0.168487, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:05.364 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:39:05.364 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:05.364 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:05.364 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:05.364 -07 000000585 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:05.364 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:05.364 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:05.364 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:05.364 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:05.364 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:05.364 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:05.364 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:05.364 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:05.374 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:39:05.374 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:05.374 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:39:05.374 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:05.384 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:39:05.384 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:39:05.384 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:39:05.384 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:39:05.384 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 36983 150\n [Camera]
17-03-18 03:39:05.584 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:05.994 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:05.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:05.994 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:05.994 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:05.994 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:05.994 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:05.994 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) start.
17-03-18 03:39:05.994 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:05.994 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:05.994 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) start.
17-03-18 03:39:06.184 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36983 793
17-03-18 03:39:06.334 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:06.374 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:39:06.374 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:39:06.374 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:39:06.374 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:06.374 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:39:06.374 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:06.384 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:39:06.384 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:39:06.384 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:39:06.394 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:39:06.524 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:06.524 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:06.534 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:06.534 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:06.534 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) start.
17-03-18 03:39:06.534 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:06.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:06.534 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:06.534 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:06.534 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:39:06.594 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:06.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:06.724 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:39:06.724 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:06.724 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 36983 150' command took 2 ms to send, 1331 ms to get response, and 1338 ms overall
17-03-18 03:39:06.724 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.168825
17-03-18 03:39:06.724 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16882 mm
17-03-18 03:39:06.724 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:06.854 -07 000000585 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:39:06.854 -07 000000585 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-18 03:39:06.854 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 36880, sync = True, waitForSettling = False)
17-03-18 03:39:06.854 -07 000000502 INF: Z Motor: Moving to -0.168826 mm, started at -0.168505 mm, distance = -0.32 um
17-03-18 03:39:06.854 -07 000000585 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:06.854 -07 000000461 INF: FPGA: Recv YRDPOS 141369
17-03-18 03:39:06.864 -07 000000585 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:39:06.864 -07 000000585 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:06.864 -07 000000502 INF: FPGA: Xmit ZDACW 36880\n [Z Motor]
17-03-18 03:39:06.864 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:39:06.864 -07 000000585 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:06.864 -07 000000585 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:39:06.874 -07 000000502 INF: FPGA: 'ZDACW 36880' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:39:06.874 -07 000000585 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:06.884 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:06.884 -07 000000430 INF: FPGA: Recv ZDACR 36880
17-03-18 03:39:06.894 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:39:06.894 -07 000000502 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:39:06.914 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:39:06.914 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:39:06.914 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:06.914 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:39:06.914 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:39:06.914 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:06.914 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:06.914 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:06.914 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:39:06.924 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:39:07.014 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.045313,
17-03-18 03:39:07.244 -07 000000611 INF: FPGA: Recv YMVTILE
17-03-18 03:39:07.244 -07 000000585 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-18 03:39:07.294 -07 000000585 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:07.294 -07 000000444 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:39:07.304 -07 000000585 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:07.304 -07 000000585 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:07.304 -07 000000585 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:39:07.304 -07 000000585 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.845 mm, average velocity = 2.201 mm/sec
17-03-18 03:39:08.254 -07 000000585 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:08.254 -07 000000569 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:39:08.264 -07 000000585 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:08.264 -07 000000585 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:08.294 -07 000000585 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:08.294 -07 000000585 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:39:08.294 -07 000000585 INF: Y Motor: Moved to 69.8633 after 1437 ms (table move)
17-03-18 03:39:08.294 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168826 mm (DAC = 36880)
17-03-18 03:39:08.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.294 -07 000000585 INF: FPGA: Recv ZSGSRD 35569
17-03-18 03:39:08.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:39:08.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.304 -07 000000585 INF: FPGA: Recv ZSGSRD 35557
17-03-18 03:39:08.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.314 -07 000000606 INF: FPGA: Recv ZSGSRD 35577
17-03-18 03:39:08.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.324 -07 000000606 INF: FPGA: Recv ZSGSRD 35580
17-03-18 03:39:08.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 5 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.334 -07 000000611 INF: FPGA: Recv ZSGSRD 35574
17-03-18 03:39:08.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.344 -07 000000611 INF: FPGA: Recv ZSGSRD 35569
17-03-18 03:39:08.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.354 -07 000000611 INF: FPGA: Recv ZSGSRD 35569
17-03-18 03:39:08.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.364 -07 000000611 INF: FPGA: Recv ZSGSRD 35571
17-03-18 03:39:08.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.374 -07 000000461 INF: FPGA: Recv ZSGSRD 35572
17-03-18 03:39:08.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.384 -07 000000585 INF: FPGA: Recv ZSGSRD 35571
17-03-18 03:39:08.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.394 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:08.394 -07 000000585 INF: FPGA: Recv ZPIEZORD 31360
17-03-18 03:39:08.404 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.404 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.628 V. Piezo Error = -9.3 V.
17-03-18 03:39:08.404 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.8 um, Read 10 ADC samples: Avg = 35571 (-168.0 uncal um), Error = 0.9 uncal um, Median = 35571 (-168.0 uncal um), StdDev = 6 (0.0 uncal um), Range = 23 (0.1 uncal um), Min = 35557 (-167.9 uncal um), Max = 35580 (-168.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 14 (0.1 uncal um)
17-03-18 03:39:08.404 -07 000000610 INF: Z Motor: ADC noise = 14, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35571, posNoise = 9, negNoise = 14
17-03-18 03:39:08.404 -07 000000610 INF: Z Motor: After move to -0.168826, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:08.404 -07 000000610 INF: Z Motor: Settle wait time = 1439 ms, measure time = 108 ms (allowed 150 ms), total time = 1547 ms
17-03-18 03:39:08.404 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:08.454 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1726 ms
17-03-18 03:39:08.454 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:08.454 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.168839002105714. ----------
17-03-18 03:39:08.454 -07 000000610 INF: Cycle	115	Tile	13	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:08.454 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36703, sync = True, waitForSettling = True)
17-03-18 03:39:08.454 -07 000000610 INF: Z Motor: Moving to -0.168016 mm, started at -0.168839 mm, distance = 0.82 um
17-03-18 03:39:08.454 -07 000000610 INF: FPGA: Xmit ZDACW 36703\n [Z Motor]
17-03-18 03:39:08.454 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:39:08.464 -07 000000610 INF: FPGA: 'ZDACW 36703' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:08.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:08.464 -07 000000626 INF: FPGA: Recv ZDACR 36703
17-03-18 03:39:08.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:08.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.624 -07 000000591 INF: FPGA: Recv ZSGSRD 35447
17-03-18 03:39:08.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:08.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.634 -07 000000591 INF: FPGA: Recv ZSGSRD 35448
17-03-18 03:39:08.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.644 -07 000000444 INF: FPGA: Recv ZSGSRD 35446
17-03-18 03:39:08.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.654 -07 000000461 INF: FPGA: Recv ZSGSRD 35436
17-03-18 03:39:08.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.664 -07 000000591 INF: FPGA: Recv ZSGSRD 35444
17-03-18 03:39:08.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.674 -07 000000461 INF: FPGA: Recv ZSGSRD 35443
17-03-18 03:39:08.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.684 -07 000000611 INF: FPGA: Recv ZSGSRD 35451
17-03-18 03:39:08.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:39:08.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.694 -07 000000626 INF: FPGA: Recv ZSGSRD 35445
17-03-18 03:39:08.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.704 -07 000000444 INF: FPGA: Recv ZSGSRD 35443
17-03-18 03:39:08.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:08.714 -07 000000502 INF: FPGA: Recv ZSGSRD 35445
17-03-18 03:39:08.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:08.724 -07 000000626 INF: FPGA: Recv ZPIEZORD 31173
17-03-18 03:39:08.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:08.734 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.601 V. Piezo Error = -9.4 V.
17-03-18 03:39:08.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.0 um, Read 10 ADC samples: Avg = 35445 (-167.2 uncal um), Error = 0.9 uncal um, Median = 35445 (-167.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35436 (-167.1 uncal um), Max = 35451 (-167.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:39:08.734 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35445, posNoise = 6, negNoise = 9
17-03-18 03:39:08.734 -07 000000610 INF: Z Motor: After move to -0.168016, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:08.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:39:08.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:08.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:08.734 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:08.734 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:08.734 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:08.734 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:08.734 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:08.734 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:08.734 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:08.734 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:08.734 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:08.734 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:08.734 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:39:08.734 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:08.734 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:39:08.734 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:08.744 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:39:08.744 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-18 03:39:08.754 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:39:08.754 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:39:08.754 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 36880 150\n [Camera]
17-03-18 03:39:08.954 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:09.364 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:09.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:09.364 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:09.364 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:09.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:09.364 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:09.374 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:09.374 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) start.
17-03-18 03:39:09.374 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:09.374 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) start.
17-03-18 03:39:09.554 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36880 796
17-03-18 03:39:09.704 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning grn on 945
17-03-18 03:39:09.744 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:39:09.744 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:39:09.744 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:09.744 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:39:09.744 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:39:09.744 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:09.754 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:09.754 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:39:09.754 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:09.764 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:39:09.904 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:09.904 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:09.904 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:09.904 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:09.904 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:39:09.904 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:09.904 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:09.904 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:09.904 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:09.904 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:39:10.094 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:39:10.094 -07 000000611 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:10.094 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 36880 150' command took 2 ms to send, 1333 ms to get response, and 1338 ms overall
17-03-18 03:39:10.094 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.167959
17-03-18 03:39:10.094 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16796 mm
17-03-18 03:39:10.094 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:10.104 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:39:10.104 -07 000000626 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-18 03:39:10.104 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:10.104 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 36691, sync = True, waitForSettling = False)
17-03-18 03:39:10.104 -07 000000502 INF: Z Motor: Moving to -0.167961 mm, started at -0.168030 mm, distance = 0.07 um
17-03-18 03:39:10.104 -07 000000430 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:39:10.114 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:39:10.114 -07 000000626 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:10.114 -07 000000626 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:10.114 -07 000000626 INF: Y Motor: Moving 1343 steps-19
17-03-18 03:39:10.114 -07 000000502 INF: FPGA: Xmit ZDACW 36691\n [Z Motor]
17-03-18 03:39:10.114 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 03:39:10.124 -07 000000502 INF: FPGA: 'ZDACW 36691' command took 1 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:39:10.124 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:10.124 -07 000000611 INF: FPGA: Recv ZDACR 36691
17-03-18 03:39:10.134 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:10.134 -07 000000502 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:39:10.134 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:10.284 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:39:10.284 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:39:10.284 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:10.284 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:10.284 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:39:10.284 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:39:10.284 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:39:10.284 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:10.294 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:10.304 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:39:10.504 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:39:10.504 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 1 ms to send, 369 ms to get response, and 398 ms overall
17-03-18 03:39:10.554 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:10.564 -07 000000430 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:39:10.564 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:39:10.564 -07 000000626 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:10.564 -07 000000626 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:39:10.564 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.839 mm, average velocity = 2.109 mm/sec
17-03-18 03:39:11.514 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:11.514 -07 000000461 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:39:11.524 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:11.524 -07 000000626 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:11.544 -07 000000626 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:11.544 -07 000000626 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:39:11.544 -07 000000626 INF: Y Motor: Moved to 70.6885 after 1446 ms (table move)
17-03-18 03:39:11.554 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167961 mm (DAC = 36691)
17-03-18 03:39:11.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.554 -07 000000461 INF: FPGA: Recv ZSGSRD 35440
17-03-18 03:39:11.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:39:11.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.564 -07 000000591 INF: FPGA: Recv ZSGSRD 35439
17-03-18 03:39:11.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.574 -07 000000461 INF: FPGA: Recv ZSGSRD 35434
17-03-18 03:39:11.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.584 -07 000000444 INF: FPGA: Recv ZSGSRD 35436
17-03-18 03:39:11.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.594 -07 000000430 INF: FPGA: Recv ZSGSRD 35441
17-03-18 03:39:11.594 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:11.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:11.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.604 -07 000000430 INF: FPGA: Recv ZSGSRD 35437
17-03-18 03:39:11.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.614 -07 000000626 INF: FPGA: Recv ZSGSRD 35435
17-03-18 03:39:11.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.624 -07 000000461 INF: FPGA: Recv ZSGSRD 35435
17-03-18 03:39:11.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:11.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.634 -07 000000444 INF: FPGA: Recv ZSGSRD 35439
17-03-18 03:39:11.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.644 -07 000000626 INF: FPGA: Recv ZSGSRD 35441
17-03-18 03:39:11.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.654 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:11.654 -07 000000444 INF: FPGA: Recv ZPIEZORD 31186
17-03-18 03:39:11.664 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:39:11.664 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.599 V. Piezo Error = -9.4 V.
17-03-18 03:39:11.664 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.0 um, Read 10 ADC samples: Avg = 35438 (-167.1 uncal um), Error = 0.8 uncal um, Median = 35438 (-167.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35434 (-167.1 uncal um), Max = 35441 (-167.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:39:11.664 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35438, posNoise = 3, negNoise = 4
17-03-18 03:39:11.664 -07 000000610 INF: Z Motor: After move to -0.167961, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:11.664 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 108 ms (allowed 150 ms), total time = 1556 ms
17-03-18 03:39:11.664 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:11.714 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:39:11.714 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:11.714 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.16798458189086. ----------
17-03-18 03:39:11.714 -07 000000610 INF: Cycle	115	Tile	14	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:11.714 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36514, sync = True, waitForSettling = True)
17-03-18 03:39:11.714 -07 000000610 INF: Z Motor: Moving to -0.167150 mm, started at -0.167985 mm, distance = 0.83 um
17-03-18 03:39:11.714 -07 000000610 INF: FPGA: Xmit ZDACW 36514\n [Z Motor]
17-03-18 03:39:11.714 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:39:11.724 -07 000000610 INF: FPGA: 'ZDACW 36514' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:11.724 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:11.724 -07 000000611 INF: FPGA: Recv ZDACR 36514
17-03-18 03:39:11.734 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.734 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:11.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.884 -07 000000591 INF: FPGA: Recv ZSGSRD 35313
17-03-18 03:39:11.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:11.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.894 -07 000000611 INF: FPGA: Recv ZSGSRD 35310
17-03-18 03:39:11.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.904 -07 000000430 INF: FPGA: Recv ZSGSRD 35306
17-03-18 03:39:11.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.914 -07 000000461 INF: FPGA: Recv ZSGSRD 35305
17-03-18 03:39:11.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.924 -07 000000591 INF: FPGA: Recv ZSGSRD 35310
17-03-18 03:39:11.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.934 -07 000000430 INF: FPGA: Recv ZSGSRD 35310
17-03-18 03:39:11.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.944 -07 000000591 INF: FPGA: Recv ZSGSRD 35308
17-03-18 03:39:11.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.954 -07 000000502 INF: FPGA: Recv ZSGSRD 35313
17-03-18 03:39:11.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.964 -07 000000611 INF: FPGA: Recv ZSGSRD 35311
17-03-18 03:39:11.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:11.974 -07 000000461 INF: FPGA: Recv ZSGSRD 35314
17-03-18 03:39:11.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.984 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:11.984 -07 000000626 INF: FPGA: Recv ZPIEZORD 31016
17-03-18 03:39:11.994 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:11.994 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.572 V. Piezo Error = -9.5 V.
17-03-18 03:39:11.994 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.2 um, Read 10 ADC samples: Avg = 35310 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35310 (-166.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35305 (-166.3 uncal um), Max = 35314 (-166.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:39:11.994 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35310, posNoise = 4, negNoise = 5
17-03-18 03:39:11.994 -07 000000610 INF: Z Motor: After move to -0.167150, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:11.994 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:39:11.994 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:11.994 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:11.994 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:11.994 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:11.994 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:11.994 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:11.994 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:11.994 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:11.994 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:11.994 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:11.994 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:11.994 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:12.004 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:39:12.004 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:12.004 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:39:12.004 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:12.014 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:39:12.014 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:39:12.014 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:39:12.014 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:39:12.014 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 36691 150\n [Camera]
17-03-18 03:39:12.214 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:12.384 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.005817,
17-03-18 03:39:12.624 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:12.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:12.624 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:12.624 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:12.624 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:39:12.634 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:12.634 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:12.634 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:12.634 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:12.634 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:39:12.824 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36691 793
17-03-18 03:39:12.964 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:13.004 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:39:13.004 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:39:13.004 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:13.004 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:39:13.004 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:39:13.004 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:13.014 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:13.014 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:39:13.014 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:13.014 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:39:13.164 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:13.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:13.164 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:13.164 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:13.164 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 03:39:13.164 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:13.164 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:13.174 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:13.174 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:13.174 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:39:13.354 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:39:13.354 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:13.354 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 36691 150' command took 2 ms to send, 1329 ms to get response, and 1339 ms overall
17-03-18 03:39:13.364 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.167879
17-03-18 03:39:13.364 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16788 mm
17-03-18 03:39:13.364 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:13.364 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:39:13.364 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 36673, sync = True, waitForSettling = False)
17-03-18 03:39:13.364 -07 000000502 INF: Z Motor: Moving to -0.167878 mm, started at -0.167162 mm, distance = -0.72 um
17-03-18 03:39:13.364 -07 000000502 INF: FPGA: Xmit ZDACW 36673\n [Z Motor]
17-03-18 03:39:13.364 -07 000000626 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 03:39:13.364 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:39:13.374 -07 000000502 INF: FPGA: 'ZDACW 36673' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:13.374 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:13.374 -07 000000591 INF: FPGA: Recv ZDACR 36673
17-03-18 03:39:13.384 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:13.384 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:13.384 -07 000000502 INF: Z Motor: MoveAbsStepped took 15 ms (did NOT wait for settling yet))
17-03-18 03:39:13.384 -07 000000424 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:39:13.394 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 03:39:13.394 -07 000000626 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:13.394 -07 000000626 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:13.394 -07 000000626 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:39:13.394 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:13.554 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:39:13.554 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:39:13.554 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:13.554 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:13.554 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:39:13.554 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:39:13.554 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:39:13.554 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:13.564 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:13.564 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:39:13.764 -07 000000611 INF: FPGA: Recv YMVTILE
17-03-18 03:39:13.764 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:39:13.814 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:13.824 -07 000000461 INF: FPGA: Recv YRDPOS 146470
17-03-18 03:39:13.824 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:39:13.824 -07 000000626 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:13.824 -07 000000626 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:39:13.824 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.233 mm/sec
17-03-18 03:39:14.774 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:14.774 -07 000000430 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:39:14.784 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:14.784 -07 000000626 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:14.804 -07 000000626 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:14.804 -07 000000626 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:39:14.814 -07 000000626 INF: Y Motor: Moved to 71.5190 after 1444 ms (table move)
17-03-18 03:39:14.814 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167878 mm (DAC = 36673)
17-03-18 03:39:14.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:14.814 -07 000000430 INF: FPGA: Recv ZSGSRD 35425
17-03-18 03:39:14.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:39:14.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:14.824 -07 000000424 INF: FPGA: Recv ZSGSRD 35427
17-03-18 03:39:14.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:14.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:14.834 -07 000000591 INF: FPGA: Recv ZSGSRD 35423
17-03-18 03:39:14.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:14.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:14.844 -07 000000611 INF: FPGA: Recv ZSGSRD 35426
17-03-18 03:39:14.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:14.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:14.854 -07 000000430 INF: FPGA: Recv ZSGSRD 35426
17-03-18 03:39:14.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:14.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:14.864 -07 000000424 INF: FPGA: Recv ZSGSRD 35423
17-03-18 03:39:14.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:14.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:14.874 -07 000000461 INF: FPGA: Recv ZSGSRD 35423
17-03-18 03:39:14.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:14.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:14.884 -07 000000424 INF: FPGA: Recv ZSGSRD 35414
17-03-18 03:39:14.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:14.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:14.894 -07 000000444 INF: FPGA: Recv ZSGSRD 35420
17-03-18 03:39:14.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:14.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:14.904 -07 000000424 INF: FPGA: Recv ZSGSRD 35422
17-03-18 03:39:14.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:14.914 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:14.914 -07 000000461 INF: FPGA: Recv ZPIEZORD 31236
17-03-18 03:39:14.924 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:14.924 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.596 V. Piezo Error = -9.2 V.
17-03-18 03:39:14.924 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35423 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35423 (-167.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35414 (-167.0 uncal um), Max = 35427 (-167.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:39:14.924 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35423, posNoise = 4, negNoise = 9
17-03-18 03:39:14.924 -07 000000610 INF: Z Motor: After move to -0.167878, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:14.924 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 108 ms (allowed 150 ms), total time = 1555 ms
17-03-18 03:39:14.924 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:14.974 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1608 ms
17-03-18 03:39:14.974 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:14.974 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.167888218708733. ----------
17-03-18 03:39:14.974 -07 000000610 INF: Cycle	115	Tile	15	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:14.974 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36496, sync = True, waitForSettling = True)
17-03-18 03:39:14.974 -07 000000610 INF: Z Motor: Moving to -0.167068 mm, started at -0.167888 mm, distance = 0.82 um
17-03-18 03:39:14.974 -07 000000610 INF: FPGA: Xmit ZDACW 36496\n [Z Motor]
17-03-18 03:39:14.974 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 03:39:14.984 -07 000000610 INF: FPGA: 'ZDACW 36496' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:14.984 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:14.984 -07 000000424 INF: FPGA: Recv ZDACR 36496
17-03-18 03:39:14.994 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:14.994 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:15.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:15.144 -07 000000502 INF: FPGA: Recv ZSGSRD 35295
17-03-18 03:39:15.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:15.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:15.154 -07 000000444 INF: FPGA: Recv ZSGSRD 35300
17-03-18 03:39:15.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:15.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:15.164 -07 000000424 INF: FPGA: Recv ZSGSRD 35301
17-03-18 03:39:15.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:15.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:15.174 -07 000000444 INF: FPGA: Recv ZSGSRD 35302
17-03-18 03:39:15.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:15.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:15.184 -07 000000424 INF: FPGA: Recv ZSGSRD 35292
17-03-18 03:39:15.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:15.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:15.194 -07 000000444 INF: FPGA: Recv ZSGSRD 35302
17-03-18 03:39:15.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:15.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:15.204 -07 000000591 INF: FPGA: Recv ZSGSRD 35297
17-03-18 03:39:15.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:15.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:15.214 -07 000000430 INF: FPGA: Recv ZSGSRD 35290
17-03-18 03:39:15.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:15.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:15.224 -07 000000591 INF: FPGA: Recv ZSGSRD 35299
17-03-18 03:39:15.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:15.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:15.234 -07 000000424 INF: FPGA: Recv ZSGSRD 35302
17-03-18 03:39:15.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:15.244 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:15.244 -07 000000502 INF: FPGA: Recv ZPIEZORD 31031
17-03-18 03:39:15.254 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:15.254 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.569 V. Piezo Error = -9.4 V.
17-03-18 03:39:15.254 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35298 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35300 (-166.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35290 (-166.2 uncal um), Max = 35302 (-166.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:39:15.254 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35298, posNoise = 4, negNoise = 8
17-03-18 03:39:15.254 -07 000000610 INF: Z Motor: After move to -0.167068, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:15.254 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:39:15.254 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:15.254 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:15.254 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:15.254 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:15.254 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:15.254 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:15.254 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:15.254 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:15.254 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:15.254 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:15.254 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:15.254 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:15.264 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:39:15.264 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:15.264 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:39:15.264 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:15.274 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:39:15.274 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:39:15.274 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:39:15.274 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:39:15.274 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 36673 150\n [Camera]
17-03-18 03:39:15.474 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:15.884 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:15.884 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:15.884 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:15.884 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:15.884 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 03:39:15.894 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:15.894 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:15.894 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:15.894 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:15.894 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 03:39:16.084 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36673 793
17-03-18 03:39:16.224 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:16.264 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:39:16.264 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:39:16.264 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:16.264 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:39:16.264 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:39:16.264 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:16.274 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:16.274 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:39:16.274 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:16.284 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:39:16.424 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:16.424 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:16.424 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:16.424 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:16.424 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 03:39:16.424 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:16.424 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:16.434 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:16.434 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:16.434 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 03:39:16.594 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:16.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:16.614 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:39:16.614 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:16.614 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 36673 150' command took 2 ms to send, 1328 ms to get response, and 1338 ms overall
17-03-18 03:39:16.624 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:39:16.624 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51904296875, Z-Position -0.167085192191013. ------
17-03-18 03:39:16.624 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:39:16.624 -07 000000430 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.17348 mm
17-03-18 03:39:16.624 -07 000000430 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:16.624 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:39:16.624 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:39:16.624 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 37896, sync = True, waitForSettling = False)
17-03-18 03:39:16.624 -07 000000502 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-18 03:39:16.624 -07 000000424 INF: Z Motor: Moving to -0.173477 mm, started at -0.167085 mm, distance = -6.39 um
17-03-18 03:39:16.634 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:39:16.634 -07 000000424 INF: FPGA: Xmit ZDACW 37896\n [Z Motor]
17-03-18 03:39:16.634 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:39:16.644 -07 000000424 INF: FPGA: 'ZDACW 37896' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:16.644 -07 000000591 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:39:16.654 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:16.654 -07 000000501 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:39:16.664 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-18 03:39:16.664 -07 000000502 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:16.664 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:16.664 -07 000000502 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:16.664 -07 000000502 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:39:16.664 -07 000000611 INF: FPGA: Recv ZDACR 37896
17-03-18 03:39:16.674 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:39:16.674 -07 000000424 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-18 03:39:16.674 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:16.804 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:39:16.804 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:39:16.804 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:16.804 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:39:16.804 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:39:16.804 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:16.814 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:16.814 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:16.814 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:39:16.814 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:39:16.844 -07 000000626 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:39:16.844 -07 000000591 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 212 ms overall
17-03-18 03:39:17.044 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:39:17.044 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:39:17.094 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:17.104 -07 000000611 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:39:17.104 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:17.104 -07 000000502 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:17.104 -07 000000502 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 03:39:17.104 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.174 mm/sec
17-03-18 03:39:17.764 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.005817,
17-03-18 03:39:18.054 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:18.054 -07 000000569 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:39:18.064 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:18.064 -07 000000502 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:18.094 -07 000000502 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:18.094 -07 000000502 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:39:18.094 -07 000000502 INF: Y Motor: Moved to 72.3496 after 1463 ms (table move)
17-03-18 03:39:18.094 -07 000000430 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173477 mm (DAC = 37896)
17-03-18 03:39:18.114 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:18.114 -07 000000424 INF: FPGA: Recv ZSGSRD 36296
17-03-18 03:39:18.124 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-18 03:39:18.124 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:18.124 -07 000000444 INF: FPGA: Recv ZSGSRD 36292
17-03-18 03:39:18.134 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:18.134 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:18.134 -07 000000626 INF: FPGA: Recv ZSGSRD 36294
17-03-18 03:39:18.144 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:18.144 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:18.144 -07 000000502 INF: FPGA: Recv ZSGSRD 36292
17-03-18 03:39:18.154 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:18.154 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:18.154 -07 000000502 INF: FPGA: Recv ZSGSRD 36292
17-03-18 03:39:18.164 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:18.164 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:18.164 -07 000000502 INF: FPGA: Recv ZSGSRD 36297
17-03-18 03:39:18.174 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:18.174 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:18.174 -07 000000591 INF: FPGA: Recv ZSGSRD 36296
17-03-18 03:39:18.184 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:18.184 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:18.184 -07 000000591 INF: FPGA: Recv ZSGSRD 36302
17-03-18 03:39:18.194 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:18.194 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:18.194 -07 000000502 INF: FPGA: Recv ZSGSRD 36294
17-03-18 03:39:18.204 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:18.204 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:18.204 -07 000000606 INF: FPGA: Recv ZSGSRD 36292
17-03-18 03:39:18.214 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:18.214 -07 000000430 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:18.214 -07 000000606 INF: FPGA: Recv ZPIEZORD 32376
17-03-18 03:39:18.224 -07 000000430 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:18.224 -07 000000430 INF: Z Motor: Piezo is near 49.2 V (nominally 0 to 100 V), expect near 57.8 V, since DAC is at 5.783 V. Piezo Error = -8.7 V.
