17-03-18 04:10:17.314 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:10:17.314 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True) 17-03-18 04:10:17.314 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8320 mm, delta = 0.5485 mm 17-03-18 04:10:17.314 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:10:17.324 -07 000000501 INF: FPGA: Recv YRDPOS 153257 17-03-18 04:10:17.324 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:10:17.324 -07 000000610 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:10:17.324 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False 17-03-18 04:10:17.324 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts 17-03-18 04:10:17.324 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor] 17-03-18 04:10:17.444 -07 000000585 INF: FPGA: Recv YMVTO 154377 872 17-03-18 04:10:17.444 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 111 ms to get response, and 116 ms overall 17-03-18 04:10:17.444 -07 000000610 INF: Y Motor: Position error before settling = -2 encoder counts (-0.001 mm) 17-03-18 04:10:17.444 -07 000000610 INF: Y Motor: To move from 74.833 to 75.381 (0.549 mm) should take 877 steps, but required 872 steps (0.545 mm). Slippage = -0.003 mm (-0.01%). 17-03-18 04:10:17.444 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 116 ms, distance = 0.549 mm, average velocity = 4.729 mm/sec 17-03-18 04:10:18.674 -07 000000479 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.999021, 17-03-18 04:10:20.444 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:10:20.444 -07 000000625 INF: FPGA: Recv YRDPOS 154380 17-03-18 04:10:20.454 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:10:20.454 -07 000000610 INF: Y Motor: Encoder = 154380 = motor step 120609.4 = 75.3809 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:10:20.484 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.000279, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:10:20.484 -07 000000610 INF: Y Motor: Position error after settling = 1 encoder counts (0.000 mm), Delta during settling = 3 counts (0.001 mm) 17-03-18 04:10:20.484 -07 000000610 INF: Y Motor: Moved to 75.3809 after 3169 ms 17-03-18 04:10:20.494 -07 000000610 INF: =================== Cycle #122, Flow Cell Temp 60° =================== 17-03-18 04:10:20.494 -07 000000610 INF: =================== Cycle #122, Flow Cell Temp 60°, FC temperature to 60° =================== 17-03-18 04:10:20.494 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl] 17-03-18 04:10:20.494 -07 000000585 INF: FPGA: Recv TEC2TEMP 17-03-18 04:10:20.504 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:10:20.504 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-18 04:10:20.504 -07 000000474 INF: FPGA: Recv TEC2EN 17-03-18 04:10:20.514 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:10:20.514 -07 000000610 INF: =================== Cycle #122, Flow Cell Temp 60° =================== 17-03-18 04:10:20.514 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:10:20.514 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 04:10:20.514 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:10:20.544 -07 000000610 INF: ReagentValve: Recv 18\r 17-03-18 04:10:20.544 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions. 17-03-18 04:10:20.544 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-18 04:10:20.844 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 04:10:20.864 -07 000000610 INF: ReagentValve: Recv 0278\r 17-03-18 04:10:20.864 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%) 17-03-18 04:10:20.914 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:10:20.934 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 04:10:20.934 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 04:10:21.034 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:10:21.034 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1 17-03-18 04:10:21.084 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:21.114 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-18 04:10:21.114 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-18 04:10:21.114 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 04:10:21.244 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r 17-03-18 04:10:21.284 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:21.644 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:10:21.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1718, R2=1787, Total=3505. Warn if over 250 bubbles per interval. 17-03-18 04:10:24.034 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.989471, 17-03-18 04:10:24.414 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:24.444 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:24.864 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:24.894 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:25.314 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:25.344 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:25.344 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete 17-03-18 04:10:25.344 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:10:25.474 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:25.504 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 04:10:25.504 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 04:10:25.634 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:25.664 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 04:10:25.664 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 04:10:25.664 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 04:10:25.794 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 04:10:25.824 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:26.254 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:26.284 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:26.284 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 04:10:26.284 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:10:26.644 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 10 R1 10 17-03-18 04:10:26.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=10, R2=10, Total=20. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1728, R2=1797, Total=3525. Warn if over 250 bubbles per interval. 17-03-18 04:10:27.504 -07 000000610 INF: AsyncDelayTimer waited 1219ms 17-03-18 04:10:27.504 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start 17-03-18 04:10:27.504 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:10:27.524 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 04:10:27.524 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions. 17-03-18 04:10:27.524 -07 000000610 INF: ReagentValve: Xmit +04\r 17-03-18 04:10:27.654 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 04:10:27.674 -07 000000610 INF: ReagentValve: Recv 00CD\r 17-03-18 04:10:27.674 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%) 17-03-18 04:10:27.724 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:10:27.744 -07 000000610 INF: ReagentValve: Recv 04\r 17-03-18 04:10:27.744 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 04:10:27.844 -07 000000610 INF: =================== Cycle #122, Pumping Reagent CMS (4) =================== 17-03-18 04:10:27.844 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-18 04:10:27.844 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:27.874 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 04:10:27.874 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 04:10:27.874 -07 000000610 INF: =================== Cycle #122, Pumping Reagent CMS (4), Aspirating port InputPort =================== 17-03-18 04:10:28.004 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-18 04:10:28.044 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:29.394 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.018051, 17-03-18 04:10:29.484 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:29.514 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:29.934 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:29.964 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:29.964 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete 17-03-18 04:10:29.964 -07 000000610 INF: =================== Cycle #122, Pumping Reagent CMS (4) =================== 17-03-18 04:10:30.094 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:30.124 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 04:10:30.124 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 04:10:30.254 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:30.284 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 04:10:30.284 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 04:10:30.284 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 04:10:30.414 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 04:10:30.444 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:30.874 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:30.904 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:30.904 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 04:10:30.904 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:10:31.644 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 4 17-03-18 04:10:31.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=4, R2=1, Total=5. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1798, Total=3530. Warn if over 250 bubbles per interval. 17-03-18 04:10:32.124 -07 000000610 INF: AsyncDelayTimer waited 1212ms 17-03-18 04:10:32.124 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 04:10:32.124 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:10:32.144 -07 000000610 INF: ReagentValve: Recv 04\r 17-03-18 04:10:32.144 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions. 17-03-18 04:10:32.144 -07 000000610 INF: ReagentValve: Xmit -03\r 17-03-18 04:10:32.294 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 04:10:32.314 -07 000000610 INF: ReagentValve: Recv 00E1\r 17-03-18 04:10:32.314 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%) 17-03-18 04:10:32.364 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:10:32.384 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 04:10:32.384 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 04:10:32.484 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:10:32.484 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-18 04:10:32.484 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:32.514 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 04:10:32.514 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 04:10:32.514 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 04:10:32.644 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-18 04:10:32.684 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:33.554 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:33.584 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:33.584 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete 17-03-18 04:10:33.584 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:10:33.714 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:33.744 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 04:10:33.744 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 04:10:33.874 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:33.904 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 04:10:33.904 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 04:10:33.904 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 04:10:34.034 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 04:10:34.064 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:34.494 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:34.524 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:34.524 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 04:10:34.524 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:10:34.524 -07 000000579 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 04:10:34.524 -07 000000480 INF: WaitCommand(10000) start 17-03-18 04:10:34.524 -07 000000579 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-18 04:10:34.754 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.031682, 17-03-18 04:10:35.744 -07 000000579 INF: AsyncDelayTimer waited 1214ms 17-03-18 04:10:35.744 -07 000000579 INF: LanePump: Xmit /1?\r 17-03-18 04:10:35.774 -07 000000579 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 04:10:35.774 -07 000000579 INF: LanePump: Current Position of Pump is: 1110 17-03-18 04:10:35.904 -07 000000579 INF: LanePump: Xmit /1V1500OA0R\r 17-03-18 04:10:35.944 -07 000000579 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:36.644 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0 17-03-18 04:10:36.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:10:37.474 -07 000000579 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:37.504 -07 000000579 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:37.924 -07 000000579 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:37.954 -07 000000579 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:37.954 -07 000000579 INF: LanePump: Waited 2009 ms for pump motion to complete 17-03-18 04:10:37.954 -07 000000579 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 04:10:37.954 -07 000000579 INF: =================== =================== 17-03-18 04:10:40.114 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.026244, 17-03-18 04:10:41.644 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:10:41.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:10:44.534 -07 000000480 INF: WaitCommand(10000) end 17-03-18 04:10:44.534 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:10:44.534 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1 17-03-18 04:10:44.534 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:44.564 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-18 04:10:44.564 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-18 04:10:44.564 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 04:10:44.694 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r 17-03-18 04:10:44.734 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:45.474 -07 000000625 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.015368, 17-03-18 04:10:46.644 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:10:46.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:10:50.834 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.993549, 17-03-18 04:10:50.864 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:50.894 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:51.314 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:51.344 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:51.644 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:10:51.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:10:51.764 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:51.794 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:52.214 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:52.244 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:52.664 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:52.694 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:52.694 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete 17-03-18 04:10:52.694 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:10:52.824 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:52.854 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-18 04:10:52.854 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-18 04:10:52.984 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:53.014 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-18 04:10:53.014 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-18 04:10:53.014 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 04:10:53.144 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 04:10:53.174 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:53.604 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:53.634 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:53.634 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 04:10:53.634 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:10:54.854 -07 000000610 INF: AsyncDelayTimer waited 1218ms 17-03-18 04:10:54.854 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start 17-03-18 04:10:54.854 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:10:54.874 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 04:10:54.874 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions. 17-03-18 04:10:54.874 -07 000000610 INF: ReagentValve: Xmit -01\r 17-03-18 04:10:55.084 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 04:10:55.104 -07 000000610 INF: ReagentValve: Recv 0198\r 17-03-18 04:10:55.104 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%) 17-03-18 04:10:55.154 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:10:55.174 -07 000000610 INF: ReagentValve: Recv 01\r 17-03-18 04:10:55.174 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 04:10:55.274 -07 000000610 INF: =================== Cycle #122, Pumping Reagent IMT (1) =================== 17-03-18 04:10:55.274 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-18 04:10:55.274 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:55.314 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-18 04:10:55.314 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-18 04:10:55.314 -07 000000610 INF: =================== Cycle #122, Pumping Reagent IMT (1), Aspirating port InputPort =================== 17-03-18 04:10:55.444 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-18 04:10:55.484 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:56.194 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.974486, 17-03-18 04:10:56.644 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:10:56.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:10:56.924 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:56.954 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:10:57.374 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:57.404 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:57.404 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete 17-03-18 04:10:57.404 -07 000000610 INF: =================== Cycle #122, Pumping Reagent IMT (1) =================== 17-03-18 04:10:57.534 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:57.564 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-18 04:10:57.564 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-18 04:10:57.694 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:10:57.724 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-18 04:10:57.724 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-18 04:10:57.724 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 04:10:57.854 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 04:10:57.884 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:58.314 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:10:58.344 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:10:58.344 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 04:10:58.344 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:10:59.564 -07 000000610 INF: AsyncDelayTimer waited 1219ms 17-03-18 04:10:59.564 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 04:10:59.564 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:10:59.584 -07 000000610 INF: ReagentValve: Recv 01\r 17-03-18 04:10:59.584 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions. 17-03-18 04:10:59.584 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-18 04:10:59.814 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 04:10:59.834 -07 000000610 INF: ReagentValve: Recv 01AC\r 17-03-18 04:10:59.834 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%) 17-03-18 04:10:59.884 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:10:59.904 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 04:10:59.904 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 04:11:00.004 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:11:00.004 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-18 04:11:00.004 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:11:00.034 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-18 04:11:00.034 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-18 04:11:00.034 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 04:11:00.164 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-18 04:11:00.204 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:11:01.074 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:11:01.104 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:11:01.104 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete 17-03-18 04:11:01.104 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:11:01.234 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:11:01.264 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-18 04:11:01.264 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-18 04:11:01.394 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:11:01.424 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-18 04:11:01.424 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-18 04:11:01.424 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 04:11:01.554 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 04:11:01.554 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.988112, 17-03-18 04:11:01.584 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:11:01.644 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:01.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:11:02.014 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:11:02.044 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:11:02.044 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 04:11:02.044 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:11:02.044 -07 000000610 INF: =================== Cycle #122, Flow Cell Temp 65° =================== 17-03-18 04:11:02.044 -07 000000610 INF: =================== Cycle #122, Flow Cell Temp 65°, FC temperature to 65° =================== 17-03-18 04:11:02.214 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-18 04:11:02.214 -07 000000585 INF: FPGA: Recv TEC2EN 17-03-18 04:11:02.224 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:11:02.224 -07 000000610 INF: =================== Cycle #122, Flow Cell Temp 65° =================== 17-03-18 04:11:02.224 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:11:02.224 -07 000000610 INF: WaitCommand(30000) start 17-03-18 04:11:06.644 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:06.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:11:06.914 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.996267, 17-03-18 04:11:11.644 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:11.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:11:12.274 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.983999, 17-03-18 04:11:16.644 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:16.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:11:17.634 -07 000000585 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.985358, 17-03-18 04:11:21.644 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:21.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:11:22.994 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.978563, 17-03-18 04:11:26.644 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:26.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:11:28.354 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.996267, 17-03-18 04:11:31.644 -07 000000479 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:31.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:11:32.234 -07 000000610 INF: WaitCommand(30000) end 17-03-18 04:11:32.234 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:11:32.234 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1 17-03-18 04:11:32.234 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:11:32.264 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-18 04:11:32.264 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-18 04:11:32.264 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 04:11:32.394 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r 17-03-18 04:11:32.434 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:11:32.974 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:11:33.004 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:11:33.004 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete 17-03-18 04:11:33.004 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:11:33.134 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:11:33.164 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-18 04:11:33.164 -07 000000610 INF: LanePump: Current Position of Pump is: 1920 17-03-18 04:11:33.294 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:11:33.324 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-18 04:11:33.324 -07 000000610 INF: LanePump: Current Position of Pump is: 1920 17-03-18 04:11:33.324 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 04:11:33.454 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 04:11:33.484 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:11:33.714 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.009895, 17-03-18 04:11:33.914 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:11:33.944 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:11:33.944 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 04:11:33.944 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:11:33.944 -07 000000474 INF: WaitCommand(30000) start 17-03-18 04:11:33.944 -07 000000625 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 04:11:33.944 -07 000000625 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-18 04:11:35.164 -07 000000625 INF: AsyncDelayTimer waited 1216ms 17-03-18 04:11:35.164 -07 000000625 INF: LanePump: Xmit /1?\r 17-03-18 04:11:35.194 -07 000000625 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-18 04:11:35.194 -07 000000625 INF: LanePump: Current Position of Pump is: 1920 17-03-18 04:11:35.324 -07 000000625 INF: LanePump: Xmit /1V1500OA0R\r 17-03-18 04:11:35.364 -07 000000625 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:11:36.644 -07 000000479 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:36.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:11:37.704 -07 000000625 INF: LanePump: Xmit /1Q\r 17-03-18 04:11:37.734 -07 000000625 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:11:38.154 -07 000000625 INF: LanePump: Xmit /1Q\r 17-03-18 04:11:38.184 -07 000000625 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:11:38.184 -07 000000625 INF: LanePump: Waited 2819 ms for pump motion to complete 17-03-18 04:11:38.184 -07 000000625 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 04:11:38.184 -07 000000625 INF: =================== =================== 17-03-18 04:11:39.074 -07 000000625 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.023489, 17-03-18 04:11:41.644 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:41.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:11:44.434 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.012614, 17-03-18 04:11:46.644 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:46.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:11:49.794 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.999021, 17-03-18 04:11:51.644 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:51.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:11:55.154 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.981281, 17-03-18 04:11:56.644 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:11:56.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:00.514 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.993549, 17-03-18 04:12:01.644 -07 000000625 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:01.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:03.954 -07 000000474 INF: WaitCommand(30000) end 17-03-18 04:12:03.954 -07 000000610 INF: =================== Cycle #122, Flow Cell Temp 22° =================== 17-03-18 04:12:03.954 -07 000000610 INF: =================== Cycle #122, Flow Cell Temp 22°, FC temperature to 22° =================== 17-03-18 04:12:03.954 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl] 17-03-18 04:12:03.954 -07 000000561 INF: FPGA: Recv TEC2TEMP 17-03-18 04:12:03.964 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:12:03.964 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-18 04:12:03.964 -07 000000012 INF: FPGA: Recv TEC2EN 17-03-18 04:12:03.974 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:03.974 -07 000000610 INF: =================== Cycle #122, Flow Cell Temp 22° =================== 17-03-18 04:12:03.974 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:12:03.974 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:12:03.974 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1 17-03-18 04:12:03.974 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:12:04.004 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-18 04:12:04.004 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-18 04:12:04.004 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 04:12:04.134 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r 17-03-18 04:12:04.174 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:12:05.874 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.997626, 17-03-18 04:12:06.644 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:06.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:07.304 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:12:07.334 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:12:07.754 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:12:07.784 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:12:08.204 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:12:08.234 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:12:08.234 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete 17-03-18 04:12:08.234 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:12:08.364 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:12:08.394 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 04:12:08.394 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 04:12:08.524 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:12:08.554 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 04:12:08.554 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 04:12:08.554 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 04:12:08.684 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 04:12:08.714 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:12:09.144 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:12:09.174 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:12:09.174 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 04:12:09.174 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:12:10.394 -07 000000610 INF: AsyncDelayTimer waited 1219ms 17-03-18 04:12:10.394 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start 17-03-18 04:12:10.394 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:12:10.414 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 04:12:10.414 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions. 17-03-18 04:12:10.414 -07 000000610 INF: ReagentValve: Xmit -02\r 17-03-18 04:12:10.564 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 04:12:10.584 -07 000000610 INF: ReagentValve: Recv 00E3\r 17-03-18 04:12:10.584 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%) 17-03-18 04:12:10.634 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:12:10.654 -07 000000610 INF: ReagentValve: Recv 02\r 17-03-18 04:12:10.654 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 04:12:10.754 -07 000000610 INF: =================== Cycle #122, Pumping Reagent USM (2) =================== 17-03-18 04:12:10.754 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-18 04:12:10.754 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:12:10.784 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 04:12:10.784 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 04:12:10.784 -07 000000610 INF: =================== Cycle #122, Pumping Reagent USM (2), Aspirating port InputPort =================== 17-03-18 04:12:10.914 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-18 04:12:10.954 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:12:11.234 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.985358, 17-03-18 04:12:11.644 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:11.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:12.394 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:12:12.424 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:12:12.844 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:12:12.874 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:12:12.874 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete 17-03-18 04:12:12.874 -07 000000610 INF: =================== Cycle #122, Pumping Reagent USM (2) =================== 17-03-18 04:12:13.004 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:12:13.034 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 04:12:13.034 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 04:12:13.164 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:12:13.194 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 04:12:13.194 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 04:12:13.194 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 04:12:13.324 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 04:12:13.354 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:12:13.784 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:12:13.814 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:12:13.814 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 04:12:13.814 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:12:15.034 -07 000000610 INF: AsyncDelayTimer waited 1220ms 17-03-18 04:12:15.034 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 04:12:15.034 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:12:15.054 -07 000000610 INF: ReagentValve: Recv 02\r 17-03-18 04:12:15.054 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions. 17-03-18 04:12:15.054 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-18 04:12:15.204 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 04:12:15.224 -07 000000610 INF: ReagentValve: Recv 00E3\r 17-03-18 04:12:15.224 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%) 17-03-18 04:12:15.274 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:12:15.294 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 04:12:15.294 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 04:12:15.394 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:12:15.394 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-18 04:12:15.394 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:12:15.424 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 04:12:15.424 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 04:12:15.424 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 04:12:15.554 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-18 04:12:15.594 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:12:16.464 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:12:16.494 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:12:16.494 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete 17-03-18 04:12:16.494 -07 000000610 INF: =================== Cycle #122, Pumping Reagent PR2 (3) =================== 17-03-18 04:12:16.594 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.978563, 17-03-18 04:12:16.624 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:12:16.644 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:16.