17-03-18 03:39:18.224 -07 000000430 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.5 um, Read 10 ADC samples: Avg = 36295 (-172.6 uncal um), Error = 0.9 uncal um, Median = 36294 (-172.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36292 (-172.6 uncal um), Max = 36302 (-172.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:39:18.224 -07 000000430 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36295, posNoise = 7, negNoise = 3
17-03-18 03:39:18.224 -07 000000430 INF: Z Motor: After move to -0.173477, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:18.224 -07 000000430 INF: Z Motor: Settle wait time = 1467 ms, measure time = 124 ms (allowed 150 ms), total time = 1591 ms
17-03-18 03:39:18.224 -07 000000430 INF: Z Motor: Waiting extra 26 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:18.254 -07 000000430 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1625 ms
17-03-18 03:39:18.254 -07 000000430 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:18.254 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:18.254 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:18.254 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:18.254 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:39:18.254 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:18.254 -07 000000585 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:18.254 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:18.254 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:39:18.264 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:39:18.264 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:39:18.274 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:39:18.274 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 03:39:18.274 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:39:18.324 -07 000000606 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:39:18.624 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:39:18.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:39:18.624 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:39:18.624 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) start.
17-03-18 03:39:18.664 -07 000000430 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:39:18.664 -07 000000569 INF: FPGA: Recv CAMSNAP
17-03-18 03:39:18.664 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 384 ms overall
17-03-18 03:39:18.754 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:39:18.754 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:18.754 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:39:18.754 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:39:18.764 -07 000000430 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:39:18.764 -07 000000611 INF: Autofocus start
17-03-18 03:39:18.764 -07 000000611 INF: MeasureProfile start
17-03-18 03:39:18.764 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:39:18.774 -07 000000430 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:39:18.774 -07 000000430 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:39:18.774 -07 000000611 INF: MeasureProfile done
17-03-18 03:39:18.774 -07 000000611 INF: X=0  Z correction [um]=-0.0713522
17-03-18 03:39:18.774 -07 000000611 INF: Autofocus finished
17-03-18 03:39:18.974 -07 000000591 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:39:18.974 -07 000000430 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:39:18.974 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.173490131696349. ----------
17-03-18 03:39:18.984 -07 000000610 INF: Cycle	115	Tile	16	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:18.984 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36393, sync = True, waitForSettling = True)
17-03-18 03:39:18.984 -07 000000610 INF: Z Motor: Moving to -0.166596 mm, started at -0.173490 mm, distance = 6.89 um
17-03-18 03:39:18.984 -07 000000610 INF: FPGA: Xmit ZDACW 36393\n [Z Motor]
17-03-18 03:39:18.984 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:39:18.994 -07 000000610 INF: FPGA: 'ZDACW 36393' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:39:18.994 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:18.994 -07 000000611 INF: FPGA: Recv ZDACR 36393
17-03-18 03:39:19.004 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:19.004 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:19.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:19.154 -07 000000569 INF: FPGA: Recv ZSGSRD 35228
17-03-18 03:39:19.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:19.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:19.164 -07 000000611 INF: FPGA: Recv ZSGSRD 35219
17-03-18 03:39:19.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:19.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:19.174 -07 000000430 INF: FPGA: Recv ZSGSRD 35222
17-03-18 03:39:19.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:19.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:19.184 -07 000000569 INF: FPGA: Recv ZSGSRD 35226
17-03-18 03:39:19.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:19.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:19.194 -07 000000430 INF: FPGA: Recv ZSGSRD 35232
17-03-18 03:39:19.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:19.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:19.204 -07 000000430 INF: FPGA: Recv ZSGSRD 35225
17-03-18 03:39:19.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:19.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:19.214 -07 000000611 INF: FPGA: Recv ZSGSRD 35223
17-03-18 03:39:19.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:19.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:19.224 -07 000000430 INF: FPGA: Recv ZSGSRD 35223
17-03-18 03:39:19.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:19.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:19.234 -07 000000611 INF: FPGA: Recv ZSGSRD 35225
17-03-18 03:39:19.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:19.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:19.244 -07 000000591 INF: FPGA: Recv ZSGSRD 35223
17-03-18 03:39:19.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:19.254 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:19.254 -07 000000611 INF: FPGA: Recv ZPIEZORD 30938
17-03-18 03:39:19.264 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:19.264 -07 000000610 INF: Z Motor: Piezo is near 46.1 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.553 V. Piezo Error = -9.4 V.
17-03-18 03:39:19.264 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.6 um, Read 10 ADC samples: Avg = 35225 (-165.7 uncal um), Error = 0.8 uncal um, Median = 35224 (-165.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35219 (-165.7 uncal um), Max = 35232 (-165.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:39:19.264 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35225, posNoise = 7, negNoise = 6
17-03-18 03:39:19.264 -07 000000610 INF: Z Motor: After move to -0.166596, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:19.264 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:39:19.264 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:19.264 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:19.264 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:19.264 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:19.264 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:19.264 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:19.264 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:19.264 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:19.264 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:39:19.264 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:19.264 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:19.264 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:19.274 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:39:19.274 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:19.274 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:39:19.274 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:19.284 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:39:19.284 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:39:19.284 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:39:19.284 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:39:19.284 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 36570 150\n [Camera]
17-03-18 03:39:19.484 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:19.894 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:19.894 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:19.894 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:19.894 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:19.894 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-18 03:39:19.894 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:19.894 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:19.894 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:19.894 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:19.894 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-18 03:39:20.084 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36570 793
17-03-18 03:39:20.234 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:20.274 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:39:20.274 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:39:20.274 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:20.274 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:20.274 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:39:20.274 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:39:20.274 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:20.274 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:20.274 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:39:20.284 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:39:20.424 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:20.424 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:20.434 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:20.434 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:20.434 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-18 03:39:20.434 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:20.434 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:20.434 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:20.434 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:20.434 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-18 03:39:20.624 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:39:20.624 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:20.624 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 36570 150' command took 2 ms to send, 1331 ms to get response, and 1338 ms overall
17-03-18 03:39:20.624 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.167106
17-03-18 03:39:20.624 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16711 mm
17-03-18 03:39:20.624 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:20.624 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 36504, sync = True, waitForSettling = False)
17-03-18 03:39:20.624 -07 000000461 INF: Z Motor: Moving to -0.167105 mm, started at -0.166616 mm, distance = -0.49 um
17-03-18 03:39:20.624 -07 000000461 INF: FPGA: Xmit ZDACW 36504\n [Z Motor]
17-03-18 03:39:20.624 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:39:20.624 -07 000000611 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 03:39:20.624 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:39:20.634 -07 000000461 INF: FPGA: 'ZDACW 36504' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:20.634 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:20.634 -07 000000626 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:39:20.644 -07 000000611 INF: FPGA: 'YRDPOS' command took 3 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:39:20.644 -07 000000611 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:20.644 -07 000000611 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:20.644 -07 000000611 INF: Y Motor: Moving 1349 steps-27
17-03-18 03:39:20.644 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:20.644 -07 000000424 INF: FPGA: Recv ZDACR 36504
17-03-18 03:39:20.654 -07 000000461 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:39:20.654 -07 000000461 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 03:39:20.654 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:20.814 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:39:20.814 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:39:20.814 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:20.814 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:39:20.814 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:39:20.814 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:20.824 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:20.824 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 03:39:20.824 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:39:20.824 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:39:21.024 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:39:21.024 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:39:21.074 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:21.074 -07 000000626 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:39:21.084 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:21.084 -07 000000611 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:21.084 -07 000000611 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 03:39:21.084 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.843 mm, average velocity = 2.173 mm/sec
17-03-18 03:39:21.594 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:21.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:22.034 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:22.034 -07 000000626 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:39:22.044 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.044 -07 000000611 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:22.064 -07 000000611 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:22.064 -07 000000611 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:39:22.064 -07 000000611 INF: Y Motor: Moved to 73.1763 after 1442 ms (table move)
17-03-18 03:39:22.074 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167105 mm (DAC = 36504)
17-03-18 03:39:22.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.074 -07 000000461 INF: FPGA: Recv ZSGSRD 35302
17-03-18 03:39:22.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:39:22.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.084 -07 000000424 INF: FPGA: Recv ZSGSRD 35301
17-03-18 03:39:22.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.094 -07 000000611 INF: FPGA: Recv ZSGSRD 35307
17-03-18 03:39:22.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.104 -07 000000424 INF: FPGA: Recv ZSGSRD 35306
17-03-18 03:39:22.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.114 -07 000000611 INF: FPGA: Recv ZSGSRD 35309
17-03-18 03:39:22.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.124 -07 000000424 INF: FPGA: Recv ZSGSRD 35303
17-03-18 03:39:22.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.134 -07 000000430 INF: FPGA: Recv ZSGSRD 35303
17-03-18 03:39:22.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.144 -07 000000626 INF: FPGA: Recv ZSGSRD 35302
17-03-18 03:39:22.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.154 -07 000000430 INF: FPGA: Recv ZSGSRD 35298
17-03-18 03:39:22.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.164 -07 000000626 INF: FPGA: Recv ZSGSRD 35299
17-03-18 03:39:22.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.174 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:22.174 -07 000000430 INF: FPGA: Recv ZPIEZORD 31089
17-03-18 03:39:22.184 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.184 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.570 V. Piezo Error = -9.3 V.
17-03-18 03:39:22.184 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35303 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35302 (-166.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35298 (-166.2 uncal um), Max = 35309 (-166.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:39:22.184 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35303, posNoise = 6, negNoise = 5
17-03-18 03:39:22.184 -07 000000610 INF: Z Motor: After move to -0.167105, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:22.184 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 108 ms (allowed 150 ms), total time = 1554 ms
17-03-18 03:39:22.184 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:22.234 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms
17-03-18 03:39:22.234 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:22.234 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.167117313251722. ----------
17-03-18 03:39:22.234 -07 000000610 INF: Cycle	115	Tile	17	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:22.234 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36328, sync = True, waitForSettling = True)
17-03-18 03:39:22.234 -07 000000610 INF: Z Motor: Moving to -0.166299 mm, started at -0.167117 mm, distance = 0.82 um
17-03-18 03:39:22.234 -07 000000610 INF: FPGA: Xmit ZDACW 36328\n [Z Motor]
17-03-18 03:39:22.234 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:39:22.244 -07 000000610 INF: FPGA: 'ZDACW 36328' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:22.244 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:22.244 -07 000000591 INF: FPGA: Recv ZDACR 36328
17-03-18 03:39:22.254 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.254 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:22.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.404 -07 000000626 INF: FPGA: Recv ZSGSRD 35172
17-03-18 03:39:22.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:22.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.414 -07 000000430 INF: FPGA: Recv ZSGSRD 35184
17-03-18 03:39:22.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:22.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.424 -07 000000626 INF: FPGA: Recv ZSGSRD 35178
17-03-18 03:39:22.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.434 -07 000000424 INF: FPGA: Recv ZSGSRD 35180
17-03-18 03:39:22.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.444 -07 000000611 INF: FPGA: Recv ZSGSRD 35181
17-03-18 03:39:22.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.454 -07 000000461 INF: FPGA: Recv ZSGSRD 35176
17-03-18 03:39:22.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.464 -07 000000569 INF: FPGA: Recv ZSGSRD 35177
17-03-18 03:39:22.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.474 -07 000000611 INF: FPGA: Recv ZSGSRD 35178
17-03-18 03:39:22.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.484 -07 000000626 INF: FPGA: Recv ZSGSRD 35179
17-03-18 03:39:22.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:22.494 -07 000000424 INF: FPGA: Recv ZSGSRD 35176
17-03-18 03:39:22.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.504 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:22.504 -07 000000611 INF: FPGA: Recv ZPIEZORD 30909
17-03-18 03:39:22.514 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:22.514 -07 000000610 INF: Z Motor: Piezo is near 46.0 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.543 V. Piezo Error = -9.4 V.
17-03-18 03:39:22.514 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.3 um, Read 10 ADC samples: Avg = 35178 (-165.4 uncal um), Error = 0.9 uncal um, Median = 35178 (-165.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35172 (-165.4 uncal um), Max = 35184 (-165.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:39:22.514 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35178, posNoise = 6, negNoise = 6
17-03-18 03:39:22.514 -07 000000610 INF: Z Motor: After move to -0.166299, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:22.514 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:39:22.514 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:22.514 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:22.514 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:22.514 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:22.514 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:22.514 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:22.514 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:22.514 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:22.514 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:39:22.514 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:22.514 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:39:22.514 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:22.524 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:39:22.524 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:22.524 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:39:22.524 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:22.534 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 03:39:22.534 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:39:22.534 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 03:39:22.534 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:39:22.534 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 36504 150\n [Camera]
17-03-18 03:39:22.734 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:23.124 -07 000000585 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.000345,
17-03-18 03:39:23.144 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:23.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:23.144 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:23.144 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:23.144 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-18 03:39:23.144 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:23.144 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:23.144 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:23.144 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:23.144 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-18 03:39:23.334 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36504 793
17-03-18 03:39:23.484 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:23.524 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:39:23.524 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:39:23.524 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:23.524 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:39:23.524 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:39:23.524 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:23.534 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:39:23.534 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:39:23.534 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:23.544 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:39:23.684 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:23.684 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:23.684 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:23.684 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:23.684 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-18 03:39:23.684 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:23.684 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:23.684 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:23.684 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:23.684 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start.
17-03-18 03:39:23.874 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:39:23.874 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:23.874 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 36504 150' command took 2 ms to send, 1332 ms to get response, and 1338 ms overall
17-03-18 03:39:23.874 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166735
17-03-18 03:39:23.874 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16674 mm
17-03-18 03:39:23.874 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:23.874 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:39:23.874 -07 000000461 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-18 03:39:23.874 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 36423, sync = True, waitForSettling = False)
17-03-18 03:39:23.874 -07 000000502 INF: Z Motor: Moving to -0.166734 mm, started at -0.166314 mm, distance = -0.42 um
17-03-18 03:39:23.874 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:23.884 -07 000000501 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:39:23.884 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:23.884 -07 000000461 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:23.884 -07 000000461 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:23.884 -07 000000461 INF: Y Motor: Moving 1354 steps-33
17-03-18 03:39:23.884 -07 000000502 INF: FPGA: Xmit ZDACW 36423\n [Z Motor]
17-03-18 03:39:23.884 -07 000000608 INF: FPGA: Recv ZDACW
17-03-18 03:39:23.894 -07 000000502 INF: FPGA: 'ZDACW 36423' command took 1 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:39:23.894 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:23.904 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:23.904 -07 000000424 INF: FPGA: Recv ZDACR 36423
17-03-18 03:39:23.914 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:39:23.914 -07 000000502 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:39:24.064 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:39:24.064 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:39:24.064 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:24.064 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:39:24.064 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:39:24.064 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:24.074 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:24.074 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:39:24.074 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:24.074 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:39:24.274 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-18 03:39:24.274 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 3 ms to send, 371 ms to get response, and 389 ms overall
17-03-18 03:39:24.304 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:24.314 -07 000000430 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:39:24.324 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:24.324 -07 000000461 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:24.324 -07 000000461 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:39:24.324 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.846 mm, average velocity = 2.170 mm/sec
17-03-18 03:39:25.274 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:25.274 -07 000000569 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:39:25.284 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:25.284 -07 000000461 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:25.304 -07 000000461 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:25.304 -07 000000461 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:39:25.304 -07 000000461 INF: Y Motor: Moved to 74.0083 after 1425 ms (table move)
17-03-18 03:39:25.304 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166734 mm (DAC = 36423)
17-03-18 03:39:25.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.314 -07 000000611 INF: FPGA: Recv ZSGSRD 35246
17-03-18 03:39:25.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:25.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.314 -07 000000502 INF: FPGA: Recv ZSGSRD 35247
17-03-18 03:39:25.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.324 -07 000000585 INF: FPGA: Recv ZSGSRD 35241
17-03-18 03:39:25.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.334 -07 000000430 INF: FPGA: Recv ZSGSRD 35244
17-03-18 03:39:25.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.344 -07 000000611 INF: FPGA: Recv ZSGSRD 35244
17-03-18 03:39:25.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.354 -07 000000461 INF: FPGA: Recv ZSGSRD 35247
17-03-18 03:39:25.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.364 -07 000000591 INF: FPGA: Recv ZSGSRD 35248
17-03-18 03:39:25.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.374 -07 000000502 INF: FPGA: Recv ZSGSRD 35252
17-03-18 03:39:25.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.384 -07 000000626 INF: FPGA: Recv ZSGSRD 35250
17-03-18 03:39:25.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.394 -07 000000608 INF: FPGA: Recv ZSGSRD 35241
17-03-18 03:39:25.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:25.404 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:25.404 -07 000000611 INF: FPGA: Recv ZPIEZORD 30995
17-03-18 03:39:25.414 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.414 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.558 V. Piezo Error = -9.4 V.
17-03-18 03:39:25.414 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.7 um, Read 10 ADC samples: Avg = 35246 (-165.9 uncal um), Error = 0.8 uncal um, Median = 35246 (-165.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35241 (-165.9 uncal um), Max = 35252 (-165.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:39:25.414 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35246, posNoise = 6, negNoise = 5
17-03-18 03:39:25.414 -07 000000610 INF: Z Motor: After move to -0.166734, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:25.414 -07 000000610 INF: Z Motor: Settle wait time = 1428 ms, measure time = 105 ms (allowed 150 ms), total time = 1533 ms
17-03-18 03:39:25.414 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:25.464 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-18 03:39:25.464 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:25.464 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.166751133159642. ----------
17-03-18 03:39:25.464 -07 000000610 INF: Cycle	115	Tile	18	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:25.464 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36247, sync = True, waitForSettling = True)
17-03-18 03:39:25.464 -07 000000610 INF: Z Motor: Moving to -0.165928 mm, started at -0.166751 mm, distance = 0.82 um
17-03-18 03:39:25.464 -07 000000610 INF: FPGA: Xmit ZDACW 36247\n [Z Motor]
17-03-18 03:39:25.464 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:39:25.474 -07 000000610 INF: FPGA: 'ZDACW 36247' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:25.474 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:25.474 -07 000000438 INF: FPGA: Recv ZDACR 36247
17-03-18 03:39:25.484 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.484 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:25.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.634 -07 000000626 INF: FPGA: Recv ZSGSRD 35118
17-03-18 03:39:25.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:25.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.644 -07 000000611 INF: FPGA: Recv ZSGSRD 35119
17-03-18 03:39:25.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.654 -07 000000430 INF: FPGA: Recv ZSGSRD 35120
17-03-18 03:39:25.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.664 -07 000000461 INF: FPGA: Recv ZSGSRD 35119
17-03-18 03:39:25.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.674 -07 000000626 INF: FPGA: Recv ZSGSRD 35122
17-03-18 03:39:25.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.684 -07 000000430 INF: FPGA: Recv ZSGSRD 35121
17-03-18 03:39:25.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.694 -07 000000626 INF: FPGA: Recv ZSGSRD 35125
17-03-18 03:39:25.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.704 -07 000000430 INF: FPGA: Recv ZSGSRD 35119
17-03-18 03:39:25.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.714 -07 000000626 INF: FPGA: Recv ZSGSRD 35116
17-03-18 03:39:25.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:25.724 -07 000000461 INF: FPGA: Recv ZSGSRD 35121
17-03-18 03:39:25.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.734 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:25.734 -07 000000591 INF: FPGA: Recv ZPIEZORD 30797
17-03-18 03:39:25.744 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:25.744 -07 000000610 INF: Z Motor: Piezo is near 45.8 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.531 V. Piezo Error = -9.5 V.
17-03-18 03:39:25.744 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.9 um, Read 10 ADC samples: Avg = 35120 (-165.1 uncal um), Error = 0.9 uncal um, Median = 35120 (-165.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35116 (-165.1 uncal um), Max = 35125 (-165.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:39:25.744 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35120, posNoise = 5, negNoise = 4
17-03-18 03:39:25.744 -07 000000610 INF: Z Motor: After move to -0.165928, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:25.744 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:39:25.744 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:25.744 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:25.744 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:25.744 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:25.744 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:25.744 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:25.744 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:25.744 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:25.744 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:25.744 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:25.744 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:39:25.744 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:25.754 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:39:25.754 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:25.754 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:39:25.754 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:25.764 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:39:25.764 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:39:25.764 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:39:25.764 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:39:25.764 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 36423 150\n [Camera]
17-03-18 03:39:25.964 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:26.374 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:26.374 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:26.374 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:26.374 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:26.374 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start.
17-03-18 03:39:26.384 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:26.384 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:26.384 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:26.384 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:26.384 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start.
17-03-18 03:39:26.574 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36423 793
17-03-18 03:39:26.594 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:26.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:26.714 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:26.764 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:39:26.764 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:39:26.764 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:26.764 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:39:26.764 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:26.764 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:39:26.764 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:39:26.764 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:26.764 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:26.774 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:39:26.914 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:26.914 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:26.914 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:26.914 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:26.914 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-18 03:39:26.914 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:26.914 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:26.924 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:26.924 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:26.924 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) start.
17-03-18 03:39:27.114 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1335
17-03-18 03:39:27.114 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:27.114 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 36423 150' command took 2 ms to send, 1331 ms to get response, and 1342 ms overall
17-03-18 03:39:27.114 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.165769
17-03-18 03:39:27.114 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16577 mm
17-03-18 03:39:27.114 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:27.114 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:39:27.114 -07 000000626 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 03:39:27.114 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 36212, sync = True, waitForSettling = False)
17-03-18 03:39:27.114 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:27.114 -07 000000461 INF: Z Motor: Moving to -0.165768 mm, started at -0.165942 mm, distance = 0.17 um
17-03-18 03:39:27.114 -07 000000606 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:39:27.124 -07 000000461 INF: FPGA: Xmit ZDACW 36212\n [Z Motor]
17-03-18 03:39:27.124 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:27.124 -07 000000626 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:27.124 -07 000000626 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:27.124 -07 000000626 INF: Y Motor: Moving 1351 steps-30
17-03-18 03:39:27.124 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 03:39:27.134 -07 000000461 INF: FPGA: 'ZDACW 36212' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:39:27.134 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:27.144 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:27.144 -07 000000606 INF: FPGA: Recv ZDACR 36212
17-03-18 03:39:27.154 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:39:27.154 -07 000000461 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet))
17-03-18 03:39:27.294 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:39:27.294 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:39:27.294 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:27.304 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:39:27.304 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:39:27.304 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:27.304 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:27.304 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:39:27.304 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:27.314 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:39:27.504 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:39:27.514 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 389 ms overall
17-03-18 03:39:27.544 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:27.544 -07 000000461 INF: FPGA: Recv YRDPOS 153255
17-03-18 03:39:27.554 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:27.554 -07 000000626 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:27.554 -07 000000626 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-18 03:39:27.554 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.844 mm, average velocity = 2.170 mm/sec
17-03-18 03:39:28.504 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:28.504 -07 000000611 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.020806,
17-03-18 03:39:28.504 -07 000000591 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:39:28.514 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.514 -07 000000626 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:28.534 -07 000000626 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:28.534 -07 000000626 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:39:28.534 -07 000000626 INF: Y Motor: Moved to 74.8320 after 1415 ms (table move)
17-03-18 03:39:28.534 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.165768 mm (DAC = 36212)
17-03-18 03:39:28.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.554 -07 000000606 INF: FPGA: Recv ZSGSRD 35089
17-03-18 03:39:28.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:39:28.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.564 -07 000000438 INF: FPGA: Recv ZSGSRD 35094
17-03-18 03:39:28.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.574 -07 000000569 INF: FPGA: Recv ZSGSRD 35100
17-03-18 03:39:28.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.584 -07 000000608 INF: FPGA: Recv ZSGSRD 35102
17-03-18 03:39:28.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.594 -07 000000444 INF: FPGA: Recv ZSGSRD 35099
17-03-18 03:39:28.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.604 -07 000000569 INF: FPGA: Recv ZSGSRD 35096
17-03-18 03:39:28.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.614 -07 000000608 INF: FPGA: Recv ZSGSRD 35091
17-03-18 03:39:28.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.624 -07 000000569 INF: FPGA: Recv ZSGSRD 35086
17-03-18 03:39:28.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.634 -07 000000608 INF: FPGA: Recv ZSGSRD 35085
17-03-18 03:39:28.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.644 -07 000000569 INF: FPGA: Recv ZSGSRD 35096
17-03-18 03:39:28.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.654 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:28.654 -07 000000502 INF: FPGA: Recv ZPIEZORD 30776
17-03-18 03:39:28.664 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.664 -07 000000610 INF: Z Motor: Piezo is near 45.7 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.526 V. Piezo Error = -9.5 V.
17-03-18 03:39:28.664 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.8 um, Read 10 ADC samples: Avg = 35094 (-164.9 uncal um), Error = 0.9 uncal um, Median = 35095 (-164.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35085 (-164.9 uncal um), Max = 35102 (-165.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:39:28.664 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35094, posNoise = 8, negNoise = 9
17-03-18 03:39:28.664 -07 000000610 INF: Z Motor: After move to -0.165768, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:28.664 -07 000000610 INF: Z Motor: Settle wait time = 1417 ms, measure time = 126 ms (allowed 150 ms), total time = 1543 ms
17-03-18 03:39:28.664 -07 000000610 INF: Z Motor: Waiting extra 24 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:28.694 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1576 ms
17-03-18 03:39:28.694 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:28.694 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.165774652914094. ----------
17-03-18 03:39:28.694 -07 000000610 INF: Cycle	115	Tile	19	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:28.694 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36035, sync = True, waitForSettling = True)
17-03-18 03:39:28.694 -07 000000610 INF: Z Motor: Moving to -0.164958 mm, started at -0.165775 mm, distance = 0.82 um
17-03-18 03:39:28.694 -07 000000610 INF: FPGA: Xmit ZDACW 36035\n [Z Motor]
17-03-18 03:39:28.694 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:39:28.704 -07 000000610 INF: FPGA: 'ZDACW 36035' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:28.704 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:28.704 -07 000000611 INF: FPGA: Recv ZDACR 36035
17-03-18 03:39:28.714 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.714 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:28.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.864 -07 000000438 INF: FPGA: Recv ZSGSRD 34964
17-03-18 03:39:28.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:28.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.874 -07 000000569 INF: FPGA: Recv ZSGSRD 34969
17-03-18 03:39:28.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.884 -07 000000444 INF: FPGA: Recv ZSGSRD 34972
17-03-18 03:39:28.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.894 -07 000000569 INF: FPGA: Recv ZSGSRD 34971
17-03-18 03:39:28.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.904 -07 000000438 INF: FPGA: Recv ZSGSRD 34972
17-03-18 03:39:28.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.914 -07 000000626 INF: FPGA: Recv ZSGSRD 34968
17-03-18 03:39:28.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.924 -07 000000608 INF: FPGA: Recv ZSGSRD 34972
17-03-18 03:39:28.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.934 -07 000000585 INF: FPGA: Recv ZSGSRD 34967
17-03-18 03:39:28.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.944 -07 000000502 INF: FPGA: Recv ZSGSRD 34965
17-03-18 03:39:28.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:28.954 -07 000000606 INF: FPGA: Recv ZSGSRD 34971
17-03-18 03:39:28.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.964 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:28.964 -07 000000424 INF: FPGA: Recv ZPIEZORD 30662
17-03-18 03:39:28.974 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:28.974 -07 000000610 INF: Z Motor: Piezo is near 45.5 V (nominally 0 to 100 V), expect near 55.0 V, since DAC is at 5.499 V. Piezo Error = -9.5 V.