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:16.654 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 04:12:16.654 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 04:12:16.784 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 04:12:16.814 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 04:12:16.814 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 04:12:16.814 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 04:12:16.944 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 04:12:16.974 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:12:17.404 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 04:12:17.434 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:12:17.434 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 04:12:17.434 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:12:17.434 -07 000000579 INF: WaitCommand(10000) start 17-03-18 04:12:17.434 -07 000000585 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 04:12:17.434 -07 000000585 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-18 04:12:18.654 -07 000000585 INF: AsyncDelayTimer waited 1216ms 17-03-18 04:12:18.654 -07 000000585 INF: LanePump: Xmit /1?\r 17-03-18 04:12:18.684 -07 000000585 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 04:12:18.684 -07 000000585 INF: LanePump: Current Position of Pump is: 1110 17-03-18 04:12:18.814 -07 000000585 INF: LanePump: Xmit /1V1500OA0R\r 17-03-18 04:12:18.854 -07 000000585 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:12:20.384 -07 000000585 INF: LanePump: Xmit /1Q\r 17-03-18 04:12:20.414 -07 000000585 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 04:12:20.834 -07 000000585 INF: LanePump: Xmit /1Q\r 17-03-18 04:12:20.864 -07 000000585 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 04:12:20.864 -07 000000585 INF: LanePump: Waited 2009 ms for pump motion to complete 17-03-18 04:12:20.864 -07 000000585 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 04:12:20.864 -07 000000585 INF: =================== =================== 17-03-18 04:12:21.644 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:21.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:21.954 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.986717, 17-03-18 04:12:26.644 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:26.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:27.314 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.016692, 17-03-18 04:12:27.444 -07 000000579 INF: WaitCommand(10000) end 17-03-18 04:12:27.444 -07 000000610 INF: =================== Cycle #122, Imaging =================== 17-03-18 04:12:27.444 -07 000000610 INF: Imaging Cycle 122: ScanTilesCommand Cycle 122 time start. 17-03-18 04:12:27.444 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand 17-03-18 04:12:27.444 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:12:27.474 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 04:12:27.474 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions. 17-03-18 04:12:27.474 -07 000000610 INF: ReagentValve: Xmit -18\r 17-03-18 04:12:27.774 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 04:12:27.794 -07 000000610 INF: ReagentValve: Recv 0278\r 17-03-18 04:12:27.794 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%) 17-03-18 04:12:27.844 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 04:12:27.864 -07 000000610 INF: ReagentValve: Recv 18\r 17-03-18 04:12:27.864 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:12:27.864 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:12:27.864 -07 000000608 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start. 17-03-18 04:12:27.864 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:12:27.864 -07 000000608 INF: FPGA: Xmit EXLED1ON\n [RedLED] 17-03-18 04:12:27.864 -07 000000447 INF: FPGA: Recv EXLED1ON 17-03-18 04:12:27.874 -07 000000608 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 04:12:27.874 -07 000000608 INF: FPGA: Xmit EXLED1ADCR\n [RedLED] 17-03-18 04:12:27.874 -07 000000561 INF: FPGA: Recv EXLED1ADCR 23168 17-03-18 04:12:27.884 -07 000000608 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:27.884 -07 000000608 INF: RedLED: Using Red data: Photodiode ADC 23168 --> 7.4 mW (old method), or 205.3 mW (new method). Difference = 197.9 mW 17-03-18 04:12:27.884 -07 000000608 INF: FPGA: Xmit EXLED1OFF\n [RedLED] 17-03-18 04:12:27.884 -07 000000012 INF: FPGA: Recv EXLED1OFF 17-03-18 04:12:27.894 -07 000000608 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:27.894 -07 000000608 INF: RedLED: LED was on for 20 ms 17-03-18 04:12:27.894 -07 000000608 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 23 ms. 17-03-18 04:12:27.894 -07 000000608 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start. 17-03-18 04:12:27.894 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:12:27.894 -07 000000608 INF: FPGA: Xmit EXLED2ON\n [GreenLED] 17-03-18 04:12:27.894 -07 000000501 INF: FPGA: Recv EXLED2ON 17-03-18 04:12:27.904 -07 000000608 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:12:27.904 -07 000000608 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED] 17-03-18 04:12:27.904 -07 000000618 INF: FPGA: Recv EXLED1ADCR 2098 17-03-18 04:12:27.914 -07 000000608 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:27.914 -07 000000608 INF: GreenLED: Using Green data: Photodiode ADC 2098 --> 0.9 mW (old method), or 182.3 mW (new method). Difference = 181.4 mW 17-03-18 04:12:27.914 -07 000000608 INF: FPGA: Xmit EXLED2OFF\n [GreenLED] 17-03-18 04:12:27.914 -07 000000447 INF: FPGA: Recv EXLED2OFF 17-03-18 04:12:27.924 -07 000000608 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:27.924 -07 000000608 INF: GreenLED: LED was on for 20 ms 17-03-18 04:12:27.924 -07 000000608 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms. 17-03-18 04:12:27.934 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator] 17-03-18 04:12:27.934 -07 000000444 INF: FPGA: Recv EMCUR 17-03-18 04:12:27.944 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 14 ms overall 17-03-18 04:12:27.944 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator] 17-03-18 04:12:28.444 -07 000000444 INF: FPGA: Recv EMOUT 17-03-18 04:12:28.444 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall 17-03-18 04:12:28.444 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator] 17-03-18 04:12:28.444 -07 000000501 INF: FPGA: Recv EMCUR 17-03-18 04:12:28.454 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:12:28.454 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 04:12:28.454 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.380859375, Z-Position -0.126574110425069. ------ 17-03-18 04:12:28.454 -07 000000487 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:12:28.454 -07 000000479 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17842 mm 17-03-18 04:12:28.454 -07 000000479 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:12:28.454 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True) 17-03-18 04:12:28.454 -07 000000611 INF: Y Motor: Moving to 59.9126 mm, started at 75.3809 mm, delta = -15.4683 mm 17-03-18 04:12:28.454 -07 000000626 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:12:28.454 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 38975, sync = True, waitForSettling = False) 17-03-18 04:12:28.454 -07 000000512 INF: Z Motor: Moving to -0.178416 mm, started at -0.126574 mm, distance = -51.84 um 17-03-18 04:12:28.464 -07 000000487 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:12:28.464 -07 000000512 INF: FPGA: Xmit ZDACW 38975\n [Z Motor] 17-03-18 04:12:28.464 -07 000000608 INF: FPGA: Recv ZDACW 17-03-18 04:12:28.474 -07 000000512 INF: FPGA: 'ZDACW 38975' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-18 04:12:28.474 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:28.474 -07 000000455 INF: FPGA: Recv YRDPOS 154381 17-03-18 04:12:28.484 -07 000000487 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 04:12:28.484 -07 000000611 INF: FPGA: 'YRDPOS' command took 3 ms to send, 0 ms to get response, and 22 ms overall 17-03-18 04:12:28.484 -07 000000611 INF: Y Motor: Encoder = 154381 = motor step 120610.2 = 75.3813 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:28.484 -07 000000611 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False 17-03-18 04:12:28.484 -07 000000611 INF: Y Motor: Moving to 122701 encoder counts 17-03-18 04:12:28.494 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:28.494 -07 000000501 INF: FPGA: Recv ZDACR 38975 17-03-18 04:12:28.504 -07 000000611 INF: FPGA: Xmit YMVTO 122701\n [Y Motor] 17-03-18 04:12:28.504 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 04:12:28.504 -07 000000512 INF: Z Motor: MoveAbsStepped took 42 ms (did NOT wait for settling yet)) 17-03-18 04:12:28.684 -07 000000590 INF: FPGA: Recv FOCMRRFOC 17-03-18 04:12:28.684 -07 000000487 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall 17-03-18 04:12:30.184 -07 000000626 INF: FPGA: Recv YMVTO 122702 24778 17-03-18 04:12:30.184 -07 000000611 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1703 ms overall 17-03-18 04:12:30.184 -07 000000611 INF: Y Motor: Position error before settling = 1 encoder counts (0.000 mm) 17-03-18 04:12:30.184 -07 000000611 INF: Y Motor: To move from 75.381 to 59.913 (-15.468 mm) should take 24750 steps, but required 24778 steps (15.486 mm). Slippage = 0.018 mm (0.00%). 17-03-18 04:12:30.184 -07 000000611 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1703 ms, distance = 15.468 mm, average velocity = 9.083 mm/sec 17-03-18 04:12:31.644 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:31.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:32.674 -07 000000474 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.990831, 17-03-18 04:12:33.034 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:33.034 -07 000000437 INF: FPGA: Recv YRDPOS 122695 17-03-18 04:12:33.044 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:33.044 -07 000000611 INF: Y Motor: Encoder = 122695 = motor step 95855.5 = 59.9097 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:33.074 -07 000000611 INF: Y Motor: After move to 59.912609, error = -0.002941, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:12:33.074 -07 000000611 INF: Y Motor: Position error after settling = -6 encoder counts (-0.003 mm), Delta during settling = -7 counts (-0.003 mm) 17-03-18 04:12:33.074 -07 000000611 INF: Y Motor: Moved to 59.9097 after 4614 ms 17-03-18 04:12:33.074 -07 000000479 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178416 mm (DAC = 38975) 17-03-18 04:12:33.074 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:33.074 -07 000000438 INF: FPGA: Recv ZSGSRD 37070 17-03-18 04:12:33.084 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:12:33.084 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:33.084 -07 000000585 INF: FPGA: Recv ZSGSRD 37065 17-03-18 04:12:33.094 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:33.094 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:33.094 -07 000000579 INF: FPGA: Recv ZSGSRD 37059 17-03-18 04:12:33.104 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:33.104 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:33.104 -07 000000625 INF: FPGA: Recv ZSGSRD 37062 17-03-18 04:12:33.114 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:33.114 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:33.114 -07 000000447 INF: FPGA: Recv ZSGSRD 37065 17-03-18 04:12:33.124 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:33.124 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:33.124 -07 000000444 INF: FPGA: Recv ZSGSRD 37062 17-03-18 04:12:33.134 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:33.134 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:33.134 -07 000000455 INF: FPGA: Recv ZSGSRD 37063 17-03-18 04:12:33.144 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:33.144 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:33.144 -07 000000590 INF: FPGA: Recv ZSGSRD 37059 17-03-18 04:12:33.154 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:33.154 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:33.154 -07 000000625 INF: FPGA: Recv ZSGSRD 37068 17-03-18 04:12:33.164 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:33.164 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:33.164 -07 000000512 INF: FPGA: Recv ZSGSRD 37067 17-03-18 04:12:33.174 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:33.174 -07 000000479 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:33.174 -07 000000444 INF: FPGA: Recv ZPIEZORD 33237 17-03-18 04:12:33.184 -07 000000479 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:33.184 -07 000000479 INF: Z Motor: Piezo is near 51.0 V (nominally 0 to 100 V), expect near 59.5 V, since DAC is at 5.947 V. Piezo Error = -8.5 V. 17-03-18 04:12:33.184 -07 000000479 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.4 um, Read 10 ADC samples: Avg = 37064 (-177.5 uncal um), Error = 0.9 uncal um, Median = 37064 (-177.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 37059 (-177.5 uncal um), Max = 37070 (-177.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:12:33.184 -07 000000479 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37064, posNoise = 6, negNoise = 5 17-03-18 04:12:33.184 -07 000000479 INF: Z Motor: After move to -0.178416, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:33.184 -07 000000479 INF: Z Motor: Settle wait time = 4617 ms, measure time = 105 ms (allowed 150 ms), total time = 4722 ms 17-03-18 04:12:33.184 -07 000000479 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-18 04:12:33.234 -07 000000479 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4775 ms 17-03-18 04:12:33.234 -07 000000479 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:12:33.234 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:12:33.234 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:12:33.234 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:12:33.234 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 04:12:33.234 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:12:33.234 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:12:33.244 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:12:33.244 -07 000000626 INF: Camera: sBCa_SetPowerMode(785074288, 1) start. 17-03-18 04:12:33.264 -07 000000626 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms. 17-03-18 04:12:33.264 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 04:12:33.264 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms. 17-03-18 04:12:33.264 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 04:12:33.284 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms. 17-03-18 04:12:33.284 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms. 17-03-18 04:12:33.284 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 04:12:33.334 -07 000000455 INF: FPGA: Recv @CAMSNAP turning led on 42 17-03-18 04:12:33.634 -07 000000611 INF: FPGA: Recv @CAMSNAP img rdy 342 17-03-18 04:12:33.634 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 342 17-03-18 04:12:33.634 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 04:12:33.634 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2299751224, 0x0, 559484976) start. 17-03-18 04:12:33.664 -07 000000585 INF: FPGA: Recv @CAMSNAP 380 17-03-18 04:12:33.664 -07 000000455 INF: FPGA: Recv CAMSNAP 17-03-18 04:12:33.664 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall 17-03-18 04:12:33.754 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2299751224, 0x0, 559484976) end. Duration was 126 ms. 17-03-18 04:12:33.754 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:33.764 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 04:12:33.764 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 04:12:33.864 -07 000000590 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:12:33.864 -07 000000487 INF: Image SNR check: start 17-03-18 04:12:33.864 -07 000000561 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:12:33.874 -07 000000590 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:12:33.874 -07 000000590 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 04:12:33.874 -07 000000487 INF: Image SNR check: pass [peak (Max-Min)=139.83] 17-03-18 04:12:33.874 -07 000000487 INF: Autofocus start 17-03-18 04:12:33.874 -07 000000487 INF: MeasureProfile start 17-03-18 04:12:33.884 -07 000000487 INF: MeasureProfile done 17-03-18 04:12:33.884 -07 000000487 INF: X=16 Z correction [um]=0.01042744 17-03-18 04:12:33.894 -07 000000487 INF: Autofocus finished 17-03-18 04:12:34.074 -07 000000561 INF: FPGA: Recv FOCMRRIMG 17-03-18 04:12:34.074 -07 000000590 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 04:12:34.074 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.90966796875, Z-position -0.178430350833363. ---------- 17-03-18 04:12:34.074 -07 000000610 INF: Cycle 122 Tile 1 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:12:34.084 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37490, sync = True, waitForSettling = True) 17-03-18 04:12:34.084 -07 000000610 INF: Z Motor: Moving to -0.171618 mm, started at -0.178430 mm, distance = 6.81 um 17-03-18 04:12:34.084 -07 000000610 INF: FPGA: Xmit ZDACW 37490\n [Z Motor] 17-03-18 04:12:34.084 -07 000000455 INF: FPGA: Recv ZDACW 17-03-18 04:12:34.094 -07 000000610 INF: FPGA: 'ZDACW 37490' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:34.094 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:34.094 -07 000000561 INF: FPGA: Recv ZDACR 37490 17-03-18 04:12:34.104 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:34.104 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:12:34.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:34.254 -07 000000611 INF: FPGA: Recv ZSGSRD 36005 17-03-18 04:12:34.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:34.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:34.264 -07 000000437 INF: FPGA: Recv ZSGSRD 36007 17-03-18 04:12:34.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:34.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:34.274 -07 000000561 INF: FPGA: Recv ZSGSRD 36010 17-03-18 04:12:34.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:34.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:34.284 -07 000000579 INF: FPGA: Recv ZSGSRD 36001 17-03-18 04:12:34.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:34.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:34.294 -07 000000480 INF: FPGA: Recv ZSGSRD 36008 17-03-18 04:12:34.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:34.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:34.304 -07 000000512 INF: FPGA: Recv ZSGSRD 36003 17-03-18 04:12:34.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:34.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:34.314 -07 000000501 INF: FPGA: Recv ZSGSRD 36003 17-03-18 04:12:34.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:34.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:34.324 -07 000000608 INF: FPGA: Recv ZSGSRD 36007 17-03-18 04:12:34.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:12:34.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:34.334 -07 000000611 INF: FPGA: Recv ZSGSRD 35998 17-03-18 04:12:34.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:34.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:34.344 -07 000000561 INF: FPGA: Recv ZSGSRD 36003 17-03-18 04:12:34.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:34.354 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:34.354 -07 000000455 INF: FPGA: Recv ZPIEZORD 31844 17-03-18 04:12:34.364 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:34.364 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.721 V. Piezo Error = -9.2 V. 17-03-18 04:12:34.364 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.6 um, Read 10 ADC samples: Avg = 36004 (-170.7 uncal um), Error = 0.9 uncal um, Median = 36004 (-170.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35998 (-170.7 uncal um), Max = 36010 (-170.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:12:34.364 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36004, posNoise = 6, negNoise = 6 17-03-18 04:12:34.364 -07 000000610 INF: Z Motor: After move to -0.171618, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:34.364 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms) 17-03-18 04:12:34.364 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:12:34.364 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:12:34.364 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:12:34.364 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:12:34.364 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:12:34.364 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:12:34.364 -07 000000585 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:12:34.364 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:12:34.364 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:12:34.364 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:12:34.364 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:12:34.364 -07 000000585 INF: Camera: sBCa_SetPowerMode(785074704, 1) start. 17-03-18 04:12:34.374 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:12:34.374 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:12:34.384 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 04:12:34.384 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:12:34.394 -07 000000585 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 22 ms. 17-03-18 04:12:34.394 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:12:34.394 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:12:34.394 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:12:34.404 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 04:12:34.404 -07 000000585 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 42 ms. 17-03-18 04:12:34.414 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 37667 150\n [Camera] 17-03-18 04:12:34.604 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:12:35.024 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:12:35.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:12:35.034 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:35.034 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:35.034 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2370141864, 0x0, 391868352) start. 17-03-18 04:12:35.034 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:12:35.034 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:12:35.034 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:35.034 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:35.034 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 04:12:35.214 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37667 802 17-03-18 04:12:35.364 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:12:35.434 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2370141864, 0x0, 391868352) end. Duration was 400 ms. 17-03-18 04:12:35.434 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-18 04:12:35.434 -07 000000608 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:35.434 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 399 ms. 17-03-18 04:12:35.434 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-18 04:12:35.434 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:35.434 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms. 17-03-18 04:12:35.434 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms. 17-03-18 04:12:35.444 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms. 17-03-18 04:12:35.444 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms. 17-03-18 04:12:35.564 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:12:35.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:12:35.574 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:35.574 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:35.574 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 04:12:35.574 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:12:35.574 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:12:35.574 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:35.694 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:35.694 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 04:12:35.764 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:12:35.764 -07 000000618 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:12:35.764 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 37667 150' command took 2 ms to send, 1344 ms to get response, and 1354 ms overall 17-03-18 04:12:35.764 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.171878 17-03-18 04:12:35.764 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17188 mm 17-03-18 04:12:35.764 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:12:35.764 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True) 17-03-18 04:12:35.764 -07 000000590 INF: Y Motor: Moving to 60.7426 mm, started at 59.9097 mm, delta = 0.8329 mm 17-03-18 04:12:35.764 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:35.764 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 37547, sync = True, waitForSettling = False) 17-03-18 04:12:35.764 -07 000000626 INF: Z Motor: Moving to -0.171879 mm, started at -0.171621 mm, distance = -0.26 um 17-03-18 04:12:35.774 -07 000000626 INF: FPGA: Xmit ZDACW 37547\n [Z Motor] 17-03-18 04:12:35.774 -07 000000455 INF: FPGA: Recv YRDPOS 122695 17-03-18 04:12:35.774 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-18 04:12:35.774 -07 000000590 INF: Y Motor: Encoder = 122695 = motor step 95855.5 = 59.9097 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:35.774 -07 000000590 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:12:35.774 -07 000000590 INF: Y Motor: Moving 1333 steps1 17-03-18 04:12:35.774 -07 000000618 INF: FPGA: Recv ZDACW 17-03-18 04:12:35.784 -07 000000626 INF: FPGA: 'ZDACW 37547' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:35.784 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:12:35.794 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:35.794 -07 000000487 INF: FPGA: Recv ZDACR 37547 17-03-18 04:12:35.804 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:12:35.804 -07 000000626 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet)) 17-03-18 04:12:35.974 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 401 ms. 17-03-18 04:12:35.974 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 04:12:35.974 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:35.974 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:12:35.974 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms. 17-03-18 04:12:36.094 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 402 ms. 17-03-18 04:12:36.094 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms. 17-03-18 04:12:36.094 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:36.104 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms. 17-03-18 04:12:36.104 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 532 ms. 17-03-18 04:12:36.154 -07 000000455 INF: FPGA: Recv YMVTILE 17-03-18 04:12:36.154 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall 17-03-18 04:12:36.194 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:36.194 -07 000000585 INF: FPGA: Recv YRDPOS 124379 17-03-18 04:12:36.204 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:12:36.204 -07 000000590 INF: Y Motor: Encoder = 124379 = motor step 97171.1 = 60.7319 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:36.204 -07 000000590 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm) 17-03-18 04:12:36.204 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.833 mm, average velocity = 2.158 mm/sec 17-03-18 04:12:36.644 -07 000000474 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:36.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:37.154 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:37.154 -07 000000625 INF: FPGA: Recv YRDPOS 124379 17-03-18 04:12:37.164 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.164 -07 000000590 INF: Y Motor: Encoder = 124379 = motor step 97171.1 = 60.7319 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:37.194 -07 000000590 INF: Y Motor: After move to 60.742607, error = -0.010674, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:12:37.194 -07 000000590 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:12:37.194 -07 000000590 INF: Y Motor: Moved to 60.7319 after 1422 ms (table move) 17-03-18 04:12:37.194 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171879 mm (DAC = 37547) 17-03-18 04:12:37.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.194 -07 000000608 INF: FPGA: Recv ZSGSRD 36050 17-03-18 04:12:37.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:12:37.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.204 -07 000000487 INF: FPGA: Recv ZSGSRD 36043 17-03-18 04:12:37.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.214 -07 000000585 INF: FPGA: Recv ZSGSRD 36049 17-03-18 04:12:37.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.224 -07 000000626 INF: FPGA: Recv ZSGSRD 36054 17-03-18 04:12:37.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.234 -07 000000590 INF: FPGA: Recv ZSGSRD 36047 17-03-18 04:12:37.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.244 -07 000000444 INF: FPGA: Recv ZSGSRD 36047 17-03-18 04:12:37.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.254 -07 000000438 INF: FPGA: Recv ZSGSRD 36042 17-03-18 04:12:37.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.264 -07 000000585 INF: FPGA: Recv ZSGSRD 36052 17-03-18 04:12:37.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.274 -07 000000626 INF: FPGA: Recv ZSGSRD 36048 17-03-18 04:12:37.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.284 -07 000000608 INF: FPGA: Recv ZSGSRD 36045 17-03-18 04:12:37.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.294 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:37.294 -07 000000626 INF: FPGA: Recv ZPIEZORD 31949 17-03-18 04:12:37.304 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.304 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.729 V. Piezo Error = -9.0 V. 17-03-18 04:12:37.304 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36048 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36048 (-171.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36042 (-171.0 uncal um), Max = 36054 (-171.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:12:37.304 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36048, posNoise = 6, negNoise = 6 17-03-18 04:12:37.304 -07 000000610 INF: Z Motor: After move to -0.171879, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:37.304 -07 000000610 INF: Z Motor: Settle wait time = 1424 ms, measure time = 107 ms (allowed 150 ms), total time = 1531 ms 17-03-18 04:12:37.304 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:12:37.354 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1583 ms 17-03-18 04:12:37.354 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:12:37.354 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73193359375, Z-position -0.171903351297334. ---------- 17-03-18 04:12:37.354 -07 000000610 INF: Cycle 122 Tile 2 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:12:37.354 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37370, sync = True, waitForSettling = True) 17-03-18 04:12:37.354 -07 000000610 INF: Z Motor: Moving to -0.171069 mm, started at -0.171903 mm, distance = 0.83 um 17-03-18 04:12:37.354 -07 000000610 INF: FPGA: Xmit ZDACW 37370\n [Z Motor] 17-03-18 04:12:37.354 -07 000000585 INF: FPGA: Recv ZDACW 17-03-18 04:12:37.364 -07 000000610 INF: FPGA: 'ZDACW 37370' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:12:37.364 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:37.364 -07 000000512 INF: FPGA: Recv ZDACR 37370 17-03-18 04:12:37.374 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.374 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:12:37.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.524 -07 000000012 INF: FPGA: Recv ZSGSRD 35922 17-03-18 04:12:37.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:37.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.534 -07 000000480 INF: FPGA: Recv ZSGSRD 35919 17-03-18 04:12:37.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.544 -07 000000625 INF: FPGA: Recv ZSGSRD 35923 17-03-18 04:12:37.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.554 -07 000000479 INF: FPGA: Recv ZSGSRD 35921 17-03-18 04:12:37.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.564 -07 000000455 INF: FPGA: Recv ZSGSRD 35918 17-03-18 04:12:37.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.574 -07 000000611 INF: FPGA: Recv ZSGSRD 35916 17-03-18 04:12:37.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.584 -07 000000480 INF: FPGA: Recv ZSGSRD 35921 17-03-18 04:12:37.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.594 -07 000000487 INF: FPGA: Recv ZSGSRD 35922 17-03-18 04:12:37.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.604 -07 000000012 INF: FPGA: Recv ZSGSRD 35920 17-03-18 04:12:37.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:37.614 -07 000000487 INF: FPGA: Recv ZSGSRD 35919 17-03-18 04:12:37.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.624 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:37.624 -07 000000480 INF: FPGA: Recv ZPIEZORD 31751 17-03-18 04:12:37.634 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:37.634 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.702 V. Piezo Error = -9.2 V. 17-03-18 04:12:37.634 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35920 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35920 (-170.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35916 (-170.2 uncal um), Max = 35923 (-170.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 04:12:37.634 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35920, posNoise = 3, negNoise = 4 17-03-18 04:12:37.634 -07 000000610 INF: Z Motor: After move to -0.171069, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:37.634 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:12:37.634 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:12:37.634 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:12:37.634 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:12:37.634 -07 000000474 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:12:37.634 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:12:37.634 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:12:37.634 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:12:37.634 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:12:37.634 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:12:37.634 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:12:37.634 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:12:37.634 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:12:37.644 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:12:37.644 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:12:37.644 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:12:37.644 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:12:37.654 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 04:12:37.654 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:12:37.654 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 04:12:37.654 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:12:37.654 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 37547 150\n [Camera] 17-03-18 04:12:37.854 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:12:38.034 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.952638, 17-03-18 04:12:38.274 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:12:38.274 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:12:38.274 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:38.274 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:12:38.284 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:12:38.284 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:38.284 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:38.284 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-18 04:12:38.284 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:38.284 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:12:38.464 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37547 802 17-03-18 04:12:38.614 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:12:38.674 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 396 ms. 17-03-18 04:12:38.674 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-18 04:12:38.674 -07 000000608 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:38.684 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:38.684 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-18 04:12:38.684 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 396 ms. 17-03-18 04:12:38.684 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms. 17-03-18 04:12:38.684 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:38.684 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:38.694 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms. 17-03-18 04:12:38.814 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:12:38.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:12:38.824 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:38.824 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:12:38.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:12:38.824 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:38.824 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:38.824 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2299751224, 0x0, 418435064) start. 17-03-18 04:12:38.824 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:38.824 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:12:39.014 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:12:39.014 -07 000000480 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:12:39.014 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 37547 150' command took 2 ms to send, 1341 ms to get response, and 1352 ms overall 17-03-18 04:12:39.014 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.171832 17-03-18 04:12:39.014 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17183 mm 17-03-18 04:12:39.014 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:12:39.014 -07 000000437 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True) 17-03-18 04:12:39.014 -07 000000437 INF: Y Motor: Moving to 61.5726 mm, started at 60.7319 mm, delta = 0.8407 mm 17-03-18 04:12:39.014 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:39.014 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 37537, sync = True, waitForSettling = False) 17-03-18 04:12:39.014 -07 000000444 INF: Z Motor: Moving to -0.171833 mm, started at -0.171081 mm, distance = -0.75 um 17-03-18 04:12:39.024 -07 000000444 INF: FPGA: Xmit ZDACW 37537\n [Z Motor] 17-03-18 04:12:39.024 -07 000000479 INF: FPGA: Recv YRDPOS 124379 17-03-18 04:12:39.024 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 04:12:39.024 -07 000000437 INF: Y Motor: Encoder = 124379 = motor step 97171.1 = 60.7319 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:39.024 -07 000000437 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:12:39.024 -07 000000437 INF: Y Motor: Moving 1345 steps-22 17-03-18 04:12:39.024 -07 000000579 INF: FPGA: Recv ZDACW 17-03-18 04:12:39.034 -07 000000444 INF: FPGA: 'ZDACW 37537' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 04:12:39.034 -07 000000437 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:12:39.044 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:39.044 -07 000000608 INF: FPGA: Recv ZDACR 37537 17-03-18 04:12:39.054 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:12:39.054 -07 000000444 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet)) 17-03-18 04:12:39.214 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2299751224, 0x0, 418435064) end. Duration was 388 ms. 17-03-18 04:12:39.214 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 04:12:39.214 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:39.214 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:39.214 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 390 ms. 17-03-18 04:12:39.214 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 04:12:39.214 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:39.224 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:39.224 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 04:12:39.224 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-18 04:12:39.404 -07 000000438 INF: FPGA: Recv YMVTILE 17-03-18 04:12:39.404 -07 000000437 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 04:12:39.454 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:39.464 -07 000000447 INF: FPGA: Recv YRDPOS 126080 17-03-18 04:12:39.464 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:12:39.464 -07 000000437 INF: Y Motor: Encoder = 126080 = motor step 98500.0 = 61.5625 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:39.464 -07 000000437 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm) 17-03-18 04:12:39.464 -07 000000437 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.841 mm, average velocity = 2.172 mm/sec 17-03-18 04:12:40.414 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:40.414 -07 000000579 INF: FPGA: Recv YRDPOS 126080 17-03-18 04:12:40.424 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:40.424 -07 000000437 INF: Y Motor: Encoder = 126080 = motor step 98500.0 = 61.5625 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:40.454 -07 000000437 INF: Y Motor: After move to 61.572609, error = -0.010109, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:12:40.454 -07 000000437 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:12:40.454 -07 000000437 INF: Y Motor: Moved to 61.5625 after 1433 ms (table move) 17-03-18 04:12:40.454 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171833 mm (DAC = 37537) 17-03-18 04:12:40.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.454 -07 000000447 INF: FPGA: Recv ZSGSRD 36045 17-03-18 04:12:40.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:12:40.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.464 -07 000000585 INF: FPGA: Recv ZSGSRD 36039 17-03-18 04:12:40.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.474 -07 000000437 INF: FPGA: Recv ZSGSRD 36038 17-03-18 04:12:40.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.484 -07 000000012 INF: FPGA: Recv ZSGSRD 36041 17-03-18 04:12:40.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.494 -07 000000438 INF: FPGA: Recv ZSGSRD 36044 17-03-18 04:12:40.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.504 -07 000000512 INF: FPGA: Recv ZSGSRD 36040 17-03-18 04:12:40.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.514 -07 000000501 INF: FPGA: Recv ZSGSRD 36036 17-03-18 04:12:40.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.524 -07 000000437 INF: FPGA: Recv ZSGSRD 36030 17-03-18 04:12:40.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.534 -07 000000561 INF: FPGA: Recv ZSGSRD 36034 17-03-18 04:12:40.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.544 -07 000000438 INF: FPGA: Recv ZSGSRD 36038 17-03-18 04:12:40.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.554 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:40.554 -07 000000474 INF: FPGA: Recv ZPIEZORD 31947 17-03-18 04:12:40.564 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.564 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.728 V. Piezo Error = -9.0 V. 17-03-18 04:12:40.564 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.8 um, Read 10 ADC samples: Avg = 36038 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36038 (-171.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 36030 (-170.9 uncal um), Max = 36045 (-171.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 04:12:40.564 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36038, posNoise = 7, negNoise = 8 17-03-18 04:12:40.564 -07 000000610 INF: Z Motor: After move to -0.171833, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:40.564 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 107 ms (allowed 150 ms), total time = 1542 ms 17-03-18 04:12:40.564 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:12:40.614 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms 17-03-18 04:12:40.614 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:12:40.614 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.5625, Z-position -0.171839109175916. ---------- 17-03-18 04:12:40.614 -07 000000610 INF: Cycle 122 Tile 3 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:12:40.614 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37360, sync = True, waitForSettling = True) 17-03-18 04:12:40.614 -07 000000610 INF: Z Motor: Moving to -0.171023 mm, started at -0.171839 mm, distance = 0.82 um 17-03-18 04:12:40.614 -07 000000610 INF: FPGA: Xmit ZDACW 37360\n [Z Motor] 17-03-18 04:12:40.614 -07 000000618 INF: FPGA: Recv ZDACW 17-03-18 04:12:40.624 -07 000000610 INF: FPGA: 'ZDACW 37360' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:12:40.624 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:40.624 -07 000000512 INF: FPGA: Recv ZDACR 37360 17-03-18 04:12:40.634 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.634 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:12:40.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.784 -07 000000447 INF: FPGA: Recv ZSGSRD 35920 17-03-18 04:12:40.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:40.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.794 -07 000000487 INF: FPGA: Recv ZSGSRD 35919 17-03-18 04:12:40.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.804 -07 000000625 INF: FPGA: Recv ZSGSRD 35912 17-03-18 04:12:40.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.814 -07 000000479 INF: FPGA: Recv ZSGSRD 35912 17-03-18 04:12:40.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.824 -07 000000512 INF: FPGA: Recv ZSGSRD 35913 17-03-18 04:12:40.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.834 -07 000000585 INF: FPGA: Recv ZSGSRD 35912 17-03-18 04:12:40.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.844 -07 000000479 INF: FPGA: Recv ZSGSRD 35908 17-03-18 04:12:40.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.854 -07 000000579 INF: FPGA: Recv ZSGSRD 35908 17-03-18 04:12:40.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.864 -07 000000585 INF: FPGA: Recv ZSGSRD 35909 17-03-18 04:12:40.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:40.874 -07 000000561 INF: FPGA: Recv ZSGSRD 35913 17-03-18 04:12:40.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.884 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:40.884 -07 000000474 INF: FPGA: Recv ZPIEZORD 31744 17-03-18 04:12:40.894 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:40.894 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.701 V. Piezo Error = -9.2 V. 17-03-18 04:12:40.894 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.0 um, Read 10 ADC samples: Avg = 35913 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35912 (-170.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35908 (-170.1 uncal um), Max = 35920 (-170.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:12:40.894 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35913, posNoise = 7, negNoise = 5 17-03-18 04:12:40.894 -07 000000610 INF: Z Motor: After move to -0.171023, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:40.894 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:12:40.894 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:12:40.894 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:12:40.894 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:12:40.894 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:12:40.894 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:12:40.894 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:12:40.894 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:12:40.894 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:12:40.894 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:12:40.894 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:12:40.894 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:12:40.894 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:12:40.904 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:12:40.904 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:12:40.904 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:12:40.904 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:12:40.914 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 17 ms. 17-03-18 04:12:40.914 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 04:12:40.914 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms. 17-03-18 04:12:40.914 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 04:12:40.924 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 37537 150\n [Camera] 17-03-18 04:12:41.124 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:12:41.534 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:12:41.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:12:41.534 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:41.534 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:41.534 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2335173488, 0x0, 391868352) start. 17-03-18 04:12:41.544 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:12:41.544 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:12:41.544 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:41.544 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:41.544 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2370595752, 0x0, 418435064) start. 17-03-18 04:12:41.644 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:41.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:41.734 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37537 805 17-03-18 04:12:41.884 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:12:41.914 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2370595752, 0x0, 418435064) end. Duration was 374 ms. 17-03-18 04:12:41.914 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms. 17-03-18 04:12:41.914 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:41.914 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2335173488, 0x0, 391868352) end. Duration was 377 ms. 17-03-18 04:12:41.914 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 04:12:41.914 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:41.924 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:12:41.924 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:12:41.924 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 04:12:41.924 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 04:12:42.084 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:12:42.084 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:12:42.084 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:42.194 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:12:42.194 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:12:42.194 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:42.204 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:42.204 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-18 04:12:42.204 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:42.204 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:12:42.274 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:12:42.274 -07 000000447 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:12:42.274 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 37537 150' command took 2 ms to send, 1343 ms to get response, and 1351 ms overall 17-03-18 04:12:42.274 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.171292 17-03-18 04:12:42.274 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17129 mm 17-03-18 04:12:42.274 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:12:42.274 -07 000000474 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True) 17-03-18 04:12:42.274 -07 000000474 INF: Y Motor: Moving to 62.4026 mm, started at 61.5625 mm, delta = 0.8401 mm 17-03-18 04:12:42.274 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:42.274 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 37419, sync = True, waitForSettling = False) 17-03-18 04:12:42.274 -07 000000455 INF: Z Motor: Moving to -0.171293 mm, started at -0.171036 mm, distance = -0.26 um 17-03-18 04:12:42.284 -07 000000455 INF: FPGA: Xmit ZDACW 37419\n [Z Motor] 17-03-18 04:12:42.284 -07 000000479 INF: FPGA: Recv YRDPOS 126081 17-03-18 04:12:42.284 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 04:12:42.284 -07 000000474 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:42.284 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 04:12:42.284 -07 000000474 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:12:42.284 -07 000000474 INF: Y Motor: Moving 1343 steps-21 17-03-18 04:12:42.294 -07 000000455 INF: FPGA: 'ZDACW 37419' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 04:12:42.294 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:42.294 -07 000000512 INF: FPGA: Recv ZDACR 37419 17-03-18 04:12:42.304 -07 000000474 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:12:42.304 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:42.304 -07 000000455 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet)) 17-03-18 04:12:42.584 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 383 ms. 17-03-18 04:12:42.584 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 04:12:42.584 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:42.584 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 382 ms. 17-03-18 04:12:42.584 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms. 17-03-18 04:12:42.584 -07 000000012 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:42.594 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:12:42.594 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 509 ms. 17-03-18 04:12:42.594 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:12:42.604 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-18 04:12:42.674 -07 000000579 INF: FPGA: Recv YMVTILE 17-03-18 04:12:42.674 -07 000000474 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 391 ms overall 17-03-18 04:12:42.724 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:42.734 -07 000000480 INF: FPGA: Recv YRDPOS 127784 17-03-18 04:12:42.734 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 5 ms overall 17-03-18 04:12:42.734 -07 000000474 INF: Y Motor: Encoder = 127784 = motor step 99831.3 = 62.3945 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:42.734 -07 000000474 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm) 17-03-18 04:12:42.734 -07 000000474 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 391 ms, distance = 0.840 mm, average velocity = 2.149 mm/sec 17-03-18 04:12:43.394 -07 000000585 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.979922, 17-03-18 04:12:43.684 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:43.684 -07 000000447 INF: FPGA: Recv YRDPOS 127784 17-03-18 04:12:43.694 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.694 -07 000000474 INF: Y Motor: Encoder = 127784 = motor step 99831.3 = 62.3945 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:43.724 -07 000000474 INF: Y Motor: After move to 62.402607, error = -0.008076, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:12:43.724 -07 000000474 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:12:43.724 -07 000000474 INF: Y Motor: Moved to 62.3945 after 1442 ms (table move) 17-03-18 04:12:43.724 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171293 mm (DAC = 37419) 17-03-18 04:12:43.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:43.724 -07 000000437 INF: FPGA: Recv ZSGSRD 35948 17-03-18 04:12:43.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:12:43.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:43.734 -07 000000561 INF: FPGA: Recv ZSGSRD 35959 17-03-18 04:12:43.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:43.744 -07 000000455 INF: FPGA: Recv ZSGSRD 35956 17-03-18 04:12:43.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:43.754 -07 000000608 INF: FPGA: Recv ZSGSRD 35954 17-03-18 04:12:43.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:43.764 -07 000000512 INF: FPGA: Recv ZSGSRD 35951 17-03-18 04:12:43.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:43.774 -07 000000444 INF: FPGA: Recv ZSGSRD 35954 17-03-18 04:12:43.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:43.784 -07 000000447 INF: FPGA: Recv ZSGSRD 35953 17-03-18 04:12:43.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:43.794 -07 000000455 INF: FPGA: Recv ZSGSRD 35951 17-03-18 04:12:43.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:43.804 -07 000000447 INF: FPGA: Recv ZSGSRD 35957 17-03-18 04:12:43.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:43.814 -07 000000474 INF: FPGA: Recv ZSGSRD 35959 17-03-18 04:12:43.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.824 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:43.824 -07 000000444 INF: FPGA: Recv ZPIEZORD 31835 17-03-18 04:12:43.834 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.834 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.710 V. Piezo Error = -9.1 V. 17-03-18 04:12:43.834 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35954 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35954 (-170.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35948 (-170.4 uncal um), Max = 35959 (-170.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:12:43.834 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35954, posNoise = 5, negNoise = 6 17-03-18 04:12:43.834 -07 000000610 INF: Z Motor: After move to -0.171293, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:43.834 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 107 ms (allowed 150 ms), total time = 1551 ms 17-03-18 04:12:43.834 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:12:43.884 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms 17-03-18 04:12:43.884 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:12:43.884 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39453125, Z-position -0.171299475356008. ---------- 17-03-18 04:12:43.884 -07 000000610 INF: Cycle 122 Tile 4 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:12:43.884 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37242, sync = True, waitForSettling = True) 17-03-18 04:12:43.884 -07 000000610 INF: Z Motor: Moving to -0.170483 mm, started at -0.171299 mm, distance = 0.82 um 17-03-18 04:12:43.884 -07 000000610 INF: FPGA: Xmit ZDACW 37242\n [Z Motor] 17-03-18 04:12:43.884 -07 000000012 INF: FPGA: Recv ZDACW 17-03-18 04:12:43.894 -07 000000610 INF: FPGA: 'ZDACW 37242' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:12:43.894 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:43.894 -07 000000590 INF: FPGA: Recv ZDACR 37242 17-03-18 04:12:43.904 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:43.904 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:12:44.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:44.054 -07 000000625 INF: FPGA: Recv ZSGSRD 35832 17-03-18 04:12:44.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:44.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:44.064 -07 000000480 INF: FPGA: Recv ZSGSRD 35836 17-03-18 04:12:44.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:44.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:44.094 -07 000000579 INF: FPGA: Recv ZSGSRD 35828 17-03-18 04:12:44.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 04:12:44.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:44.104 -07 000000012 INF: FPGA: Recv ZSGSRD 35830 17-03-18 04:12:44.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:44.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:44.114 -07 000000618 INF: FPGA: Recv ZSGSRD 35828 17-03-18 04:12:44.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:44.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:44.124 -07 000000479 INF: FPGA: Recv ZSGSRD 35827 17-03-18 04:12:44.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:44.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:44.134 -07 000000618 INF: FPGA: Recv ZSGSRD 35832 17-03-18 04:12:44.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:44.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:44.144 -07 000000590 INF: FPGA: Recv ZSGSRD 35829 17-03-18 04:12:44.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:44.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:44.154 -07 000000512 INF: FPGA: Recv ZSGSRD 35830 17-03-18 04:12:44.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:44.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:44.164 -07 000000012 INF: FPGA: Recv ZSGSRD 35831 17-03-18 04:12:44.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:44.174 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:44.174 -07 000000618 INF: FPGA: Recv ZPIEZORD 31639 17-03-18 04:12:44.184 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:44.184 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.683 V. Piezo Error = -9.2 V. 17-03-18 04:12:44.184 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35830 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35830 (-169.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35827 (-169.6 uncal um), Max = 35836 (-169.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 04:12:44.184 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35830, posNoise = 6, negNoise = 3 17-03-18 04:12:44.184 -07 000000610 INF: Z Motor: After move to -0.170483, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:44.184 -07 000000610 INF: Z Motor: MoveAbsStepped took 294 ms) 17-03-18 04:12:44.184 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:12:44.184 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:12:44.184 -07 000000625 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:12:44.184 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:12:44.184 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:12:44.184 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:12:44.184 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:12:44.184 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:12:44.184 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:12:44.184 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:12:44.184 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:12:44.184 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:12:44.194 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:12:44.194 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:12:44.194 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:12:44.194 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:12:44.204 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-18 04:12:44.204 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:12:44.204 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-18 04:12:44.204 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:12:44.204 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 37419 150\n [Camera] 17-03-18 04:12:44.404 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:12:44.824 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:12:44.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:12:44.824 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:44.824 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:12:44.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:12:44.834 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:44.834 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:44.834 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:12:44.834 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:44.834 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 04:12:45.014 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37419 802 17-03-18 04:12:45.164 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:12:45.204 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 371 ms. 17-03-18 04:12:45.204 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms. 17-03-18 04:12:45.204 -07 000000608 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:45.204 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:45.204 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 04:12:45.204 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 371 ms. 17-03-18 04:12:45.204 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 04:12:45.204 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:45.214 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:12:45.224 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 04:12:45.364 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:12:45.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:12:45.374 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:45.374 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:45.374 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) start. 17-03-18 04:12:45.374 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:12:45.374 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:12:45.374 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:45.494 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:45.494 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start. 17-03-18 04:12:45.564 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:12:45.564 -07 000000479 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:12:45.564 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 37419 150' command took 2 ms to send, 1340 ms to get response, and 1351 ms overall 17-03-18 04:12:45.564 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 04:12:45.564 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 5 at Y-position 62.39453125, Z-Position -0.17050287305043. ------ 17-03-18 04:12:45.564 -07 000000487 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17707 mm 17-03-18 04:12:45.564 -07 000000487 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:12:45.564 -07 000000012 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:12:45.564 -07 000000585 INF: Z Motor: Entering MoveAbsStepped (DAC = 38681, sync = True, waitForSettling = False) 17-03-18 04:12:45.564 -07 000000585 INF: Z Motor: Moving to -0.177070 mm, started at -0.170503 mm, distance = -6.57 um 17-03-18 04:12:45.564 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True) 17-03-18 04:12:45.564 -07 000000455 INF: Y Motor: Moving to 63.2326 mm, started at 62.3945 mm, delta = 0.8381 mm 17-03-18 04:12:45.574 -07 000000480 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:12:45.574 -07 000000012 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:12:45.574 -07 000000585 INF: FPGA: Xmit ZDACW 38681\n [Z Motor] 17-03-18 04:12:45.574 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 04:12:45.584 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:45.584 -07 000000585 INF: FPGA: 'ZDACW 38681' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 04:12:45.584 -07 000000437 INF: FPGA: Recv YRDPOS 127784 17-03-18 04:12:45.594 -07 000000012 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 04:12:45.594 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 20 ms overall 17-03-18 04:12:45.594 -07 000000455 INF: Y Motor: Encoder = 127784 = motor step 99831.3 = 62.3945 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:45.594 -07 000000455 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:12:45.594 -07 000000455 INF: Y Motor: Moving 1341 steps-17 17-03-18 04:12:45.604 -07 000000585 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:45.604 -07 000000626 INF: FPGA: Recv ZDACR 38681 17-03-18 04:12:45.614 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:12:45.614 -07 000000585 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 04:12:45.614 -07 000000585 INF: Z Motor: MoveAbsStepped took 41 ms (did NOT wait for settling yet)) 17-03-18 04:12:45.754 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 04:12:45.754 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 04:12:45.754 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:45.754 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:45.754 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 04:12:45.794 -07 000000625 INF: FPGA: Recv FOCMRRFOC 17-03-18 04:12:45.794 -07 000000012 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall 17-03-18 04:12:45.864 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 373 ms. 17-03-18 04:12:45.864 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms. 17-03-18 04:12:45.864 -07 000000579 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:45.874 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:45.874 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 503 ms. 17-03-18 04:12:45.984 -07 000000501 INF: FPGA: Recv YMVTILE 17-03-18 04:12:45.984 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 04:12:46.034 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:46.044 -07 000000590 INF: FPGA: Recv YRDPOS 129480 17-03-18 04:12:46.044 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 04:12:46.044 -07 000000455 INF: Y Motor: Encoder = 129480 = motor step 101156.3 = 63.2227 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:46.044 -07 000000455 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm) 17-03-18 04:12:46.044 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.111 mm/sec 17-03-18 04:12:46.644 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:46.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:46.994 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:46.994 -07 000000512 INF: FPGA: Recv YRDPOS 129480 17-03-18 04:12:47.004 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.004 -07 000000455 INF: Y Motor: Encoder = 129480 = motor step 101156.3 = 63.2227 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:47.024 -07 000000455 INF: Y Motor: After move to 63.232609, error = -0.009953, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:12:47.024 -07 000000455 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:12:47.024 -07 000000455 INF: Y Motor: Moved to 63.2227 after 1460 ms (table move) 17-03-18 04:12:47.034 -07 000000487 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177070 mm (DAC = 38681) 17-03-18 04:12:47.034 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:47.034 -07 000000479 INF: FPGA: Recv ZSGSRD 36864 17-03-18 04:12:47.044 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:12:47.044 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:47.044 -07 000000625 INF: FPGA: Recv ZSGSRD 36858 17-03-18 04:12:47.054 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.054 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:47.054 -07 000000579 INF: FPGA: Recv ZSGSRD 36858 17-03-18 04:12:47.064 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.064 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:47.064 -07 000000611 INF: FPGA: Recv ZSGSRD 36853 17-03-18 04:12:47.074 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.074 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:47.074 -07 000000447 INF: FPGA: Recv ZSGSRD 36862 17-03-18 04:12:47.084 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.084 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:47.084 -07 000000437 INF: FPGA: Recv ZSGSRD 36857 17-03-18 04:12:47.094 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.094 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:47.094 -07 000000561 INF: FPGA: Recv ZSGSRD 36848 17-03-18 04:12:47.104 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.104 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:47.104 -07 000000579 INF: FPGA: Recv ZSGSRD 36845 17-03-18 04:12:47.114 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.114 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:47.114 -07 000000444 INF: FPGA: Recv ZSGSRD 36850 17-03-18 04:12:47.124 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.124 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:47.124 -07 000000608 INF: FPGA: Recv ZSGSRD 36855 17-03-18 04:12:47.134 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.134 -07 000000487 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:47.134 -07 000000438 INF: FPGA: Recv ZPIEZORD 33012 17-03-18 04:12:47.144 -07 000000487 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.144 -07 000000487 INF: Z Motor: Piezo is near 50.5 V (nominally 0 to 100 V), expect near 59.0 V, since DAC is at 5.902 V. Piezo Error = -8.5 V. 17-03-18 04:12:47.144 -07 000000487 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.1 um, Read 10 ADC samples: Avg = 36855 (-176.2 uncal um), Error = 0.9 uncal um, Median = 36856 (-176.2 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 36845 (-176.1 uncal um), Max = 36864 (-176.3 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-18 04:12:47.144 -07 000000487 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36855, posNoise = 9, negNoise = 10 17-03-18 04:12:47.144 -07 000000487 INF: Z Motor: After move to -0.177070, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:47.144 -07 000000487 INF: Z Motor: Settle wait time = 1464 ms, measure time = 107 ms (allowed 150 ms), total time = 1571 ms 17-03-18 04:12:47.144 -07 000000487 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:12:47.194 -07 000000487 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1623 ms 17-03-18 04:12:47.194 -07 000000487 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:12:47.194 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:12:47.194 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:12:47.194 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:12:47.194 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 04:12:47.194 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:12:47.194 -07 000000585 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:12:47.194 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:12:47.194 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 04:12:47.204 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 04:12:47.204 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 04:12:47.214 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-18 04:12:47.214 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms. 17-03-18 04:12:47.214 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 04:12:47.264 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 04:12:47.564 -07 000000438 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 04:12:47.