17-03-18 03:39:28.974 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.0 um, Read 10 ADC samples: Avg = 34969 (-164.1 uncal um), Error = 0.8 uncal um, Median = 34970 (-164.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 34964 (-164.1 uncal um), Max = 34972 (-164.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:39:28.974 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34969, posNoise = 3, negNoise = 5
17-03-18 03:39:28.974 -07 000000610 INF: Z Motor: After move to -0.164958, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:28.974 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:39:28.974 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:28.974 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:28.974 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:28.974 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:28.974 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:28.974 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:28.974 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:28.974 -07 000000585 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:28.974 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:28.974 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:28.974 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:28.974 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:28.974 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:39:28.974 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:28.984 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:39:28.984 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:28.994 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:39:28.994 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:39:28.994 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:39:28.994 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:39:29.004 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 36212 150\n [Camera]
17-03-18 03:39:29.194 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:29.614 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:29.614 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:29.614 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:29.614 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:29.614 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) start.
17-03-18 03:39:29.614 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:29.614 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:29.614 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:29.774 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:29.774 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-18 03:39:29.804 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36212 793
17-03-18 03:39:29.954 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:30.014 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) end. Duration was 401 ms.
17-03-18 03:39:30.014 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:39:30.014 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:30.014 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:30.014 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 03:39:30.144 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:39:30.144 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:39:30.144 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:30.144 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:30.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:30.144 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:30.144 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:30.154 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:30.154 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:30.154 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:30.154 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 542 ms.
17-03-18 03:39:30.154 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:30.154 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) start.
17-03-18 03:39:30.154 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:30.154 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) start.
17-03-18 03:39:30.334 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:39:30.334 -07 000000608 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:30.334 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 36212 150' command took 2 ms to send, 1328 ms to get response, and 1338 ms overall
17-03-18 03:39:30.534 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:39:30.534 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:39:30.534 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:30.544 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:39:30.544 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:39:30.544 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:30.544 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:30.544 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:30.544 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:39:30.544 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:39:30.544 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:39:30.584 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:39:30.584 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:39:30.624 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 03:39:30.634 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-18 03:39:30.634 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:39:30.634 -07 000000606 INF: FPGA: Recv EMCUR 
17-03-18 03:39:30.644 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:39:30.644 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-18 03:39:31.144 -07 000000438 INF: FPGA: Recv EMIN
17-03-18 03:39:31.144 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 03:39:31.144 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-18 03:39:31.144 -07 000000444 INF: FPGA: Recv EMCUR 
17-03-18 03:39:31.154 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:39:31.154 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:39:31.154 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83203125, Z-Position -0.164971626396374. ------
17-03-18 03:39:31.154 -07 000000611 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:39:31.154 -07 000000585 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13951 mm
17-03-18 03:39:31.154 -07 000000585 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:31.154 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:39:31.154 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 30476, sync = True, waitForSettling = False)
17-03-18 03:39:31.154 -07 000000501 INF: Z Motor: Moving to -0.139510 mm, started at -0.164972 mm, distance = 25.46 um
17-03-18 03:39:31.154 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:39:31.154 -07 000000438 INF: Y Motor: Moving to 59.9126 mm, started at 74.8320 mm, delta = -14.9194 mm
17-03-18 03:39:31.164 -07 000000611 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:39:31.164 -07 000000501 INF: FPGA: Xmit ZDACW 30476\n [Z Motor]
17-03-18 03:39:31.164 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:39:31.174 -07 000000501 INF: FPGA: 'ZDACW 30476' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:39:31.174 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:31.174 -07 000000444 INF: FPGA: Recv YRDPOS 153257
17-03-18 03:39:31.184 -07 000000611 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:39:31.184 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 21 ms overall
17-03-18 03:39:31.184 -07 000000438 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:31.184 -07 000000438 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-18 03:39:31.184 -07 000000438 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:39:31.194 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:31.194 -07 000000606 INF: FPGA: Recv ZDACR 30476
17-03-18 03:39:31.204 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:39:31.204 -07 000000501 INF: Z Motor: MoveAbsStepped took 42 ms (did NOT wait for settling yet))
17-03-18 03:39:31.204 -07 000000438 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:39:31.384 -07 000000430 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:39:31.384 -07 000000611 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:39:31.594 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:31.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:32.824 -07 000000591 INF: FPGA: Recv YMVTO 122703 23904
17-03-18 03:39:32.824 -07 000000438 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1618 ms to get response, and 1642 ms overall
17-03-18 03:39:32.824 -07 000000438 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:39:32.824 -07 000000438 INF: Y Motor: To move from 74.833 to 59.913 (-14.919 mm) should take 23872 steps, but required 23904 steps (14.940 mm). Slippage = 0.020 mm (0.00%).
17-03-18 03:39:32.824 -07 000000438 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1643 ms, distance = 14.919 mm, average velocity = 9.081 mm/sec
17-03-18 03:39:33.874 -07 000000611 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.027603,
17-03-18 03:39:35.674 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:35.674 -07 000000611 INF: FPGA: Recv YRDPOS 122698
17-03-18 03:39:35.684 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:35.684 -07 000000438 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:35.714 -07 000000438 INF: Y Motor: After move to 59.912609, error = -0.001476, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:35.714 -07 000000438 INF: Y Motor: Position error after settling = -3 encoder counts (-0.001 mm), Delta during settling = -5 counts (-0.002 mm)
17-03-18 03:39:35.714 -07 000000438 INF: Y Motor: Moved to 59.9111 after 4560 ms
17-03-18 03:39:35.724 -07 000000585 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139510 mm (DAC = 30476)
17-03-18 03:39:35.724 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:35.724 -07 000000606 INF: FPGA: Recv ZSGSRD 31007
17-03-18 03:39:35.734 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:39:35.734 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:35.734 -07 000000438 INF: FPGA: Recv ZSGSRD 31005
17-03-18 03:39:35.744 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:35.744 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:35.744 -07 000000444 INF: FPGA: Recv ZSGSRD 31004
17-03-18 03:39:35.754 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:35.754 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:35.754 -07 000000626 INF: FPGA: Recv ZSGSRD 31005
17-03-18 03:39:35.764 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:35.764 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:35.764 -07 000000461 INF: FPGA: Recv ZSGSRD 31004
17-03-18 03:39:35.774 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:35.774 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:35.774 -07 000000626 INF: FPGA: Recv ZSGSRD 31002
17-03-18 03:39:35.784 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:35.784 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:35.784 -07 000000444 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:39:35.794 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:35.794 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:35.794 -07 000000438 INF: FPGA: Recv ZSGSRD 31010
17-03-18 03:39:35.804 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:35.804 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:35.804 -07 000000606 INF: FPGA: Recv ZSGSRD 31006
17-03-18 03:39:35.814 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:35.814 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:35.814 -07 000000626 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:39:35.824 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:35.824 -07 000000585 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:35.824 -07 000000591 INF: FPGA: Recv ZPIEZORD 26465
17-03-18 03:39:35.834 -07 000000585 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:35.834 -07 000000585 INF: Z Motor: Piezo is near 36.5 V (nominally 0 to 100 V), expect near 46.5 V, since DAC is at 4.650 V. Piezo Error = -10.0 V.
17-03-18 03:39:35.834 -07 000000585 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.5 um, Read 10 ADC samples: Avg = 31006 (-138.7 uncal um), Error = 0.8 uncal um, Median = 31006 (-138.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 31002 (-138.7 uncal um), Max = 31010 (-138.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:39:35.834 -07 000000585 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31006, posNoise = 4, negNoise = 4
17-03-18 03:39:35.834 -07 000000585 INF: Z Motor: After move to -0.139510, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:35.834 -07 000000585 INF: Z Motor: Settle wait time = 4564 ms, measure time = 108 ms (allowed 150 ms), total time = 4672 ms
17-03-18 03:39:35.834 -07 000000585 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:35.884 -07 000000585 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4725 ms
17-03-18 03:39:35.884 -07 000000585 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:35.884 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:35.884 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:35.884 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:35.884 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:35.884 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:39:35.884 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:35.884 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:39:35.884 -07 000000444 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:39:35.914 -07 000000444 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 24 ms.
17-03-18 03:39:35.914 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:39:35.914 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:39:35.914 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:39:35.934 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:39:35.934 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 44 ms.
17-03-18 03:39:35.934 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:39:35.974 -07 000000585 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:39:36.274 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:39:36.274 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:39:36.274 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:39:36.284 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) start.
17-03-18 03:39:36.314 -07 000000611 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:39:36.314 -07 000000585 INF: FPGA: Recv CAMSNAP
17-03-18 03:39:36.314 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall
17-03-18 03:39:36.404 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) end. Duration was 124 ms.
17-03-18 03:39:36.404 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:36.404 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:39:36.404 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 127 ms.
17-03-18 03:39:36.514 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:39:36.514 -07 000000611 INF: Image SNR check: start
17-03-18 03:39:36.514 -07 000000585 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:39:36.524 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:36.524 -07 000000444 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:39:36.534 -07 000000611 INF: Image SNR check: pass  [peak (Max-Min)=135.10]
17-03-18 03:39:36.534 -07 000000611 INF: Autofocus start
17-03-18 03:39:36.534 -07 000000611 INF: MeasureProfile start
17-03-18 03:39:36.544 -07 000000611 INF: MeasureProfile done
17-03-18 03:39:36.544 -07 000000611 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:39:36.544 -07 000000611 INF: Autofocus finished
17-03-18 03:39:36.594 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:36.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:36.724 -07 000000585 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:39:36.724 -07 000000444 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:39:36.734 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.9111328125, Z-position -0.139512473678575. ----------
17-03-18 03:39:36.734 -07 000000610 INF: Cycle	115	Tile	1	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:36.734 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28983, sync = True, waitForSettling = True)
17-03-18 03:39:36.734 -07 000000610 INF: Z Motor: Moving to -0.132676 mm, started at -0.139512 mm, distance = 6.84 um
17-03-18 03:39:36.734 -07 000000610 INF: FPGA: Xmit ZDACW 28983\n [Z Motor]
17-03-18 03:39:36.734 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:39:36.744 -07 000000610 INF: FPGA: 'ZDACW 28983' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:39:36.744 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:36.744 -07 000000444 INF: FPGA: Recv ZDACR 28983
17-03-18 03:39:36.754 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:36.754 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:36.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:36.904 -07 000000626 INF: FPGA: Recv ZSGSRD 29946
17-03-18 03:39:36.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:36.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:36.914 -07 000000585 INF: FPGA: Recv ZSGSRD 29937
17-03-18 03:39:36.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:36.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:36.924 -07 000000626 INF: FPGA: Recv ZSGSRD 29939
17-03-18 03:39:36.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:36.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:36.934 -07 000000501 INF: FPGA: Recv ZSGSRD 29941
17-03-18 03:39:36.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:36.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:36.944 -07 000000591 INF: FPGA: Recv ZSGSRD 29942
17-03-18 03:39:36.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:36.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:36.954 -07 000000606 INF: FPGA: Recv ZSGSRD 29941
17-03-18 03:39:36.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:36.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:36.964 -07 000000438 INF: FPGA: Recv ZSGSRD 29943
17-03-18 03:39:36.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:36.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:36.974 -07 000000444 INF: FPGA: Recv ZSGSRD 29947
17-03-18 03:39:36.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:36.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:36.984 -07 000000591 INF: FPGA: Recv ZSGSRD 29942
17-03-18 03:39:36.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:36.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:36.994 -07 000000626 INF: FPGA: Recv ZSGSRD 29941
17-03-18 03:39:37.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:37.004 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:37.004 -07 000000606 INF: FPGA: Recv ZPIEZORD 25354
17-03-18 03:39:37.014 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:37.014 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.423 V. Piezo Error = -10.1 V.
17-03-18 03:39:37.014 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29942 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29942 (-131.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29937 (-131.9 uncal um), Max = 29947 (-131.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:39:37.014 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29942, posNoise = 5, negNoise = 5
17-03-18 03:39:37.014 -07 000000610 INF: Z Motor: After move to -0.132676, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:37.014 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:39:37.014 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:37.014 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:37.014 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:37.014 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:37.014 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:37.014 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:37.014 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:39:37.014 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:37.014 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:37.014 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:37.014 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:37.014 -07 000000444 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:39:37.024 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:39:37.024 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:37.034 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:39:37.034 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:39:37.044 -07 000000444 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-18 03:39:37.044 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:37.044 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:39:37.044 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:37.054 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:39:37.054 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 34 ms.
17-03-18 03:39:37.054 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 29160 150\n [Camera]
17-03-18 03:39:37.254 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:37.664 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:37.664 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:37.664 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:37.664 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:37.664 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) start.
17-03-18 03:39:37.804 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:37.804 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:37.804 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:37.814 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:37.814 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) start.
17-03-18 03:39:37.854 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29160 793
17-03-18 03:39:38.004 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:38.054 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) end. Duration was 390 ms.
17-03-18 03:39:38.054 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:39:38.054 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:38.054 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:38.054 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:39:38.184 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:39:38.184 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:39:38.184 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:38.184 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:38.194 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:39:38.194 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:38.204 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:38.204 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:38.204 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:38.204 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:39:38.204 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:38.204 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:38.204 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:38.204 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:38.204 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) start.
17-03-18 03:39:38.394 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:39:38.394 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:38.394 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 29160 150' command took 2 ms to send, 1331 ms to get response, and 1338 ms overall
17-03-18 03:39:38.394 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.133152
17-03-18 03:39:38.394 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13315 mm
17-03-18 03:39:38.394 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:38.394 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:39:38.394 -07 000000626 INF: Y Motor: Moving to 60.7426 mm, started at 59.9111 mm, delta = 0.8315 mm
17-03-18 03:39:38.394 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:38.394 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 29087, sync = True, waitForSettling = False)
17-03-18 03:39:38.394 -07 000000438 INF: Z Motor: Moving to -0.133152 mm, started at -0.132677 mm, distance = -0.47 um
17-03-18 03:39:38.404 -07 000000438 INF: FPGA: Xmit ZDACW 29087\n [Z Motor]
17-03-18 03:39:38.404 -07 000000606 INF: FPGA: Recv YRDPOS 122698
17-03-18 03:39:38.404 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:39:38.404 -07 000000626 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:38.404 -07 000000626 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:38.404 -07 000000626 INF: Y Motor: Moving 1330 steps2
17-03-18 03:39:38.404 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:39:38.414 -07 000000438 INF: FPGA: 'ZDACW 29087' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:38.414 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:38.424 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:38.424 -07 000000606 INF: FPGA: Recv ZDACR 29087
17-03-18 03:39:38.434 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:39:38.434 -07 000000438 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:39:38.584 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:39:38.584 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:39:38.584 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:38.584 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:39:38.584 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:39:38.594 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:38.594 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:38.594 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:39:38.594 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:39:38.594 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:39:38.784 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:39:38.784 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 03:39:38.824 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:38.824 -07 000000585 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:39:38.834 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:38.834 -07 000000626 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:38.834 -07 000000626 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:39:38.834 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.831 mm, average velocity = 2.154 mm/sec
17-03-18 03:39:39.234 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.989471,
17-03-18 03:39:39.784 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:39.784 -07 000000591 INF: FPGA: Recv YRDPOS 124382
17-03-18 03:39:39.794 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:39.794 -07 000000626 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:39.814 -07 000000626 INF: Y Motor: After move to 60.742607, error = -0.009209, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:39.814 -07 000000626 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:39:39.814 -07 000000626 INF: Y Motor: Moved to 60.7334 after 1420 ms (table move)
17-03-18 03:39:39.824 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133152 mm (DAC = 29087)
17-03-18 03:39:39.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:39.824 -07 000000438 INF: FPGA: Recv ZSGSRD 30026
17-03-18 03:39:39.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:39:39.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:39.834 -07 000000606 INF: FPGA: Recv ZSGSRD 30015
17-03-18 03:39:39.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:39.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:39.844 -07 000000438 INF: FPGA: Recv ZSGSRD 30020
17-03-18 03:39:39.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:39.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:39.854 -07 000000606 INF: FPGA: Recv ZSGSRD 30019
17-03-18 03:39:39.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:39.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:39.864 -07 000000606 INF: FPGA: Recv ZSGSRD 30016
17-03-18 03:39:39.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:39.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:39.874 -07 000000606 INF: FPGA: Recv ZSGSRD 30017
17-03-18 03:39:39.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:39.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:39.884 -07 000000626 INF: FPGA: Recv ZSGSRD 30020
17-03-18 03:39:39.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:39.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:39.894 -07 000000626 INF: FPGA: Recv ZSGSRD 30018
17-03-18 03:39:39.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:39.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:39.904 -07 000000626 INF: FPGA: Recv ZSGSRD 30012
17-03-18 03:39:39.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:39.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:39.914 -07 000000438 INF: FPGA: Recv ZSGSRD 30011
17-03-18 03:39:39.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:39.924 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:39.924 -07 000000438 INF: FPGA: Recv ZPIEZORD 25517
17-03-18 03:39:39.934 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:39.934 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.438 V. Piezo Error = -9.9 V.
17-03-18 03:39:39.934 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.2 um, Read 10 ADC samples: Avg = 30017 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30018 (-132.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30011 (-132.3 uncal um), Max = 30026 (-132.4 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:39:39.934 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30017, posNoise = 9, negNoise = 6
17-03-18 03:39:39.934 -07 000000610 INF: Z Motor: After move to -0.133152, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:39.934 -07 000000610 INF: Z Motor: Settle wait time = 1423 ms, measure time = 108 ms (allowed 150 ms), total time = 1531 ms
17-03-18 03:39:39.934 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:39.984 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-18 03:39:39.984 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:39.984 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.7333984375, Z-position -0.133158927870374. ----------
17-03-18 03:39:39.984 -07 000000610 INF: Cycle	115	Tile	2	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:39.984 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28910, sync = True, waitForSettling = True)
17-03-18 03:39:39.984 -07 000000610 INF: Z Motor: Moving to -0.132341 mm, started at -0.133159 mm, distance = 0.82 um
17-03-18 03:39:39.984 -07 000000610 INF: FPGA: Xmit ZDACW 28910\n [Z Motor]
17-03-18 03:39:39.984 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:39:39.994 -07 000000610 INF: FPGA: 'ZDACW 28910' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:39.994 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:39.994 -07 000000606 INF: FPGA: Recv ZDACR 28910
17-03-18 03:39:40.004 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:40.004 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:40.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:40.154 -07 000000591 INF: FPGA: Recv ZSGSRD 29898
17-03-18 03:39:40.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:40.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:40.164 -07 000000606 INF: FPGA: Recv ZSGSRD 29894
17-03-18 03:39:40.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:40.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:40.174 -07 000000626 INF: FPGA: Recv ZSGSRD 29895
17-03-18 03:39:40.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:40.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:40.184 -07 000000438 INF: FPGA: Recv ZSGSRD 29885
17-03-18 03:39:40.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:40.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:40.194 -07 000000438 INF: FPGA: Recv ZSGSRD 29897
17-03-18 03:39:40.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:40.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:40.204 -07 000000626 INF: FPGA: Recv ZSGSRD 29891
17-03-18 03:39:40.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:40.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:40.214 -07 000000438 INF: FPGA: Recv ZSGSRD 29889
17-03-18 03:39:40.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:40.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:40.224 -07 000000626 INF: FPGA: Recv ZSGSRD 29893
17-03-18 03:39:40.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:40.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:40.234 -07 000000626 INF: FPGA: Recv ZSGSRD 29893
17-03-18 03:39:40.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:40.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:40.244 -07 000000438 INF: FPGA: Recv ZSGSRD 29893
17-03-18 03:39:40.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:40.254 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:40.254 -07 000000626 INF: FPGA: Recv ZPIEZORD 25334
17-03-18 03:39:40.264 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:40.264 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.411 V. Piezo Error = -10.0 V.
17-03-18 03:39:40.264 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29893 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29893 (-131.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29885 (-131.5 uncal um), Max = 29898 (-131.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:39:40.264 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29893, posNoise = 5, negNoise = 8
17-03-18 03:39:40.264 -07 000000610 INF: Z Motor: After move to -0.132341, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:40.264 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:39:40.264 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:40.264 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:40.264 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:40.264 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:40.264 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:40.264 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:40.264 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:40.264 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:40.264 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:40.264 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:40.264 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:40.264 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:40.264 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:39:40.264 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:40.274 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:39:40.274 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:40.284 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:39:40.284 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:39:40.284 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:39:40.284 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:39:40.284 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 29087 150\n [Camera]
17-03-18 03:39:40.484 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:40.894 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:40.894 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:40.894 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:40.894 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:40.894 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:39:40.894 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:40.894 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:40.904 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:40.904 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:40.904 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:39:41.084 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29087 793
17-03-18 03:39:41.234 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:41.294 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 03:39:41.294 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:39:41.294 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:41.304 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 03:39:41.304 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:39:41.304 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:41.304 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:41.304 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:39:41.304 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:41.314 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 03:39:41.434 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:41.434 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:41.434 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:41.434 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:41.434 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:39:41.434 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:41.434 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:41.434 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:41.434 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:41.434 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:39:41.594 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:41.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:41.624 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:39:41.624 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:41.624 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 29087 150' command took 2 ms to send, 1327 ms to get response, and 1338 ms overall
17-03-18 03:39:41.744 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.133061
17-03-18 03:39:41.744 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13306 mm
17-03-18 03:39:41.744 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:41.744 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:39:41.744 -07 000000444 INF: Y Motor: Moving to 61.5726 mm, started at 60.7334 mm, delta = 0.8392 mm
17-03-18 03:39:41.744 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:41.744 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 29067, sync = True, waitForSettling = False)
17-03-18 03:39:41.744 -07 000000626 INF: Z Motor: Moving to -0.133060 mm, started at -0.132362 mm, distance = -0.70 um
17-03-18 03:39:41.754 -07 000000626 INF: FPGA: Xmit ZDACW 29067\n [Z Motor]
17-03-18 03:39:41.754 -07 000000502 INF: FPGA: Recv YRDPOS 124382
17-03-18 03:39:41.754 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:39:41.754 -07 000000444 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:41.754 -07 000000444 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:41.754 -07 000000444 INF: Y Motor: Moving 1343 steps-20
17-03-18 03:39:41.754 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:39:41.764 -07 000000626 INF: FPGA: 'ZDACW 29067' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:41.764 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:41.764 -07 000000424 INF: FPGA: Recv ZDACR 29067
17-03-18 03:39:41.774 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:41.774 -07 000000626 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 03:39:41.774 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:41.824 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:39:41.824 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:39:41.824 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:41.824 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:39:41.824 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:39:41.824 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:41.834 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:41.834 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:41.834 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:39:41.834 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:39:42.144 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:39:42.144 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-18 03:39:42.194 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:42.194 -07 000000591 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:39:42.204 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:42.204 -07 000000444 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:42.204 -07 000000444 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:39:42.204 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.839 mm, average velocity = 2.119 mm/sec
17-03-18 03:39:43.154 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:43.154 -07 000000626 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:39:43.164 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:43.164 -07 000000444 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:43.184 -07 000000444 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:43.184 -07 000000444 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:39:43.184 -07 000000444 INF: Y Motor: Moved to 61.5640 after 1440 ms (table move)
17-03-18 03:39:43.194 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133060 mm (DAC = 29067)
17-03-18 03:39:43.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.194 -07 000000444 INF: FPGA: Recv ZSGSRD 30002
17-03-18 03:39:43.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:39:43.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.204 -07 000000444 INF: FPGA: Recv ZSGSRD 30003
17-03-18 03:39:43.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.214 -07 000000585 INF: FPGA: Recv ZSGSRD 29993
17-03-18 03:39:43.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.224 -07 000000611 INF: FPGA: Recv ZSGSRD 30009
17-03-18 03:39:43.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.234 -07 000000611 INF: FPGA: Recv ZSGSRD 30006
17-03-18 03:39:43.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.244 -07 000000438 INF: FPGA: Recv ZSGSRD 29999
17-03-18 03:39:43.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.254 -07 000000626 INF: FPGA: Recv ZSGSRD 30006
17-03-18 03:39:43.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:39:43.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.264 -07 000000424 INF: FPGA: Recv ZSGSRD 30003
17-03-18 03:39:43.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.274 -07 000000626 INF: FPGA: Recv ZSGSRD 30000
17-03-18 03:39:43.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.284 -07 000000585 INF: FPGA: Recv ZSGSRD 30006
17-03-18 03:39:43.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.294 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:43.294 -07 000000585 INF: FPGA: Recv ZPIEZORD 25535
17-03-18 03:39:43.304 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.304 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.435 V. Piezo Error = -9.8 V.
17-03-18 03:39:43.304 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30003 (-132.3 uncal um), Error = 0.8 uncal um, Median = 30003 (-132.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29993 (-132.2 uncal um), Max = 30009 (-132.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:39:43.304 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30003, posNoise = 6, negNoise = 10
17-03-18 03:39:43.304 -07 000000610 INF: Z Motor: After move to -0.133060, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:43.304 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 108 ms (allowed 150 ms), total time = 1550 ms
17-03-18 03:39:43.304 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:43.354 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 03:39:43.354 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:43.354 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.133068988900389. ----------
17-03-18 03:39:43.354 -07 000000610 INF: Cycle	115	Tile	3	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:43.354 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28890, sync = True, waitForSettling = True)
17-03-18 03:39:43.354 -07 000000610 INF: Z Motor: Moving to -0.132250 mm, started at -0.133069 mm, distance = 0.82 um
17-03-18 03:39:43.354 -07 000000610 INF: FPGA: Xmit ZDACW 28890\n [Z Motor]
17-03-18 03:39:43.354 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:39:43.364 -07 000000610 INF: FPGA: 'ZDACW 28890' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:43.364 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:43.364 -07 000000438 INF: FPGA: Recv ZDACR 28890
17-03-18 03:39:43.374 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.374 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:43.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.524 -07 000000444 INF: FPGA: Recv ZSGSRD 29880
17-03-18 03:39:43.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.534 -07 000000444 INF: FPGA: Recv ZSGSRD 29877
17-03-18 03:39:43.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.544 -07 000000438 INF: FPGA: Recv ZSGSRD 29883
17-03-18 03:39:43.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.554 -07 000000611 INF: FPGA: Recv ZSGSRD 29873
17-03-18 03:39:43.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.564 -07 000000444 INF: FPGA: Recv ZSGSRD 29877
17-03-18 03:39:43.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.574 -07 000000438 INF: FPGA: Recv ZSGSRD 29872
17-03-18 03:39:43.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.584 -07 000000502 INF: FPGA: Recv ZSGSRD 29877
17-03-18 03:39:43.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.594 -07 000000626 INF: FPGA: Recv ZSGSRD 29879
17-03-18 03:39:43.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.604 -07 000000626 INF: FPGA: Recv ZSGSRD 29878
17-03-18 03:39:43.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:43.614 -07 000000606 INF: FPGA: Recv ZSGSRD 29876
17-03-18 03:39:43.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.624 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:43.624 -07 000000438 INF: FPGA: Recv ZPIEZORD 25371
17-03-18 03:39:43.634 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:43.634 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.408 V. Piezo Error = -9.9 V.