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 04:12:47.564 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 04:12:47.564 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) start. 17-03-18 04:12:47.604 -07 000000625 INF: FPGA: Recv @CAMSNAP 380 17-03-18 04:12:47.604 -07 000000501 INF: FPGA: Recv CAMSNAP 17-03-18 04:12:47.604 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 385 ms overall 17-03-18 04:12:47.694 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 04:12:47.694 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:47.694 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 04:12:47.694 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 04:12:47.704 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:12:47.704 -07 000000487 INF: Autofocus start 17-03-18 04:12:47.704 -07 000000487 INF: MeasureProfile start 17-03-18 04:12:47.704 -07 000000455 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:12:47.714 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:12:47.714 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 04:12:47.714 -07 000000487 INF: MeasureProfile done 17-03-18 04:12:47.714 -07 000000487 INF: X=16 Z correction [um]=0.01042744 17-03-18 04:12:47.714 -07 000000487 INF: Autofocus finished 17-03-18 04:12:47.914 -07 000000561 INF: FPGA: Recv FOCMRRIMG 17-03-18 04:12:47.914 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall 17-03-18 04:12:47.914 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22265625, Z-position -0.177087690495735. ---------- 17-03-18 04:12:47.914 -07 000000610 INF: Cycle 122 Tile 5 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:12:47.924 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37196, sync = True, waitForSettling = True) 17-03-18 04:12:47.924 -07 000000610 INF: Z Motor: Moving to -0.170272 mm, started at -0.177088 mm, distance = 6.82 um 17-03-18 04:12:47.924 -07 000000610 INF: FPGA: Xmit ZDACW 37196\n [Z Motor] 17-03-18 04:12:47.924 -07 000000479 INF: FPGA: Recv ZDACW 17-03-18 04:12:47.934 -07 000000610 INF: FPGA: 'ZDACW 37196' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:12:47.934 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:47.934 -07 000000561 INF: FPGA: Recv ZDACR 37196 17-03-18 04:12:47.944 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:47.944 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:12:48.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:48.094 -07 000000444 INF: FPGA: Recv ZSGSRD 35798 17-03-18 04:12:48.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:48.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:48.104 -07 000000618 INF: FPGA: Recv ZSGSRD 35800 17-03-18 04:12:48.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:48.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:48.114 -07 000000590 INF: FPGA: Recv ZSGSRD 35796 17-03-18 04:12:48.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:48.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:48.124 -07 000000618 INF: FPGA: Recv ZSGSRD 35794 17-03-18 04:12:48.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:48.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:48.134 -07 000000444 INF: FPGA: Recv ZSGSRD 35793 17-03-18 04:12:48.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:48.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:48.144 -07 000000579 INF: FPGA: Recv ZSGSRD 35796 17-03-18 04:12:48.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:48.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:48.154 -07 000000561 INF: FPGA: Recv ZSGSRD 35798 17-03-18 04:12:48.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:48.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:48.164 -07 000000455 INF: FPGA: Recv ZSGSRD 35795 17-03-18 04:12:48.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:48.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:48.174 -07 000000501 INF: FPGA: Recv ZSGSRD 35796 17-03-18 04:12:48.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:48.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:48.184 -07 000000455 INF: FPGA: Recv ZSGSRD 35797 17-03-18 04:12:48.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:48.194 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:48.194 -07 000000479 INF: FPGA: Recv ZPIEZORD 31563 17-03-18 04:12:48.204 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:48.204 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.676 V. Piezo Error = -9.3 V. 17-03-18 04:12:48.204 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.3 um, Read 10 ADC samples: Avg = 35796 (-169.4 uncal um), Error = 0.9 uncal um, Median = 35796 (-169.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35793 (-169.4 uncal um), Max = 35800 (-169.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 04:12:48.204 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35796, posNoise = 4, negNoise = 3 17-03-18 04:12:48.204 -07 000000610 INF: Z Motor: After move to -0.170272, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:48.204 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-18 04:12:48.204 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:12:48.204 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:12:48.204 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:12:48.204 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:12:48.204 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:12:48.204 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:12:48.204 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:12:48.204 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:12:48.204 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:12:48.204 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:12:48.204 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:12:48.204 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:12:48.214 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 04:12:48.214 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:12:48.214 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 5 ms. 17-03-18 04:12:48.214 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:12:48.224 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 04:12:48.224 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 04:12:48.224 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 04:12:48.224 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms. 17-03-18 04:12:48.234 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 37373 150\n [Camera] 17-03-18 04:12:48.424 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:12:48.754 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.005817, 17-03-18 04:12:48.844 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:12:48.844 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:12:48.844 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:48.854 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:12:48.854 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:12:48.854 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:48.854 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:48.854 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:12:48.854 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:48.854 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 04:12:49.034 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37373 802 17-03-18 04:12:49.184 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:12:49.224 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 04:12:49.224 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 04:12:49.224 -07 000000579 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:49.224 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 370 ms. 17-03-18 04:12:49.224 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms. 17-03-18 04:12:49.224 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:49.234 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:12:49.234 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 04:12:49.234 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:12:49.234 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 04:12:49.384 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:12:49.394 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:12:49.394 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:49.394 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:12:49.394 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:12:49.394 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:49.394 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) start. 17-03-18 04:12:49.394 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:49.394 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:49.394 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) start. 17-03-18 04:12:49.584 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:12:49.584 -07 000000608 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:12:49.584 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 37373 150' command took 2 ms to send, 1341 ms to get response, and 1352 ms overall 17-03-18 04:12:49.584 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.170355 17-03-18 04:12:49.584 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17035 mm 17-03-18 04:12:49.584 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:12:49.584 -07 000000625 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True) 17-03-18 04:12:49.584 -07 000000625 INF: Y Motor: Moving to 64.0626 mm, started at 63.2227 mm, delta = 0.8400 mm 17-03-18 04:12:49.584 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:49.584 -07 000000474 INF: Z Motor: Entering MoveAbsStepped (DAC = 37214, sync = True, waitForSettling = False) 17-03-18 04:12:49.584 -07 000000474 INF: Z Motor: Moving to -0.170355 mm, started at -0.170284 mm, distance = -0.07 um 17-03-18 04:12:49.584 -07 000000626 INF: FPGA: Recv YRDPOS 129481 17-03-18 04:12:49.594 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:12:49.594 -07 000000625 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:49.594 -07 000000474 INF: FPGA: Xmit ZDACW 37214\n [Z Motor] 17-03-18 04:12:49.594 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 04:12:49.594 -07 000000625 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:12:49.594 -07 000000625 INF: Y Motor: Moving 1343 steps-20 17-03-18 04:12:49.604 -07 000000474 INF: FPGA: 'ZDACW 37214' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 04:12:49.604 -07 000000474 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:49.604 -07 000000626 INF: FPGA: Recv ZDACR 37214 17-03-18 04:12:49.614 -07 000000625 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:12:49.614 -07 000000474 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:49.614 -07 000000474 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet)) 17-03-18 04:12:49.774 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) end. Duration was 381 ms. 17-03-18 04:12:49.774 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms. 17-03-18 04:12:49.774 -07 000000012 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:49.774 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) end. Duration was 384 ms. 17-03-18 04:12:49.774 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 04:12:49.774 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:49.784 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:49.784 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:12:49.784 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 04:12:49.784 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-18 04:12:49.984 -07 000000455 INF: FPGA: Recv YMVTILE 17-03-18 04:12:49.984 -07 000000625 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall 17-03-18 04:12:50.034 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:50.044 -07 000000561 INF: FPGA: Recv YRDPOS 131186 17-03-18 04:12:50.044 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:12:50.044 -07 000000625 INF: Y Motor: Encoder = 131186 = motor step 102489.1 = 64.0557 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:50.044 -07 000000625 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm) 17-03-18 04:12:50.044 -07 000000625 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.840 mm, average velocity = 2.132 mm/sec 17-03-18 04:12:50.994 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:50.994 -07 000000501 INF: FPGA: Recv YRDPOS 131186 17-03-18 04:12:51.004 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:51.004 -07 000000625 INF: Y Motor: Encoder = 131186 = motor step 102489.1 = 64.0557 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:51.024 -07 000000625 INF: Y Motor: After move to 64.062607, error = -0.006943, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:12:51.024 -07 000000625 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:12:51.024 -07 000000625 INF: Y Motor: Moved to 64.0557 after 1442 ms (table move) 17-03-18 04:12:51.034 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170355 mm (DAC = 37214) 17-03-18 04:12:51.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.034 -07 000000561 INF: FPGA: Recv ZSGSRD 35813 17-03-18 04:12:51.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:12:51.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.044 -07 000000625 INF: FPGA: Recv ZSGSRD 35811 17-03-18 04:12:51.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.054 -07 000000579 INF: FPGA: Recv ZSGSRD 35811 17-03-18 04:12:51.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.064 -07 000000608 INF: FPGA: Recv ZSGSRD 35812 17-03-18 04:12:51.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.074 -07 000000626 INF: FPGA: Recv ZSGSRD 35811 17-03-18 04:12:51.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.084 -07 000000444 INF: FPGA: Recv ZSGSRD 35809 17-03-18 04:12:51.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.094 -07 000000437 INF: FPGA: Recv ZSGSRD 35808 17-03-18 04:12:51.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.104 -07 000000512 INF: FPGA: Recv ZSGSRD 35807 17-03-18 04:12:51.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.114 -07 000000501 INF: FPGA: Recv ZSGSRD 35809 17-03-18 04:12:51.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.124 -07 000000012 INF: FPGA: Recv ZSGSRD 35814 17-03-18 04:12:51.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.134 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:51.134 -07 000000611 INF: FPGA: Recv ZPIEZORD 31571 17-03-18 04:12:51.144 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.144 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.678 V. Piezo Error = -9.3 V. 17-03-18 04:12:51.144 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35810 (-169.5 uncal um), Error = 0.9 uncal um, Median = 35811 (-169.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35807 (-169.5 uncal um), Max = 35814 (-169.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 04:12:51.144 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35810, posNoise = 4, negNoise = 3 17-03-18 04:12:51.144 -07 000000610 INF: Z Motor: After move to -0.170355, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:51.144 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 107 ms (allowed 150 ms), total time = 1553 ms 17-03-18 04:12:51.144 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:12:51.194 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms 17-03-18 04:12:51.194 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:12:51.194 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.0556640625, Z-position -0.170374388807595. ---------- 17-03-18 04:12:51.194 -07 000000610 INF: Cycle 122 Tile 6 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:12:51.194 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37037, sync = True, waitForSettling = True) 17-03-18 04:12:51.194 -07 000000610 INF: Z Motor: Moving to -0.169545 mm, started at -0.170374 mm, distance = 0.83 um 17-03-18 04:12:51.194 -07 000000610 INF: FPGA: Xmit ZDACW 37037\n [Z Motor] 17-03-18 04:12:51.194 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 04:12:51.204 -07 000000610 INF: FPGA: 'ZDACW 37037' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:12:51.204 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:51.204 -07 000000512 INF: FPGA: Recv ZDACR 37037 17-03-18 04:12:51.214 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:12:51.214 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:12:51.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.364 -07 000000444 INF: FPGA: Recv ZSGSRD 35687 17-03-18 04:12:51.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:51.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.374 -07 000000437 INF: FPGA: Recv ZSGSRD 35685 17-03-18 04:12:51.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.384 -07 000000618 INF: FPGA: Recv ZSGSRD 35681 17-03-18 04:12:51.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.394 -07 000000487 INF: FPGA: Recv ZSGSRD 35683 17-03-18 04:12:51.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.404 -07 000000479 INF: FPGA: Recv ZSGSRD 35678 17-03-18 04:12:51.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.414 -07 000000625 INF: FPGA: Recv ZSGSRD 35679 17-03-18 04:12:51.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.424 -07 000000618 INF: FPGA: Recv ZSGSRD 35677 17-03-18 04:12:51.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.434 -07 000000561 INF: FPGA: Recv ZSGSRD 35678 17-03-18 04:12:51.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.444 -07 000000447 INF: FPGA: Recv ZSGSRD 35683 17-03-18 04:12:51.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:51.454 -07 000000474 INF: FPGA: Recv ZSGSRD 35683 17-03-18 04:12:51.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.464 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:51.464 -07 000000501 INF: FPGA: Recv ZPIEZORD 31403 17-03-18 04:12:51.474 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:51.474 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.651 V. Piezo Error = -9.4 V. 17-03-18 04:12:51.474 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.5 um, Read 10 ADC samples: Avg = 35681 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35682 (-168.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35677 (-168.6 uncal um), Max = 35687 (-168.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 04:12:51.474 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35681, posNoise = 6, negNoise = 4 17-03-18 04:12:51.474 -07 000000610 INF: Z Motor: After move to -0.169545, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:51.474 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:12:51.474 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:12:51.474 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:12:51.474 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:12:51.474 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:12:51.474 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:12:51.474 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:12:51.474 -07 000000479 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:12:51.474 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:12:51.474 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 04:12:51.474 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 04:12:51.474 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:12:51.474 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:12:51.484 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:12:51.484 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:12:51.484 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:12:51.484 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:12:51.494 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms. 17-03-18 04:12:51.494 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:12:51.494 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms. 17-03-18 04:12:51.494 -07 000000479 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:12:51.494 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 37214 150\n [Camera] 17-03-18 04:12:51.644 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:51.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:51.694 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:12:52.114 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:12:52.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:12:52.114 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:52.114 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:52.114 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start. 17-03-18 04:12:52.114 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:12:52.114 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:12:52.114 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:52.114 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:52.114 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start. 17-03-18 04:12:52.304 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37214 802 17-03-18 04:12:52.454 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:12:52.494 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 04:12:52.494 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 04:12:52.494 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:52.494 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 377 ms. 17-03-18 04:12:52.494 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 04:12:52.494 -07 000000438 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:52.494 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:12:52.494 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:12:52.494 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 04:12:52.504 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms. 17-03-18 04:12:52.654 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:12:52.654 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:12:52.654 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:52.654 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:52.664 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start. 17-03-18 04:12:52.664 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:12:52.664 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:12:52.664 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:52.664 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:52.664 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start. 17-03-18 04:12:52.844 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:12:52.844 -07 000000444 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:12:52.854 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 37214 150' command took 2 ms to send, 1339 ms to get response, and 1351 ms overall 17-03-18 04:12:52.854 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.169951 17-03-18 04:12:52.854 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.16995 mm 17-03-18 04:12:52.854 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:12:52.854 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True) 17-03-18 04:12:52.854 -07 000000611 INF: Y Motor: Moving to 64.8926 mm, started at 64.0557 mm, delta = 0.8369 mm 17-03-18 04:12:52.854 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:52.854 -07 000000479 INF: Z Motor: Entering MoveAbsStepped (DAC = 37126, sync = True, waitForSettling = False) 17-03-18 04:12:52.854 -07 000000479 INF: Z Motor: Moving to -0.169952 mm, started at -0.169546 mm, distance = -0.41 um 17-03-18 04:12:52.854 -07 000000512 INF: FPGA: Recv YRDPOS 131186 17-03-18 04:12:52.864 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:12:52.864 -07 000000611 INF: Y Motor: Encoder = 131186 = motor step 102489.1 = 64.0557 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:52.864 -07 000000611 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:12:52.864 -07 000000611 INF: Y Motor: Moving 1339 steps-14 17-03-18 04:12:52.864 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:12:52.874 -07 000000479 INF: FPGA: Xmit ZDACW 37126\n [Z Motor] 17-03-18 04:12:52.874 -07 000000438 INF: FPGA: Recv ZDACW 17-03-18 04:12:52.884 -07 000000479 INF: FPGA: 'ZDACW 37126' command took 0 ms to send, 0 ms to get response, and 25 ms overall 17-03-18 04:12:52.884 -07 000000479 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:52.884 -07 000000444 INF: FPGA: Recv ZDACR 37126 17-03-18 04:12:52.894 -07 000000479 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:52.894 -07 000000479 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet)) 17-03-18 04:12:53.034 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 04:12:53.034 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 04:12:53.034 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:53.044 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:53.044 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 381 ms. 17-03-18 04:12:53.044 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 04:12:53.044 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:53.044 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:53.044 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 04:12:53.044 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 04:12:53.234 -07 000000487 INF: FPGA: Recv YMVTILE 17-03-18 04:12:53.234 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall 17-03-18 04:12:53.284 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:53.294 -07 000000437 INF: FPGA: Recv YRDPOS 132869 17-03-18 04:12:53.294 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:12:53.294 -07 000000611 INF: Y Motor: Encoder = 132869 = motor step 103803.9 = 64.8774 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:53.294 -07 000000611 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 04:12:53.294 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.837 mm, average velocity = 2.214 mm/sec 17-03-18 04:12:54.114 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.007176, 17-03-18 04:12:54.244 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:54.244 -07 000000585 INF: FPGA: Recv YRDPOS 132869 17-03-18 04:12:54.254 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:54.254 -07 000000611 INF: Y Motor: Encoder = 132869 = motor step 103803.9 = 64.8774 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:54.284 -07 000000611 INF: Y Motor: After move to 64.892609, error = -0.015167, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:12:54.284 -07 000000611 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:12:54.284 -07 000000611 INF: Y Motor: Moved to 64.8774 after 1427 ms (table move) 17-03-18 04:12:54.284 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169952 mm (DAC = 37126) 17-03-18 04:12:54.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.284 -07 000000626 INF: FPGA: Recv ZSGSRD 35750 17-03-18 04:12:54.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:12:54.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.294 -07 000000585 INF: FPGA: Recv ZSGSRD 35748 17-03-18 04:12:54.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.304 -07 000000455 INF: FPGA: Recv ZSGSRD 35754 17-03-18 04:12:54.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.314 -07 000000501 INF: FPGA: Recv ZSGSRD 35748 17-03-18 04:12:54.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.324 -07 000000611 INF: FPGA: Recv ZSGSRD 35748 17-03-18 04:12:54.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.334 -07 000000512 INF: FPGA: Recv ZSGSRD 35750 17-03-18 04:12:54.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.344 -07 000000487 INF: FPGA: Recv ZSGSRD 35741 17-03-18 04:12:54.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.354 -07 000000012 INF: FPGA: Recv ZSGSRD 35746 17-03-18 04:12:54.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.364 -07 000000501 INF: FPGA: Recv ZSGSRD 35744 17-03-18 04:12:54.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.374 -07 000000618 INF: FPGA: Recv ZSGSRD 35756 17-03-18 04:12:54.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.384 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:54.384 -07 000000590 INF: FPGA: Recv ZPIEZORD 31544 17-03-18 04:12:54.394 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.394 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.665 V. Piezo Error = -9.3 V. 17-03-18 04:12:54.394 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35748 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35748 (-169.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35741 (-169.1 uncal um), Max = 35756 (-169.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:12:54.394 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35748, posNoise = 8, negNoise = 7 17-03-18 04:12:54.394 -07 000000610 INF: Z Motor: After move to -0.169952, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:54.394 -07 000000610 INF: Z Motor: Settle wait time = 1429 ms, measure time = 107 ms (allowed 150 ms), total time = 1536 ms 17-03-18 04:12:54.394 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:12:54.444 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1587 ms 17-03-18 04:12:54.444 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:12:54.444 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87744140625, Z-position -0.169976087654806. ---------- 17-03-18 04:12:54.444 -07 000000610 INF: Cycle 122 Tile 7 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:12:54.444 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36949, sync = True, waitForSettling = True) 17-03-18 04:12:54.444 -07 000000610 INF: Z Motor: Moving to -0.169142 mm, started at -0.169976 mm, distance = 0.83 um 17-03-18 04:12:54.444 -07 000000610 INF: FPGA: Xmit ZDACW 36949\n [Z Motor] 17-03-18 04:12:54.444 -07 000000479 INF: FPGA: Recv ZDACW 17-03-18 04:12:54.454 -07 000000610 INF: FPGA: 'ZDACW 36949' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:12:54.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:54.464 -07 000000437 INF: FPGA: Recv ZDACR 36949 17-03-18 04:12:54.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:12:54.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:12:54.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.624 -07 000000590 INF: FPGA: Recv ZSGSRD 35620 17-03-18 04:12:54.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:54.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.634 -07 000000501 INF: FPGA: Recv ZSGSRD 35614 17-03-18 04:12:54.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.644 -07 000000444 INF: FPGA: Recv ZSGSRD 35618 17-03-18 04:12:54.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.654 -07 000000625 INF: FPGA: Recv ZSGSRD 35617 17-03-18 04:12:54.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.664 -07 000000455 INF: FPGA: Recv ZSGSRD 35614 17-03-18 04:12:54.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.674 -07 000000012 INF: FPGA: Recv ZSGSRD 35617 17-03-18 04:12:54.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.684 -07 000000447 INF: FPGA: Recv ZSGSRD 35625 17-03-18 04:12:54.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.694 -07 000000512 INF: FPGA: Recv ZSGSRD 35623 17-03-18 04:12:54.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.704 -07 000000585 INF: FPGA: Recv ZSGSRD 35627 17-03-18 04:12:54.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:54.714 -07 000000512 INF: FPGA: Recv ZSGSRD 35617 17-03-18 04:12:54.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:54.724 -07 000000447 INF: FPGA: Recv ZPIEZORD 31348 17-03-18 04:12:54.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:54.734 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.638 V. Piezo Error = -9.4 V. 17-03-18 04:12:54.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35619 (-168.3 uncal um), Error = 0.9 uncal um, Median = 35618 (-168.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35614 (-168.2 uncal um), Max = 35627 (-168.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:12:54.734 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35619, posNoise = 8, negNoise = 5 17-03-18 04:12:54.734 -07 000000610 INF: Z Motor: After move to -0.169142, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:54.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 284 ms) 17-03-18 04:12:54.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:12:54.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:12:54.734 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:12:54.734 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:12:54.734 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:12:54.734 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:12:54.734 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:12:54.734 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:12:54.734 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:12:54.734 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:12:54.734 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:12:54.734 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:12:54.734 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:12:54.734 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:12:54.744 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-18 04:12:54.744 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:12:54.754 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 04:12:54.754 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:12:54.754 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 04:12:54.754 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 04:12:54.754 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 37126 150\n [Camera] 17-03-18 04:12:54.954 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:12:55.374 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:12:55.374 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:12:55.374 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:55.374 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:12:55.374 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:12:55.384 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:55.384 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:55.384 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-18 04:12:55.384 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:55.384 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:12:55.574 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37126 804 17-03-18 04:12:55.714 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:12:55.774 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 392 ms. 17-03-18 04:12:55.774 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 04:12:55.774 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:55.774 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 391 ms. 17-03-18 04:12:55.774 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 04:12:55.774 -07 000000438 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:55.774 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:55.774 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-18 04:12:55.784 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:55.784 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms. 17-03-18 04:12:55.914 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:12:55.914 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:12:55.924 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:55.924 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:12:55.924 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:12:55.924 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:55.924 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:55.924 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) start. 17-03-18 04:12:55.924 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:55.924 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:12:56.114 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:12:56.114 -07 000000447 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:12:56.114 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 37126 150' command took 2 ms to send, 1341 ms to get response, and 1351 ms overall 17-03-18 04:12:56.114 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.169697 17-03-18 04:12:56.114 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.16970 mm 17-03-18 04:12:56.114 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:12:56.114 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True) 17-03-18 04:12:56.114 -07 000000561 INF: Y Motor: Moving to 65.7226 mm, started at 64.8774 mm, delta = 0.8452 mm 17-03-18 04:12:56.114 -07 000000625 INF: Z Motor: Entering MoveAbsStepped (DAC = 37070, sync = True, waitForSettling = False) 17-03-18 04:12:56.114 -07 000000625 INF: Z Motor: Moving to -0.169696 mm, started at -0.169147 mm, distance = -0.55 um 17-03-18 04:12:56.114 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:56.114 -07 000000480 INF: FPGA: Recv YRDPOS 132870 17-03-18 04:12:56.124 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:12:56.124 -07 000000625 INF: FPGA: Xmit ZDACW 37070\n [Z Motor] 17-03-18 04:12:56.124 -07 000000561 INF: Y Motor: Encoder = 132870 = motor step 103804.7 = 64.8779 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:56.124 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 04:12:56.124 -07 000000561 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:12:56.124 -07 000000561 INF: Y Motor: Moving 1351 steps-31 17-03-18 04:12:56.134 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:12:56.134 -07 000000625 INF: FPGA: 'ZDACW 37070' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 04:12:56.144 -07 000000625 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:56.144 -07 000000487 INF: FPGA: Recv ZDACR 37070 17-03-18 04:12:56.154 -07 000000625 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:12:56.154 -07 000000625 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet)) 17-03-18 04:12:56.304 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 04:12:56.304 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 04:12:56.304 -07 000000012 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:56.304 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 377 ms. 17-03-18 04:12:56.304 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms. 17-03-18 04:12:56.304 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:56.304 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:12:56.304 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:12:56.304 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 04:12:56.314 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-18 04:12:56.514 -07 000000438 INF: FPGA: Recv YMVTILE 17-03-18 04:12:56.514 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 386 ms overall 17-03-18 04:12:56.554 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:56.564 -07 000000579 INF: FPGA: Recv YRDPOS 134580 17-03-18 04:12:56.574 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:56.574 -07 000000561 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:56.574 -07 000000561 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm) 17-03-18 04:12:56.574 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.845 mm, average velocity = 2.190 mm/sec 17-03-18 04:12:56.644 -07 000000474 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:12:56.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:12:57.524 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:57.524 -07 000000455 INF: FPGA: Recv YRDPOS 134580 17-03-18 04:12:57.534 -07 000000561 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:57.534 -07 000000561 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:57.564 -07 000000561 INF: Y Motor: After move to 65.722610, error = -0.009720, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:12:57.564 -07 000000561 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:12:57.564 -07 000000561 INF: Y Motor: Moved to 65.7129 after 1452 ms (table move) 17-03-18 04:12:57.574 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169696 mm (DAC = 37070) 17-03-18 04:12:57.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.574 -07 000000579 INF: FPGA: Recv ZSGSRD 35697 17-03-18 04:12:57.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:12:57.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.584 -07 000000455 INF: FPGA: Recv ZSGSRD 35704 17-03-18 04:12:57.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.594 -07 000000437 INF: FPGA: Recv ZSGSRD 35711 17-03-18 04:12:57.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.604 -07 000000444 INF: FPGA: Recv ZSGSRD 35705 17-03-18 04:12:57.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.614 -07 000000437 INF: FPGA: Recv ZSGSRD 35709 17-03-18 04:12:57.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.624 -07 000000444 INF: FPGA: Recv ZSGSRD 35702 17-03-18 04:12:57.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.634 -07 000000611 INF: FPGA: Recv ZSGSRD 35706 17-03-18 04:12:57.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.644 -07 000000561 INF: FPGA: Recv ZSGSRD 35701 17-03-18 04:12:57.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.654 -07 000000618 INF: FPGA: Recv ZSGSRD 35697 17-03-18 04:12:57.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.664 -07 000000512 INF: FPGA: Recv ZSGSRD 35706 17-03-18 04:12:57.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.674 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:57.674 -07 000000012 INF: FPGA: Recv ZPIEZORD 31459 17-03-18 04:12:57.684 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.684 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.657 V. Piezo Error = -9.4 V. 17-03-18 04:12:57.684 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.7 um, Read 10 ADC samples: Avg = 35704 (-168.8 uncal um), Error = 0.9 uncal um, Median = 35704 (-168.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35697 (-168.8 uncal um), Max = 35711 (-168.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:12:57.684 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35704, posNoise = 7, negNoise = 7 17-03-18 04:12:57.684 -07 000000610 INF: Z Motor: After move to -0.169696, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:57.684 -07 000000610 INF: Z Motor: Settle wait time = 1454 ms, measure time = 110 ms (allowed 150 ms), total time = 1564 ms 17-03-18 04:12:57.684 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms 17-03-18 04:12:57.724 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms 17-03-18 04:12:57.724 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:12:57.724 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.712890625, Z-position -0.169693422320568. ---------- 17-03-18 04:12:57.724 -07 000000610 INF: Cycle 122 Tile 8 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:12:57.724 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36894, sync = True, waitForSettling = True) 17-03-18 04:12:57.724 -07 000000610 INF: Z Motor: Moving to -0.168890 mm, started at -0.169693 mm, distance = 0.80 um 17-03-18 04:12:57.724 -07 000000610 INF: FPGA: Xmit ZDACW 36894\n [Z Motor] 17-03-18 04:12:57.724 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 04:12:57.734 -07 000000610 INF: FPGA: 'ZDACW 36894' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:12:57.734 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:57.734 -07 000000479 INF: FPGA: Recv ZDACR 36894 17-03-18 04:12:57.744 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.744 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:12:57.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.894 -07 000000474 INF: FPGA: Recv ZSGSRD 35575 17-03-18 04:12:57.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:12:57.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.904 -07 000000438 INF: FPGA: Recv ZSGSRD 35582 17-03-18 04:12:57.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.914 -07 000000474 INF: FPGA: Recv ZSGSRD 35580 17-03-18 04:12:57.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.924 -07 000000012 INF: FPGA: Recv ZSGSRD 35583 17-03-18 04:12:57.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.934 -07 000000618 INF: FPGA: Recv ZSGSRD 35577 17-03-18 04:12:57.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.944 -07 000000590 INF: FPGA: Recv ZSGSRD 35583 17-03-18 04:12:57.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.954 -07 000000438 INF: FPGA: Recv ZSGSRD 35580 17-03-18 04:12:57.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.964 -07 000000444 INF: FPGA: Recv ZSGSRD 35575 17-03-18 04:12:57.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.974 -07 000000585 INF: FPGA: Recv ZSGSRD 35578 17-03-18 04:12:57.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:12:57.984 -07 000000579 INF: FPGA: Recv ZSGSRD 35576 17-03-18 04:12:57.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:57.994 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:12:57.994 -07 000000585 INF: FPGA: Recv ZPIEZORD 31320 17-03-18 04:12:58.004 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:12:58.004 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.630 V. Piezo Error = -9.4 V. 17-03-18 04:12:58.004 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35579 (-168.0 uncal um), Error = 0.9 uncal um, Median = 35579 (-168.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35575 (-168.0 uncal um), Max = 35583 (-168.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 04:12:58.004 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35579, posNoise = 4, negNoise = 4 17-03-18 04:12:58.004 -07 000000610 INF: Z Motor: After move to -0.168890, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:12:58.004 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 04:12:58.004 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:12:58.004 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:12:58.004 -07 000000479 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:12:58.004 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:12:58.004 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:12:58.004 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:12:58.004 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:12:58.004 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:12:58.004 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:12:58.004 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:12:58.004 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:12:58.004 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:12:58.004 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:12:58.004 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:12:58.014 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:12:58.014 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:12:58.024 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 04:12:58.024 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:12:58.024 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 04:12:58.024 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:12:58.024 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 37070 150\n [Camera] 17-03-18 04:12:58.234 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:12:58.644 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:12:58.644 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:12:58.644 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:58.644 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:58.644 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) start. 17-03-18 04:12:58.654 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:12:58.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:12:58.654 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:58.764 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:58.764 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start. 17-03-18 04:12:58.844 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37070 802 17-03-18 04:12:58.984 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:12:59.044 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) end. Duration was 393 ms. 17-03-18 04:12:59.044 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-18 04:12:59.044 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:59.044 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:59.044 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-18 04:12:59.154 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 389 ms. 17-03-18 04:12:59.154 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-18 04:12:59.154 -07 000000608 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:59.154 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:59.164 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 514 ms. 17-03-18 04:12:59.194 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:12:59.194 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:12:59.194 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:12:59.194 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:12:59.194 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:12:59.194 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:12:59.194 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:12:59.194 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 04:12:59.204 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:12:59.204 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) start. 17-03-18 04:12:59.384 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:12:59.384 -07 000000501 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:12:59.384 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 37070 150' command took 2 ms to send, 1342 ms to get response, and 1353 ms overall 17-03-18 04:12:59.384 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 04:12:59.384 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 9 at Y-position 65.712890625, Z-Position -0.168890395802848. ------ 17-03-18 04:12:59.384 -07 000000608 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.17547 mm 17-03-18 04:12:59.384 -07 000000608 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:12:59.394 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:12:59.394 -07 000000438 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:12:59.394 -07 000000479 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True) 17-03-18 04:12:59.394 -07 000000479 INF: Y Motor: Moving to 66.5526 mm, started at 65.7129 mm, delta = 0.8397 mm 17-03-18 04:12:59.394 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 38332, sync = True, waitForSettling = False) 17-03-18 04:12:59.394 -07 000000590 INF: Z Motor: Moving to -0.175473 mm, started at -0.168890 mm, distance = -6.58 um 17-03-18 04:12:59.404 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 3 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 04:12:59.404 -07 000000590 INF: FPGA: Xmit ZDACW 38332\n [Z Motor] 17-03-18 04:12:59.404 -07 000000455 INF: FPGA: Recv ZDACW 17-03-18 04:12:59.414 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:59.414 -07 000000590 INF: FPGA: 'ZDACW 38332' command took 0 ms to send, 0 ms to get response, and 14 ms overall 17-03-18 04:12:59.414 -07 000000437 INF: FPGA: Recv YRDPOS 134580 17-03-18 04:12:59.424 -07 000000444 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 04:12:59.424 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall 17-03-18 04:12:59.424 -07 000000479 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:59.424 -07 000000479 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:12:59.424 -07 000000479 INF: Y Motor: Moving 1344 steps-20 17-03-18 04:12:59.434 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:12:59.434 -07 000000012 INF: FPGA: Recv ZDACR 38332 17-03-18 04:12:59.444 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 04:12:59.444 -07 000000479 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:12:59.444 -07 000000590 INF: Z Motor: MoveAbsStepped took 44 ms (did NOT wait for settling yet)) 17-03-18 04:12:59.474 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.005817, 17-03-18 04:12:59.574 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 04:12:59.574 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-18 04:12:59.574 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:59.574 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:59.574 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 04:12:59.574 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) end. Duration was 373 ms. 17-03-18 04:12:59.574 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms. 17-03-18 04:12:59.574 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:12:59.584 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:12:59.584 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 04:12:59.624 -07 000000625 INF: FPGA: Recv FOCMRRFOC 17-03-18 04:12:59.624 -07 000000444 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall 17-03-18 04:12:59.814 -07 000000561 INF: FPGA: Recv YMVTILE 17-03-18 04:12:59.814 -07 000000479 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 04:12:59.864 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:12:59.874 -07 000000561 INF: FPGA: Recv YRDPOS 136269 17-03-18 04:12:59.874 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 04:12:59.874 -07 000000479 INF: Y Motor: Encoder = 136269 = motor step 106460.2 = 66.5376 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:12:59.874 -07 000000479 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 04:12:59.874 -07 000000479 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.840 mm, average velocity = 2.115 mm/sec 17-03-18 04:13:00.824 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:00.824 -07 000000626 INF: FPGA: Recv YRDPOS 136269 17-03-18 04:13:00.834 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:00.834 -07 000000479 INF: Y Motor: Encoder = 136269 = motor step 106460.2 = 66.5376 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:00.864 -07 000000479 INF: Y Motor: After move to 66.552605, error = -0.015007, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:00.864 -07 000000479 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:00.864 -07 000000479 INF: Y Motor: Moved to 66.5376 after 1467 ms (table move) 17-03-18 04:13:00.864 -07 000000608 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175473 mm (DAC = 38332) 17-03-18 04:13:00.864 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:00.874 -07 000000474 INF: FPGA: Recv ZSGSRD 36605 17-03-18 04:13:00.874 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 5 ms overall 17-03-18 04:13:00.874 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:00.874 -07 000000590 INF: FPGA: Recv ZSGSRD 36604 17-03-18 04:13:00.884 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:00.884 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:00.884 -07 000000455 INF: FPGA: Recv ZSGSRD 36609 17-03-18 04:13:00.894 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:00.894 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:00.894 -07 000000437 INF: FPGA: Recv ZSGSRD 36604 17-03-18 04:13:00.904 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:00.904 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:00.904 -07 000000611 INF: FPGA: Recv ZSGSRD 36600 17-03-18 04:13:00.914 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:00.914 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:00.914 -07 000000474 INF: FPGA: Recv ZSGSRD 36600 17-03-18 04:13:00.924 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:00.924 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:00.924 -07 000000590 INF: FPGA: Recv ZSGSRD 36609 17-03-18 04:13:00.934 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:00.934 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:00.934 -07 000000501 INF: FPGA: Recv ZSGSRD 36597 17-03-18 04:13:00.944 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:00.944 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:00.944 -07 000000626 INF: FPGA: Recv ZSGSRD 36604 17-03-18 04:13:00.954 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:00.954 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:00.954 -07 000000579 INF: FPGA: Recv ZSGSRD 36609 17-03-18 04:13:00.964 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:00.964 -07 000000608 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:00.964 -07 000000512 INF: FPGA: Recv ZPIEZORD 32717 17-03-18 04:13:00.974 -07 000000608 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:00.974 -07 000000608 INF: Z Motor: Piezo is near 49.9 V (nominally 0 to 100 V), expect near 58.5 V, since DAC is at 5.849 V. Piezo Error = -8.6 V. 17-03-18 04:13:00.974 -07 000000608 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.5 um, Read 10 ADC samples: Avg = 36604 (-174.6 uncal um), Error = 0.9 uncal um, Median = 36604 (-174.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36597 (-174.5 uncal um), Max = 36609 (-174.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:13:00.974 -07 000000608 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36604, posNoise = 5, negNoise = 7 17-03-18 04:13:00.974 -07 000000608 INF: Z Motor: After move to -0.175473, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:00.974 -07 000000608 INF: Z Motor: Settle wait time = 1470 ms, measure time = 105 ms (allowed 150 ms), total time = 1575 ms 17-03-18 04:13:00.974 -07 000000608 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:01.024 -07 000000608 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1631 ms 17-03-18 04:13:01.024 -07 000000608 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:01.024 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:01.024 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:01.024 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:01.024 -07 000000625 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:01.024 -07 000000438 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 04:13:01.024 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:01.024 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 04:13:01.024 -07 000000438 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 04:13:01.034 -07 000000438 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 04:13:01.034 -07 000000438 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 04:13:01.044 -07 000000438 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms. 17-03-18 04:13:01.044 -07 000000438 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 13 ms. 17-03-18 04:13:01.044 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 04:13:01.084 -07 000000438 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 04:13:01.384 -07 000000579 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 04:13:01.384 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 04:13:01.384 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 04:13:01.394 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1077874736, 0x0, 559484976) start. 17-03-18 04:13:01.424 -07 000000618 INF: FPGA: Recv @CAMSNAP 380 17-03-18 04:13:01.424 -07 000000474 INF: FPGA: Recv CAMSNAP 17-03-18 04:13:01.424 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 2 ms to send, 377 ms to get response, and 384 ms overall 17-03-18 04:13:01.514 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1077874736, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 04:13:01.514 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:01.514 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 04:13:01.514 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 04:13:01.624 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:13:01.624 -07 000000447 INF: Autofocus start 17-03-18 04:13:01.624 -07 000000447 INF: MeasureProfile start 17-03-18 04:13:01.624 -07 000000590 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:13:01.634 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:01.634 -07 000000444 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 04:13:01.634 -07 000000447 INF: MeasureProfile done 17-03-18 04:13:01.634 -07 000000447 INF: X=0 Z correction [um]=-0.0713522 17-03-18 04:13:01.634 -07 000000447 INF: Autofocus finished 17-03-18 04:13:01.644 -07 000000479 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:01.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:01.834 -07 000000611 INF: FPGA: Recv FOCMRRIMG 17-03-18 04:13:01.834 -07 000000444 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 04:13:01.834 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53759765625, Z-position -0.175475213248153. ---------- 17-03-18 04:13:01.834 -07 000000610 INF: Cycle 122 Tile 9 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:01.844 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36829, sync = True, waitForSettling = True) 17-03-18 04:13:01.844 -07 000000610 INF: Z Motor: Moving to -0.168592 mm, started at -0.175475 mm, distance = 6.88 um 17-03-18 04:13:01.844 -07 000000610 INF: FPGA: Xmit ZDACW 36829\n [Z Motor] 17-03-18 04:13:01.844 -07 000000012 INF: FPGA: Recv ZDACW 17-03-18 04:13:01.854 -07 000000610 INF: FPGA: 'ZDACW 36829' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:01.854 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:01.854 -07 000000608 INF: FPGA: Recv ZDACR 36829 17-03-18 04:13:01.864 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:01.864 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:02.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:02.014 -07 000000012 INF: FPGA: Recv ZSGSRD 35535 17-03-18 04:13:02.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:02.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:02.024 -07 000000437 INF: FPGA: Recv ZSGSRD 35534 17-03-18 04:13:02.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:02.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:02.034 -07 000000447 INF: FPGA: Recv ZSGSRD 35531 17-03-18 04:13:02.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:02.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:02.044 -07 000000561 INF: FPGA: Recv ZSGSRD 35533 17-03-18 04:13:02.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:02.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:02.054 -07 000000608 INF: FPGA: Recv ZSGSRD 35532 17-03-18 04:13:02.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:02.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:02.064 -07 000000611 INF: FPGA: Recv ZSGSRD 35540 17-03-18 04:13:02.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:02.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:02.074 -07 000000438 INF: FPGA: Recv ZSGSRD 35535 17-03-18 04:13:02.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:02.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:02.084 -07 000000625 INF: FPGA: Recv ZSGSRD 35535 17-03-18 04:13:02.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:02.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:02.094 -07 000000012 INF: FPGA: Recv ZSGSRD 35536 17-03-18 04:13:02.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:02.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:02.104 -07 000000608 INF: FPGA: Recv ZSGSRD 35532 17-03-18 04:13:02.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:02.114 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:02.114 -07 000000611 INF: FPGA: Recv ZPIEZORD 31269 17-03-18 04:13:02.124 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:02.124 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.620 V. Piezo Error = -9.4 V. 17-03-18 04:13:02.124 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35534 (-167.7 uncal um), Error = 0.9 uncal um, Median = 35534 (-167.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35531 (-167.7 uncal um), Max = 35540 (-167.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 04:13:02.124 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35534, posNoise = 6, negNoise = 3 17-03-18 04:13:02.124 -07 000000610 INF: Z Motor: After move to -0.168592, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:02.124 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms) 17-03-18 04:13:02.124 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:02.124 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:02.124 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:02.124 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:02.124 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:02.124 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:02.124 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:02.124 -07 000000625 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:02.124 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:02.124 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:02.124 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:02.124 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:02.124 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:13:02.124 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:02.134 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:02.134 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:02.134 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 04:13:02.134 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 04:13:02.134 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 04:13:02.144 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms. 17-03-18 04:13:02.144 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 37006 150\n [Camera] 17-03-18 04:13:02.344 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:02.764 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:02.764 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:02.764 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:02.764 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:02.764 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2370046456, 0x0, 391868352) start. 17-03-18 04:13:02.764 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:02.764 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:02.764 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:02.764 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:02.764 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 04:13:02.954 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37006 802 17-03-18 04:13:03.104 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:03.134 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 374 ms. 17-03-18 04:13:03.134 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 04:13:03.134 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:03.144 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:03.144 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2370046456, 0x0, 391868352) end. Duration was 387 ms. 17-03-18 04:13:03.144 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 04:13:03.144 -07 000000608 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:03.144 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms. 17-03-18 04:13:03.154 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:03.154 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 04:13:03.304 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:03.304 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:03.304 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:03.304 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:03.304 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) start. 17-03-18 04:13:03.304 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:03.304 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:03.304 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:03.304 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:03.304 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) start. 17-03-18 04:13:03.494 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:13:03.494 -07 000000579 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:03.494 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 37006 150' command took 2 ms to send, 1345 ms to get response, and 1351 ms overall 17-03-18 04:13:03.494 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.169457 17-03-18 04:13:03.494 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.16946 mm 17-03-18 04:13:03.494 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:03.504 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True) 17-03-18 04:13:03.504 -07 000000444 INF: Y Motor: Moving to 67.3826 mm, started at 66.5376 mm, delta = 0.8450 mm 17-03-18 04:13:03.504 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:03.504 -07 000000474 INF: Z Motor: Entering MoveAbsStepped (DAC = 37018, sync = True, waitForSettling = False) 17-03-18 04:13:03.504 -07 000000474 INF: Z Motor: Moving to -0.169458 mm, started at -0.168601 mm, distance = -0.86 um 17-03-18 04:13:03.504 -07 000000579 INF: FPGA: Recv YRDPOS 136270 17-03-18 04:13:03.514 -07 000000474 INF: FPGA: Xmit ZDACW 37018\n [Z Motor] 17-03-18 04:13:03.514 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:03.514 -07 000000444 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:03.514 -07 000000479 INF: FPGA: Recv ZDACW 17-03-18 04:13:03.514 -07 000000444 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:03.514 -07 000000444 INF: Y Motor: Moving 1351 steps-31 17-03-18 04:13:03.524 -07 000000474 INF: FPGA: 'ZDACW 37018' command took 0 ms to send, 0 ms to get response, and 17 ms overall 17-03-18 04:13:03.524 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:03.534 -07 000000474 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:03.534 -07 000000501 INF: FPGA: Recv ZDACR 37018 17-03-18 04:13:03.544 -07 000000474 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:03.544 -07 000000474 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet)) 17-03-18 04:13:03.684 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) end. Duration was 383 ms. 17-03-18 04:13:03.684 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 04:13:03.684 -07 000000590 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:03.684 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) end. Duration was 381 ms. 17-03-18 04:13:03.684 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms. 17-03-18 04:13:03.684 -07 000000608 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:03.694 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:03.694 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-18 04:13:03.694 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 04:13:03.704 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-18 04:13:03.894 -07 000000012 INF: FPGA: Recv YMVTILE 17-03-18 04:13:03.894 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall 17-03-18 04:13:03.944 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:03.954 -07 000000479 INF: FPGA: Recv YRDPOS 137975 17-03-18 04:13:03.954 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:03.954 -07 000000444 INF: Y Motor: Encoder = 137975 = motor step 107793.0 = 67.3706 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:03.954 -07 000000444 INF: Y Motor: Position error before settling (table move) = -25 encoder counts (-0.012 mm) 17-03-18 04:13:03.954 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.845 mm, average velocity = 2.201 mm/sec 17-03-18 04:13:04.834 -07 000000479 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.023489, 17-03-18 04:13:04.904 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:04.904 -07 000000487 INF: FPGA: Recv YRDPOS 137975 17-03-18 04:13:04.914 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:04.914 -07 000000444 INF: Y Motor: Encoder = 137975 = motor step 107793.0 = 67.3706 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:04.944 -07 000000444 INF: Y Motor: After move to 67.382607, error = -0.012001, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:04.944 -07 000000444 INF: Y Motor: Position error after settling (table move) = -25 encoder counts (-0.012 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:04.944 -07 000000444 INF: Y Motor: Moved to 67.3706 after 1439 ms (table move) 17-03-18 04:13:04.944 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169458 mm (DAC = 37018) 17-03-18 04:13:04.