17-03-18 03:39:43.634 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29877 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29877 (-131.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29872 (-131.4 uncal um), Max = 29883 (-131.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:39:43.634 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29877, posNoise = 6, negNoise = 5
17-03-18 03:39:43.634 -07 000000610 INF: Z Motor: After move to -0.132250, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:43.634 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:39:43.634 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:43.634 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:43.634 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:43.634 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:43.634 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:43.634 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:43.634 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:43.634 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:43.634 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:43.634 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:43.634 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:43.634 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:43.634 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:39:43.644 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:43.644 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:39:43.644 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:43.654 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:39:43.654 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:39:43.654 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:39:43.654 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:39:43.654 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 29067 150\n [Camera]
17-03-18 03:39:43.854 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:44.264 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:44.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:44.264 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:44.274 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:44.274 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:44.274 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:44.274 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:44.274 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:39:44.284 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:44.284 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:39:44.464 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29067 793
17-03-18 03:39:44.604 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.958108,
17-03-18 03:39:44.614 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:44.654 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:39:44.654 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:39:44.654 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:44.654 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:39:44.654 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:39:44.654 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:44.654 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:39:44.654 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:39:44.654 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:39:44.664 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:39:44.804 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:44.804 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:44.804 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:44.814 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:44.814 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:44.814 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:44.814 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:44.814 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) start.
17-03-18 03:39:44.814 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:44.814 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:39:44.994 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:39:44.994 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:44.994 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 29067 150' command took 4 ms to send, 1329 ms to get response, and 1341 ms overall
17-03-18 03:39:45.004 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:39:45.004 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56396484375, Z-Position -0.132259538170527. ------
17-03-18 03:39:45.004 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:39:45.004 -07 000000585 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13865 mm
17-03-18 03:39:45.004 -07 000000585 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:45.004 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:39:45.004 -07 000000502 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 03:39:45.014 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:45.014 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:39:45.014 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:45.014 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 30289, sync = True, waitForSettling = False)
17-03-18 03:39:45.014 -07 000000611 INF: Z Motor: Moving to -0.138654 mm, started at -0.132260 mm, distance = -6.39 um
17-03-18 03:39:45.014 -07 000000461 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:39:45.024 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:45.024 -07 000000502 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:45.024 -07 000000502 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:45.024 -07 000000502 INF: Y Motor: Moving 1342 steps-18
17-03-18 03:39:45.024 -07 000000611 INF: FPGA: Xmit ZDACW 30289\n [Z Motor]
17-03-18 03:39:45.024 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:39:45.034 -07 000000606 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:39:45.034 -07 000000611 INF: FPGA: 'ZDACW 30289' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:39:45.044 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:45.054 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:45.054 -07 000000626 INF: FPGA: Recv ZDACR 30289
17-03-18 03:39:45.064 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:39:45.064 -07 000000611 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-18 03:39:45.194 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:39:45.194 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:39:45.194 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:45.194 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:39:45.194 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:39:45.194 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:45.194 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:39:45.194 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:39:45.194 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:39:45.204 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:39:45.234 -07 000000626 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:39:45.234 -07 000000606 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:39:45.414 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:39:45.414 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:39:45.464 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:45.464 -07 000000611 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:39:45.474 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:39:45.474 -07 000000502 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:45.474 -07 000000502 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:39:45.474 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.112 mm/sec
17-03-18 03:39:46.424 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:46.424 -07 000000461 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:39:46.434 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:46.434 -07 000000502 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:46.454 -07 000000502 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:46.454 -07 000000502 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:39:46.454 -07 000000502 INF: Y Motor: Moved to 62.3955 after 1448 ms (table move)
17-03-18 03:39:46.464 -07 000000585 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138654 mm (DAC = 30289)
17-03-18 03:39:46.464 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:46.464 -07 000000502 INF: FPGA: Recv ZSGSRD 30883
17-03-18 03:39:46.474 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:39:46.474 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:46.474 -07 000000502 INF: FPGA: Recv ZSGSRD 30875
17-03-18 03:39:46.484 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:46.484 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:46.484 -07 000000502 INF: FPGA: Recv ZSGSRD 30875
17-03-18 03:39:46.494 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:46.494 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:46.494 -07 000000502 INF: FPGA: Recv ZSGSRD 30874
17-03-18 03:39:46.504 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:46.504 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:46.504 -07 000000502 INF: FPGA: Recv ZSGSRD 30876
17-03-18 03:39:46.514 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:46.514 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:46.514 -07 000000424 INF: FPGA: Recv ZSGSRD 30875
17-03-18 03:39:46.524 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:46.524 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:46.524 -07 000000502 INF: FPGA: Recv ZSGSRD 30872
17-03-18 03:39:46.534 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:46.534 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:46.534 -07 000000424 INF: FPGA: Recv ZSGSRD 30871
17-03-18 03:39:46.544 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:46.544 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:46.544 -07 000000424 INF: FPGA: Recv ZSGSRD 30874
17-03-18 03:39:46.554 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:46.554 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:46.554 -07 000000424 INF: FPGA: Recv ZSGSRD 30878
17-03-18 03:39:46.564 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:46.564 -07 000000585 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:46.564 -07 000000424 INF: FPGA: Recv ZPIEZORD 26666
17-03-18 03:39:46.574 -07 000000585 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:46.574 -07 000000585 INF: Z Motor: Piezo is near 37.0 V (nominally 0 to 100 V), expect near 46.2 V, since DAC is at 4.622 V. Piezo Error = -9.3 V.
17-03-18 03:39:46.574 -07 000000585 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.7 um, Read 10 ADC samples: Avg = 30875 (-137.9 uncal um), Error = 0.8 uncal um, Median = 30875 (-137.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30871 (-137.8 uncal um), Max = 30883 (-137.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:39:46.574 -07 000000585 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30875, posNoise = 8, negNoise = 4
17-03-18 03:39:46.574 -07 000000585 INF: Z Motor: After move to -0.138654, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:46.574 -07 000000585 INF: Z Motor: Settle wait time = 1451 ms, measure time = 108 ms (allowed 150 ms), total time = 1559 ms
17-03-18 03:39:46.574 -07 000000585 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:46.594 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:46.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:46.624 -07 000000585 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:39:46.624 -07 000000585 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:46.624 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:46.624 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:46.624 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:46.624 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:46.624 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:39:46.624 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:46.624 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:46.624 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:39:46.634 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:39:46.634 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:39:46.644 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:39:46.644 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 03:39:46.644 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:39:46.694 -07 000000611 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:39:46.994 -07 000000611 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:39:46.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:39:46.994 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:39:46.994 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) start.
17-03-18 03:39:47.034 -07 000000438 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:39:47.034 -07 000000611 INF: FPGA: Recv CAMSNAP
17-03-18 03:39:47.034 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 384 ms overall
17-03-18 03:39:47.124 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:39:47.124 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:47.124 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:39:47.124 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-18 03:39:47.134 -07 000000502 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:39:47.134 -07 000000444 INF: Autofocus start
17-03-18 03:39:47.134 -07 000000444 INF: MeasureProfile start
17-03-18 03:39:47.134 -07 000000606 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:39:47.144 -07 000000502 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:39:47.144 -07 000000502 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:39:47.144 -07 000000444 INF: MeasureProfile done
17-03-18 03:39:47.144 -07 000000444 INF: X=16  Z correction [um]=0.0530179
17-03-18 03:39:47.144 -07 000000444 INF: Autofocus finished
17-03-18 03:39:47.344 -07 000000611 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:39:47.344 -07 000000502 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:39:47.344 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.138670901888005. ----------
17-03-18 03:39:47.344 -07 000000610 INF: Cycle	115	Tile	4	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:47.354 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28813, sync = True, waitForSettling = True)
17-03-18 03:39:47.354 -07 000000610 INF: Z Motor: Moving to -0.131897 mm, started at -0.138671 mm, distance = 6.77 um
17-03-18 03:39:47.354 -07 000000610 INF: FPGA: Xmit ZDACW 28813\n [Z Motor]
17-03-18 03:39:47.354 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 03:39:47.364 -07 000000610 INF: FPGA: 'ZDACW 28813' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:39:47.364 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:47.364 -07 000000461 INF: FPGA: Recv ZDACR 28813
17-03-18 03:39:47.374 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.374 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:47.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:47.524 -07 000000461 INF: FPGA: Recv ZSGSRD 29822
17-03-18 03:39:47.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:47.534 -07 000000461 INF: FPGA: Recv ZSGSRD 29822
17-03-18 03:39:47.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:47.544 -07 000000461 INF: FPGA: Recv ZSGSRD 29828
17-03-18 03:39:47.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:47.554 -07 000000461 INF: FPGA: Recv ZSGSRD 29819
17-03-18 03:39:47.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:47.564 -07 000000461 INF: FPGA: Recv ZSGSRD 29821
17-03-18 03:39:47.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:47.574 -07 000000585 INF: FPGA: Recv ZSGSRD 29821
17-03-18 03:39:47.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:47.584 -07 000000585 INF: FPGA: Recv ZSGSRD 29817
17-03-18 03:39:47.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:47.594 -07 000000585 INF: FPGA: Recv ZSGSRD 29822
17-03-18 03:39:47.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:47.604 -07 000000585 INF: FPGA: Recv ZSGSRD 29815
17-03-18 03:39:47.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:47.614 -07 000000585 INF: FPGA: Recv ZSGSRD 29816
17-03-18 03:39:47.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.624 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:47.624 -07 000000585 INF: FPGA: Recv ZPIEZORD 25316
17-03-18 03:39:47.634 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:47.634 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.397 V. Piezo Error = -9.9 V.
17-03-18 03:39:47.634 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29820 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29821 (-131.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29815 (-131.1 uncal um), Max = 29828 (-131.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:39:47.634 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29820, posNoise = 8, negNoise = 5
17-03-18 03:39:47.634 -07 000000610 INF: Z Motor: After move to -0.131897, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:47.634 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:39:47.634 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:47.634 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:47.634 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:47.634 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:47.634 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:47.634 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:47.634 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:47.634 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:47.634 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:47.634 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:47.634 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:47.634 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:47.644 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:39:47.644 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:47.644 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:39:47.644 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:47.654 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:39:47.654 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:39:47.654 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:39:47.654 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:39:47.654 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28990 150\n [Camera]
17-03-18 03:39:47.854 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:48.264 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:48.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:48.264 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:48.264 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:48.264 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) start.
17-03-18 03:39:48.264 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:48.264 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:48.264 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:48.264 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:48.264 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) start.
17-03-18 03:39:48.454 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28990 793
17-03-18 03:39:48.604 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:48.644 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:39:48.644 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:39:48.644 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:48.644 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:48.644 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:39:48.644 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:39:48.644 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:48.644 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:48.654 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:39:48.654 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:39:48.804 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:48.804 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:48.804 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:48.924 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:48.924 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:48.924 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:48.924 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:48.924 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:39:48.924 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:48.924 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:39:48.994 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:39:48.994 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:48.994 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28990 150' command took 2 ms to send, 1331 ms to get response, and 1338 ms overall
17-03-18 03:39:48.994 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.132550
17-03-18 03:39:48.994 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13255 mm
17-03-18 03:39:48.994 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:48.994 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:39:48.994 -07 000000591 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 03:39:48.994 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:48.994 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 28956, sync = True, waitForSettling = False)
17-03-18 03:39:48.994 -07 000000438 INF: Z Motor: Moving to -0.132552 mm, started at -0.131893 mm, distance = -0.66 um
17-03-18 03:39:49.004 -07 000000626 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:39:49.004 -07 000000438 INF: FPGA: Xmit ZDACW 28956\n [Z Motor]
17-03-18 03:39:49.004 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:39:49.004 -07 000000591 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:49.004 -07 000000591 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:49.004 -07 000000591 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:39:49.004 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:39:49.014 -07 000000438 INF: FPGA: 'ZDACW 28956' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:39:49.014 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:49.014 -07 000000611 INF: FPGA: Recv ZDACR 28956
17-03-18 03:39:49.024 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:49.024 -07 000000438 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:39:49.024 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:49.304 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:39:49.304 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:39:49.304 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:49.314 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:49.314 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:39:49.314 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:39:49.314 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:49.314 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:49.314 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 515 ms.
17-03-18 03:39:49.314 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:39:49.394 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 03:39:49.404 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 2 ms to send, 369 ms to get response, and 398 ms overall
17-03-18 03:39:49.444 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:49.454 -07 000000501 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:39:49.454 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:39:49.454 -07 000000591 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:49.454 -07 000000591 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 03:39:49.454 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.837 mm, average velocity = 2.103 mm/sec
17-03-18 03:39:49.974 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.99219,
17-03-18 03:39:50.404 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:50.404 -07 000000606 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:39:50.414 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.414 -07 000000591 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:50.434 -07 000000591 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:50.434 -07 000000591 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:39:50.434 -07 000000591 INF: Y Motor: Moved to 63.2241 after 1442 ms (table move)
17-03-18 03:39:50.444 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132552 mm (DAC = 28956)
17-03-18 03:39:50.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.444 -07 000000585 INF: FPGA: Recv ZSGSRD 29921
17-03-18 03:39:50.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:39:50.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.454 -07 000000591 INF: FPGA: Recv ZSGSRD 29929
17-03-18 03:39:50.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.464 -07 000000438 INF: FPGA: Recv ZSGSRD 29935
17-03-18 03:39:50.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.474 -07 000000591 INF: FPGA: Recv ZSGSRD 29920
17-03-18 03:39:50.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.484 -07 000000591 INF: FPGA: Recv ZSGSRD 29919
17-03-18 03:39:50.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.494 -07 000000591 INF: FPGA: Recv ZSGSRD 29918
17-03-18 03:39:50.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.504 -07 000000591 INF: FPGA: Recv ZSGSRD 29915
17-03-18 03:39:50.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.514 -07 000000461 INF: FPGA: Recv ZSGSRD 29919
17-03-18 03:39:50.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.524 -07 000000444 INF: FPGA: Recv ZSGSRD 29925
17-03-18 03:39:50.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.534 -07 000000444 INF: FPGA: Recv ZSGSRD 29929
17-03-18 03:39:50.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.544 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:50.544 -07 000000444 INF: FPGA: Recv ZPIEZORD 25461
17-03-18 03:39:50.554 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.554 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.418 V. Piezo Error = -9.8 V.
17-03-18 03:39:50.554 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.6 um, Read 10 ADC samples: Avg = 29923 (-131.8 uncal um), Error = 0.8 uncal um, Median = 29920 (-131.8 uncal um), StdDev = 6 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 29915 (-131.7 uncal um), Max = 29935 (-131.8 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:39:50.554 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29923, posNoise = 12, negNoise = 8
17-03-18 03:39:50.554 -07 000000610 INF: Z Motor: After move to -0.132552, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:50.554 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 107 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:39:50.554 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:50.604 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms
17-03-18 03:39:50.604 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:50.604 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.132555051929048. ----------
17-03-18 03:39:50.604 -07 000000610 INF: Cycle	115	Tile	5	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:50.604 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28779, sync = True, waitForSettling = True)
17-03-18 03:39:50.604 -07 000000610 INF: Z Motor: Moving to -0.131742 mm, started at -0.132555 mm, distance = 0.81 um
17-03-18 03:39:50.604 -07 000000610 INF: FPGA: Xmit ZDACW 28779\n [Z Motor]
17-03-18 03:39:50.604 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:39:50.614 -07 000000610 INF: FPGA: 'ZDACW 28779' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:50.614 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:50.614 -07 000000606 INF: FPGA: Recv ZDACR 28779
17-03-18 03:39:50.624 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.624 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:50.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.774 -07 000000606 INF: FPGA: Recv ZSGSRD 29794
17-03-18 03:39:50.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:50.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.784 -07 000000606 INF: FPGA: Recv ZSGSRD 29801
17-03-18 03:39:50.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.794 -07 000000591 INF: FPGA: Recv ZSGSRD 29797
17-03-18 03:39:50.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.804 -07 000000502 INF: FPGA: Recv ZSGSRD 29790
17-03-18 03:39:50.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.814 -07 000000611 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:39:50.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.824 -07 000000444 INF: FPGA: Recv ZSGSRD 29803
17-03-18 03:39:50.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.834 -07 000000611 INF: FPGA: Recv ZSGSRD 29799
17-03-18 03:39:50.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.844 -07 000000611 INF: FPGA: Recv ZSGSRD 29797
17-03-18 03:39:50.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.854 -07 000000501 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:39:50.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:50.864 -07 000000444 INF: FPGA: Recv ZSGSRD 29799
17-03-18 03:39:50.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.874 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:50.874 -07 000000611 INF: FPGA: Recv ZPIEZORD 25272
17-03-18 03:39:50.884 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:50.884 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.391 V. Piezo Error = -9.9 V.
17-03-18 03:39:50.884 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29797 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29797 (-131.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29790 (-130.9 uncal um), Max = 29803 (-131.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:39:50.884 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29797, posNoise = 6, negNoise = 7
17-03-18 03:39:50.884 -07 000000610 INF: Z Motor: After move to -0.131742, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:50.884 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:39:50.884 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:50.884 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:50.884 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:50.884 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:50.884 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:50.884 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:50.884 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:50.884 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:50.884 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:50.884 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:50.884 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:50.884 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:50.894 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 5 ms.
17-03-18 03:39:50.894 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:50.894 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 6 ms.
17-03-18 03:39:50.894 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:50.904 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:39:50.904 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:39:50.904 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:39:50.904 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:39:50.914 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28956 150\n [Camera]
17-03-18 03:39:51.114 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:51.514 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:51.514 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:51.524 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:51.524 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:51.524 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) start.
17-03-18 03:39:51.524 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:51.524 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:51.524 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:51.524 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:51.524 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) start.
17-03-18 03:39:51.594 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:51.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:51.714 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28956 793
17-03-18 03:39:51.864 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:51.894 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:39:51.894 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:39:51.894 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:51.894 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:39:51.894 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:39:51.894 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:51.904 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:39:51.904 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:39:51.904 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:39:51.914 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:39:52.054 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:52.054 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:52.054 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:52.054 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:52.054 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) start.
17-03-18 03:39:52.174 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:52.174 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:52.174 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:52.184 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:52.184 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) start.
17-03-18 03:39:52.244 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:39:52.254 -07 000000461 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:52.254 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28956 150' command took 2 ms to send, 1330 ms to get response, and 1339 ms overall
17-03-18 03:39:52.254 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.132168
17-03-18 03:39:52.254 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13217 mm
17-03-18 03:39:52.254 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:52.254 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:39:52.254 -07 000000606 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 03:39:52.254 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:52.254 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 28872, sync = True, waitForSettling = False)
17-03-18 03:39:52.254 -07 000000438 INF: Z Motor: Moving to -0.132168 mm, started at -0.131746 mm, distance = -0.42 um
17-03-18 03:39:52.254 -07 000000611 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:39:52.264 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:52.264 -07 000000606 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:52.264 -07 000000606 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:52.264 -07 000000606 INF: Y Motor: Moving 1342 steps-17
17-03-18 03:39:52.264 -07 000000438 INF: FPGA: Xmit ZDACW 28872\n [Z Motor]
17-03-18 03:39:52.264 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 03:39:52.274 -07 000000438 INF: FPGA: 'ZDACW 28872' command took 1 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:39:52.274 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:52.274 -07 000000591 INF: FPGA: Recv ZDACR 28872
17-03-18 03:39:52.284 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:52.284 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:52.284 -07 000000438 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 03:39:52.444 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:39:52.444 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:39:52.444 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:52.444 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:52.444 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:39:52.564 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:39:52.564 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:39:52.564 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:52.564 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:52.574 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:39:52.654 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:39:52.654 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:39:52.704 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:52.704 -07 000000444 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:39:52.714 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:52.714 -07 000000606 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:52.714 -07 000000606 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-18 03:39:52.714 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.112 mm/sec
17-03-18 03:39:53.664 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:53.664 -07 000000502 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:39:53.674 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:53.674 -07 000000606 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:53.694 -07 000000606 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:53.694 -07 000000606 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:39:53.694 -07 000000606 INF: Y Motor: Moved to 64.0571 after 1440 ms (table move)
17-03-18 03:39:53.694 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132168 mm (DAC = 28872)
17-03-18 03:39:53.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:53.704 -07 000000626 INF: FPGA: Recv ZSGSRD 29867
17-03-18 03:39:53.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:39:53.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:53.704 -07 000000626 INF: FPGA: Recv ZSGSRD 29862
17-03-18 03:39:53.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:39:53.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:53.714 -07 000000591 INF: FPGA: Recv ZSGSRD 29860
17-03-18 03:39:53.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:53.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:53.724 -07 000000438 INF: FPGA: Recv ZSGSRD 29864
17-03-18 03:39:53.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:53.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:53.734 -07 000000438 INF: FPGA: Recv ZSGSRD 29875
17-03-18 03:39:53.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:53.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:53.744 -07 000000438 INF: FPGA: Recv ZSGSRD 29866
17-03-18 03:39:53.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:53.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:53.754 -07 000000501 INF: FPGA: Recv ZSGSRD 29863
17-03-18 03:39:53.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:53.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:53.764 -07 000000501 INF: FPGA: Recv ZSGSRD 29859
17-03-18 03:39:53.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:53.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:53.774 -07 000000501 INF: FPGA: Recv ZSGSRD 29865
17-03-18 03:39:53.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:53.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:53.784 -07 000000501 INF: FPGA: Recv ZSGSRD 29869
17-03-18 03:39:53.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:53.794 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:53.794 -07 000000501 INF: FPGA: Recv ZPIEZORD 25398
17-03-18 03:39:53.804 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:53.804 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.406 V. Piezo Error = -9.8 V.
17-03-18 03:39:53.804 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29865 (-131.4 uncal um), Error = 0.8 uncal um, Median = 29864 (-131.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29859 (-131.4 uncal um), Max = 29875 (-131.5 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:39:53.804 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29865, posNoise = 10, negNoise = 6
17-03-18 03:39:53.804 -07 000000610 INF: Z Motor: After move to -0.132168, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:53.804 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 104 ms (allowed 150 ms), total time = 1546 ms
17-03-18 03:39:53.804 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:53.854 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-18 03:39:53.854 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:53.854 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.132182447624826. ----------
17-03-18 03:39:53.854 -07 000000610 INF: Cycle	115	Tile	6	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:53.854 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28695, sync = True, waitForSettling = True)
17-03-18 03:39:53.854 -07 000000610 INF: Z Motor: Moving to -0.131357 mm, started at -0.132182 mm, distance = 0.83 um
17-03-18 03:39:53.854 -07 000000610 INF: FPGA: Xmit ZDACW 28695\n [Z Motor]
17-03-18 03:39:53.854 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:39:53.864 -07 000000610 INF: FPGA: 'ZDACW 28695' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:39:53.864 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:53.864 -07 000000461 INF: FPGA: Recv ZDACR 28695
17-03-18 03:39:53.874 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:53.874 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:54.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:54.024 -07 000000444 INF: FPGA: Recv ZSGSRD 29730
17-03-18 03:39:54.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:54.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:54.034 -07 000000444 INF: FPGA: Recv ZSGSRD 29743
17-03-18 03:39:54.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:54.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:54.044 -07 000000444 INF: FPGA: Recv ZSGSRD 29736
17-03-18 03:39:54.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:54.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:54.054 -07 000000438 INF: FPGA: Recv ZSGSRD 29741
17-03-18 03:39:54.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:54.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:54.064 -07 000000611 INF: FPGA: Recv ZSGSRD 29748
17-03-18 03:39:54.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:54.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:54.074 -07 000000611 INF: FPGA: Recv ZSGSRD 29735
17-03-18 03:39:54.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:54.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:54.084 -07 000000611 INF: FPGA: Recv ZSGSRD 29736
17-03-18 03:39:54.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:54.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:54.094 -07 000000444 INF: FPGA: Recv ZSGSRD 29741
17-03-18 03:39:54.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:54.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:54.104 -07 000000461 INF: FPGA: Recv ZSGSRD 29735
17-03-18 03:39:54.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:54.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:54.114 -07 000000606 INF: FPGA: Recv ZSGSRD 29742
17-03-18 03:39:54.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:54.124 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:54.124 -07 000000585 INF: FPGA: Recv ZPIEZORD 25219
17-03-18 03:39:54.134 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:54.134 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.379 V. Piezo Error = -9.9 V.
17-03-18 03:39:54.134 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29739 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29738 (-130.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29730 (-130.5 uncal um), Max = 29748 (-130.6 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:39:54.134 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29739, posNoise = 9, negNoise = 9
17-03-18 03:39:54.134 -07 000000610 INF: Z Motor: After move to -0.131357, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:54.134 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:39:54.134 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:54.134 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:54.134 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:54.134 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:54.134 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:54.134 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:54.134 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:54.134 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:54.134 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:54.134 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:54.134 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:54.134 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:54.144 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:39:54.144 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:54.144 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:39:54.144 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:54.154 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:39:54.154 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:39:54.154 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:39:54.154 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:39:54.154 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28872 150\n [Camera]
17-03-18 03:39:54.354 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:39:54.774 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 604
17-03-18 03:39:54.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 604
17-03-18 03:39:54.774 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:54.774 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 604
17-03-18 03:39:54.774 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 604
17-03-18 03:39:54.774 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:54.774 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:54.774 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:39:54.784 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:54.784 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) start.
17-03-18 03:39:54.964 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28872 793
17-03-18 03:39:55.104 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:39:55.164 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 03:39:55.164 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:39:55.164 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:55.164 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:55.164 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:39:55.164 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:39:55.164 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:55.174 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:39:55.174 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:39:55.174 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:39:55.304 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:55.304 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:55.304 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:55.304 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:55.304 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) start.
17-03-18 03:39:55.304 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:55.314 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:55.314 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:55.314 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:55.314 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:39:55.344 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.973092,
17-03-18 03:39:55.494 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:39:55.494 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:55.494 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28872 150' command took 2 ms to send, 1328 ms to get response, and 1338 ms overall
17-03-18 03:39:55.494 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.131971
17-03-18 03:39:55.504 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13197 mm
17-03-18 03:39:55.504 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:55.504 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:39:55.504 -07 000000611 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 03:39:55.504 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 28829, sync = True, waitForSettling = False)
17-03-18 03:39:55.504 -07 000000461 INF: Z Motor: Moving to -0.131971 mm, started at -0.131373 mm, distance = -0.60 um
17-03-18 03:39:55.504 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:55.504 -07 000000585 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:39:55.514 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:55.514 -07 000000611 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:55.514 -07 000000611 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:55.514 -07 000000611 INF: Y Motor: Moving 1337 steps-11
17-03-18 03:39:55.514 -07 000000461 INF: FPGA: Xmit ZDACW 28829\n [Z Motor]
17-03-18 03:39:55.514 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:39:55.524 -07 000000461 INF: FPGA: 'ZDACW 28829' command took 1 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:39:55.524 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:55.524 -07 000000501 INF: FPGA: Recv ZDACR 28829
17-03-18 03:39:55.534 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:55.534 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:55.534 -07 000000461 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 03:39:55.684 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:39:55.684 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:39:55.684 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:55.694 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:55.694 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:39:55.694 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:39:55.694 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:39:55.694 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:55.694 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:55.704 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:39:55.904 -07 000000585 INF: FPGA: Recv YMVTILE
17-03-18 03:39:55.904 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:39:55.954 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:55.954 -07 000000585 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:39:55.964 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:55.964 -07 000000611 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:55.964 -07 000000611 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:39:55.964 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.835 mm, average velocity = 2.104 mm/sec
17-03-18 03:39:56.594 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:39:56.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:39:56.914 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:56.914 -07 000000591 INF: FPGA: Recv YRDPOS 132873
17-03-18 03:39:56.924 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:56.924 -07 000000611 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:56.944 -07 000000611 INF: Y Motor: After move to 64.892609, error = -0.013214, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:39:56.944 -07 000000611 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:39:56.954 -07 000000611 INF: Y Motor: Moved to 64.8794 after 1444 ms (table move)
17-03-18 03:39:56.954 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131971 mm (DAC = 28829)
17-03-18 03:39:56.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:56.954 -07 000000626 INF: FPGA: Recv ZSGSRD 29837
17-03-18 03:39:56.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:39:56.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:56.964 -07 000000461 INF: FPGA: Recv ZSGSRD 29834
17-03-18 03:39:56.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:56.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:56.974 -07 000000626 INF: FPGA: Recv ZSGSRD 29832
17-03-18 03:39:56.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:56.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:56.984 -07 000000461 INF: FPGA: Recv ZSGSRD 29837
17-03-18 03:39:56.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:56.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:56.994 -07 000000461 INF: FPGA: Recv ZSGSRD 29844
17-03-18 03:39:57.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.004 -07 000000461 INF: FPGA: Recv ZSGSRD 29834
17-03-18 03:39:57.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.014 -07 000000424 INF: FPGA: Recv ZSGSRD 29834
17-03-18 03:39:57.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.024 -07 000000438 INF: FPGA: Recv ZSGSRD 29823
17-03-18 03:39:57.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.034 -07 000000611 INF: FPGA: Recv ZSGSRD 29829
17-03-18 03:39:57.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.044 -07 000000611 INF: FPGA: Recv ZSGSRD 29832
17-03-18 03:39:57.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.054 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:57.054 -07 000000611 INF: FPGA: Recv ZPIEZORD 25387
17-03-18 03:39:57.064 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.064 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.399 V. Piezo Error = -9.8 V.
17-03-18 03:39:57.064 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.0 um, Read 10 ADC samples: Avg = 29834 (-131.2 uncal um), Error = 0.8 uncal um, Median = 29834 (-131.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 29823 (-131.1 uncal um), Max = 29844 (-131.3 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 03:39:57.064 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29834, posNoise = 10, negNoise = 11
17-03-18 03:39:57.064 -07 000000610 INF: Z Motor: After move to -0.131971, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:57.064 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 108 ms (allowed 150 ms), total time = 1554 ms
17-03-18 03:39:57.064 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:39:57.114 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1609 ms
17-03-18 03:39:57.114 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:39:57.114 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87939453125, Z-position -0.131983297048431. ----------
17-03-18 03:39:57.114 -07 000000610 INF: Cycle	115	Tile	7	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:39:57.114 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28652, sync = True, waitForSettling = True)
17-03-18 03:39:57.114 -07 000000610 INF: Z Motor: Moving to -0.131160 mm, started at -0.131983 mm, distance = 0.82 um
17-03-18 03:39:57.114 -07 000000610 INF: FPGA: Xmit ZDACW 28652\n [Z Motor]
17-03-18 03:39:57.124 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:39:57.124 -07 000000610 INF: FPGA: 'ZDACW 28652' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:39:57.124 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:57.124 -07 000000444 INF: FPGA: Recv ZDACR 28652
17-03-18 03:39:57.134 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.134 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:39:57.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.284 -07 000000501 INF: FPGA: Recv ZSGSRD 29703
17-03-18 03:39:57.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:39:57.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.294 -07 000000626 INF: FPGA: Recv ZSGSRD 29715
17-03-18 03:39:57.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.304 -07 000000626 INF: FPGA: Recv ZSGSRD 29706
17-03-18 03:39:57.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.314 -07 000000626 INF: FPGA: Recv ZSGSRD 29705
17-03-18 03:39:57.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.324 -07 000000626 INF: FPGA: Recv ZSGSRD 29707
17-03-18 03:39:57.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.334 -07 000000501 INF: FPGA: Recv ZSGSRD 29702
17-03-18 03:39:57.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.344 -07 000000591 INF: FPGA: Recv ZSGSRD 29712
17-03-18 03:39:57.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.354 -07 000000591 INF: FPGA: Recv ZSGSRD 29701
17-03-18 03:39:57.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.364 -07 000000591 INF: FPGA: Recv ZSGSRD 29707
17-03-18 03:39:57.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:39:57.374 -07 000000501 INF: FPGA: Recv ZSGSRD 29713
17-03-18 03:39:57.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.384 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:39:57.384 -07 000000626 INF: FPGA: Recv ZPIEZORD 25187
17-03-18 03:39:57.394 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:57.394 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.372 V. Piezo Error = -9.9 V.
17-03-18 03:39:57.394 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.2 um, Read 10 ADC samples: Avg = 29707 (-130.4 uncal um), Error = 0.8 uncal um, Median = 29706 (-130.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29701 (-130.3 uncal um), Max = 29715 (-130.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:39:57.394 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29707, posNoise = 8, negNoise = 6
17-03-18 03:39:57.394 -07 000000610 INF: Z Motor: After move to -0.131160, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:39:57.394 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:39:57.394 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:39:57.394 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:39:57.394 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:39:57.394 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:39:57.394 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:39:57.394 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:39:57.394 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:39:57.394 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:39:57.394 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:39:57.394 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:39:57.394 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:39:57.394 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:39:57.404 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:39:57.404 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:39:57.404 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:39:57.404 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:39:57.414 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:39:57.414 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:39:57.414 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:39:57.414 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:39:57.414 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28829 150\n [Camera]
17-03-18 03:39:57.624 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-18 03:39:58.024 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:39:58.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:39:58.024 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:58.024 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:58.024 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 03:39:58.034 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:39:58.034 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:39:58.034 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:58.034 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:58.034 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:39:58.224 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28829 793
17-03-18 03:39:58.374 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 944
17-03-18 03:39:58.424 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 391 ms.
17-03-18 03:39:58.424 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:39:58.424 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:58.424 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 390 ms.
17-03-18 03:39:58.424 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:39:58.424 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:58.424 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:58.424 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:39:58.424 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:58.434 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:39:58.564 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:39:58.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:39:58.574 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:39:58.574 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:39:58.574 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:39:58.574 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:39:58.574 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:39:58.574 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:39:58.574 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:39:58.574 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:39:58.754 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:39:58.754 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:39:58.754 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28829 150' command took 2 ms to send, 1328 ms to get response, and 1338 ms overall
17-03-18 03:39:58.764 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:39:58.764 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87939453125, Z-Position -0.131167422106428. ------
17-03-18 03:39:58.764 -07 000000444 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13780 mm
17-03-18 03:39:58.764 -07 000000444 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:39:58.764 -07 000000502 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:39:58.764 -07 000000611 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:39:58.774 -07 000000502 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:39:58.774 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 30102, sync = True, waitForSettling = False)
17-03-18 03:39:58.774 -07 000000502 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:39:58.774 -07 000000424 INF: Z Motor: Moving to -0.137798 mm, started at -0.131167 mm, distance = -6.63 um
17-03-18 03:39:58.774 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:39:58.774 -07 000000461 INF: Y Motor: Moving to 65.7226 mm, started at 64.8794 mm, delta = 0.8432 mm
17-03-18 03:39:58.784 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:58.784 -07 000000626 INF: FPGA: Recv YRDPOS 132873
17-03-18 03:39:58.794 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:39:58.794 -07 000000461 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:58.794 -07 000000461 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:39:58.794 -07 000000461 INF: Y Motor: Moving 1349 steps-28
17-03-18 03:39:58.794 -07 000000424 INF: FPGA: Xmit ZDACW 30102\n [Z Motor]
17-03-18 03:39:58.794 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:39:58.804 -07 000000424 INF: FPGA: 'ZDACW 30102' command took 1 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:39:58.804 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:39:58.804 -07 000000561 INF: FPGA: Recv ZDACR 30102
17-03-18 03:39:58.814 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:58.814 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:39:58.814 -07 000000424 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 03:39:58.954 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:39:58.954 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:39:58.954 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:58.954 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:39:58.954 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:39:58.954 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:39:58.954 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:58.954 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:39:58.954 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:39:58.964 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:39:58.974 -07 000000424 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:39:58.974 -07 000000502 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:39:59.184 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:39:59.184 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:39:59.244 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:39:59.244 -07 000000611 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:39:59.254 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:39:59.254 -07 000000461 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:39:59.254 -07 000000461 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 03:39:59.254 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.843 mm, average velocity = 2.119 mm/sec
17-03-18 03:40:00.204 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:00.204 -07 000000462 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:40:00.214 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:00.214 -07 000000461 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:00.244 -07 000000461 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:00.244 -07 000000461 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:40:00.244 -07 000000461 INF: Y Motor: Moved to 65.7144 after 1471 ms (table move)
17-03-18 03:40:00.244 -07 000000444 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137798 mm (DAC = 30102)
17-03-18 03:40:00.244 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:00.254 -07 000000462 INF: FPGA: Recv ZSGSRD 30739
17-03-18 03:40:00.254 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:40:00.254 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:00.254 -07 000000461 INF: FPGA: Recv ZSGSRD 30745
17-03-18 03:40:00.264 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:40:00.264 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:00.264 -07 000000591 INF: FPGA: Recv ZSGSRD 30744
17-03-18 03:40:00.274 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:00.274 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:00.274 -07 000000438 INF: FPGA: Recv ZSGSRD 30741
17-03-18 03:40:00.284 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:00.284 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:00.284 -07 000000502 INF: FPGA: Recv ZSGSRD 30743
17-03-18 03:40:00.294 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:00.294 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:00.294 -07 000000455 INF: FPGA: Recv ZSGSRD 30736
17-03-18 03:40:00.304 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:00.304 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:00.304 -07 000000501 INF: FPGA: Recv ZSGSRD 30735
17-03-18 03:40:00.314 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:00.314 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:00.314 -07 000000438 INF: FPGA: Recv ZSGSRD 30744
17-03-18 03:40:00.324 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:00.324 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:00.324 -07 000000512 INF: FPGA: Recv ZSGSRD 30749
17-03-18 03:40:00.334 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:00.334 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:00.334 -07 000000606 INF: FPGA: Recv ZSGSRD 30747
17-03-18 03:40:00.344 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:00.344 -07 000000444 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:00.344 -07 000000591 INF: FPGA: Recv ZPIEZORD 26558
17-03-18 03:40:00.354 -07 000000444 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:00.354 -07 000000444 INF: Z Motor: Piezo is near 36.7 V (nominally 0 to 100 V), expect near 45.9 V, since DAC is at 4.593 V. Piezo Error = -9.2 V.
17-03-18 03:40:00.354 -07 000000444 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.8 um, Read 10 ADC samples: Avg = 30742 (-137.0 uncal um), Error = 0.8 uncal um, Median = 30744 (-137.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30735 (-137.0 uncal um), Max = 30749 (-137.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:40:00.354 -07 000000444 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30742, posNoise = 7, negNoise = 7
17-03-18 03:40:00.354 -07 000000444 INF: Z Motor: After move to -0.137798, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:00.354 -07 000000444 INF: Z Motor: Settle wait time = 1477 ms, measure time = 102 ms (allowed 150 ms), total time = 1579 ms
17-03-18 03:40:00.354 -07 000000444 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:00.404 -07 000000444 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1634 ms
17-03-18 03:40:00.404 -07 000000444 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:00.404 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:00.404 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:00.404 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:00.404 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:00.404 -07 000000585 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:40:00.404 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:00.414 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:40:00.414 -07 000000585 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:40:00.414 -07 000000585 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:40:00.414 -07 000000585 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:40:00.424 -07 000000585 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 8 ms.
17-03-18 03:40:00.424 -07 000000585 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms.
17-03-18 03:40:00.424 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:40:00.474 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 42
17-03-18 03:40:00.724 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.99219,
17-03-18 03:40:00.774 -07 000000424 INF: FPGA: Recv @CAMSNAP img rdy 343
17-03-18 03:40:00.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 343
17-03-18 03:40:00.774 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:40:00.904 -07 000000444 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:40:00.904 -07 000000444 INF: FPGA: Recv CAMSNAP
17-03-18 03:40:00.904 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 470 ms to get response, and 477 ms overall
17-03-18 03:40:00.904 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) start.
17-03-18 03:40:01.024 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) end. Duration was 123 ms.
17-03-18 03:40:01.024 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:01.024 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:40:01.024 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 253 ms.
17-03-18 03:40:01.104 -07 000000424 INF: Autofocus start
17-03-18 03:40:01.104 -07 000000424 INF: MeasureProfile start
17-03-18 03:40:01.104 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:40:01.104 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:40:01.114 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:40:01.114 -07 000000626 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:40:01.124 -07 000000424 INF: MeasureProfile done
17-03-18 03:40:01.124 -07 000000424 INF: X=16  Z correction [um]=0.0530179
17-03-18 03:40:01.124 -07 000000424 INF: Autofocus finished
17-03-18 03:40:01.314 -07 000000462 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:40:01.314 -07 000000626 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:40:01.314 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.13781648167315. ----------
17-03-18 03:40:01.314 -07 000000610 INF: Cycle	115	Tile	8	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:01.324 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28626, sync = True, waitForSettling = True)
17-03-18 03:40:01.324 -07 000000610 INF: Z Motor: Moving to -0.131041 mm, started at -0.137816 mm, distance = 6.78 um
17-03-18 03:40:01.324 -07 000000610 INF: FPGA: Xmit ZDACW 28626\n [Z Motor]
17-03-18 03:40:01.324 -07 000000585 INF: FPGA: Recv ZDACW
17-03-18 03:40:01.334 -07 000000610 INF: FPGA: 'ZDACW 28626' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:40:01.334 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:01.334 -07 000000461 INF: FPGA: Recv ZDACR 28626
17-03-18 03:40:01.344 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:01.344 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:01.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:01.494 -07 000000512 INF: FPGA: Recv ZSGSRD 29687
17-03-18 03:40:01.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:01.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:01.504 -07 000000579 INF: FPGA: Recv ZSGSRD 29693
17-03-18 03:40:01.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:01.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:01.514 -07 000000444 INF: FPGA: Recv ZSGSRD 29689
17-03-18 03:40:01.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:01.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:01.524 -07 000000424 INF: FPGA: Recv ZSGSRD 29689
17-03-18 03:40:01.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:01.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:01.534 -07 000000462 INF: FPGA: Recv ZSGSRD 29694
17-03-18 03:40:01.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:01.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:01.544 -07 000000438 INF: FPGA: Recv ZSGSRD 29685
17-03-18 03:40:01.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:01.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:01.554 -07 000000455 INF: FPGA: Recv ZSGSRD 29686
17-03-18 03:40:01.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:01.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:01.564 -07 000000461 INF: FPGA: Recv ZSGSRD 29687
17-03-18 03:40:01.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:01.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:01.574 -07 000000512 INF: FPGA: Recv ZSGSRD 29688
17-03-18 03:40:01.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:01.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:01.584 -07 000000626 INF: FPGA: Recv ZSGSRD 29687
17-03-18 03:40:01.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:40:01.594 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:01.594 -07 000000462 INF: FPGA: Recv ZPIEZORD 25181
17-03-18 03:40:01.594 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:40:01.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:40:01.604 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:01.604 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.368 V. Piezo Error = -9.9 V.
17-03-18 03:40:01.604 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.0 um, Read 10 ADC samples: Avg = 29688 (-130.3 uncal um), Error = 0.8 uncal um, Median = 29688 (-130.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29685 (-130.2 uncal um), Max = 29694 (-130.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:40:01.604 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29688, posNoise = 6, negNoise = 3
17-03-18 03:40:01.604 -07 000000610 INF: Z Motor: After move to -0.131041, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:01.604 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:40:01.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:01.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:01.604 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:01.604 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:01.604 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:01.604 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:01.604 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:01.604 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:01.604 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:40:01.604 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:01.604 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:01.604 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:01.604 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:40:01.604 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:01.614 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:40:01.614 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:01.614 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:40:01.614 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-18 03:40:01.614 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:40:01.614 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:40:01.624 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28803 150\n [Camera]
17-03-18 03:40:01.824 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:40:02.234 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:02.234 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:02.234 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:02.234 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:02.234 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:40:02.234 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:02.234 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:02.234 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:02.234 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:02.234 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) start.
17-03-18 03:40:02.424 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28803 793
17-03-18 03:40:02.574 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:40:02.614 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:40:02.614 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:40:02.614 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:40:02.614 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:02.614 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:40:02.614 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:02.614 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:02.614 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:40:02.614 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:02.624 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:40:02.774 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1141
17-03-18 03:40:02.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1141
17-03-18 03:40:02.774 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:02.774 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:02.774 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) start.
17-03-18 03:40:02.774 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1141
17-03-18 03:40:02.774 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1141
17-03-18 03:40:02.774 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:02.774 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:02.774 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) start.
17-03-18 03:40:02.964 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:40:02.964 -07 000000585 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:02.964 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28803 150' command took 2 ms to send, 1333 ms to get response, and 1338 ms overall
17-03-18 03:40:02.964 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.131377
17-03-18 03:40:02.964 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13138 mm
17-03-18 03:40:03.084 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:40:03.084 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:40:03.084 -07 000000626 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-18 03:40:03.084 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:03.084 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 28699, sync = True, waitForSettling = False)
17-03-18 03:40:03.084 -07 000000461 INF: Z Motor: Moving to -0.131376 mm, started at -0.131045 mm, distance = -0.33 um
17-03-18 03:40:03.084 -07 000000611 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:40:03.094 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:40:03.094 -07 000000626 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:03.094 -07 000000626 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:40:03.094 -07 000000626 INF: Y Motor: Moving 1341 steps-17
17-03-18 03:40:03.094 -07 000000461 INF: FPGA: Xmit ZDACW 28699\n [Z Motor]
17-03-18 03:40:03.094 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:40:03.104 -07 000000461 INF: FPGA: 'ZDACW 28699' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:40:03.104 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:40:03.114 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:03.114 -07 000000512 INF: FPGA: Recv ZDACR 28699
17-03-18 03:40:03.124 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:40:03.124 -07 000000461 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:40:03.154 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:40:03.154 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:40:03.154 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:03.154 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:40:03.164 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:40:03.164 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:03.164 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:40:03.164 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:40:03.164 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:40:03.174 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:40:03.474 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 03:40:03.474 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:40:03.524 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:03.524 -07 000000512 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:40:03.534 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:40:03.534 -07 000000626 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:03.534 -07 000000626 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:40:03.534 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.838 mm, average velocity = 2.160 mm/sec
17-03-18 03:40:04.484 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:04.484 -07 000000455 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:40:04.494 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:04.494 -07 000000626 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:04.524 -07 000000626 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:04.524 -07 000000626 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:40:04.524 -07 000000626 INF: Y Motor: Moved to 66.5391 after 1438 ms (table move)
17-03-18 03:40:04.524 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131376 mm (DAC = 28699)
17-03-18 03:40:04.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.524 -07 000000502 INF: FPGA: Recv ZSGSRD 29738
17-03-18 03:40:04.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:40:04.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.534 -07 000000585 INF: FPGA: Recv ZSGSRD 29743
17-03-18 03:40:04.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.544 -07 000000444 INF: FPGA: Recv ZSGSRD 29741
17-03-18 03:40:04.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.554 -07 000000438 INF: FPGA: Recv ZSGSRD 29747
17-03-18 03:40:04.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.564 -07 000000502 INF: FPGA: Recv ZSGSRD 29737
17-03-18 03:40:04.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.574 -07 000000461 INF: FPGA: Recv ZSGSRD 29742
17-03-18 03:40:04.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:40:04.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.584 -07 000000585 INF: FPGA: Recv ZSGSRD 29737
17-03-18 03:40:04.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.594 -07 000000462 INF: FPGA: Recv ZSGSRD 29734
17-03-18 03:40:04.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.604 -07 000000424 INF: FPGA: Recv ZSGSRD 29739
17-03-18 03:40:04.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.614 -07 000000591 INF: FPGA: Recv ZSGSRD 29741
17-03-18 03:40:04.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.624 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:04.624 -07 000000561 INF: FPGA: Recv ZPIEZORD 25288
17-03-18 03:40:04.634 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.634 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.379 V. Piezo Error = -9.8 V.
17-03-18 03:40:04.634 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29740 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29740 (-130.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29734 (-130.6 uncal um), Max = 29747 (-130.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:40:04.634 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29740, posNoise = 7, negNoise = 6
17-03-18 03:40:04.634 -07 000000610 INF: Z Motor: After move to -0.131376, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:04.634 -07 000000610 INF: Z Motor: Settle wait time = 1440 ms, measure time = 106 ms (allowed 150 ms), total time = 1546 ms
17-03-18 03:40:04.634 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:04.684 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1714 ms
17-03-18 03:40:04.684 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:04.684 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.131379421107106. ----------
17-03-18 03:40:04.684 -07 000000610 INF: Cycle	115	Tile	9	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:04.684 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28523, sync = True, waitForSettling = True)
17-03-18 03:40:04.684 -07 000000610 INF: Z Motor: Moving to -0.130570 mm, started at -0.131379 mm, distance = 0.81 um
17-03-18 03:40:04.684 -07 000000610 INF: FPGA: Xmit ZDACW 28523\n [Z Motor]
17-03-18 03:40:04.684 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:40:04.694 -07 000000610 INF: FPGA: 'ZDACW 28523' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:40:04.694 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:04.694 -07 000000591 INF: FPGA: Recv ZDACR 28523
17-03-18 03:40:04.704 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.704 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:04.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.854 -07 000000591 INF: FPGA: Recv ZSGSRD 29622
17-03-18 03:40:04.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:04.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.864 -07 000000438 INF: FPGA: Recv ZSGSRD 29619
17-03-18 03:40:04.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.874 -07 000000501 INF: FPGA: Recv ZSGSRD 29610
17-03-18 03:40:04.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.884 -07 000000444 INF: FPGA: Recv ZSGSRD 29616
17-03-18 03:40:04.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.894 -07 000000502 INF: FPGA: Recv ZSGSRD 29619
17-03-18 03:40:04.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.904 -07 000000585 INF: FPGA: Recv ZSGSRD 29613
17-03-18 03:40:04.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.914 -07 000000512 INF: FPGA: Recv ZSGSRD 29615
17-03-18 03:40:04.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.924 -07 000000626 INF: FPGA: Recv ZSGSRD 29613
17-03-18 03:40:04.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.934 -07 000000591 INF: FPGA: Recv ZSGSRD 29617
17-03-18 03:40:04.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:04.944 -07 000000438 INF: FPGA: Recv ZSGSRD 29616
17-03-18 03:40:04.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.954 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:04.954 -07 000000438 INF: FPGA: Recv ZPIEZORD 25092
17-03-18 03:40:04.964 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:04.964 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.352 V. Piezo Error = -9.9 V.
17-03-18 03:40:04.964 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29616 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29616 (-129.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29610 (-129.8 uncal um), Max = 29622 (-129.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:40:04.964 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29616, posNoise = 6, negNoise = 6
17-03-18 03:40:04.964 -07 000000610 INF: Z Motor: After move to -0.130570, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:04.964 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:40:04.964 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:04.964 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:04.964 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:04.964 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:04.964 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:04.964 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:04.964 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:04.964 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:04.964 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:40:04.964 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:04.964 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:04.964 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:04.974 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:40:04.974 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:04.974 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:40:04.974 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:04.984 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 03:40:04.984 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:40:04.984 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:40:04.984 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:40:04.984 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28699 150\n [Camera]
17-03-18 03:40:05.184 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:40:05.594 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:05.594 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:05.594 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:05.594 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:05.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:05.594 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:05.604 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:05.604 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:40:05.604 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:05.604 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) start.
17-03-18 03:40:05.784 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28699 793
17-03-18 03:40:05.934 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:40:05.984 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:40:05.984 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:40:05.984 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:05.984 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:40:05.984 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:40:05.984 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:05.984 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:05.984 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:40:05.994 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:05.994 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:40:06.094 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.005817,
17-03-18 03:40:06.134 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:40:06.134 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:40:06.134 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:06.134 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:06.134 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:40:06.134 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:40:06.134 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:40:06.134 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:06.134 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:06.134 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:40:06.324 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:40:06.324 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:06.324 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28699 150' command took 2 ms to send, 1333 ms to get response, and 1338 ms overall
17-03-18 03:40:06.324 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131490
17-03-18 03:40:06.324 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13149 mm
17-03-18 03:40:06.324 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:40:06.324 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 28724, sync = True, waitForSettling = False)
17-03-18 03:40:06.324 -07 000000579 INF: Z Motor: Moving to -0.131490 mm, started at -0.130583 mm, distance = -0.91 um
17-03-18 03:40:06.324 -07 000000579 INF: FPGA: Xmit ZDACW 28724\n [Z Motor]
17-03-18 03:40:06.334 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:40:06.334 -07 000000501 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-18 03:40:06.334 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:40:06.344 -07 000000579 INF: FPGA: 'ZDACW 28724' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:06.344 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:06.344 -07 000000585 INF: FPGA: Recv ZDACR 28724
17-03-18 03:40:06.354 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:06.354 -07 000000579 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 03:40:06.354 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:06.354 -07 000000626 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:40:06.364 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:40:06.364 -07 000000501 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:06.364 -07 000000501 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:40:06.364 -07 000000501 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:40:06.364 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:40:06.514 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:40:06.514 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:40:06.514 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:06.514 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:40:06.514 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:40:06.514 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:06.514 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:06.514 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:40:06.524 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:06.524 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:40:06.594 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:40:06.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:40:06.734 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:40:06.734 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 03:40:06.784 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:06.794 -07 000000579 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:40:06.794 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:40:06.794 -07 000000501 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:06.794 -07 000000501 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-18 03:40:06.794 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.232 mm/sec
17-03-18 03:40:07.744 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:07.744 -07 000000455 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:40:07.754 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:07.754 -07 000000501 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:07.784 -07 000000501 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:07.784 -07 000000501 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:40:07.784 -07 000000501 INF: Y Motor: Moved to 67.3721 after 1450 ms (table move)
17-03-18 03:40:07.784 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131490 mm (DAC = 28724)
17-03-18 03:40:07.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:07.784 -07 000000461 INF: FPGA: Recv ZSGSRD 29764
17-03-18 03:40:07.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:40:07.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:07.794 -07 000000579 INF: FPGA: Recv ZSGSRD 29764
17-03-18 03:40:07.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:07.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:07.804 -07 000000455 INF: FPGA: Recv ZSGSRD 29762
17-03-18 03:40:07.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:07.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:07.814 -07 000000502 INF: FPGA: Recv ZSGSRD 29757
17-03-18 03:40:07.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:07.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:07.824 -07 000000611 INF: FPGA: Recv ZSGSRD 29759
17-03-18 03:40:07.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:07.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:07.834 -07 000000606 INF: FPGA: Recv ZSGSRD 29753
17-03-18 03:40:07.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:07.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:07.844 -07 000000606 INF: FPGA: Recv ZSGSRD 29765
17-03-18 03:40:07.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:40:07.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:07.854 -07 000000611 INF: FPGA: Recv ZSGSRD 29756
17-03-18 03:40:07.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:07.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:07.864 -07 000000461 INF: FPGA: Recv ZSGSRD 29762
17-03-18 03:40:07.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:07.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:07.874 -07 000000626 INF: FPGA: Recv ZSGSRD 29770
17-03-18 03:40:07.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:07.884 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:07.884 -07 000000591 INF: FPGA: Recv ZPIEZORD 25311
17-03-18 03:40:07.894 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:07.894 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.383 V. Piezo Error = -9.8 V.