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:04.944 -07 000000447 INF: FPGA: Recv ZSGSRD 35672 17-03-18 04:13:04.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:13:04.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:04.954 -07 000000444 INF: FPGA: Recv ZSGSRD 35677 17-03-18 04:13:04.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:04.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:04.964 -07 000000579 INF: FPGA: Recv ZSGSRD 35663 17-03-18 04:13:04.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:04.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:04.974 -07 000000501 INF: FPGA: Recv ZSGSRD 35667 17-03-18 04:13:04.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:04.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:04.984 -07 000000585 INF: FPGA: Recv ZSGSRD 35673 17-03-18 04:13:04.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:04.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:04.994 -07 000000625 INF: FPGA: Recv ZSGSRD 35658 17-03-18 04:13:05.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.004 -07 000000438 INF: FPGA: Recv ZSGSRD 35659 17-03-18 04:13:05.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.014 -07 000000474 INF: FPGA: Recv ZSGSRD 35668 17-03-18 04:13:05.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.024 -07 000000444 INF: FPGA: Recv ZSGSRD 35675 17-03-18 04:13:05.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.034 -07 000000626 INF: FPGA: Recv ZSGSRD 35672 17-03-18 04:13:05.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.044 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:05.044 -07 000000608 INF: FPGA: Recv ZPIEZORD 31467 17-03-18 04:13:05.054 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.054 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.649 V. Piezo Error = -9.3 V. 17-03-18 04:13:05.054 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.5 um, Read 10 ADC samples: Avg = 35668 (-168.6 uncal um), Error = 0.9 uncal um, Median = 35670 (-168.6 uncal um), StdDev = 7 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 35658 (-168.5 uncal um), Max = 35677 (-168.6 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-18 04:13:05.054 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35668, posNoise = 9, negNoise = 10 17-03-18 04:13:05.054 -07 000000610 INF: Z Motor: After move to -0.169458, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:05.054 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 106 ms (allowed 150 ms), total time = 1548 ms 17-03-18 04:13:05.054 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:05.104 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms 17-03-18 04:13:05.104 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:05.104 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37060546875, Z-position -0.169462150683465. ---------- 17-03-18 04:13:05.104 -07 000000610 INF: Cycle 122 Tile 10 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:05.104 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36841, sync = True, waitForSettling = True) 17-03-18 04:13:05.104 -07 000000610 INF: Z Motor: Moving to -0.168647 mm, started at -0.169462 mm, distance = 0.81 um 17-03-18 04:13:05.104 -07 000000610 INF: FPGA: Xmit ZDACW 36841\n [Z Motor] 17-03-18 04:13:05.104 -07 000000438 INF: FPGA: Recv ZDACW 17-03-18 04:13:05.114 -07 000000610 INF: FPGA: 'ZDACW 36841' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:05.114 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:05.114 -07 000000611 INF: FPGA: Recv ZDACR 36841 17-03-18 04:13:05.124 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.124 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:05.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.274 -07 000000479 INF: FPGA: Recv ZSGSRD 35543 17-03-18 04:13:05.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:05.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.284 -07 000000437 INF: FPGA: Recv ZSGSRD 35546 17-03-18 04:13:05.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.294 -07 000000455 INF: FPGA: Recv ZSGSRD 35535 17-03-18 04:13:05.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.304 -07 000000444 INF: FPGA: Recv ZSGSRD 35538 17-03-18 04:13:05.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.314 -07 000000512 INF: FPGA: Recv ZSGSRD 35532 17-03-18 04:13:05.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.324 -07 000000479 INF: FPGA: Recv ZSGSRD 35541 17-03-18 04:13:05.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.334 -07 000000438 INF: FPGA: Recv ZSGSRD 35544 17-03-18 04:13:05.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.344 -07 000000455 INF: FPGA: Recv ZSGSRD 35547 17-03-18 04:13:05.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.354 -07 000000561 INF: FPGA: Recv ZSGSRD 35548 17-03-18 04:13:05.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:05.364 -07 000000012 INF: FPGA: Recv ZSGSRD 35546 17-03-18 04:13:05.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.374 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:05.374 -07 000000479 INF: FPGA: Recv ZPIEZORD 31307 17-03-18 04:13:05.384 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:05.384 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.622 V. Piezo Error = -9.3 V. 17-03-18 04:13:05.384 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35542 (-167.8 uncal um), Error = 0.9 uncal um, Median = 35544 (-167.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35532 (-167.7 uncal um), Max = 35548 (-167.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-18 04:13:05.384 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35542, posNoise = 6, negNoise = 10 17-03-18 04:13:05.384 -07 000000610 INF: Z Motor: After move to -0.168647, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:05.384 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 04:13:05.384 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:05.384 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:05.384 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:05.384 -07 000000585 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:05.384 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:05.384 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:05.384 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:05.384 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:05.384 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms. 17-03-18 04:13:05.384 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:05.384 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:05.384 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:05.394 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 04:13:05.394 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:05.394 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:13:05.394 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:05.394 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 04:13:05.394 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 04:13:05.404 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms. 17-03-18 04:13:05.404 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 04:13:05.404 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 37018 150\n [Camera] 17-03-18 04:13:05.604 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:06.024 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:06.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:06.024 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:06.024 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:06.024 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start. 17-03-18 04:13:06.024 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:06.024 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:06.024 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:06.024 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:06.024 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start. 17-03-18 04:13:06.214 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37018 802 17-03-18 04:13:06.364 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:06.404 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 04:13:06.404 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 04:13:06.404 -07 000000611 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:06.404 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 04:13:06.404 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 04:13:06.404 -07 000000608 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:06.404 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:06.404 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:06.404 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 04:13:06.414 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 04:13:06.564 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:06.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:06.564 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:06.564 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:06.564 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:06.564 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:06.574 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:06.574 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-18 04:13:06.574 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:06.574 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:13:06.644 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:06.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:06.754 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:13:06.754 -07 000000590 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:06.754 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 37018 150' command took 2 ms to send, 1346 ms to get response, and 1351 ms overall 17-03-18 04:13:06.754 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.168899 17-03-18 04:13:06.754 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16890 mm 17-03-18 04:13:06.754 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:06.764 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True) 17-03-18 04:13:06.764 -07 000000501 INF: Y Motor: Moving to 68.2126 mm, started at 67.3706 mm, delta = 0.8420 mm 17-03-18 04:13:06.764 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:06.764 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 36896, sync = True, waitForSettling = False) 17-03-18 04:13:06.764 -07 000000437 INF: Z Motor: Moving to -0.168899 mm, started at -0.168653 mm, distance = -0.25 um 17-03-18 04:13:06.764 -07 000000447 INF: FPGA: Recv YRDPOS 137975 17-03-18 04:13:06.774 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:06.774 -07 000000501 INF: Y Motor: Encoder = 137975 = motor step 107793.0 = 67.3706 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:06.774 -07 000000501 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:06.774 -07 000000501 INF: Y Motor: Moving 1347 steps-25 17-03-18 04:13:06.774 -07 000000437 INF: FPGA: Xmit ZDACW 36896\n [Z Motor] 17-03-18 04:13:06.774 -07 000000585 INF: FPGA: Recv ZDACW 17-03-18 04:13:06.784 -07 000000437 INF: FPGA: 'ZDACW 36896' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:06.784 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:06.784 -07 000000438 INF: FPGA: Recv ZDACR 36896 17-03-18 04:13:06.794 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:06.794 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:06.794 -07 000000437 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet)) 17-03-18 04:13:06.954 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 377 ms. 17-03-18 04:13:06.954 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms. 17-03-18 04:13:06.954 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:06.954 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 04:13:06.954 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 04:13:06.954 -07 000000611 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:06.954 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:13:06.954 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 04:13:06.954 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:13:06.964 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-18 04:13:07.164 -07 000000625 INF: FPGA: Recv YMVTILE 17-03-18 04:13:07.164 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 04:13:07.214 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:07.214 -07 000000479 INF: FPGA: Recv YRDPOS 139681 17-03-18 04:13:07.224 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:07.224 -07 000000501 INF: Y Motor: Encoder = 139681 = motor step 109125.8 = 68.2036 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:07.224 -07 000000501 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm) 17-03-18 04:13:07.224 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.842 mm, average velocity = 2.121 mm/sec 17-03-18 04:13:08.174 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:08.174 -07 000000625 INF: FPGA: Recv YRDPOS 139681 17-03-18 04:13:08.184 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:08.184 -07 000000501 INF: Y Motor: Encoder = 139681 = motor step 109125.8 = 68.2036 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:08.214 -07 000000501 INF: Y Motor: After move to 68.212608, error = -0.008995, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:08.214 -07 000000501 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:08.214 -07 000000501 INF: Y Motor: Moved to 68.2036 after 1450 ms (table move) 17-03-18 04:13:08.214 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168899 mm (DAC = 36896) 17-03-18 04:13:08.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.214 -07 000000487 INF: FPGA: Recv ZSGSRD 35582 17-03-18 04:13:08.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:08.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.224 -07 000000625 INF: FPGA: Recv ZSGSRD 35585 17-03-18 04:13:08.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.234 -07 000000579 INF: FPGA: Recv ZSGSRD 35580 17-03-18 04:13:08.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.244 -07 000000480 INF: FPGA: Recv ZSGSRD 35581 17-03-18 04:13:08.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.254 -07 000000455 INF: FPGA: Recv ZSGSRD 35583 17-03-18 04:13:08.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.264 -07 000000608 INF: FPGA: Recv ZSGSRD 35574 17-03-18 04:13:08.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.274 -07 000000447 INF: FPGA: Recv ZSGSRD 35579 17-03-18 04:13:08.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.284 -07 000000474 INF: FPGA: Recv ZSGSRD 35583 17-03-18 04:13:08.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.294 -07 000000626 INF: FPGA: Recv ZSGSRD 35584 17-03-18 04:13:08.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.304 -07 000000455 INF: FPGA: Recv ZSGSRD 35586 17-03-18 04:13:08.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.314 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:08.314 -07 000000608 INF: FPGA: Recv ZPIEZORD 31350 17-03-18 04:13:08.324 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.324 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.630 V. Piezo Error = -9.3 V. 17-03-18 04:13:08.324 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35582 (-168.0 uncal um), Error = 0.9 uncal um, Median = 35582 (-168.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35574 (-168.0 uncal um), Max = 35586 (-168.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 04:13:08.324 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35582, posNoise = 4, negNoise = 8 17-03-18 04:13:08.324 -07 000000610 INF: Z Motor: After move to -0.168899, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:08.324 -07 000000610 INF: Z Motor: Settle wait time = 1452 ms, measure time = 108 ms (allowed 150 ms), total time = 1560 ms 17-03-18 04:13:08.324 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:08.374 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms 17-03-18 04:13:08.374 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:08.374 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20361328125, Z-position -0.168909668439273. ---------- 17-03-18 04:13:08.374 -07 000000610 INF: Cycle 122 Tile 11 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:08.374 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36719, sync = True, waitForSettling = True) 17-03-18 04:13:08.374 -07 000000610 INF: Z Motor: Moving to -0.168089 mm, started at -0.168910 mm, distance = 0.82 um 17-03-18 04:13:08.374 -07 000000610 INF: FPGA: Xmit ZDACW 36719\n [Z Motor] 17-03-18 04:13:08.374 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 04:13:08.384 -07 000000610 INF: FPGA: 'ZDACW 36719' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:08.384 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:08.384 -07 000000474 INF: FPGA: Recv ZDACR 36719 17-03-18 04:13:08.394 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.394 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:08.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.544 -07 000000512 INF: FPGA: Recv ZSGSRD 35463 17-03-18 04:13:08.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:08.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.554 -07 000000437 INF: FPGA: Recv ZSGSRD 35464 17-03-18 04:13:08.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.564 -07 000000480 INF: FPGA: Recv ZSGSRD 35452 17-03-18 04:13:08.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.574 -07 000000611 INF: FPGA: Recv ZSGSRD 35454 17-03-18 04:13:08.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.584 -07 000000512 INF: FPGA: Recv ZSGSRD 35454 17-03-18 04:13:08.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.594 -07 000000611 INF: FPGA: Recv ZSGSRD 35462 17-03-18 04:13:08.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.604 -07 000000437 INF: FPGA: Recv ZSGSRD 35455 17-03-18 04:13:08.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.614 -07 000000561 INF: FPGA: Recv ZSGSRD 35451 17-03-18 04:13:08.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.624 -07 000000444 INF: FPGA: Recv ZSGSRD 35460 17-03-18 04:13:08.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:08.634 -07 000000618 INF: FPGA: Recv ZSGSRD 35454 17-03-18 04:13:08.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:08.644 -07 000000480 INF: FPGA: Recv ZPIEZORD 31175 17-03-18 04:13:08.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:08.654 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.603 V. Piezo Error = -9.4 V. 17-03-18 04:13:08.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.1 um, Read 10 ADC samples: Avg = 35457 (-167.2 uncal um), Error = 0.9 uncal um, Median = 35454 (-167.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35451 (-167.2 uncal um), Max = 35464 (-167.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:13:08.654 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35457, posNoise = 7, negNoise = 6 17-03-18 04:13:08.654 -07 000000610 INF: Z Motor: After move to -0.168089, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:08.654 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 04:13:08.654 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:08.654 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:08.654 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:08.654 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:08.654 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:08.654 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:08.654 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:08.654 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:08.654 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:08.654 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:08.654 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:08.654 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:08.664 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:08.664 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:08.664 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:13:08.664 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:08.674 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 04:13:08.674 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:13:08.674 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 04:13:08.674 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 04:13:08.684 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 36896 150\n [Camera] 17-03-18 04:13:08.884 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:09.294 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:09.294 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:09.294 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:09.304 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:09.304 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:09.304 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:09.304 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:09.304 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) start. 17-03-18 04:13:09.304 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:09.304 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:13:09.494 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36896 802 17-03-18 04:13:09.644 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 954 17-03-18 04:13:09.674 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 04:13:09.674 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 04:13:09.674 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:09.674 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 04:13:09.674 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 04:13:09.674 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:09.684 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:09.684 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 04:13:09.684 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:09.694 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 04:13:09.844 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154 17-03-18 04:13:09.844 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154 17-03-18 04:13:09.844 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:09.844 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:09.844 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) start. 17-03-18 04:13:09.844 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154 17-03-18 04:13:09.844 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154 17-03-18 04:13:09.844 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:09.964 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:09.964 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start. 17-03-18 04:13:10.034 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:13:10.034 -07 000000012 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:10.034 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 36896 150' command took 2 ms to send, 1342 ms to get response, and 1351 ms overall 17-03-18 04:13:10.034 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.168687 17-03-18 04:13:10.034 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.16869 mm 17-03-18 04:13:10.034 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:10.034 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True) 17-03-18 04:13:10.034 -07 000000480 INF: Y Motor: Moving to 69.0426 mm, started at 68.2036 mm, delta = 0.8390 mm 17-03-18 04:13:10.034 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:10.034 -07 000000487 INF: Z Motor: Entering MoveAbsStepped (DAC = 36850, sync = True, waitForSettling = False) 17-03-18 04:13:10.034 -07 000000487 INF: Z Motor: Moving to -0.168688 mm, started at -0.168107 mm, distance = -0.58 um 17-03-18 04:13:10.044 -07 000000487 INF: FPGA: Xmit ZDACW 36850\n [Z Motor] 17-03-18 04:13:10.044 -07 000000437 INF: FPGA: Recv YRDPOS 139682 17-03-18 04:13:10.044 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:10.044 -07 000000480 INF: Y Motor: Encoder = 139682 = motor step 109126.6 = 68.2041 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:10.044 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 04:13:10.044 -07 000000480 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:10.044 -07 000000480 INF: Y Motor: Moving 1342 steps-18 17-03-18 04:13:10.054 -07 000000487 INF: FPGA: 'ZDACW 36850' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-18 04:13:10.054 -07 000000487 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:10.054 -07 000000437 INF: FPGA: Recv ZDACR 36850 17-03-18 04:13:10.064 -07 000000487 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:10.064 -07 000000487 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet)) 17-03-18 04:13:10.064 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:10.234 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) end. Duration was 387 ms. 17-03-18 04:13:10.234 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 04:13:10.234 -07 000000608 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:10.234 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:10.234 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 04:13:10.284 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.004458, 17-03-18 04:13:10.344 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 382 ms. 17-03-18 04:13:10.344 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms. 17-03-18 04:13:10.344 -07 000000611 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:10.354 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:10.354 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 511 ms. 17-03-18 04:13:10.444 -07 000000626 INF: FPGA: Recv YMVTILE 17-03-18 04:13:10.444 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 396 ms overall 17-03-18 04:13:10.494 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:10.494 -07 000000579 INF: FPGA: Recv YRDPOS 141365 17-03-18 04:13:10.504 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:10.504 -07 000000480 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:10.504 -07 000000480 INF: Y Motor: Position error before settling (table move) = -34 encoder counts (-0.017 mm) 17-03-18 04:13:10.504 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.113 mm/sec 17-03-18 04:13:11.454 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:11.454 -07 000000561 INF: FPGA: Recv YRDPOS 141365 17-03-18 04:13:11.464 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.464 -07 000000480 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:11.494 -07 000000480 INF: Y Motor: After move to 69.042610, error = -0.016731, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:11.494 -07 000000480 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:11.494 -07 000000480 INF: Y Motor: Moved to 69.0259 after 1453 ms (table move) 17-03-18 04:13:11.494 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168688 mm (DAC = 36850) 17-03-18 04:13:11.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.494 -07 000000487 INF: FPGA: Recv ZSGSRD 35544 17-03-18 04:13:11.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:13:11.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.504 -07 000000579 INF: FPGA: Recv ZSGSRD 35549 17-03-18 04:13:11.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.514 -07 000000611 INF: FPGA: Recv ZSGSRD 35548 17-03-18 04:13:11.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.524 -07 000000608 INF: FPGA: Recv ZSGSRD 35543 17-03-18 04:13:11.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.534 -07 000000438 INF: FPGA: Recv ZSGSRD 35548 17-03-18 04:13:11.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.544 -07 000000579 INF: FPGA: Recv ZSGSRD 35552 17-03-18 04:13:11.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.554 -07 000000487 INF: FPGA: Recv ZSGSRD 35546 17-03-18 04:13:11.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.564 -07 000000479 INF: FPGA: Recv ZSGSRD 35557 17-03-18 04:13:11.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.574 -07 000000512 INF: FPGA: Recv ZSGSRD 35551 17-03-18 04:13:11.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.584 -07 000000579 INF: FPGA: Recv ZSGSRD 35545 17-03-18 04:13:11.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.594 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:11.594 -07 000000487 INF: FPGA: Recv ZPIEZORD 31340 17-03-18 04:13:11.604 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.604 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.623 V. Piezo Error = -9.3 V. 17-03-18 04:13:11.604 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.7 um, Read 10 ADC samples: Avg = 35548 (-167.8 uncal um), Error = 0.9 uncal um, Median = 35548 (-167.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35543 (-167.8 uncal um), Max = 35557 (-167.9 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:13:11.604 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35548, posNoise = 9, negNoise = 5 17-03-18 04:13:11.604 -07 000000610 INF: Z Motor: After move to -0.168688, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:11.604 -07 000000610 INF: Z Motor: Settle wait time = 1455 ms, measure time = 108 ms (allowed 150 ms), total time = 1563 ms 17-03-18 04:13:11.604 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:11.644 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:11.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:11.654 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1615 ms 17-03-18 04:13:11.654 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:11.654 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02587890625, Z-position -0.168691245226453. ---------- 17-03-18 04:13:11.654 -07 000000610 INF: Cycle 122 Tile 12 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:11.654 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36673, sync = True, waitForSettling = True) 17-03-18 04:13:11.654 -07 000000610 INF: Z Motor: Moving to -0.167878 mm, started at -0.168691 mm, distance = 0.81 um 17-03-18 04:13:11.654 -07 000000610 INF: FPGA: Xmit ZDACW 36673\n [Z Motor] 17-03-18 04:13:11.654 -07 000000625 INF: FPGA: Recv ZDACW 17-03-18 04:13:11.664 -07 000000610 INF: FPGA: 'ZDACW 36673' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:13:11.664 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:11.664 -07 000000618 INF: FPGA: Recv ZDACR 36673 17-03-18 04:13:11.674 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.674 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:11.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.824 -07 000000611 INF: FPGA: Recv ZSGSRD 35423 17-03-18 04:13:11.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:11.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.834 -07 000000480 INF: FPGA: Recv ZSGSRD 35426 17-03-18 04:13:11.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.844 -07 000000438 INF: FPGA: Recv ZSGSRD 35417 17-03-18 04:13:11.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.854 -07 000000626 INF: FPGA: Recv ZSGSRD 35422 17-03-18 04:13:11.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.864 -07 000000618 INF: FPGA: Recv ZSGSRD 35417 17-03-18 04:13:11.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.874 -07 000000437 INF: FPGA: Recv ZSGSRD 35426 17-03-18 04:13:11.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.884 -07 000000455 INF: FPGA: Recv ZSGSRD 35431 17-03-18 04:13:11.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.894 -07 000000480 INF: FPGA: Recv ZSGSRD 35421 17-03-18 04:13:11.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.904 -07 000000474 INF: FPGA: Recv ZSGSRD 35426 17-03-18 04:13:11.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:11.914 -07 000000512 INF: FPGA: Recv ZSGSRD 35422 17-03-18 04:13:11.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.924 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:11.924 -07 000000579 INF: FPGA: Recv ZPIEZORD 31159 17-03-18 04:13:11.934 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:11.934 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.596 V. Piezo Error = -9.4 V. 17-03-18 04:13:11.934 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35423 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35422 (-167.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35417 (-167.0 uncal um), Max = 35431 (-167.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:13:11.934 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35423, posNoise = 8, negNoise = 6 17-03-18 04:13:11.934 -07 000000610 INF: Z Motor: After move to -0.167878, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:11.934 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:13:11.934 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:11.934 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:11.934 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:11.934 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:11.934 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:11.934 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:11.934 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:11.934 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:11.934 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:11.934 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:11.934 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:11.934 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:11.944 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:11.944 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:11.944 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:13:11.944 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:11.954 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 04:13:11.954 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:13:11.954 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 04:13:11.954 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:13:11.964 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 36850 150\n [Camera] 17-03-18 04:13:12.164 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:12.574 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:12.584 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:12.584 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:12.584 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:12.584 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:12.584 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:12.594 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:12.594 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:13:12.594 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:12.594 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) start. 