17-03-18 03:40:07.894 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.5 um, Read 10 ADC samples: Avg = 29761 (-130.7 uncal um), Error = 0.8 uncal um, Median = 29762 (-130.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29753 (-130.7 uncal um), Max = 29770 (-130.8 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:40:07.894 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29761, posNoise = 9, negNoise = 8
17-03-18 03:40:07.894 -07 000000610 INF: Z Motor: After move to -0.131490, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:07.894 -07 000000610 INF: Z Motor: Settle wait time = 1453 ms, measure time = 108 ms (allowed 150 ms), total time = 1561 ms
17-03-18 03:40:07.894 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:07.944 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:40:07.944 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:07.944 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.131514329562083. ----------
17-03-18 03:40:07.944 -07 000000610 INF: Cycle	115	Tile	10	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:07.944 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28547, sync = True, waitForSettling = True)
17-03-18 03:40:07.944 -07 000000610 INF: Z Motor: Moving to -0.130680 mm, started at -0.131514 mm, distance = 0.83 um
17-03-18 03:40:07.944 -07 000000610 INF: FPGA: Xmit ZDACW 28547\n [Z Motor]
17-03-18 03:40:07.944 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:40:07.954 -07 000000610 INF: FPGA: 'ZDACW 28547' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:40:07.954 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:07.954 -07 000000579 INF: FPGA: Recv ZDACR 28547
17-03-18 03:40:07.964 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:07.964 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:08.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:08.114 -07 000000502 INF: FPGA: Recv ZSGSRD 29636
17-03-18 03:40:08.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:08.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:08.124 -07 000000591 INF: FPGA: Recv ZSGSRD 29644
17-03-18 03:40:08.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:08.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:08.134 -07 000000561 INF: FPGA: Recv ZSGSRD 29622
17-03-18 03:40:08.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:08.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:08.144 -07 000000512 INF: FPGA: Recv ZSGSRD 29631
17-03-18 03:40:08.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:08.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:08.154 -07 000000462 INF: FPGA: Recv ZSGSRD 29631
17-03-18 03:40:08.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:08.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:08.164 -07 000000611 INF: FPGA: Recv ZSGSRD 29635
17-03-18 03:40:08.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:08.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:08.174 -07 000000424 INF: FPGA: Recv ZSGSRD 29637
17-03-18 03:40:08.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:08.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:08.184 -07 000000455 INF: FPGA: Recv ZSGSRD 29628
17-03-18 03:40:08.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:08.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:08.194 -07 000000502 INF: FPGA: Recv ZSGSRD 29641
17-03-18 03:40:08.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:08.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:08.204 -07 000000502 INF: FPGA: Recv ZSGSRD 29633
17-03-18 03:40:08.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:08.214 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:08.214 -07 000000462 INF: FPGA: Recv ZPIEZORD 25139
17-03-18 03:40:08.224 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:08.224 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.356 V. Piezo Error = -9.9 V.
17-03-18 03:40:08.224 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29634 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29634 (-129.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 22 (0.1 uncal um), Min = 29622 (-129.8 uncal um), Max = 29644 (-130.0 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 12 (0.1 uncal um)
17-03-18 03:40:08.224 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29634, posNoise = 10, negNoise = 12
17-03-18 03:40:08.224 -07 000000610 INF: Z Motor: After move to -0.130680, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:08.224 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:40:08.224 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:08.224 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:08.224 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:08.224 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:08.224 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:08.224 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:08.224 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:08.224 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:08.224 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:08.224 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:08.224 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:40:08.224 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:08.224 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:40:08.224 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:08.234 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:40:08.234 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:08.244 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:40:08.244 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:40:08.244 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:40:08.244 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:40:08.244 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28724 150\n [Camera]
17-03-18 03:40:08.444 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:40:08.854 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:08.854 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:08.854 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:08.854 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:08.854 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:40:08.864 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:08.864 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:08.864 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:08.864 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:08.864 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:40:09.054 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28724 793
17-03-18 03:40:09.194 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:40:09.234 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:40:09.234 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:40:09.234 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:09.234 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:40:09.234 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:40:09.234 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:09.244 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:09.244 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:09.244 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:40:09.254 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:40:09.394 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:40:09.394 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:40:09.394 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:09.394 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:09.394 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:40:09.394 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:40:09.394 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:40:09.394 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:09.394 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:09.394 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 03:40:09.584 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:40:09.584 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:09.584 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28724 150' command took 2 ms to send, 1328 ms to get response, and 1339 ms overall
17-03-18 03:40:09.594 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.130962
17-03-18 03:40:09.594 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13096 mm
17-03-18 03:40:09.594 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:40:09.594 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:40:09.594 -07 000000591 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-18 03:40:09.604 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:09.604 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 28609, sync = True, waitForSettling = False)
17-03-18 03:40:09.604 -07 000000626 INF: Z Motor: Moving to -0.130964 mm, started at -0.130698 mm, distance = -0.27 um
17-03-18 03:40:09.604 -07 000000462 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:40:09.614 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:09.614 -07 000000591 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:09.614 -07 000000591 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:40:09.614 -07 000000591 INF: Y Motor: Moving 1345 steps-22
17-03-18 03:40:09.614 -07 000000626 INF: FPGA: Xmit ZDACW 28609\n [Z Motor]
17-03-18 03:40:09.614 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 03:40:09.624 -07 000000626 INF: FPGA: 'ZDACW 28609' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:40:09.624 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:40:09.634 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:09.634 -07 000000462 INF: FPGA: Recv ZDACR 28609
17-03-18 03:40:09.644 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:40:09.644 -07 000000626 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 03:40:09.784 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:40:09.784 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:40:09.784 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:09.784 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:40:09.784 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:40:09.784 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:09.784 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:09.784 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:40:09.794 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:09.794 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:40:09.994 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:40:09.994 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:40:10.054 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:10.054 -07 000000561 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:40:10.064 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:10.064 -07 000000591 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:10.064 -07 000000591 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:40:10.064 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.841 mm, average velocity = 2.166 mm/sec
17-03-18 03:40:11.014 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:11.014 -07 000000512 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:40:11.024 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:11.024 -07 000000591 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:11.044 -07 000000591 INF: Y Motor: After move to 68.212608, error = -0.007530, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:11.044 -07 000000591 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:40:11.044 -07 000000591 INF: Y Motor: Moved to 68.2051 after 1449 ms (table move)
17-03-18 03:40:11.054 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130964 mm (DAC = 28609)
17-03-18 03:40:11.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.054 -07 000000461 INF: FPGA: Recv ZSGSRD 29672
17-03-18 03:40:11.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:40:11.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.064 -07 000000606 INF: FPGA: Recv ZSGSRD 29681
17-03-18 03:40:11.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.074 -07 000000561 INF: FPGA: Recv ZSGSRD 29680
17-03-18 03:40:11.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.084 -07 000000502 INF: FPGA: Recv ZSGSRD 29672
17-03-18 03:40:11.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.094 -07 000000424 INF: FPGA: Recv ZSGSRD 29677
17-03-18 03:40:11.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.104 -07 000000444 INF: FPGA: Recv ZSGSRD 29674
17-03-18 03:40:11.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.114 -07 000000501 INF: FPGA: Recv ZSGSRD 29679
17-03-18 03:40:11.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.124 -07 000000591 INF: FPGA: Recv ZSGSRD 29679
17-03-18 03:40:11.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.144 -07 000000561 INF: FPGA: Recv ZSGSRD 29681
17-03-18 03:40:11.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:40:11.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.154 -07 000000585 INF: FPGA: Recv ZSGSRD 29678
17-03-18 03:40:11.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.164 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:11.164 -07 000000512 INF: FPGA: Recv ZPIEZORD 25183
17-03-18 03:40:11.174 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.174 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.365 V. Piezo Error = -9.9 V.
17-03-18 03:40:11.174 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.0 um, Read 10 ADC samples: Avg = 29677 (-130.2 uncal um), Error = 0.8 uncal um, Median = 29678 (-130.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29672 (-130.2 uncal um), Max = 29681 (-130.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:40:11.174 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29677, posNoise = 4, negNoise = 5
17-03-18 03:40:11.174 -07 000000610 INF: Z Motor: After move to -0.130964, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:11.174 -07 000000610 INF: Z Motor: Settle wait time = 1450 ms, measure time = 119 ms (allowed 150 ms), total time = 1569 ms
17-03-18 03:40:11.174 -07 000000610 INF: Z Motor: Waiting extra 31 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:11.214 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1613 ms
17-03-18 03:40:11.214 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:11.214 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.205078125, Z-position -0.130974695742175. ----------
17-03-18 03:40:11.214 -07 000000610 INF: Cycle	115	Tile	11	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:11.214 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28432, sync = True, waitForSettling = True)
17-03-18 03:40:11.214 -07 000000610 INF: Z Motor: Moving to -0.130153 mm, started at -0.130975 mm, distance = 0.82 um
17-03-18 03:40:11.214 -07 000000610 INF: FPGA: Xmit ZDACW 28432\n [Z Motor]
17-03-18 03:40:11.214 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 03:40:11.224 -07 000000610 INF: FPGA: 'ZDACW 28432' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:40:11.224 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:11.224 -07 000000501 INF: FPGA: Recv ZDACR 28432
17-03-18 03:40:11.234 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.234 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:11.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.384 -07 000000591 INF: FPGA: Recv ZSGSRD 29561
17-03-18 03:40:11.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:11.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.394 -07 000000461 INF: FPGA: Recv ZSGSRD 29552
17-03-18 03:40:11.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.404 -07 000000606 INF: FPGA: Recv ZSGSRD 29548
17-03-18 03:40:11.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.414 -07 000000462 INF: FPGA: Recv ZSGSRD 29550
17-03-18 03:40:11.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.424 -07 000000585 INF: FPGA: Recv ZSGSRD 29546
17-03-18 03:40:11.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.434 -07 000000461 INF: FPGA: Recv ZSGSRD 29554
17-03-18 03:40:11.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.454 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.043918,
17-03-18 03:40:11.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.464 -07 000000585 INF: FPGA: Recv ZSGSRD 29551
17-03-18 03:40:11.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:40:11.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.484 -07 000000579 INF: FPGA: Recv ZSGSRD 29547
17-03-18 03:40:11.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:40:11.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.494 -07 000000461 INF: FPGA: Recv ZSGSRD 29547
17-03-18 03:40:11.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:11.514 -07 000000501 INF: FPGA: Recv ZSGSRD 29551
17-03-18 03:40:11.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:40:11.524 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:11.524 -07 000000502 INF: FPGA: Recv ZPIEZORD 25033
17-03-18 03:40:11.534 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:11.534 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.338 V. Piezo Error = -9.9 V.
17-03-18 03:40:11.534 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.2 um, Read 10 ADC samples: Avg = 29551 (-129.4 uncal um), Error = 0.8 uncal um, Median = 29550 (-129.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29546 (-129.4 uncal um), Max = 29561 (-129.5 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:40:11.534 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29551, posNoise = 10, negNoise = 5
17-03-18 03:40:11.534 -07 000000610 INF: Z Motor: After move to -0.130153, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:11.534 -07 000000610 INF: Z Motor: MoveAbsStepped took 316 ms)
17-03-18 03:40:11.534 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:11.534 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:11.534 -07 000000585 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:11.534 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:11.534 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:11.534 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:11.534 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:11.534 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:11.534 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:11.534 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:11.534 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:40:11.534 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:11.534 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:40:11.534 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:11.544 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:40:11.544 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:11.554 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:40:11.554 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:40:11.554 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:40:11.554 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:40:11.554 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28609 150\n [Camera]
17-03-18 03:40:11.594 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:40:11.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:40:11.754 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:40:12.164 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:12.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:12.164 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:12.164 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:12.164 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:40:12.174 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:12.174 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:12.174 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:12.174 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:12.174 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:40:12.364 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28609 793
17-03-18 03:40:12.504 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:40:12.544 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:40:12.544 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:40:12.544 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:12.544 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:40:12.544 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:40:12.544 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:12.554 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:12.554 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:40:12.554 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:12.564 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:40:12.704 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:40:12.704 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:40:12.704 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:12.704 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:12.704 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:40:12.704 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:40:12.704 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:40:12.714 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:12.714 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:12.714 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 03:40:12.894 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:40:12.894 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:12.894 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28609 150' command took 2 ms to send, 1328 ms to get response, and 1338 ms overall
17-03-18 03:40:12.904 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:40:12.904 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.205078125, Z-Position -0.130165245012313. ------
17-03-18 03:40:12.904 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:40:12.904 -07 000000462 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13687 mm
17-03-18 03:40:12.904 -07 000000462 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:40:12.904 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:40:12.904 -07 000000502 INF: Y Motor: Moving to 69.0426 mm, started at 68.2051 mm, delta = 0.8375 mm
17-03-18 03:40:12.904 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 29899, sync = True, waitForSettling = False)
17-03-18 03:40:12.914 -07 000000626 INF: Z Motor: Moving to -0.136869 mm, started at -0.130165 mm, distance = -6.70 um
17-03-18 03:40:12.914 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:12.914 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:40:12.914 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 4 ms overall
17-03-18 03:40:12.914 -07 000000424 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:40:12.924 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:12.924 -07 000000502 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:12.924 -07 000000502 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:40:12.924 -07 000000502 INF: Y Motor: Moving 1340 steps-15
17-03-18 03:40:12.924 -07 000000626 INF: FPGA: Xmit ZDACW 29899\n [Z Motor]
17-03-18 03:40:12.924 -07 000000585 INF: FPGA: Recv ZDACW
17-03-18 03:40:12.934 -07 000000455 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:40:12.934 -07 000000626 INF: FPGA: 'ZDACW 29899' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:40:12.944 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:40:12.954 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:12.954 -07 000000579 INF: FPGA: Recv ZDACR 29899
17-03-18 03:40:12.964 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:40:12.964 -07 000000626 INF: Z Motor: MoveAbsStepped took 50 ms (did NOT wait for settling yet))
17-03-18 03:40:13.094 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 391 ms.
17-03-18 03:40:13.094 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:40:13.094 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:13.104 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:40:13.104 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:40:13.104 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 395 ms.
17-03-18 03:40:13.104 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:40:13.104 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:13.114 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:40:13.124 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms.
17-03-18 03:40:13.134 -07 000000606 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:40:13.134 -07 000000455 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 221 ms overall
17-03-18 03:40:13.314 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-18 03:40:13.314 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:40:13.364 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:13.364 -07 000000501 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:40:13.374 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:40:13.374 -07 000000502 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:13.374 -07 000000502 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:40:13.374 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.110 mm/sec
17-03-18 03:40:14.324 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:14.324 -07 000000501 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:40:14.334 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:14.334 -07 000000502 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:14.364 -07 000000502 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:14.364 -07 000000502 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:40:14.364 -07 000000502 INF: Y Motor: Moved to 69.0273 after 1452 ms (table move)
17-03-18 03:40:14.364 -07 000000462 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136869 mm (DAC = 29899)
17-03-18 03:40:14.364 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:14.364 -07 000000424 INF: FPGA: Recv ZSGSRD 30591
17-03-18 03:40:14.374 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:40:14.374 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:14.374 -07 000000561 INF: FPGA: Recv ZSGSRD 30590
17-03-18 03:40:14.384 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:14.384 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:14.384 -07 000000606 INF: FPGA: Recv ZSGSRD 30596
17-03-18 03:40:14.394 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:14.394 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:14.394 -07 000000585 INF: FPGA: Recv ZSGSRD 30600
17-03-18 03:40:14.404 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:14.404 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:14.404 -07 000000424 INF: FPGA: Recv ZSGSRD 30594
17-03-18 03:40:14.414 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:14.414 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:14.414 -07 000000561 INF: FPGA: Recv ZSGSRD 30592
17-03-18 03:40:14.424 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:14.424 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:14.424 -07 000000611 INF: FPGA: Recv ZSGSRD 30598
17-03-18 03:40:14.434 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:14.434 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:14.434 -07 000000502 INF: FPGA: Recv ZSGSRD 30592
17-03-18 03:40:14.444 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:14.444 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:14.444 -07 000000461 INF: FPGA: Recv ZSGSRD 30590
17-03-18 03:40:14.454 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:14.454 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:14.454 -07 000000579 INF: FPGA: Recv ZSGSRD 30600
17-03-18 03:40:14.464 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:14.464 -07 000000462 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:14.464 -07 000000424 INF: FPGA: Recv ZPIEZORD 26360
17-03-18 03:40:14.474 -07 000000462 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:14.474 -07 000000462 INF: Z Motor: Piezo is near 36.3 V (nominally 0 to 100 V), expect near 45.6 V, since DAC is at 4.562 V. Piezo Error = -9.3 V.
17-03-18 03:40:14.474 -07 000000462 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.9 um, Read 10 ADC samples: Avg = 30594 (-136.1 uncal um), Error = 0.8 uncal um, Median = 30593 (-136.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30590 (-136.0 uncal um), Max = 30600 (-136.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:40:14.474 -07 000000462 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30594, posNoise = 6, negNoise = 4
17-03-18 03:40:14.474 -07 000000462 INF: Z Motor: After move to -0.136869, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:14.474 -07 000000462 INF: Z Motor: Settle wait time = 1455 ms, measure time = 105 ms (allowed 150 ms), total time = 1560 ms
17-03-18 03:40:14.474 -07 000000462 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:14.524 -07 000000462 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1613 ms
17-03-18 03:40:14.524 -07 000000462 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:14.524 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:14.524 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:14.524 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:14.524 -07 000000611 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:40:14.524 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:14.524 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:14.524 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:40:14.524 -07 000000611 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:40:14.534 -07 000000611 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:40:14.534 -07 000000611 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:40:14.544 -07 000000611 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 03:40:14.544 -07 000000611 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:40:14.544 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:40:14.594 -07 000000512 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:40:14.884 -07 000000424 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:40:14.884 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:40:14.894 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:40:14.894 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) start.
17-03-18 03:40:14.924 -07 000000502 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:40:14.924 -07 000000611 INF: FPGA: Recv CAMSNAP
17-03-18 03:40:14.934 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 379 ms to get response, and 384 ms overall
17-03-18 03:40:15.014 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 03:40:15.014 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:15.024 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:40:15.024 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 03:40:15.034 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:40:15.034 -07 000000444 INF: Autofocus start
17-03-18 03:40:15.034 -07 000000444 INF: MeasureProfile start
17-03-18 03:40:15.034 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:40:15.044 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:40:15.044 -07 000000462 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:40:15.044 -07 000000444 INF: MeasureProfile done
17-03-18 03:40:15.044 -07 000000444 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:40:15.044 -07 000000444 INF: Autofocus finished
17-03-18 03:40:15.244 -07 000000561 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:40:15.244 -07 000000462 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:40:15.244 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.13686569827617. ----------
17-03-18 03:40:15.244 -07 000000610 INF: Cycle	115	Tile	12	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:15.254 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28407, sync = True, waitForSettling = True)
17-03-18 03:40:15.254 -07 000000610 INF: Z Motor: Moving to -0.130039 mm, started at -0.136866 mm, distance = 6.83 um
17-03-18 03:40:15.254 -07 000000610 INF: FPGA: Xmit ZDACW 28407\n [Z Motor]
17-03-18 03:40:15.254 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:40:15.264 -07 000000610 INF: FPGA: 'ZDACW 28407' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.264 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:15.264 -07 000000626 INF: FPGA: Recv ZDACR 28407
17-03-18 03:40:15.274 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.274 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:15.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:15.424 -07 000000462 INF: FPGA: Recv ZSGSRD 29534
17-03-18 03:40:15.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:15.434 -07 000000579 INF: FPGA: Recv ZSGSRD 29535
17-03-18 03:40:15.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:15.444 -07 000000501 INF: FPGA: Recv ZSGSRD 29531
17-03-18 03:40:15.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:15.454 -07 000000502 INF: FPGA: Recv ZSGSRD 29528
17-03-18 03:40:15.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:15.464 -07 000000561 INF: FPGA: Recv ZSGSRD 29533
17-03-18 03:40:15.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:15.474 -07 000000512 INF: FPGA: Recv ZSGSRD 29535
17-03-18 03:40:15.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:15.484 -07 000000501 INF: FPGA: Recv ZSGSRD 29536
17-03-18 03:40:15.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:15.494 -07 000000455 INF: FPGA: Recv ZSGSRD 29538
17-03-18 03:40:15.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:15.504 -07 000000561 INF: FPGA: Recv ZSGSRD 29529
17-03-18 03:40:15.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:15.514 -07 000000462 INF: FPGA: Recv ZSGSRD 29537
17-03-18 03:40:15.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.524 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:15.524 -07 000000424 INF: FPGA: Recv ZPIEZORD 24968
17-03-18 03:40:15.534 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:15.534 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.335 V. Piezo Error = -10.0 V.
17-03-18 03:40:15.534 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.0 um, Read 10 ADC samples: Avg = 29534 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29534 (-129.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29528 (-129.2 uncal um), Max = 29538 (-129.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:40:15.534 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29534, posNoise = 4, negNoise = 6
17-03-18 03:40:15.534 -07 000000610 INF: Z Motor: After move to -0.130039, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:15.534 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:40:15.534 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:15.534 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:15.534 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:15.534 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:15.534 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:15.534 -07 000000585 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:15.534 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:15.534 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:15.534 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:40:15.534 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:15.534 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:15.534 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:15.544 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:40:15.544 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:15.544 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:40:15.544 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:15.544 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:40:15.554 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:40:15.554 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 03:40:15.554 -07 000000585 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:40:15.554 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28584 150\n [Camera]
17-03-18 03:40:15.754 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:40:16.164 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:16.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:16.164 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:16.164 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:16.164 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 03:40:16.164 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:16.164 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:16.164 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:16.164 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:16.164 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 03:40:16.354 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28584 793
17-03-18 03:40:16.504 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:40:16.544 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:40:16.544 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:40:16.544 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:16.544 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:40:16.544 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:40:16.544 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:16.544 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:16.544 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:40:16.544 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:16.554 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:40:16.594 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:40:16.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:40:16.704 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:40:16.704 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:40:16.704 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:16.704 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:16.704 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-18 03:40:16.704 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:40:16.704 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:40:16.704 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:16.704 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:16.704 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-18 03:40:16.874 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.031682,
17-03-18 03:40:16.894 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:40:16.894 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:16.894 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28584 150' command took 2 ms to send, 1327 ms to get response, and 1340 ms overall
17-03-18 03:40:16.894 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.130484
17-03-18 03:40:16.904 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13048 mm
17-03-18 03:40:16.904 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:40:16.904 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:40:16.904 -07 000000455 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-18 03:40:16.904 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 28504, sync = True, waitForSettling = False)
17-03-18 03:40:16.904 -07 000000611 INF: Z Motor: Moving to -0.130483 mm, started at -0.130056 mm, distance = -0.43 um
17-03-18 03:40:16.914 -07 000000611 INF: FPGA: Xmit ZDACW 28504\n [Z Motor]
17-03-18 03:40:16.914 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:40:16.924 -07 000000611 INF: FPGA: 'ZDACW 28504' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:40:16.924 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:16.924 -07 000000461 INF: FPGA: Recv YRDPOS 141369
17-03-18 03:40:16.934 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-18 03:40:16.934 -07 000000455 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:16.934 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:16.934 -07 000000462 INF: FPGA: Recv ZDACR 28504
17-03-18 03:40:16.934 -07 000000455 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:40:16.934 -07 000000455 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:40:16.944 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:40:16.944 -07 000000611 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:40:16.944 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:40:17.084 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:40:17.084 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:40:17.084 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:17.084 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:40:17.084 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:40:17.084 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:17.094 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:17.094 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:40:17.094 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:40:17.104 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:40:17.314 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 03:40:17.314 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-18 03:40:17.364 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:17.374 -07 000000438 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:40:17.374 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:40:17.374 -07 000000455 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:17.374 -07 000000455 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:40:17.374 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.845 mm, average velocity = 2.196 mm/sec
17-03-18 03:40:18.324 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:18.324 -07 000000585 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:40:18.334 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:18.334 -07 000000455 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:18.364 -07 000000455 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:18.364 -07 000000455 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:40:18.364 -07 000000455 INF: Y Motor: Moved to 69.8633 after 1459 ms (table move)
17-03-18 03:40:18.364 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130483 mm (DAC = 28504)
17-03-18 03:40:18.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.364 -07 000000455 INF: FPGA: Recv ZSGSRD 29599
17-03-18 03:40:18.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:40:18.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.374 -07 000000502 INF: FPGA: Recv ZSGSRD 29590
17-03-18 03:40:18.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.384 -07 000000561 INF: FPGA: Recv ZSGSRD 29604
17-03-18 03:40:18.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.394 -07 000000512 INF: FPGA: Recv ZSGSRD 29603
17-03-18 03:40:18.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.404 -07 000000462 INF: FPGA: Recv ZSGSRD 29599
17-03-18 03:40:18.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.414 -07 000000585 INF: FPGA: Recv ZSGSRD 29599
17-03-18 03:40:18.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.424 -07 000000626 INF: FPGA: Recv ZSGSRD 29600
17-03-18 03:40:18.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.434 -07 000000444 INF: FPGA: Recv ZSGSRD 29606
17-03-18 03:40:18.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.444 -07 000000424 INF: FPGA: Recv ZSGSRD 29606
17-03-18 03:40:18.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.454 -07 000000611 INF: FPGA: Recv ZSGSRD 29605
17-03-18 03:40:18.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.464 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:18.464 -07 000000626 INF: FPGA: Recv ZPIEZORD 25133
17-03-18 03:40:18.474 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.474 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.349 V. Piezo Error = -9.8 V.