17-03-18 04:13:12.774 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36850 802 17-03-18 04:13:12.924 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:12.964 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 371 ms. 17-03-18 04:13:12.964 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 04:13:12.964 -07 000000438 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:12.964 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:12.974 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) end. Duration was 373 ms. 17-03-18 04:13:12.974 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 04:13:12.974 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:12.974 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:12.974 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 04:13:12.974 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 04:13:13.124 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:13.124 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:13.124 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:13.124 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:13.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:13.124 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:13.124 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:13.124 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) start. 17-03-18 04:13:13.124 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:13.124 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:13:13.314 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:13:13.314 -07 000000611 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:13.314 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 36850 150' command took 2 ms to send, 1342 ms to get response, and 1351 ms overall 17-03-18 04:13:13.314 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 04:13:13.314 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 13 at Y-position 69.02587890625, Z-Position -0.167888218708733. ------ 17-03-18 04:13:13.314 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:13:13.314 -07 000000474 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.17431 mm 17-03-18 04:13:13.314 -07 000000474 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:13.324 -07 000000579 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:13:13.324 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-18 04:13:13.324 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 38077, sync = True, waitForSettling = False) 17-03-18 04:13:13.324 -07 000000438 INF: Z Motor: Moving to -0.174305 mm, started at -0.167888 mm, distance = -6.42 um 17-03-18 04:13:13.324 -07 000000438 INF: FPGA: Xmit ZDACW 38077\n [Z Motor] 17-03-18 04:13:13.324 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True) 17-03-18 04:13:13.324 -07 000000455 INF: Y Motor: Moving to 69.8726 mm, started at 69.0259 mm, delta = 0.8467 mm 17-03-18 04:13:13.324 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 04:13:13.334 -07 000000438 INF: FPGA: 'ZDACW 38077' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:13.334 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:13.334 -07 000000444 INF: FPGA: Recv ZDACR 38077 17-03-18 04:13:13.344 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 04:13:13.344 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:13.344 -07 000000438 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet)) 17-03-18 04:13:13.354 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:13.354 -07 000000444 INF: FPGA: Recv YRDPOS 141365 17-03-18 04:13:13.364 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 35 ms overall 17-03-18 04:13:13.364 -07 000000455 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:13.364 -07 000000455 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:13.364 -07 000000455 INF: Y Motor: Moving 1355 steps-34 17-03-18 04:13:13.364 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:13.504 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 375 ms. 17-03-18 04:13:13.504 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-18 04:13:13.504 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:13.504 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) end. Duration was 378 ms. 17-03-18 04:13:13.504 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-18 04:13:13.504 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:13.504 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:13.504 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 04:13:13.504 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:13.514 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 04:13:13.544 -07 000000512 INF: FPGA: Recv FOCMRRFOC 17-03-18 04:13:13.544 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 219 ms overall 17-03-18 04:13:13.744 -07 000000608 INF: FPGA: Recv YMVTILE 17-03-18 04:13:13.744 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 380 ms overall 17-03-18 04:13:13.784 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:13.794 -07 000000438 INF: FPGA: Recv YRDPOS 143077 17-03-18 04:13:13.804 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:13.804 -07 000000455 INF: Y Motor: Encoder = 143077 = motor step 111778.9 = 69.8618 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:13.804 -07 000000455 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm) 17-03-18 04:13:13.804 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 380 ms, distance = 0.847 mm, average velocity = 2.228 mm/sec 17-03-18 04:13:14.754 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:14.754 -07 000000590 INF: FPGA: Recv YRDPOS 143078 17-03-18 04:13:14.764 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:14.764 -07 000000455 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:14.784 -07 000000455 INF: Y Motor: After move to 69.872612, error = -0.010307, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:14.794 -07 000000455 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 04:13:14.794 -07 000000455 INF: Y Motor: Moved to 69.8623 after 1465 ms (table move) 17-03-18 04:13:14.794 -07 000000474 INF: Z Motor: EndOfMoveAbsStepped: target = -0.174305 mm (DAC = 38077) 17-03-18 04:13:14.794 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:14.794 -07 000000585 INF: FPGA: Recv ZSGSRD 36435 17-03-18 04:13:14.804 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:13:14.804 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:14.804 -07 000000618 INF: FPGA: Recv ZSGSRD 36432 17-03-18 04:13:14.814 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:14.814 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:14.814 -07 000000437 INF: FPGA: Recv ZSGSRD 36416 17-03-18 04:13:14.824 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:14.824 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:14.824 -07 000000480 INF: FPGA: Recv ZSGSRD 36416 17-03-18 04:13:14.834 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:14.834 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:14.834 -07 000000561 INF: FPGA: Recv ZSGSRD 36421 17-03-18 04:13:14.844 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:14.844 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:14.844 -07 000000611 INF: FPGA: Recv ZSGSRD 36423 17-03-18 04:13:14.854 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:14.854 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:14.854 -07 000000618 INF: FPGA: Recv ZSGSRD 36422 17-03-18 04:13:14.864 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:14.864 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:14.864 -07 000000447 INF: FPGA: Recv ZSGSRD 36427 17-03-18 04:13:14.874 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:14.874 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:14.874 -07 000000444 INF: FPGA: Recv ZSGSRD 36421 17-03-18 04:13:14.884 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:14.884 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:14.884 -07 000000561 INF: FPGA: Recv ZSGSRD 36421 17-03-18 04:13:14.894 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:14.894 -07 000000474 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:14.894 -07 000000579 INF: FPGA: Recv ZPIEZORD 32459 17-03-18 04:13:14.904 -07 000000474 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:14.904 -07 000000474 INF: Z Motor: Piezo is near 49.3 V (nominally 0 to 100 V), expect near 58.1 V, since DAC is at 5.810 V. Piezo Error = -8.8 V. 17-03-18 04:13:14.904 -07 000000474 INF: Z Motor: ReadAdcAverage: Commanded Z = -174.3 um, Read 10 ADC samples: Avg = 36423 (-173.4 uncal um), Error = 0.9 uncal um, Median = 36422 (-173.4 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 36416 (-173.4 uncal um), Max = 36435 (-173.5 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:13:14.904 -07 000000474 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36423, posNoise = 12, negNoise = 7 17-03-18 04:13:14.904 -07 000000474 INF: Z Motor: After move to -0.174305, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:14.904 -07 000000474 INF: Z Motor: Settle wait time = 1471 ms, measure time = 106 ms (allowed 150 ms), total time = 1577 ms 17-03-18 04:13:14.904 -07 000000474 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:14.954 -07 000000474 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1630 ms 17-03-18 04:13:14.954 -07 000000474 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:14.954 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:14.954 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:14.954 -07 000000437 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:14.954 -07 000000625 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 04:13:14.954 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:14.954 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:14.954 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 04:13:14.954 -07 000000625 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 04:13:14.964 -07 000000625 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:14.964 -07 000000625 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 04:13:14.964 -07 000000625 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms. 17-03-18 04:13:14.964 -07 000000625 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms. 17-03-18 04:13:14.974 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 04:13:15.014 -07 000000618 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 04:13:15.314 -07 000000608 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 04:13:15.314 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 04:13:15.314 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 04:13:15.314 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2281705520, 0x0, 559484976) start. 17-03-18 04:13:15.354 -07 000000487 INF: FPGA: Recv @CAMSNAP 380 17-03-18 04:13:15.354 -07 000000479 INF: FPGA: Recv CAMSNAP 17-03-18 04:13:15.354 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 385 ms overall 17-03-18 04:13:15.444 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2281705520, 0x0, 559484976) end. Duration was 125 ms. 17-03-18 04:13:15.444 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:15.444 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 04:13:15.444 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms. 17-03-18 04:13:15.454 -07 000000012 INF: Autofocus start 17-03-18 04:13:15.454 -07 000000012 INF: MeasureProfile start 17-03-18 04:13:15.454 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:13:15.454 -07 000000585 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:13:15.464 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:15.464 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 04:13:15.464 -07 000000012 INF: MeasureProfile done 17-03-18 04:13:15.464 -07 000000012 INF: X=16 Z correction [um]=0.01042744 17-03-18 04:13:15.464 -07 000000012 INF: Autofocus finished 17-03-18 04:13:15.644 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.98264, 17-03-18 04:13:15.664 -07 000000611 INF: FPGA: Recv FOCMRRIMG 17-03-18 04:13:15.664 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 203 ms overall 17-03-18 04:13:15.664 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.8623046875, Z-position -0.174312430850494. ---------- 17-03-18 04:13:15.664 -07 000000610 INF: Cycle 122 Tile 13 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:15.674 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36592, sync = True, waitForSettling = True) 17-03-18 04:13:15.674 -07 000000610 INF: Z Motor: Moving to -0.167507 mm, started at -0.174312 mm, distance = 6.80 um 17-03-18 04:13:15.684 -07 000000610 INF: FPGA: Xmit ZDACW 36592\n [Z Motor] 17-03-18 04:13:15.684 -07 000000585 INF: FPGA: Recv ZDACW 17-03-18 04:13:15.694 -07 000000610 INF: FPGA: 'ZDACW 36592' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:15.694 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:15.694 -07 000000012 INF: FPGA: Recv ZDACR 36592 17-03-18 04:13:15.704 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:15.704 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:15.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:15.854 -07 000000444 INF: FPGA: Recv ZSGSRD 35362 17-03-18 04:13:15.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:15.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:15.864 -07 000000437 INF: FPGA: Recv ZSGSRD 35364 17-03-18 04:13:15.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:15.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:15.874 -07 000000561 INF: FPGA: Recv ZSGSRD 35361 17-03-18 04:13:15.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:15.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:15.884 -07 000000501 INF: FPGA: Recv ZSGSRD 35361 17-03-18 04:13:15.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:15.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:15.894 -07 000000012 INF: FPGA: Recv ZSGSRD 35367 17-03-18 04:13:15.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:15.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:15.914 -07 000000444 INF: FPGA: Recv ZSGSRD 35366 17-03-18 04:13:15.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:15.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:15.924 -07 000000512 INF: FPGA: Recv ZSGSRD 35361 17-03-18 04:13:15.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:15.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:15.934 -07 000000487 INF: FPGA: Recv ZSGSRD 35364 17-03-18 04:13:15.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:15.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:15.944 -07 000000438 INF: FPGA: Recv ZSGSRD 35366 17-03-18 04:13:15.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:15.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:15.954 -07 000000626 INF: FPGA: Recv ZSGSRD 35365 17-03-18 04:13:15.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:15.964 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:15.964 -07 000000438 INF: FPGA: Recv ZPIEZORD 31087 17-03-18 04:13:15.974 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:15.974 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.584 V. Piezo Error = -9.4 V. 17-03-18 04:13:15.974 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.5 um, Read 10 ADC samples: Avg = 35364 (-166.6 uncal um), Error = 0.9 uncal um, Median = 35364 (-166.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35361 (-166.6 uncal um), Max = 35367 (-166.7 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 04:13:15.974 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35364, posNoise = 3, negNoise = 3 17-03-18 04:13:15.974 -07 000000610 INF: Z Motor: After move to -0.167507, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:15.974 -07 000000610 INF: Z Motor: MoveAbsStepped took 300 ms) 17-03-18 04:13:15.974 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:15.974 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:15.974 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:15.974 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:15.974 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:15.974 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:15.974 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:15.974 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:15.974 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:15.974 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:15.974 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:15.974 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:15.984 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:15.984 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:15.984 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:13:15.984 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:15.994 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms. 17-03-18 04:13:15.994 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-18 04:13:15.994 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms. 17-03-18 04:13:15.994 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms. 17-03-18 04:13:15.994 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 36769 150\n [Camera] 17-03-18 04:13:16.194 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:16.614 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:16.614 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:16.614 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:16.614 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:16.614 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 04:13:16.614 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:16.614 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:16.614 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:16.614 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:16.614 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) start. 17-03-18 04:13:16.644 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:16.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:16.804 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36769 802 17-03-18 04:13:16.954 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:16.994 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 04:13:16.994 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-18 04:13:16.994 -07 000000590 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:16.994 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 04:13:16.994 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 04:13:16.994 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:16.994 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:16.994 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 04:13:16.994 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:17.004 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 04:13:17.154 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:17.154 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:17.154 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:17.154 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:17.154 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) start. 17-03-18 04:13:17.164 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:17.164 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:17.164 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:17.164 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:17.164 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start. 17-03-18 04:13:17.344 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:13:17.344 -07 000000618 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:17.344 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 36769 150' command took 2 ms to send, 1339 ms to get response, and 1352 ms overall 17-03-18 04:13:17.484 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.167974 17-03-18 04:13:17.484 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16797 mm 17-03-18 04:13:17.484 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:17.494 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 36694, sync = True, waitForSettling = False) 17-03-18 04:13:17.494 -07 000000447 INF: Z Motor: Moving to -0.167974 mm, started at -0.167509 mm, distance = -0.47 um 17-03-18 04:13:17.494 -07 000000625 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True) 17-03-18 04:13:17.494 -07 000000625 INF: Y Motor: Moving to 70.7026 mm, started at 69.8623 mm, delta = 0.8403 mm 17-03-18 04:13:17.494 -07 000000447 INF: FPGA: Xmit ZDACW 36694\n [Z Motor] 17-03-18 04:13:17.494 -07 000000512 INF: FPGA: Recv ZDACW 17-03-18 04:13:17.504 -07 000000447 INF: FPGA: 'ZDACW 36694' command took 1 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:13:17.504 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:17.504 -07 000000474 INF: FPGA: Recv YRDPOS 143078 17-03-18 04:13:17.514 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:17.514 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 17 ms overall 17-03-18 04:13:17.514 -07 000000625 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:17.514 -07 000000625 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:17.514 -07 000000625 INF: Y Motor: Moving 1344 steps-22 17-03-18 04:13:17.514 -07 000000012 INF: FPGA: Recv ZDACR 36694 17-03-18 04:13:17.524 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:17.524 -07 000000447 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet)) 17-03-18 04:13:17.524 -07 000000625 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:17.544 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 386 ms. 17-03-18 04:13:17.544 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms. 17-03-18 04:13:17.544 -07 000000479 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:17.554 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:17.554 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) end. Duration was 394 ms. 17-03-18 04:13:17.554 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms. 17-03-18 04:13:17.554 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:17.554 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms. 17-03-18 04:13:17.564 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-18 04:13:17.564 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms. 17-03-18 04:13:17.894 -07 000000487 INF: FPGA: Recv YMVTILE 17-03-18 04:13:17.894 -07 000000625 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall 17-03-18 04:13:17.944 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:17.954 -07 000000618 INF: FPGA: Recv YRDPOS 144768 17-03-18 04:13:17.954 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 04:13:17.954 -07 000000625 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:17.954 -07 000000625 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 04:13:17.954 -07 000000625 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.840 mm, average velocity = 2.166 mm/sec 17-03-18 04:13:18.904 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:18.904 -07 000000474 INF: FPGA: Recv YRDPOS 144768 17-03-18 04:13:18.914 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:18.914 -07 000000625 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:18.944 -07 000000625 INF: Y Motor: After move to 70.702606, error = -0.015106, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:18.944 -07 000000625 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:18.944 -07 000000625 INF: Y Motor: Moved to 70.6875 after 1447 ms (table move) 17-03-18 04:13:18.944 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167974 mm (DAC = 36694) 17-03-18 04:13:18.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:18.944 -07 000000512 INF: FPGA: Recv ZSGSRD 35431 17-03-18 04:13:18.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:18.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:18.954 -07 000000437 INF: FPGA: Recv ZSGSRD 35438 17-03-18 04:13:18.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:18.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:18.964 -07 000000487 INF: FPGA: Recv ZSGSRD 35445 17-03-18 04:13:18.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:18.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:18.974 -07 000000474 INF: FPGA: Recv ZSGSRD 35430 17-03-18 04:13:18.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:18.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:18.984 -07 000000585 INF: FPGA: Recv ZSGSRD 35431 17-03-18 04:13:18.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:18.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:18.994 -07 000000626 INF: FPGA: Recv ZSGSRD 35437 17-03-18 04:13:19.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.004 -07 000000611 INF: FPGA: Recv ZSGSRD 35441 17-03-18 04:13:19.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.014 -07 000000501 INF: FPGA: Recv ZSGSRD 35437 17-03-18 04:13:19.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.024 -07 000000579 INF: FPGA: Recv ZSGSRD 35440 17-03-18 04:13:19.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.034 -07 000000625 INF: FPGA: Recv ZSGSRD 35440 17-03-18 04:13:19.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.044 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:19.044 -07 000000579 INF: FPGA: Recv ZPIEZORD 31233 17-03-18 04:13:19.054 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.054 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.599 V. Piezo Error = -9.3 V. 17-03-18 04:13:19.054 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.0 um, Read 10 ADC samples: Avg = 35437 (-167.1 uncal um), Error = 0.9 uncal um, Median = 35438 (-167.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35430 (-167.1 uncal um), Max = 35445 (-167.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:13:19.054 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35437, posNoise = 8, negNoise = 7 17-03-18 04:13:19.054 -07 000000610 INF: Z Motor: After move to -0.167974, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:19.054 -07 000000610 INF: Z Motor: Settle wait time = 1450 ms, measure time = 108 ms (allowed 150 ms), total time = 1558 ms 17-03-18 04:13:19.054 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:19.104 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1610 ms 17-03-18 04:13:19.104 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:19.104 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6875, Z-position -0.167978157678718. ---------- 17-03-18 04:13:19.104 -07 000000610 INF: Cycle 122 Tile 14 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:19.104 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36517, sync = True, waitForSettling = True) 17-03-18 04:13:19.104 -07 000000610 INF: Z Motor: Moving to -0.167164 mm, started at -0.167978 mm, distance = 0.81 um 17-03-18 04:13:19.104 -07 000000610 INF: FPGA: Xmit ZDACW 36517\n [Z Motor] 17-03-18 04:13:19.104 -07 000000501 INF: FPGA: Recv ZDACW 17-03-18 04:13:19.114 -07 000000610 INF: FPGA: 'ZDACW 36517' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:13:19.114 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:19.114 -07 000000608 INF: FPGA: Recv ZDACR 36517 17-03-18 04:13:19.124 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.124 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:19.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.274 -07 000000012 INF: FPGA: Recv ZSGSRD 35306 17-03-18 04:13:19.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:19.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.284 -07 000000487 INF: FPGA: Recv ZSGSRD 35316 17-03-18 04:13:19.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.294 -07 000000579 INF: FPGA: Recv ZSGSRD 35309 17-03-18 04:13:19.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.304 -07 000000625 INF: FPGA: Recv ZSGSRD 35308 17-03-18 04:13:19.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.314 -07 000000447 INF: FPGA: Recv ZSGSRD 35311 17-03-18 04:13:19.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.324 -07 000000012 INF: FPGA: Recv ZSGSRD 35312 17-03-18 04:13:19.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.334 -07 000000501 INF: FPGA: Recv ZSGSRD 35318 17-03-18 04:13:19.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.344 -07 000000474 INF: FPGA: Recv ZSGSRD 35313 17-03-18 04:13:19.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.354 -07 000000626 INF: FPGA: Recv ZSGSRD 35310 17-03-18 04:13:19.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:19.364 -07 000000608 INF: FPGA: Recv ZSGSRD 35313 17-03-18 04:13:19.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.374 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:19.374 -07 000000480 INF: FPGA: Recv ZPIEZORD 31018 17-03-18 04:13:19.384 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:19.384 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.572 V. Piezo Error = -9.5 V. 17-03-18 04:13:19.384 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.2 um, Read 10 ADC samples: Avg = 35312 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35312 (-166.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35306 (-166.3 uncal um), Max = 35318 (-166.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:13:19.384 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35312, posNoise = 6, negNoise = 6 17-03-18 04:13:19.384 -07 000000610 INF: Z Motor: After move to -0.167164, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:19.384 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:13:19.384 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:19.384 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:19.384 -07 000000479 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:19.384 -07 000000585 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:19.384 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:19.384 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:19.384 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:19.384 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:19.384 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 04:13:19.384 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:19.384 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:19.384 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:19.394 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:19.394 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:19.394 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:13:19.394 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:19.394 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 04:13:19.394 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 04:13:19.404 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms. 17-03-18 04:13:19.404 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms. 17-03-18 04:13:19.404 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 36694 150\n [Camera] 17-03-18 04:13:19.604 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:20.024 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:20.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:20.024 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:20.024 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:20.024 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:20.024 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:20.034 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:20.034 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-18 04:13:20.034 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:20.034 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:13:20.214 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36694 802 17-03-18 04:13:20.364 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:20.404 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 368 ms. 17-03-18 04:13:20.404 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms. 17-03-18 04:13:20.404 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:20.404 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 373 ms. 17-03-18 04:13:20.404 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 04:13:20.404 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:20.404 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:20.404 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:20.404 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 04:13:20.414 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms. 17-03-18 04:13:20.564 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:20.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:20.564 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:20.574 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:20.574 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:20.574 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:20.574 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:20.574 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) start. 17-03-18 04:13:20.574 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:20.574 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:13:20.754 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:13:20.754 -07 000000438 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:20.754 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 36694 150' command took 2 ms to send, 1339 ms to get response, and 1352 ms overall 17-03-18 04:13:20.764 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.167844 17-03-18 04:13:20.764 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16784 mm 17-03-18 04:13:20.764 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:20.764 -07 000000479 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True) 17-03-18 04:13:20.764 -07 000000479 INF: Y Motor: Moving to 71.5326 mm, started at 70.6875 mm, delta = 0.8451 mm 17-03-18 04:13:20.764 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:20.764 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 36666, sync = True, waitForSettling = False) 17-03-18 04:13:20.764 -07 000000480 INF: Z Motor: Moving to -0.167846 mm, started at -0.167175 mm, distance = -0.67 um 17-03-18 04:13:20.764 -07 000000611 INF: FPGA: Recv YRDPOS 144768 17-03-18 04:13:20.774 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:13:20.774 -07 000000479 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:20.774 -07 000000479 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:20.774 -07 000000480 INF: FPGA: Xmit ZDACW 36666\n [Z Motor] 17-03-18 04:13:20.774 -07 000000479 INF: Y Motor: Moving 1352 steps-31 17-03-18 04:13:20.774 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 04:13:20.784 -07 000000480 INF: FPGA: 'ZDACW 36666' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 04:13:20.784 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:20.784 -07 000000487 INF: FPGA: Recv ZDACR 36666 17-03-18 04:13:20.794 -07 000000479 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:20.794 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:20.794 -07 000000480 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet)) 17-03-18 04:13:20.964 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 395 ms. 17-03-18 04:13:20.964 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-18 04:13:20.964 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:20.974 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:20.974 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-18 04:13:20.974 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) end. Duration was 400 ms. 17-03-18 04:13:20.974 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-18 04:13:20.974 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:20.974 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:20.984 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms. 17-03-18 04:13:21.004 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.978563, 17-03-18 04:13:21.164 -07 000000625 INF: FPGA: Recv YMVTILE 17-03-18 04:13:21.164 -07 000000479 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 04:13:21.214 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:21.214 -07 000000512 INF: FPGA: Recv YRDPOS 146468 17-03-18 04:13:21.224 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:21.224 -07 000000479 INF: Y Motor: Encoder = 146468 = motor step 114428.1 = 71.5176 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:21.224 -07 000000479 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 04:13:21.224 -07 000000479 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.129 mm/sec 17-03-18 04:13:21.644 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:21.