17-03-18 03:40:18.474 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29601 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29602 (-129.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29590 (-129.6 uncal um), Max = 29606 (-129.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 03:40:18.474 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29601, posNoise = 5, negNoise = 11
17-03-18 03:40:18.474 -07 000000610 INF: Z Motor: After move to -0.130483, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:18.474 -07 000000610 INF: Z Motor: Settle wait time = 1462 ms, measure time = 104 ms (allowed 150 ms), total time = 1566 ms
17-03-18 03:40:18.474 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:18.524 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1620 ms
17-03-18 03:40:18.524 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:18.524 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.130486455619401. ----------
17-03-18 03:40:18.524 -07 000000610 INF: Cycle	115	Tile	13	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:18.524 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28327, sync = True, waitForSettling = True)
17-03-18 03:40:18.524 -07 000000610 INF: Z Motor: Moving to -0.129673 mm, started at -0.130486 mm, distance = 0.81 um
17-03-18 03:40:18.524 -07 000000610 INF: FPGA: Xmit ZDACW 28327\n [Z Motor]
17-03-18 03:40:18.524 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:40:18.534 -07 000000610 INF: FPGA: 'ZDACW 28327' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:40:18.534 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:18.534 -07 000000461 INF: FPGA: Recv ZDACR 28327
17-03-18 03:40:18.544 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.544 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:18.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.694 -07 000000626 INF: FPGA: Recv ZSGSRD 29480
17-03-18 03:40:18.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:18.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.704 -07 000000444 INF: FPGA: Recv ZSGSRD 29483
17-03-18 03:40:18.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.714 -07 000000444 INF: FPGA: Recv ZSGSRD 29481
17-03-18 03:40:18.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:40:18.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.724 -07 000000561 INF: FPGA: Recv ZSGSRD 29476
17-03-18 03:40:18.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.734 -07 000000455 INF: FPGA: Recv ZSGSRD 29469
17-03-18 03:40:18.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.744 -07 000000461 INF: FPGA: Recv ZSGSRD 29478
17-03-18 03:40:18.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.754 -07 000000444 INF: FPGA: Recv ZSGSRD 29478
17-03-18 03:40:18.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.764 -07 000000501 INF: FPGA: Recv ZSGSRD 29472
17-03-18 03:40:18.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.774 -07 000000424 INF: FPGA: Recv ZSGSRD 29466
17-03-18 03:40:18.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:18.784 -07 000000626 INF: FPGA: Recv ZSGSRD 29478
17-03-18 03:40:18.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.794 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:18.794 -07 000000561 INF: FPGA: Recv ZPIEZORD 24953
17-03-18 03:40:18.804 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:18.804 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.322 V. Piezo Error = -9.9 V.
17-03-18 03:40:18.804 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.7 um, Read 10 ADC samples: Avg = 29476 (-128.9 uncal um), Error = 0.8 uncal um, Median = 29478 (-128.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29466 (-128.8 uncal um), Max = 29483 (-129.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:40:18.804 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29476, posNoise = 7, negNoise = 10
17-03-18 03:40:18.804 -07 000000610 INF: Z Motor: After move to -0.129673, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:18.804 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:40:18.804 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:18.804 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:18.804 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:18.804 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:18.804 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:18.804 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:18.804 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:18.804 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:18.804 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:40:18.804 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:18.804 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:18.804 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:18.814 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:40:18.814 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:18.814 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:40:18.814 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:18.824 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:40:18.824 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:40:18.824 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:40:18.824 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:40:18.834 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28504 150\n [Camera]
17-03-18 03:40:19.034 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:40:19.434 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:19.444 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:19.444 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:19.444 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:19.444 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start.
17-03-18 03:40:19.444 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:19.444 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:19.444 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:19.444 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:19.444 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-18 03:40:19.634 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28504 793
17-03-18 03:40:19.784 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:40:19.814 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:40:19.814 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:40:19.814 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:19.814 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:40:19.814 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:40:19.814 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:19.824 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:19.824 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:19.824 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:40:19.834 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:40:19.974 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1140
17-03-18 03:40:19.974 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1140
17-03-18 03:40:19.984 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:19.984 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:19.984 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start.
17-03-18 03:40:19.984 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1140
17-03-18 03:40:19.984 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1140
17-03-18 03:40:19.984 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:19.984 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:19.984 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start.
17-03-18 03:40:20.164 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:40:20.174 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:20.174 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28504 150' command took 2 ms to send, 1330 ms to get response, and 1338 ms overall
17-03-18 03:40:20.174 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.129610
17-03-18 03:40:20.174 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.12961 mm
17-03-18 03:40:20.174 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:40:20.174 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:40:20.174 -07 000000626 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-18 03:40:20.174 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 28313, sync = True, waitForSettling = False)
17-03-18 03:40:20.174 -07 000000606 INF: Z Motor: Moving to -0.129609 mm, started at -0.129683 mm, distance = 0.07 um
17-03-18 03:40:20.174 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:20.184 -07 000000606 INF: FPGA: Xmit ZDACW 28313\n [Z Motor]
17-03-18 03:40:20.184 -07 000000455 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:40:20.184 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:40:20.184 -07 000000626 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:20.184 -07 000000626 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:40:20.184 -07 000000626 INF: Y Motor: Moving 1343 steps-19
17-03-18 03:40:20.184 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:40:20.194 -07 000000606 INF: FPGA: 'ZDACW 28313' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:20.194 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:40:20.204 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:20.204 -07 000000561 INF: FPGA: Recv ZDACR 28313
17-03-18 03:40:20.214 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:40:20.214 -07 000000606 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:40:20.364 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:40:20.364 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:40:20.364 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:20.364 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:40:20.364 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:40:20.364 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:20.374 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:20.374 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:20.374 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:40:20.374 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:40:20.564 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 03:40:20.564 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 03:40:20.614 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:20.624 -07 000000611 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:40:20.624 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:40:20.624 -07 000000626 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:20.624 -07 000000626 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:40:20.624 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.839 mm, average velocity = 2.180 mm/sec
17-03-18 03:40:21.574 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:21.574 -07 000000438 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:40:21.584 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:21.584 -07 000000626 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:21.594 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:40:21.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:40:21.614 -07 000000626 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:21.614 -07 000000626 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:40:21.614 -07 000000626 INF: Y Motor: Moved to 70.6885 after 1431 ms (table move)
17-03-18 03:40:21.614 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129609 mm (DAC = 28313)
17-03-18 03:40:21.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.614 -07 000000585 INF: FPGA: Recv ZSGSRD 29465
17-03-18 03:40:21.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:40:21.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.624 -07 000000461 INF: FPGA: Recv ZSGSRD 29458
17-03-18 03:40:21.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.634 -07 000000502 INF: FPGA: Recv ZSGSRD 29466
17-03-18 03:40:21.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.644 -07 000000626 INF: FPGA: Recv ZSGSRD 29466
17-03-18 03:40:21.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.654 -07 000000585 INF: FPGA: Recv ZSGSRD 29466
17-03-18 03:40:21.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.664 -07 000000501 INF: FPGA: Recv ZSGSRD 29471
17-03-18 03:40:21.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.674 -07 000000512 INF: FPGA: Recv ZSGSRD 29462
17-03-18 03:40:21.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.684 -07 000000611 INF: FPGA: Recv ZSGSRD 29464
17-03-18 03:40:21.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.694 -07 000000502 INF: FPGA: Recv ZSGSRD 29463
17-03-18 03:40:21.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.704 -07 000000579 INF: FPGA: Recv ZSGSRD 29468
17-03-18 03:40:21.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.714 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:21.714 -07 000000512 INF: FPGA: Recv ZPIEZORD 24994
17-03-18 03:40:21.724 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.724 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.320 V. Piezo Error = -9.8 V.
17-03-18 03:40:21.724 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.6 um, Read 10 ADC samples: Avg = 29465 (-128.8 uncal um), Error = 0.8 uncal um, Median = 29466 (-128.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29458 (-128.8 uncal um), Max = 29471 (-128.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:40:21.724 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29465, posNoise = 6, negNoise = 7
17-03-18 03:40:21.724 -07 000000610 INF: Z Motor: After move to -0.129609, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:21.724 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 108 ms (allowed 150 ms), total time = 1541 ms
17-03-18 03:40:21.724 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:21.774 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-18 03:40:21.774 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:21.774 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.129612762768122. ----------
17-03-18 03:40:21.774 -07 000000610 INF: Cycle	115	Tile	14	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:21.774 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28137, sync = True, waitForSettling = True)
17-03-18 03:40:21.774 -07 000000610 INF: Z Motor: Moving to -0.128803 mm, started at -0.129613 mm, distance = 0.81 um
17-03-18 03:40:21.774 -07 000000610 INF: FPGA: Xmit ZDACW 28137\n [Z Motor]
17-03-18 03:40:21.774 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:40:21.784 -07 000000610 INF: FPGA: 'ZDACW 28137' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:40:21.784 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:21.784 -07 000000626 INF: FPGA: Recv ZDACR 28137
17-03-18 03:40:21.794 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.794 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:21.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.944 -07 000000455 INF: FPGA: Recv ZSGSRD 29344
17-03-18 03:40:21.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:21.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.954 -07 000000501 INF: FPGA: Recv ZSGSRD 29340
17-03-18 03:40:21.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.964 -07 000000512 INF: FPGA: Recv ZSGSRD 29341
17-03-18 03:40:21.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.974 -07 000000611 INF: FPGA: Recv ZSGSRD 29337
17-03-18 03:40:21.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.984 -07 000000455 INF: FPGA: Recv ZSGSRD 29344
17-03-18 03:40:21.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:21.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:21.994 -07 000000438 INF: FPGA: Recv ZSGSRD 29341
17-03-18 03:40:22.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:22.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:22.004 -07 000000512 INF: FPGA: Recv ZSGSRD 29340
17-03-18 03:40:22.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:22.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:22.014 -07 000000606 INF: FPGA: Recv ZSGSRD 29344
17-03-18 03:40:22.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:22.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:22.024 -07 000000606 INF: FPGA: Recv ZSGSRD 29334
17-03-18 03:40:22.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:40:22.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:22.034 -07 000000444 INF: FPGA: Recv ZSGSRD 29339
17-03-18 03:40:22.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:22.044 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:22.044 -07 000000462 INF: FPGA: Recv ZPIEZORD 24800
17-03-18 03:40:22.054 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:22.054 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.293 V. Piezo Error = -10.0 V.
17-03-18 03:40:22.054 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29340 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29340 (-128.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29334 (-128.0 uncal um), Max = 29344 (-128.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:40:22.054 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29340, posNoise = 4, negNoise = 6
17-03-18 03:40:22.054 -07 000000610 INF: Z Motor: After move to -0.128803, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:22.054 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:40:22.054 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:22.054 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:22.054 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:22.054 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:22.054 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:22.054 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:22.054 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:22.054 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:22.054 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:22.054 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:22.054 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:40:22.054 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:22.064 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:40:22.064 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:22.064 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:40:22.064 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:22.064 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:40:22.064 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:40:22.064 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:40:22.064 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:40:22.074 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28313 150\n [Camera]
17-03-18 03:40:22.234 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.003063,
17-03-18 03:40:22.274 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:40:22.684 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:22.684 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:22.684 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:22.684 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:22.684 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-18 03:40:22.684 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:22.684 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:22.684 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:22.684 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:22.684 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-18 03:40:22.874 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28313 793
17-03-18 03:40:23.024 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 946
17-03-18 03:40:23.054 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:40:23.054 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:40:23.054 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:23.064 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:40:23.064 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:40:23.064 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:23.064 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:23.064 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:40:23.064 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:23.074 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:40:23.214 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:40:23.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:40:23.224 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:23.224 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:23.224 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) start.
17-03-18 03:40:23.224 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:40:23.224 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:40:23.224 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:23.224 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:23.224 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-18 03:40:23.414 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:40:23.414 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:23.414 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28313 150' command took 2 ms to send, 1331 ms to get response, and 1338 ms overall
17-03-18 03:40:23.414 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.129458
17-03-18 03:40:23.414 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.12946 mm
17-03-18 03:40:23.414 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:40:23.414 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:40:23.414 -07 000000611 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 03:40:23.414 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 28280, sync = True, waitForSettling = False)
17-03-18 03:40:23.414 -07 000000461 INF: Z Motor: Moving to -0.129458 mm, started at -0.128810 mm, distance = -0.65 um
17-03-18 03:40:23.414 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:23.424 -07 000000461 INF: FPGA: Xmit ZDACW 28280\n [Z Motor]
17-03-18 03:40:23.424 -07 000000502 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:40:23.424 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:40:23.424 -07 000000611 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:23.424 -07 000000611 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:40:23.424 -07 000000611 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:40:23.424 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:40:23.434 -07 000000461 INF: FPGA: 'ZDACW 28280' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:40:23.434 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:23.434 -07 000000579 INF: FPGA: Recv ZDACR 28280
17-03-18 03:40:23.444 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:40:23.444 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:23.444 -07 000000461 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:40:23.604 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:40:23.604 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:40:23.604 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:23.604 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:40:23.604 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:40:23.604 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:23.604 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:23.604 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:40:23.604 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:40:23.614 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:40:23.814 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:40:23.814 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall
17-03-18 03:40:23.864 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:23.874 -07 000000444 INF: FPGA: Recv YRDPOS 146470
17-03-18 03:40:23.874 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:40:23.874 -07 000000611 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:23.874 -07 000000611 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:40:23.874 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.844 mm, average velocity = 2.132 mm/sec
17-03-18 03:40:24.824 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:24.824 -07 000000606 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:40:24.834 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:24.834 -07 000000611 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:24.854 -07 000000611 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:24.854 -07 000000611 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:40:24.854 -07 000000611 INF: Y Motor: Moved to 71.5190 after 1441 ms (table move)
17-03-18 03:40:24.864 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129458 mm (DAC = 28280)
17-03-18 03:40:24.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:24.864 -07 000000585 INF: FPGA: Recv ZSGSRD 29444
17-03-18 03:40:24.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:40:24.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:24.874 -07 000000444 INF: FPGA: Recv ZSGSRD 29440
17-03-18 03:40:24.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:24.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:24.884 -07 000000606 INF: FPGA: Recv ZSGSRD 29444
17-03-18 03:40:24.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:24.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:24.894 -07 000000626 INF: FPGA: Recv ZSGSRD 29445
17-03-18 03:40:24.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:24.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:24.904 -07 000000585 INF: FPGA: Recv ZSGSRD 29443
17-03-18 03:40:24.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:24.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:24.914 -07 000000591 INF: FPGA: Recv ZSGSRD 29448
17-03-18 03:40:24.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:24.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:24.924 -07 000000461 INF: FPGA: Recv ZSGSRD 29442
17-03-18 03:40:24.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:24.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:24.934 -07 000000461 INF: FPGA: Recv ZSGSRD 29449
17-03-18 03:40:24.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:40:24.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:24.944 -07 000000606 INF: FPGA: Recv ZSGSRD 29439
17-03-18 03:40:24.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:24.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:24.954 -07 000000585 INF: FPGA: Recv ZSGSRD 29445
17-03-18 03:40:24.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:24.964 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:24.964 -07 000000444 INF: FPGA: Recv ZPIEZORD 24990
17-03-18 03:40:24.974 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:24.974 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.315 V. Piezo Error = -9.8 V.
17-03-18 03:40:24.974 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.5 um, Read 10 ADC samples: Avg = 29444 (-128.7 uncal um), Error = 0.8 uncal um, Median = 29444 (-128.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29439 (-128.7 uncal um), Max = 29449 (-128.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:40:24.974 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29444, posNoise = 5, negNoise = 5
17-03-18 03:40:24.974 -07 000000610 INF: Z Motor: After move to -0.129458, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:24.974 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 108 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:40:24.974 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:25.024 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 03:40:25.024 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:25.024 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.129477854313145. ----------
17-03-18 03:40:25.024 -07 000000610 INF: Cycle	115	Tile	15	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:25.024 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28103, sync = True, waitForSettling = True)
17-03-18 03:40:25.024 -07 000000610 INF: Z Motor: Moving to -0.128647 mm, started at -0.129478 mm, distance = 0.83 um
17-03-18 03:40:25.024 -07 000000610 INF: FPGA: Xmit ZDACW 28103\n [Z Motor]
17-03-18 03:40:25.024 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:40:25.034 -07 000000610 INF: FPGA: 'ZDACW 28103' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:40:25.034 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:25.034 -07 000000585 INF: FPGA: Recv ZDACR 28103
17-03-18 03:40:25.044 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.044 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:25.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:25.194 -07 000000444 INF: FPGA: Recv ZSGSRD 29316
17-03-18 03:40:25.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:25.204 -07 000000461 INF: FPGA: Recv ZSGSRD 29319
17-03-18 03:40:25.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:25.214 -07 000000502 INF: FPGA: Recv ZSGSRD 29319
17-03-18 03:40:25.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:25.224 -07 000000579 INF: FPGA: Recv ZSGSRD 29306
17-03-18 03:40:25.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:25.234 -07 000000444 INF: FPGA: Recv ZSGSRD 29319
17-03-18 03:40:25.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:25.244 -07 000000424 INF: FPGA: Recv ZSGSRD 29321
17-03-18 03:40:25.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:25.254 -07 000000455 INF: FPGA: Recv ZSGSRD 29312
17-03-18 03:40:25.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:25.264 -07 000000611 INF: FPGA: Recv ZSGSRD 29313
17-03-18 03:40:25.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:25.274 -07 000000444 INF: FPGA: Recv ZSGSRD 29319
17-03-18 03:40:25.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:25.284 -07 000000424 INF: FPGA: Recv ZSGSRD 29318
17-03-18 03:40:25.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.294 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:25.294 -07 000000502 INF: FPGA: Recv ZPIEZORD 24790
17-03-18 03:40:25.304 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:25.304 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.288 V. Piezo Error = -9.9 V.
17-03-18 03:40:25.304 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29316 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29318 (-127.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29306 (-127.8 uncal um), Max = 29321 (-127.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:40:25.304 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29316, posNoise = 5, negNoise = 10
17-03-18 03:40:25.304 -07 000000610 INF: Z Motor: After move to -0.128647, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:25.304 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:40:25.304 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:25.304 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:25.304 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:25.304 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:25.304 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:25.304 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:25.304 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:25.304 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:25.304 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:25.304 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:25.304 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:40:25.304 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:25.314 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:40:25.314 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:25.314 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:40:25.314 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:25.324 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:40:25.324 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:40:25.324 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:40:25.324 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:40:25.334 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28280 150\n [Camera]
17-03-18 03:40:25.524 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:40:25.934 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:25.934 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:25.934 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:25.934 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:25.934 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) start.
17-03-18 03:40:25.944 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:25.944 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:25.944 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:26.104 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:26.104 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:40:26.134 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28280 793
17-03-18 03:40:26.284 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:40:26.344 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) end. Duration was 403 ms.
17-03-18 03:40:26.344 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:40:26.344 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:26.344 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:40:26.344 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 03:40:26.464 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 367 ms.
17-03-18 03:40:26.464 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 367 ms.
17-03-18 03:40:26.464 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:26.474 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:40:26.474 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 536 ms.
17-03-18 03:40:26.474 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1141
17-03-18 03:40:26.474 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1141
17-03-18 03:40:26.484 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:26.484 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1142
17-03-18 03:40:26.484 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1142
17-03-18 03:40:26.484 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:26.494 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:26.494 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:40:26.494 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:26.494 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:40:26.594 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:40:26.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:40:26.664 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1332
17-03-18 03:40:26.664 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:26.664 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28280 150' command took 2 ms to send, 1328 ms to get response, and 1338 ms overall
17-03-18 03:40:26.674 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:40:26.674 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51904296875, Z-Position -0.128655555158999. ------
17-03-18 03:40:26.674 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.13499 mm
17-03-18 03:40:26.674 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:40:26.674 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:40:26.674 -07 000000611 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:40:26.684 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 2 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:40:26.684 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:40:26.684 -07 000000561 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-18 03:40:26.684 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 29489, sync = True, waitForSettling = False)
17-03-18 03:40:26.684 -07 000000461 INF: Z Motor: Moving to -0.134992 mm, started at -0.128656 mm, distance = -6.34 um
17-03-18 03:40:26.684 -07 000000606 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:40:26.694 -07 000000461 INF: FPGA: Xmit ZDACW 29489\n [Z Motor]
17-03-18 03:40:26.694 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 03:40:26.704 -07 000000461 INF: FPGA: 'ZDACW 29489' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:40:26.704 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:26.704 -07 000000611 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:40:26.714 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:40:26.714 -07 000000561 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:26.714 -07 000000561 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:40:26.714 -07 000000561 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:40:26.714 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:26.714 -07 000000611 INF: FPGA: Recv ZDACR 29489
17-03-18 03:40:26.724 -07 000000461 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:40:26.724 -07 000000461 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 03:40:26.724 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:40:26.864 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:40:26.864 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:40:26.864 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:26.864 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:40:26.864 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:40:26.864 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:26.874 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:26.874 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:40:26.874 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:26.884 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:40:26.884 -07 000000462 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:40:26.884 -07 000000606 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 194 ms to get response, and 204 ms overall
17-03-18 03:40:27.104 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 03:40:27.104 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 390 ms overall
17-03-18 03:40:27.144 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:27.154 -07 000000626 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:40:27.154 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:40:27.154 -07 000000561 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:27.154 -07 000000561 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 03:40:27.154 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.844 mm, average velocity = 2.163 mm/sec
17-03-18 03:40:27.604 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.986717,
17-03-18 03:40:28.104 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:28.104 -07 000000585 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:40:28.114 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:28.114 -07 000000561 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:28.144 -07 000000561 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:28.144 -07 000000561 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:40:28.144 -07 000000561 INF: Y Motor: Moved to 72.3496 after 1461 ms (table move)
17-03-18 03:40:28.144 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134992 mm (DAC = 29489)
17-03-18 03:40:28.144 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:28.144 -07 000000611 INF: FPGA: Recv ZSGSRD 30306
17-03-18 03:40:28.154 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:40:28.154 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:28.154 -07 000000438 INF: FPGA: Recv ZSGSRD 30302
17-03-18 03:40:28.164 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:28.164 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:28.164 -07 000000512 INF: FPGA: Recv ZSGSRD 30300
17-03-18 03:40:28.174 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:28.174 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:28.174 -07 000000561 INF: FPGA: Recv ZSGSRD 30298
17-03-18 03:40:28.184 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:28.184 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:28.184 -07 000000611 INF: FPGA: Recv ZSGSRD 30304
17-03-18 03:40:28.194 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:28.194 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:28.194 -07 000000591 INF: FPGA: Recv ZSGSRD 30308
17-03-18 03:40:28.204 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:28.204 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:28.204 -07 000000512 INF: FPGA: Recv ZSGSRD 30303
17-03-18 03:40:28.214 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:28.214 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:28.214 -07 000000561 INF: FPGA: Recv ZSGSRD 30302
17-03-18 03:40:28.224 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:28.224 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:28.224 -07 000000611 INF: FPGA: Recv ZSGSRD 30297
17-03-18 03:40:28.234 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:28.234 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:28.234 -07 000000424 INF: FPGA: Recv ZSGSRD 30305
17-03-18 03:40:28.244 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:28.244 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:28.244 -07 000000501 INF: FPGA: Recv ZPIEZORD 26128
17-03-18 03:40:28.254 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:28.254 -07 000000502 INF: Z Motor: Piezo is near 35.8 V (nominally 0 to 100 V), expect near 45.0 V, since DAC is at 4.500 V. Piezo Error = -9.2 V.
17-03-18 03:40:28.254 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.0 um, Read 10 ADC samples: Avg = 30302 (-134.2 uncal um), Error = 0.8 uncal um, Median = 30302 (-134.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30297 (-134.2 uncal um), Max = 30308 (-134.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:40:28.254 -07 000000502 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30302, posNoise = 6, negNoise = 5
17-03-18 03:40:28.254 -07 000000502 INF: Z Motor: After move to -0.134992, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:28.254 -07 000000502 INF: Z Motor: Settle wait time = 1464 ms, measure time = 105 ms (allowed 150 ms), total time = 1569 ms
17-03-18 03:40:28.254 -07 000000502 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:28.304 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1625 ms
17-03-18 03:40:28.304 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:28.304 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:28.304 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:28.304 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:28.304 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:40:28.304 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:28.304 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:28.304 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:40:28.304 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:40:28.314 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:40:28.314 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:40:28.324 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 03:40:28.324 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:40:28.324 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:40:28.364 -07 000000502 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:40:28.664 -07 000000438 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:40:28.664 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:40:28.674 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:40:28.674 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) start.
17-03-18 03:40:28.704 -07 000000579 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:40:28.714 -07 000000626 INF: FPGA: Recv CAMSNAP
17-03-18 03:40:28.714 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 386 ms overall
17-03-18 03:40:28.794 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 611826936, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 03:40:28.794 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:28.794 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:40:28.794 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 03:40:28.814 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:40:28.814 -07 000000611 INF: Autofocus start
17-03-18 03:40:28.814 -07 000000611 INF: MeasureProfile start
17-03-18 03:40:28.814 -07 000000561 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:40:28.824 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:40:28.824 -07 000000501 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:40:28.824 -07 000000611 INF: MeasureProfile done
17-03-18 03:40:28.824 -07 000000611 INF: X=16  Z correction [um]=0.0530179
17-03-18 03:40:28.824 -07 000000611 INF: Autofocus finished
17-03-18 03:40:29.024 -07 000000438 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:40:29.024 -07 000000501 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 196 ms to get response, and 206 ms overall
17-03-18 03:40:29.034 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.134989828330776. ----------
17-03-18 03:40:29.034 -07 000000610 INF: Cycle	115	Tile	16	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:29.034 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28013, sync = True, waitForSettling = True)
17-03-18 03:40:29.034 -07 000000610 INF: Z Motor: Moving to -0.128235 mm, started at -0.134990 mm, distance = 6.75 um
17-03-18 03:40:29.034 -07 000000610 INF: FPGA: Xmit ZDACW 28013\n [Z Motor]
17-03-18 03:40:29.034 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:40:29.044 -07 000000610 INF: FPGA: 'ZDACW 28013' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:40:29.044 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:29.044 -07 000000606 INF: FPGA: Recv ZDACR 28013
17-03-18 03:40:29.054 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:29.054 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:29.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:29.204 -07 000000462 INF: FPGA: Recv ZSGSRD 29257
17-03-18 03:40:29.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:29.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:29.214 -07 000000424 INF: FPGA: Recv ZSGSRD 29254
17-03-18 03:40:29.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:29.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:29.224 -07 000000512 INF: FPGA: Recv ZSGSRD 29248
17-03-18 03:40:29.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:29.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:29.234 -07 000000502 INF: FPGA: Recv ZSGSRD 29251
17-03-18 03:40:29.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:29.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:29.244 -07 000000462 INF: FPGA: Recv ZSGSRD 29251
17-03-18 03:40:29.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:29.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:29.254 -07 000000444 INF: FPGA: Recv ZSGSRD 29255
17-03-18 03:40:29.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:29.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:29.264 -07 000000438 INF: FPGA: Recv ZSGSRD 29252
17-03-18 03:40:29.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:29.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:29.274 -07 000000585 INF: FPGA: Recv ZSGSRD 29247
17-03-18 03:40:29.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:29.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:29.284 -07 000000455 INF: FPGA: Recv ZSGSRD 29259
17-03-18 03:40:29.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:29.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:29.294 -07 000000444 INF: FPGA: Recv ZSGSRD 29248
17-03-18 03:40:29.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:29.304 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:29.304 -07 000000512 INF: FPGA: Recv ZPIEZORD 24735
17-03-18 03:40:29.314 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:29.314 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.275 V. Piezo Error = -9.9 V.
17-03-18 03:40:29.314 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.2 um, Read 10 ADC samples: Avg = 29252 (-127.5 uncal um), Error = 0.8 uncal um, Median = 29252 (-127.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29247 (-127.4 uncal um), Max = 29259 (-127.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:40:29.314 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29252, posNoise = 7, negNoise = 5
17-03-18 03:40:29.314 -07 000000610 INF: Z Motor: After move to -0.128235, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:29.314 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:40:29.314 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:29.314 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:29.314 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:29.314 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:29.314 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:29.314 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:29.314 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:29.314 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:29.314 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:29.314 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:29.314 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:40:29.314 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:29.324 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:40:29.324 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:29.324 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:40:29.324 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:29.324 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:40:29.334 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:40:29.334 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:40:29.334 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:40:29.334 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28190 150\n [Camera]
17-03-18 03:40:29.534 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:40:29.944 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:29.944 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:29.944 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:29.944 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:29.944 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:29.944 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:30.074 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:30.074 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-18 03:40:30.074 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:30.074 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:40:30.134 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28190 793
17-03-18 03:40:30.284 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:40:30.444 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 371 ms.
17-03-18 03:40:30.444 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:40:30.444 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:30.454 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:40:30.454 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 507 ms.
17-03-18 03:40:30.454 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:40:30.454 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:40:30.454 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:30.454 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:40:30.464 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 516 ms.
17-03-18 03:40:30.484 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:40:30.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:40:30.484 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:30.484 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:30.484 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) start.
17-03-18 03:40:30.484 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:40:30.484 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:40:30.484 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:30.484 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:30.484 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) start.
17-03-18 03:40:30.674 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:40:30.674 -07 000000611 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:30.674 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28190 150' command took 4 ms to send, 1334 ms to get response, and 1340 ms overall
17-03-18 03:40:30.674 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.128799
17-03-18 03:40:30.674 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.12880 mm
17-03-18 03:40:30.674 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:40:30.674 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:40:30.674 -07 000000438 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 03:40:30.674 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:30.674 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 28136, sync = True, waitForSettling = False)
17-03-18 03:40:30.674 -07 000000591 INF: Z Motor: Moving to -0.128798 mm, started at -0.128244 mm, distance = -0.55 um
17-03-18 03:40:30.684 -07 000000591 INF: FPGA: Xmit ZDACW 28136\n [Z Motor]
17-03-18 03:40:30.684 -07 000000579 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:40:30.684 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:40:30.684 -07 000000438 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:30.684 -07 000000438 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:40:30.684 -07 000000438 INF: Y Motor: Moving 1349 steps-27
17-03-18 03:40:30.684 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:40:30.694 -07 000000591 INF: FPGA: 'ZDACW 28136' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:30.694 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:30.694 -07 000000611 INF: FPGA: Recv ZDACR 28136
17-03-18 03:40:30.704 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:30.704 -07 000000591 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 03:40:30.704 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:40:30.864 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2204190424, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:40:30.864 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:40:30.864 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:30.864 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2168768160, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:40:30.864 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:40:30.864 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:30.874 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:40:30.874 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:40:30.874 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:40:30.874 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:40:31.074 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:40:31.074 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-18 03:40:31.124 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:31.124 -07 000000579 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:40:31.134 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:40:31.134 -07 000000438 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:31.134 -07 000000438 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 03:40:31.134 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.843 mm, average velocity = 2.140 mm/sec
17-03-18 03:40:31.594 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:40:31.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:40:32.084 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:32.084 -07 000000501 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:40:32.094 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.094 -07 000000438 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:32.114 -07 000000438 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:32.114 -07 000000438 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:40:32.114 -07 000000438 INF: Y Motor: Moved to 73.1763 after 1440 ms (table move)
17-03-18 03:40:32.124 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128798 mm (DAC = 28136)
17-03-18 03:40:32.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.124 -07 000000502 INF: FPGA: Recv ZSGSRD 29335
17-03-18 03:40:32.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:40:32.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.134 -07 000000561 INF: FPGA: Recv ZSGSRD 29340
17-03-18 03:40:32.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.144 -07 000000501 INF: FPGA: Recv ZSGSRD 29339
17-03-18 03:40:32.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.154 -07 000000438 INF: FPGA: Recv ZSGSRD 29345
17-03-18 03:40:32.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.164 -07 000000579 INF: FPGA: Recv ZSGSRD 29348
17-03-18 03:40:32.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.174 -07 000000512 INF: FPGA: Recv ZSGSRD 29342
17-03-18 03:40:32.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.184 -07 000000611 INF: FPGA: Recv ZSGSRD 29336
17-03-18 03:40:32.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.194 -07 000000585 INF: FPGA: Recv ZSGSRD 29337
17-03-18 03:40:32.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.204 -07 000000502 INF: FPGA: Recv ZSGSRD 29341
17-03-18 03:40:32.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.214 -07 000000512 INF: FPGA: Recv ZSGSRD 29337
17-03-18 03:40:32.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.224 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:32.224 -07 000000462 INF: FPGA: Recv ZPIEZORD 24892
17-03-18 03:40:32.234 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.234 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.293 V. Piezo Error = -9.8 V.
17-03-18 03:40:32.234 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29340 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29340 (-128.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29335 (-128.0 uncal um), Max = 29348 (-128.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:40:32.234 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29340, posNoise = 8, negNoise = 5
17-03-18 03:40:32.234 -07 000000610 INF: Z Motor: After move to -0.128798, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:32.234 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 109 ms (allowed 150 ms), total time = 1551 ms
17-03-18 03:40:32.234 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:32.284 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 03:40:32.284 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:32.284 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.128809736250401. ----------
17-03-18 03:40:32.284 -07 000000610 INF: Cycle	115	Tile	17	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:32.284 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27959, sync = True, waitForSettling = True)
17-03-18 03:40:32.284 -07 000000610 INF: Z Motor: Moving to -0.127988 mm, started at -0.128810 mm, distance = 0.82 um
17-03-18 03:40:32.284 -07 000000610 INF: FPGA: Xmit ZDACW 27959\n [Z Motor]
17-03-18 03:40:32.284 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:40:32.294 -07 000000610 INF: FPGA: 'ZDACW 27959' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:40:32.294 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:32.294 -07 000000606 INF: FPGA: Recv ZDACR 27959
17-03-18 03:40:32.304 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.304 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:32.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.454 -07 000000424 INF: FPGA: Recv ZSGSRD 29210
17-03-18 03:40:32.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:32.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.464 -07 000000462 INF: FPGA: Recv ZSGSRD 29221
17-03-18 03:40:32.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.474 -07 000000585 INF: FPGA: Recv ZSGSRD 29210
17-03-18 03:40:32.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.484 -07 000000591 INF: FPGA: Recv ZSGSRD 29219
17-03-18 03:40:32.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.494 -07 000000444 INF: FPGA: Recv ZSGSRD 29213
17-03-18 03:40:32.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.504 -07 000000611 INF: FPGA: Recv ZSGSRD 29213
17-03-18 03:40:32.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.514 -07 000000591 INF: FPGA: Recv ZSGSRD 29209
17-03-18 03:40:32.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.524 -07 000000501 INF: FPGA: Recv ZSGSRD 29208
17-03-18 03:40:32.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.534 -07 000000438 INF: FPGA: Recv ZSGSRD 29217
17-03-18 03:40:32.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:32.544 -07 000000461 INF: FPGA: Recv ZSGSRD 29211
17-03-18 03:40:32.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.554 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:32.554 -07 000000606 INF: FPGA: Recv ZPIEZORD 24738
17-03-18 03:40:32.564 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:32.564 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.266 V. Piezo Error = -9.8 V.
17-03-18 03:40:32.564 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.0 um, Read 10 ADC samples: Avg = 29213 (-127.2 uncal um), Error = 0.8 uncal um, Median = 29212 (-127.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29208 (-127.2 uncal um), Max = 29221 (-127.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:40:32.564 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29213, posNoise = 8, negNoise = 5
17-03-18 03:40:32.564 -07 000000610 INF: Z Motor: After move to -0.127988, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:32.564 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:40:32.564 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:32.564 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:32.564 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:32.564 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:32.564 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:32.564 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:32.564 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:32.564 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:32.564 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:40:32.564 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:32.564 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:32.564 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:32.574 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:40:32.574 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:32.574 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:40:32.574 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:32.584 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:40:32.584 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:40:32.584 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:40:32.584 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:40:32.584 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28136 150\n [Camera]
17-03-18 03:40:32.784 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:40:32.974 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 3.985358,
17-03-18 03:40:33.194 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:33.194 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:33.194 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:33.194 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:33.194 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) start.
17-03-18 03:40:33.194 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:33.194 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:33.194 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:33.194 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:33.194 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) start.
17-03-18 03:40:33.384 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28136 793
17-03-18 03:40:33.534 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:40:33.574 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:40:33.574 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:40:33.574 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:33.574 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2239612688, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:40:33.574 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:40:33.574 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:33.574 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:33.584 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:33.584 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:40:33.584 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:40:33.734 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:40:33.734 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:40:33.734 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:33.734 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:33.734 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) start.
17-03-18 03:40:33.734 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:40:33.734 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:40:33.734 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:33.734 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:33.734 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:40:33.924 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:40:33.924 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:33.924 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28136 150' command took 2 ms to send, 1332 ms to get response, and 1338 ms overall
17-03-18 03:40:33.924 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128344
17-03-18 03:40:33.924 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12834 mm
17-03-18 03:40:33.924 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:40:33.924 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:40:33.924 -07 000000438 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-18 03:40:33.924 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:33.924 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 28037, sync = True, waitForSettling = False)
17-03-18 03:40:33.924 -07 000000606 INF: Z Motor: Moving to -0.128345 mm, started at -0.127994 mm, distance = -0.35 um
17-03-18 03:40:33.934 -07 000000606 INF: FPGA: Xmit ZDACW 28037\n [Z Motor]
17-03-18 03:40:33.934 -07 000000455 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:40:33.934 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:40:34.044 -07 000000585 INF: FPGA: Recv ZDACW
17-03-18 03:40:34.044 -07 000000606 INF: FPGA: 'ZDACW 28037' command took 0 ms to send, 0 ms to get response, and 121 ms overall
17-03-18 03:40:34.054 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:34.054 -07 000000438 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:34.054 -07 000000438 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:40:34.054 -07 000000438 INF: Y Motor: Moving 1354 steps-33
17-03-18 03:40:34.054 -07 000000611 INF: FPGA: Recv ZDACR 28037
17-03-18 03:40:34.064 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:34.064 -07 000000606 INF: Z Motor: MoveAbsStepped took 132 ms (did NOT wait for settling yet))
17-03-18 03:40:34.064 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:40:34.114 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:40:34.114 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:40:34.114 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:34.114 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:40:34.114 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:40:34.114 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:34.124 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:40:34.124 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:40:34.124 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:40:34.134 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:40:34.434 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 03:40:34.434 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:40:34.474 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:34.484 -07 000000461 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:40:34.484 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:40:34.484 -07 000000438 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:34.484 -07 000000438 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:40:34.484 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.846 mm, average velocity = 2.181 mm/sec
17-03-18 03:40:35.434 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:35.434 -07 000000606 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:40:35.444 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:35.444 -07 000000438 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:35.464 -07 000000438 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:35.464 -07 000000438 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:40:35.464 -07 000000438 INF: Y Motor: Moved to 74.0083 after 1534 ms (table move)
17-03-18 03:40:35.464 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128345 mm (DAC = 28037)
17-03-18 03:40:35.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.464 -07 000000626 INF: FPGA: Recv ZSGSRD 29269
17-03-18 03:40:35.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:40:35.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.474 -07 000000455 INF: FPGA: Recv ZSGSRD 29272
17-03-18 03:40:35.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.484 -07 000000461 INF: FPGA: Recv ZSGSRD 29268
17-03-18 03:40:35.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.494 -07 000000462 INF: FPGA: Recv ZSGSRD 29274
17-03-18 03:40:35.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.504 -07 000000467 INF: FPGA: Recv ZSGSRD 29272
17-03-18 03:40:35.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.514 -07 000000455 INF: FPGA: Recv ZSGSRD 29271
17-03-18 03:40:35.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.524 -07 000000424 INF: FPGA: Recv ZSGSRD 29264
17-03-18 03:40:35.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.534 -07 000000438 INF: FPGA: Recv ZSGSRD 29265
17-03-18 03:40:35.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.544 -07 000000579 INF: FPGA: Recv ZSGSRD 29268
17-03-18 03:40:35.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.554 -07 000000501 INF: FPGA: Recv ZSGSRD 29269
17-03-18 03:40:35.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.564 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:35.564 -07 000000467 INF: FPGA: Recv ZPIEZORD 24786
17-03-18 03:40:35.574 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.574 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.278 V. Piezo Error = -9.8 V.
17-03-18 03:40:35.574 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.3 um, Read 10 ADC samples: Avg = 29269 (-127.6 uncal um), Error = 0.8 uncal um, Median = 29269 (-127.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29264 (-127.5 uncal um), Max = 29274 (-127.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:40:35.574 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29269, posNoise = 5, negNoise = 5
17-03-18 03:40:35.574 -07 000000610 INF: Z Motor: After move to -0.128345, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:35.574 -07 000000610 INF: Z Motor: Settle wait time = 1537 ms, measure time = 105 ms (allowed 150 ms), total time = 1642 ms
17-03-18 03:40:35.574 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:35.624 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1695 ms
17-03-18 03:40:35.624 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:35.624 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.128353617188336. ----------
17-03-18 03:40:35.624 -07 000000610 INF: Cycle	115	Tile	18	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:35.624 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27860, sync = True, waitForSettling = True)
17-03-18 03:40:35.624 -07 000000610 INF: Z Motor: Moving to -0.127535 mm, started at -0.128354 mm, distance = 0.82 um
17-03-18 03:40:35.624 -07 000000610 INF: FPGA: Xmit ZDACW 27860\n [Z Motor]
17-03-18 03:40:35.624 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:40:35.634 -07 000000610 INF: FPGA: 'ZDACW 27860' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:40:35.634 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:35.634 -07 000000438 INF: FPGA: Recv ZDACR 27860
17-03-18 03:40:35.644 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.644 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:35.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.794 -07 000000579 INF: FPGA: Recv ZSGSRD 29144
17-03-18 03:40:35.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:35.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.804 -07 000000467 INF: FPGA: Recv ZSGSRD 29149
17-03-18 03:40:35.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.814 -07 000000455 INF: FPGA: Recv ZSGSRD 29143
17-03-18 03:40:35.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.824 -07 000000585 INF: FPGA: Recv ZSGSRD 29143
17-03-18 03:40:35.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.834 -07 000000561 INF: FPGA: Recv ZSGSRD 29146
17-03-18 03:40:35.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.844 -07 000000467 INF: FPGA: Recv ZSGSRD 29149
17-03-18 03:40:35.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.854 -07 000000461 INF: FPGA: Recv ZSGSRD 29138
17-03-18 03:40:35.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.864 -07 000000438 INF: FPGA: Recv ZSGSRD 29136
17-03-18 03:40:35.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.874 -07 000000444 INF: FPGA: Recv ZSGSRD 29145
17-03-18 03:40:35.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:35.884 -07 000000501 INF: FPGA: Recv ZSGSRD 29146
17-03-18 03:40:35.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.894 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:35.894 -07 000000606 INF: FPGA: Recv ZPIEZORD 24635
17-03-18 03:40:35.904 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:35.904 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.251 V. Piezo Error = -9.9 V.
17-03-18 03:40:35.904 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29144 (-126.8 uncal um), Error = 0.8 uncal um, Median = 29144 (-126.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29136 (-126.7 uncal um), Max = 29149 (-126.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:40:35.904 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29144, posNoise = 5, negNoise = 8
17-03-18 03:40:35.904 -07 000000610 INF: Z Motor: After move to -0.127535, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:35.904 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:40:35.904 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:35.904 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:35.904 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:35.904 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:35.904 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:35.904 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:35.904 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:35.904 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:35.904 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:40:35.904 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:35.904 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:35.904 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:35.914 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:40:35.914 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:35.914 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:40:35.914 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:35.924 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:40:35.924 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:40:35.924 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:40:35.924 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:40:35.924 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 28037 150\n [Camera]
17-03-18 03:40:36.124 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-18 03:40:36.534 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:36.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:36.534 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:36.544 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:36.544 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:36.544 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:36.544 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:36.544 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-18 03:40:36.544 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:36.544 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:40:36.594 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:40:36.594 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 114. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1656, R2=1727, Total=3383. Warn if over 250 bubbles per interval.
17-03-18 03:40:36.734 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28037 794
17-03-18 03:40:36.884 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 945
17-03-18 03:40:36.914 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 371 ms.
17-03-18 03:40:36.914 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:40:36.914 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:40:36.914 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:36.914 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 371 ms.
17-03-18 03:40:36.914 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:36.924 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:36.924 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:36.924 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:40:36.934 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:40:37.074 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:40:37.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:40:37.074 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:37.084 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:40:37.084 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:40:37.084 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:37.084 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:37.084 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) start.
17-03-18 03:40:37.084 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:37.084 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) start.
17-03-18 03:40:37.264 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:40:37.264 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:37.264 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 28037 150' command took 2 ms to send, 1327 ms to get response, and 1338 ms overall
17-03-18 03:40:37.274 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.127542
17-03-18 03:40:37.274 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12754 mm
17-03-18 03:40:37.274 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:40:37.274 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:40:37.274 -07 000000444 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 03:40:37.274 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 27862, sync = True, waitForSettling = False)
17-03-18 03:40:37.274 -07 000000501 INF: Z Motor: Moving to -0.127544 mm, started at -0.127551 mm, distance = 0.01 um
17-03-18 03:40:37.274 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:37.284 -07 000000501 INF: FPGA: Xmit ZDACW 27862\n [Z Motor]
17-03-18 03:40:37.284 -07 000000467 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:40:37.284 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 5 ms overall
17-03-18 03:40:37.284 -07 000000444 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:37.284 -07 000000444 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:40:37.284 -07 000000444 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:40:37.284 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:40:37.294 -07 000000501 INF: FPGA: 'ZDACW 27862' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:40:37.294 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:40:37.304 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:37.304 -07 000000611 INF: FPGA: Recv ZDACR 27862
17-03-18 03:40:37.314 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:40:37.314 -07 000000501 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-18 03:40:37.464 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2168768160, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:40:37.464 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:40:37.464 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:37.464 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:40:37.464 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:40:37.464 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:37.474 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:37.474 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:40:37.474 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:40:37.484 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:40:37.664 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 03:40:37.664 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 03:40:37.694 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:37.704 -07 000000591 INF: FPGA: Recv YRDPOS 153255
17-03-18 03:40:37.704 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:40:37.704 -07 000000444 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:37.704 -07 000000444 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-18 03:40:37.704 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.844 mm, average velocity = 2.182 mm/sec
17-03-18 03:40:38.344 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.009895,
17-03-18 03:40:38.674 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:40:38.674 -07 000000585 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:40:38.684 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:40:38.684 -07 000000444 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:40:38.704 -07 000000444 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:40:38.704 -07 000000444 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:40:38.704 -07 000000444 INF: Y Motor: Moved to 74.8320 after 1426 ms (table move)
17-03-18 03:40:38.704 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.127544 mm (DAC = 27862)
17-03-18 03:40:38.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:38.714 -07 000000438 INF: FPGA: Recv ZSGSRD 29140
17-03-18 03:40:38.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:40:38.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:38.724 -07 000000455 INF: FPGA: Recv ZSGSRD 29141
17-03-18 03:40:38.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:38.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:38.734 -07 000000462 INF: FPGA: Recv ZSGSRD 29143
17-03-18 03:40:38.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:38.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:38.744 -07 000000512 INF: FPGA: Recv ZSGSRD 29149
17-03-18 03:40:38.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:38.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:38.754 -07 000000461 INF: FPGA: Recv ZSGSRD 29144
17-03-18 03:40:38.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:38.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:38.764 -07 000000424 INF: FPGA: Recv ZSGSRD 29141
17-03-18 03:40:38.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:38.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:38.774 -07 000000561 INF: FPGA: Recv ZSGSRD 29140
17-03-18 03:40:38.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:38.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:38.784 -07 000000512 INF: FPGA: Recv ZSGSRD 29145
17-03-18 03:40:38.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:38.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:38.794 -07 000000626 INF: FPGA: Recv ZSGSRD 29147
17-03-18 03:40:38.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:38.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:38.804 -07 000000455 INF: FPGA: Recv ZSGSRD 29140
17-03-18 03:40:38.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:38.814 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:38.814 -07 000000501 INF: FPGA: Recv ZPIEZORD 24638
17-03-18 03:40:38.824 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:38.824 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.251 V. Piezo Error = -9.9 V.
17-03-18 03:40:38.824 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29143 (-126.8 uncal um), Error = 0.8 uncal um, Median = 29142 (-126.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29140 (-126.8 uncal um), Max = 29149 (-126.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:40:38.824 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29143, posNoise = 6, negNoise = 3
17-03-18 03:40:38.824 -07 000000610 INF: Z Motor: After move to -0.127544, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:38.824 -07 000000610 INF: Z Motor: Settle wait time = 1428 ms, measure time = 117 ms (allowed 150 ms), total time = 1545 ms
17-03-18 03:40:38.824 -07 000000610 INF: Z Motor: Waiting extra 33 ms after reading position to reach expected total of 150 ms
17-03-18 03:40:38.864 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1588 ms
17-03-18 03:40:38.864 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:40:38.864 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.127544166458475. ----------
17-03-18 03:40:38.864 -07 000000610 INF: Cycle	115	Tile	19	Exposure Settings		A	408	G	196	T	196	C	408
17-03-18 03:40:38.864 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27685, sync = True, waitForSettling = True)
17-03-18 03:40:38.864 -07 000000610 INF: Z Motor: Moving to -0.126734 mm, started at -0.127544 mm, distance = 0.81 um
17-03-18 03:40:38.864 -07 000000610 INF: FPGA: Xmit ZDACW 27685\n [Z Motor]
17-03-18 03:40:38.864 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:40:38.874 -07 000000610 INF: FPGA: 'ZDACW 27685' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:40:38.874 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:40:38.874 -07 000000512 INF: FPGA: Recv ZDACR 27685
17-03-18 03:40:38.884 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:38.884 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:40:39.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:39.034 -07 000000424 INF: FPGA: Recv ZSGSRD 29014
17-03-18 03:40:39.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:40:39.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:39.044 -07 000000501 INF: FPGA: Recv ZSGSRD 29018
17-03-18 03:40:39.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:39.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:39.054 -07 000000591 INF: FPGA: Recv ZSGSRD 29018
17-03-18 03:40:39.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:39.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:39.064 -07 000000512 INF: FPGA: Recv ZSGSRD 29018
17-03-18 03:40:39.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:39.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:39.074 -07 000000455 INF: FPGA: Recv ZSGSRD 29023
17-03-18 03:40:39.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:39.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:39.084 -07 000000579 INF: FPGA: Recv ZSGSRD 29016
17-03-18 03:40:39.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:39.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:39.094 -07 000000611 INF: FPGA: Recv ZSGSRD 29016
17-03-18 03:40:39.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:39.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:39.104 -07 000000626 INF: FPGA: Recv ZSGSRD 29017
17-03-18 03:40:39.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:39.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:39.114 -07 000000444 INF: FPGA: Recv ZSGSRD 29013
17-03-18 03:40:39.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:39.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:40:39.124 -07 000000501 INF: FPGA: Recv ZSGSRD 29017
17-03-18 03:40:39.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:39.134 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:40:39.134 -07 000000585 INF: FPGA: Recv ZPIEZORD 24458
17-03-18 03:40:39.144 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:40:39.144 -07 000000610 INF: Z Motor: Piezo is near 32.2 V (nominally 0 to 100 V), expect near 42.2 V, since DAC is at 4.224 V. Piezo Error = -10.0 V.
17-03-18 03:40:39.144 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.7 um, Read 10 ADC samples: Avg = 29017 (-126.0 uncal um), Error = 0.8 uncal um, Median = 29017 (-126.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29013 (-125.9 uncal um), Max = 29023 (-126.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:40:39.144 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29017, posNoise = 6, negNoise = 4
17-03-18 03:40:39.144 -07 000000610 INF: Z Motor: After move to -0.126734, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:40:39.144 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:40:39.144 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:40:39.144 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:40:39.144 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:40:39.144 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:40:39.144 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:40:39.144 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:40:39.144 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:40:39.144 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:40:39.144 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:40:39.144 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:40:39.144 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:40:39.144 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:40:39.154 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:40:39.154 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:40:39.154 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:40:39.154 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:40:39.164 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:40:39.164 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:40:39.164 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:40:39.164 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:40:39.164 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 408 408 196 196 27862 150\n [Camera]
17-03-18 03:40:39.364 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:40:39.774 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 600
17-03-18 03:40:39.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 600
17-03-18 03:40:39.774 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:39.774 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:39.774 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) start.
17-03-18 03:40:39.784 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 600
17-03-18 03:40:39.784 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 600
17-03-18 03:40:39.784 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:39.784 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:39.784 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) start.
17-03-18 03:40:39.964 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27862 793
17-03-18 03:40:40.114 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 943
17-03-18 03:40:40.154 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2204190424, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:40:40.154 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:40:40.154 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:40.154 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:40:40.154 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:40:40.154 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2239612688, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:40:40.154 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:40:40.154 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:40.164 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:40:40.174 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:40:40.314 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1139
17-03-18 03:40:40.314 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1139
17-03-18 03:40:40.314 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:40:40.314 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:40:40.314 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:40:40.314 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1139
17-03-18 03:40:40.314 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1139
17-03-18 03:40:40.314 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:40:40.314 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:40:40.314 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:40:40.504 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1331
17-03-18 03:40:40.504 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:40:40.504 -07 000000610 INF: FPGA: 'CAMDBLSNAP 408 408 196 196 27862 150' command took 2 ms to send, 1326 ms to get response, and 1338 ms overall
17-03-18 03:40:40.694 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:40:40.704 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:40:40.704 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:40.704 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:40:40.704 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:40:40.714 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 03:40:40.714 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:40:40.714 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:40:40.714 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:40:40.714 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:40:40.714 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:40:40.754 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 41 ms.
17-03-18 03:40:40.754 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:40:40.794 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 03:40:40.934 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-18 03:40:40.934 -07 000000610 INF: Imaging Cycle 115: ScanTilesCommand Cycle 115 time end. Duration was 143207 ms.
17-03-18 03:40:40.934 -07 000000610 INF: =================== Cycle #115 ===================
17-03-18 03:40:40.934 -07 000000610 INF: ===================  ===================
17-03-18 03:40:40.934 -07 000000467 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:40:40.944 -07 000000512 INF: FPGA: Recv EXLED1ADCR 25
17-03-18 03:40:40.944 -07 000000467 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:40:40.944 -07 000000467 INF: GreenLED: Using Green data: Photodiode ADC 25 --> 0.0 mW (old method), or 1.8 mW (new method). Difference = 1.8 mW
17-03-18 03:40:40.944 -07 000000467 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 115, FrontChillerTemperature: 4.009895, FrontChillerHeatSinkTemperature: 0.524301, AmbientTemperature: 18.66918, FlowCellCompartmentTemperature: 21.99255, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.54516, GreenLEDSensorTemperature: 24.8085, PhotodiodePowerAdcGreen: 25, PhotodiodePowerMwGreen: 1.835864
17-03-18 03:40:41.034 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.