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:22.174 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:22.174 -07 000000474 INF: FPGA: Recv YRDPOS 146468 17-03-18 04:13:22.184 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:22.184 -07 000000479 INF: Y Motor: Encoder = 146468 = motor step 114428.1 = 71.5176 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:22.214 -07 000000479 INF: Y Motor: After move to 71.532608, error = -0.015030, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:22.214 -07 000000479 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:22.214 -07 000000479 INF: Y Motor: Moved to 71.5176 after 1445 ms (table move) 17-03-18 04:13:22.214 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167846 mm (DAC = 36666) 17-03-18 04:13:22.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.214 -07 000000611 INF: FPGA: Recv ZSGSRD 35417 17-03-18 04:13:22.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:13:22.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.224 -07 000000455 INF: FPGA: Recv ZSGSRD 35415 17-03-18 04:13:22.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.234 -07 000000447 INF: FPGA: Recv ZSGSRD 35428 17-03-18 04:13:22.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.244 -07 000000480 INF: FPGA: Recv ZSGSRD 35418 17-03-18 04:13:22.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.254 -07 000000444 INF: FPGA: Recv ZSGSRD 35421 17-03-18 04:13:22.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.264 -07 000000611 INF: FPGA: Recv ZSGSRD 35410 17-03-18 04:13:22.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.274 -07 000000474 INF: FPGA: Recv ZSGSRD 35414 17-03-18 04:13:22.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.284 -07 000000447 INF: FPGA: Recv ZSGSRD 35415 17-03-18 04:13:22.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.294 -07 000000611 INF: FPGA: Recv ZSGSRD 35413 17-03-18 04:13:22.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.304 -07 000000487 INF: FPGA: Recv ZSGSRD 35419 17-03-18 04:13:22.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.314 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:22.314 -07 000000437 INF: FPGA: Recv ZPIEZORD 31195 17-03-18 04:13:22.324 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.324 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.595 V. Piezo Error = -9.3 V. 17-03-18 04:13:22.324 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.8 um, Read 10 ADC samples: Avg = 35417 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35416 (-167.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 35410 (-166.9 uncal um), Max = 35428 (-167.1 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:13:22.324 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35417, posNoise = 11, negNoise = 7 17-03-18 04:13:22.324 -07 000000610 INF: Z Motor: After move to -0.167846, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:22.324 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 106 ms (allowed 150 ms), total time = 1554 ms 17-03-18 04:13:22.324 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:22.374 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms 17-03-18 04:13:22.374 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:22.374 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.517578125, Z-position -0.167849673435883. ---------- 17-03-18 04:13:22.374 -07 000000610 INF: Cycle 122 Tile 15 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:22.374 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36489, sync = True, waitForSettling = True) 17-03-18 04:13:22.374 -07 000000610 INF: Z Motor: Moving to -0.167036 mm, started at -0.167850 mm, distance = 0.81 um 17-03-18 04:13:22.374 -07 000000610 INF: FPGA: Xmit ZDACW 36489\n [Z Motor] 17-03-18 04:13:22.374 -07 000000444 INF: FPGA: Recv ZDACW 17-03-18 04:13:22.384 -07 000000610 INF: FPGA: 'ZDACW 36489' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:13:22.384 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:22.384 -07 000000618 INF: FPGA: Recv ZDACR 36489 17-03-18 04:13:22.394 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.394 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:22.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.544 -07 000000611 INF: FPGA: Recv ZSGSRD 35287 17-03-18 04:13:22.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:22.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.554 -07 000000626 INF: FPGA: Recv ZSGSRD 35292 17-03-18 04:13:22.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.564 -07 000000447 INF: FPGA: Recv ZSGSRD 35300 17-03-18 04:13:22.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.574 -07 000000501 INF: FPGA: Recv ZSGSRD 35287 17-03-18 04:13:22.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.584 -07 000000579 INF: FPGA: Recv ZSGSRD 35292 17-03-18 04:13:22.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.594 -07 000000455 INF: FPGA: Recv ZSGSRD 35293 17-03-18 04:13:22.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.604 -07 000000561 INF: FPGA: Recv ZSGSRD 35288 17-03-18 04:13:22.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.614 -07 000000455 INF: FPGA: Recv ZSGSRD 35297 17-03-18 04:13:22.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.624 -07 000000487 INF: FPGA: Recv ZSGSRD 35287 17-03-18 04:13:22.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:22.634 -07 000000480 INF: FPGA: Recv ZSGSRD 35296 17-03-18 04:13:22.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:22.644 -07 000000444 INF: FPGA: Recv ZPIEZORD 31028 17-03-18 04:13:22.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:22.654 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.568 V. Piezo Error = -9.4 V. 17-03-18 04:13:22.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35292 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35292 (-166.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35287 (-166.1 uncal um), Max = 35300 (-166.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:13:22.654 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35292, posNoise = 8, negNoise = 5 17-03-18 04:13:22.654 -07 000000610 INF: Z Motor: After move to -0.167036, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:22.654 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:13:22.654 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:22.654 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:22.654 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:22.654 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:22.654 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:22.654 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:22.654 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:22.654 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:22.654 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-18 04:13:22.654 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:22.654 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:22.654 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:22.664 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:22.664 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:22.664 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:13:22.664 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:22.674 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 04:13:22.674 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:13:22.674 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 04:13:22.674 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:13:22.674 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 36666 150\n [Camera] 17-03-18 04:13:22.884 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 193 17-03-18 04:13:23.294 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:23.294 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:23.294 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:23.294 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:23.294 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) start. 17-03-18 04:13:23.294 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:23.294 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:23.294 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:23.294 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:23.294 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) start. 17-03-18 04:13:23.484 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36666 802 17-03-18 04:13:23.634 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:23.674 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) end. Duration was 382 ms. 17-03-18 04:13:23.674 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 04:13:23.674 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:23.684 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) end. Duration was 381 ms. 17-03-18 04:13:23.684 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms. 17-03-18 04:13:23.684 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:23.684 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:23.684 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 04:13:23.684 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:23.694 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 04:13:23.834 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:23.834 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:23.834 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:23.954 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:23.954 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:23.954 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:23.964 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:23.964 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-18 04:13:23.964 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:23.964 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:13:24.034 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:13:24.034 -07 000000487 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:24.034 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 36666 150' command took 2 ms to send, 1340 ms to get response, and 1351 ms overall 17-03-18 04:13:24.034 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.167464 17-03-18 04:13:24.034 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.16746 mm 17-03-18 04:13:24.034 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:24.034 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True) 17-03-18 04:13:24.034 -07 000000618 INF: Y Motor: Moving to 72.3626 mm, started at 71.5176 mm, delta = 0.8450 mm 17-03-18 04:13:24.034 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 36582, sync = True, waitForSettling = False) 17-03-18 04:13:24.034 -07 000000501 INF: Z Motor: Moving to -0.167462 mm, started at -0.167047 mm, distance = -0.42 um 17-03-18 04:13:24.034 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:24.034 -07 000000611 INF: FPGA: Recv YRDPOS 146469 17-03-18 04:13:24.044 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:24.044 -07 000000618 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:24.044 -07 000000501 INF: FPGA: Xmit ZDACW 36582\n [Z Motor] 17-03-18 04:13:24.044 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 04:13:24.044 -07 000000618 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:24.044 -07 000000618 INF: Y Motor: Moving 1351 steps-31 17-03-18 04:13:24.054 -07 000000501 INF: FPGA: 'ZDACW 36582' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 04:13:24.054 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:24.064 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:24.064 -07 000000625 INF: FPGA: Recv ZDACR 36582 17-03-18 04:13:24.074 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:24.074 -07 000000501 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet)) 17-03-18 04:13:24.334 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 373 ms. 17-03-18 04:13:24.334 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-18 04:13:24.334 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:24.334 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 04:13:24.334 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 04:13:24.334 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:24.344 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:24.344 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:24.344 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 502 ms. 17-03-18 04:13:24.354 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 04:13:24.424 -07 000000438 INF: FPGA: Recv YMVTILE 17-03-18 04:13:24.424 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall 17-03-18 04:13:24.484 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:24.484 -07 000000437 INF: FPGA: Recv YRDPOS 148170 17-03-18 04:13:24.494 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:13:24.494 -07 000000618 INF: Y Motor: Encoder = 148170 = motor step 115757.8 = 72.3486 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:24.494 -07 000000618 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm) 17-03-18 04:13:24.494 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.845 mm, average velocity = 2.206 mm/sec 17-03-18 04:13:25.444 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:25.444 -07 000000474 INF: FPGA: Recv YRDPOS 148170 17-03-18 04:13:25.454 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:25.454 -07 000000618 INF: Y Motor: Encoder = 148170 = motor step 115757.8 = 72.3486 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:25.474 -07 000000618 INF: Y Motor: After move to 72.362610, error = -0.013977, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:25.474 -07 000000618 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:25.484 -07 000000618 INF: Y Motor: Moved to 72.3486 after 1444 ms (table move) 17-03-18 04:13:25.484 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167462 mm (DAC = 36582) 17-03-18 04:13:25.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.484 -07 000000012 INF: FPGA: Recv ZSGSRD 35355 17-03-18 04:13:25.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:25.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.494 -07 000000474 INF: FPGA: Recv ZSGSRD 35355 17-03-18 04:13:25.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.504 -07 000000487 INF: FPGA: Recv ZSGSRD 35357 17-03-18 04:13:25.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.514 -07 000000437 INF: FPGA: Recv ZSGSRD 35357 17-03-18 04:13:25.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.524 -07 000000480 INF: FPGA: Recv ZSGSRD 35359 17-03-18 04:13:25.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.534 -07 000000590 INF: FPGA: Recv ZSGSRD 35356 17-03-18 04:13:25.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.544 -07 000000625 INF: FPGA: Recv ZSGSRD 35355 17-03-18 04:13:25.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.554 -07 000000579 INF: FPGA: Recv ZSGSRD 35360 17-03-18 04:13:25.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.564 -07 000000474 INF: FPGA: Recv ZSGSRD 35359 17-03-18 04:13:25.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.574 -07 000000579 INF: FPGA: Recv ZSGSRD 35359 17-03-18 04:13:25.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.584 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:25.584 -07 000000625 INF: FPGA: Recv ZPIEZORD 31116 17-03-18 04:13:25.594 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.594 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.582 V. Piezo Error = -9.3 V. 17-03-18 04:13:25.594 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.5 um, Read 10 ADC samples: Avg = 35357 (-166.6 uncal um), Error = 0.9 uncal um, Median = 35357 (-166.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 35355 (-166.6 uncal um), Max = 35360 (-166.6 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um) 17-03-18 04:13:25.594 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35357, posNoise = 3, negNoise = 2 17-03-18 04:13:25.594 -07 000000610 INF: Z Motor: After move to -0.167462, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:25.594 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 107 ms (allowed 150 ms), total time = 1554 ms 17-03-18 04:13:25.594 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:25.644 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms 17-03-18 04:13:25.644 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:25.644 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.3486328125, Z-position -0.167464220707377. ---------- 17-03-18 04:13:25.644 -07 000000610 INF: Cycle 122 Tile 16 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:25.644 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36406, sync = True, waitForSettling = True) 17-03-18 04:13:25.644 -07 000000610 INF: Z Motor: Moving to -0.166656 mm, started at -0.167464 mm, distance = 0.81 um 17-03-18 04:13:25.644 -07 000000610 INF: FPGA: Xmit ZDACW 36406\n [Z Motor] 17-03-18 04:13:25.644 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 04:13:25.654 -07 000000610 INF: FPGA: 'ZDACW 36406' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:13:25.654 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:25.654 -07 000000444 INF: FPGA: Recv ZDACR 36406 17-03-18 04:13:25.664 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.664 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:25.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.814 -07 000000501 INF: FPGA: Recv ZSGSRD 35236 17-03-18 04:13:25.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:25.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.824 -07 000000512 INF: FPGA: Recv ZSGSRD 35234 17-03-18 04:13:25.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.834 -07 000000561 INF: FPGA: Recv ZSGSRD 35230 17-03-18 04:13:25.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.844 -07 000000438 INF: FPGA: Recv ZSGSRD 35230 17-03-18 04:13:25.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.854 -07 000000618 INF: FPGA: Recv ZSGSRD 35227 17-03-18 04:13:25.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.864 -07 000000512 INF: FPGA: Recv ZSGSRD 35235 17-03-18 04:13:25.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.874 -07 000000480 INF: FPGA: Recv ZSGSRD 35232 17-03-18 04:13:25.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.884 -07 000000012 INF: FPGA: Recv ZSGSRD 35231 17-03-18 04:13:25.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.894 -07 000000487 INF: FPGA: Recv ZSGSRD 35238 17-03-18 04:13:25.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:25.904 -07 000000012 INF: FPGA: Recv ZSGSRD 35228 17-03-18 04:13:25.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.914 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:25.914 -07 000000512 INF: FPGA: Recv ZPIEZORD 30926 17-03-18 04:13:25.924 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:25.924 -07 000000610 INF: Z Motor: Piezo is near 46.1 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.555 V. Piezo Error = -9.5 V. 17-03-18 04:13:25.924 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.7 um, Read 10 ADC samples: Avg = 35232 (-165.8 uncal um), Error = 0.9 uncal um, Median = 35232 (-165.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35227 (-165.8 uncal um), Max = 35238 (-165.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:13:25.924 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35232, posNoise = 6, negNoise = 5 17-03-18 04:13:25.924 -07 000000610 INF: Z Motor: After move to -0.166656, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:25.924 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:13:25.924 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:25.924 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:25.924 -07 000000585 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:25.924 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:25.924 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:25.924 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:25.924 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:25.924 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:25.924 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 04:13:25.924 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:25.924 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 3 ms. 17-03-18 04:13:25.924 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:25.934 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:25.934 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:25.934 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:13:25.934 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:25.944 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 04:13:25.944 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 04:13:25.944 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 04:13:25.944 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms. 17-03-18 04:13:25.954 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 36582 150\n [Camera] 17-03-18 04:13:26.144 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:26.364 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.98264, 17-03-18 04:13:26.564 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:26.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:26.564 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:26.574 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:26.574 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:26.574 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:26.574 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:26.574 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:13:26.574 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:26.574 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 04:13:26.644 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:26.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:26.754 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36582 802 17-03-18 04:13:26.904 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:26.954 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 04:13:26.954 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 04:13:26.954 -07 000000012 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:26.954 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 379 ms. 17-03-18 04:13:26.954 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-18 04:13:26.954 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:26.954 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-18 04:13:26.954 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 04:13:26.954 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:26.964 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 04:13:27.104 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:27.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:27.114 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:27.114 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:27.114 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) start. 17-03-18 04:13:27.114 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:27.114 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:27.114 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:27.224 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:27.224 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start. 17-03-18 04:13:27.304 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:13:27.304 -07 000000590 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:27.304 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 36582 150' command took 2 ms to send, 1341 ms to get response, and 1351 ms overall 17-03-18 04:13:27.304 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 04:13:27.304 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.3486328125, Z-Position -0.166661194189657. ------ 17-03-18 04:13:27.304 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:13:27.304 -07 000000012 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.17310 mm 17-03-18 04:13:27.304 -07 000000012 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:27.304 -07 000000625 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:13:27.314 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:27.314 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 04:13:27.314 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 37814, sync = True, waitForSettling = False) 17-03-18 04:13:27.314 -07 000000618 INF: Z Motor: Moving to -0.173101 mm, started at -0.166661 mm, distance = -6.44 um 17-03-18 04:13:27.314 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True) 17-03-18 04:13:27.314 -07 000000611 INF: Y Motor: Moving to 73.1926 mm, started at 72.3486 mm, delta = 0.8440 mm 17-03-18 04:13:27.324 -07 000000618 INF: FPGA: Xmit ZDACW 37814\n [Z Motor] 17-03-18 04:13:27.324 -07 000000438 INF: FPGA: Recv ZDACW 17-03-18 04:13:27.334 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:27.334 -07 000000618 INF: FPGA: 'ZDACW 37814' command took 0 ms to send, 0 ms to get response, and 14 ms overall 17-03-18 04:13:27.334 -07 000000590 INF: FPGA: Recv YRDPOS 148170 17-03-18 04:13:27.344 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall 17-03-18 04:13:27.344 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:27.344 -07 000000611 INF: Y Motor: Encoder = 148170 = motor step 115757.8 = 72.3486 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:27.344 -07 000000611 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:27.344 -07 000000611 INF: Y Motor: Moving 1350 steps-29 17-03-18 04:13:27.344 -07 000000487 INF: FPGA: Recv ZDACR 37814 17-03-18 04:13:27.354 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:27.354 -07 000000618 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet)) 17-03-18 04:13:27.354 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:27.504 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) end. Duration was 393 ms. 17-03-18 04:13:27.504 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms. 17-03-18 04:13:27.504 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:27.504 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:27.504 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms. 17-03-18 04:13:27.514 -07 000000480 INF: FPGA: Recv FOCMRRFOC 17-03-18 04:13:27.514 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 203 ms overall 17-03-18 04:13:27.604 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 04:13:27.604 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 04:13:27.604 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:27.604 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:27.614 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 501 ms. 17-03-18 04:13:27.724 -07 000000438 INF: FPGA: Recv YMVTILE 17-03-18 04:13:27.724 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 04:13:27.784 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:27.784 -07 000000438 INF: FPGA: Recv YRDPOS 149862 17-03-18 04:13:27.794 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:27.794 -07 000000611 INF: Y Motor: Encoder = 149862 = motor step 117079.7 = 73.1748 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:27.794 -07 000000611 INF: Y Motor: Position error before settling (table move) = -36 encoder counts (-0.018 mm) 17-03-18 04:13:27.794 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.844 mm, average velocity = 2.181 mm/sec 17-03-18 04:13:28.744 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:28.744 -07 000000590 INF: FPGA: Recv YRDPOS 149862 17-03-18 04:13:28.754 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:28.754 -07 000000611 INF: Y Motor: Encoder = 149862 = motor step 117079.7 = 73.1748 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:28.784 -07 000000611 INF: Y Motor: After move to 73.192604, error = -0.017799, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:28.784 -07 000000611 INF: Y Motor: Position error after settling (table move) = -36 encoder counts (-0.018 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:28.784 -07 000000611 INF: Y Motor: Moved to 73.1748 after 1464 ms (table move) 17-03-18 04:13:28.784 -07 000000012 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173101 mm (DAC = 37814) 17-03-18 04:13:28.784 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:28.784 -07 000000480 INF: FPGA: Recv ZSGSRD 36242 17-03-18 04:13:28.794 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:13:28.794 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:28.794 -07 000000455 INF: FPGA: Recv ZSGSRD 36232 17-03-18 04:13:28.804 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:28.804 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:28.804 -07 000000512 INF: FPGA: Recv ZSGSRD 36240 17-03-18 04:13:28.814 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:28.814 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:28.814 -07 000000585 INF: FPGA: Recv ZSGSRD 36234 17-03-18 04:13:28.824 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:28.824 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:28.824 -07 000000444 INF: FPGA: Recv ZSGSRD 36235 17-03-18 04:13:28.834 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:28.834 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:28.834 -07 000000480 INF: FPGA: Recv ZSGSRD 36235 17-03-18 04:13:28.844 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:28.844 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:28.844 -07 000000455 INF: FPGA: Recv ZSGSRD 36243 17-03-18 04:13:28.854 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:28.854 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:28.854 -07 000000479 INF: FPGA: Recv ZSGSRD 36239 17-03-18 04:13:28.864 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:28.864 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:28.864 -07 000000438 INF: FPGA: Recv ZSGSRD 36236 17-03-18 04:13:28.874 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:28.874 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:28.874 -07 000000474 INF: FPGA: Recv ZSGSRD 36240 17-03-18 04:13:28.884 -07 000000012 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:28.884 -07 000000012 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:28.884 -07 000000479 INF: FPGA: Recv ZPIEZORD 32279 17-03-18 04:13:28.894 -07 000000012 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:28.894 -07 000000012 INF: Z Motor: Piezo is near 49.0 V (nominally 0 to 100 V), expect near 57.7 V, since DAC is at 5.770 V. Piezo Error = -8.7 V. 17-03-18 04:13:28.894 -07 000000012 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.1 um, Read 10 ADC samples: Avg = 36238 (-172.2 uncal um), Error = 0.9 uncal um, Median = 36238 (-172.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36232 (-172.2 uncal um), Max = 36243 (-172.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:13:28.894 -07 000000012 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36238, posNoise = 5, negNoise = 6 17-03-18 04:13:28.894 -07 000000012 INF: Z Motor: After move to -0.173101, error = -0.000023, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:28.894 -07 000000012 INF: Z Motor: Settle wait time = 1468 ms, measure time = 107 ms (allowed 150 ms), total time = 1575 ms 17-03-18 04:13:28.894 -07 000000012 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:28.944 -07 000000012 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1633 ms 17-03-18 04:13:28.944 -07 000000012 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:28.944 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:28.944 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:28.944 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:28.944 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:28.944 -07 000000585 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 04:13:28.944 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:28.944 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:28.944 -07 000000585 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 04:13:28.944 -07 000000585 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 04:13:28.944 -07 000000585 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 04:13:28.964 -07 000000585 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-18 04:13:28.964 -07 000000585 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms. 17-03-18 04:13:28.964 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 04:13:29.014 -07 000000474 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 04:13:29.314 -07 000000618 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 04:13:29.314 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 04:13:29.314 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 04:13:29.314 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) start. 17-03-18 04:13:29.354 -07 000000455 INF: FPGA: Recv @CAMSNAP 380 17-03-18 04:13:29.354 -07 000000608 INF: FPGA: Recv CAMSNAP 17-03-18 04:13:29.354 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall 17-03-18 04:13:29.434 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) end. Duration was 124 ms. 17-03-18 04:13:29.434 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:29.434 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms. 17-03-18 04:13:29.434 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 127 ms. 17-03-18 04:13:29.454 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:13:29.454 -07 000000501 INF: Autofocus start 17-03-18 04:13:29.454 -07 000000501 INF: MeasureProfile start 17-03-18 04:13:29.454 -07 000000626 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:13:29.464 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:29.464 -07 000000561 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 04:13:29.464 -07 000000501 INF: MeasureProfile done 17-03-18 04:13:29.464 -07 000000501 INF: X=-16 Z correction [um]=-0.1496812 17-03-18 04:13:29.464 -07 000000501 INF: Autofocus finished 17-03-18 04:13:29.664 -07 000000437 INF: FPGA: Recv FOCMRRIMG 17-03-18 04:13:29.664 -07 000000561 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall 17-03-18 04:13:29.664 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.1748046875, Z-position -0.173123951604269. ---------- 17-03-18 04:13:29.664 -07 000000610 INF: Cycle 122 Tile 17 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:29.674 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36294, sync = True, waitForSettling = True) 17-03-18 04:13:29.674 -07 000000610 INF: Z Motor: Moving to -0.166143 mm, started at -0.173124 mm, distance = 6.98 um 17-03-18 04:13:29.674 -07 000000610 INF: FPGA: Xmit ZDACW 36294\n [Z Motor] 17-03-18 04:13:29.674 -07 000000608 INF: FPGA: Recv ZDACW 17-03-18 04:13:29.684 -07 000000610 INF: FPGA: 'ZDACW 36294' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:29.684 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:29.684 -07 000000437 INF: FPGA: Recv ZDACR 36294 17-03-18 04:13:29.694 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:29.694 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:29.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:29.844 -07 000000474 INF: FPGA: Recv ZSGSRD 35145 17-03-18 04:13:29.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:29.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:29.854 -07 000000608 INF: FPGA: Recv ZSGSRD 35151 17-03-18 04:13:29.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:29.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:29.864 -07 000000626 INF: FPGA: Recv ZSGSRD 35154 17-03-18 04:13:29.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:29.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:29.874 -07 000000618 INF: FPGA: Recv ZSGSRD 35155 17-03-18 04:13:29.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:29.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:29.884 -07 000000585 INF: FPGA: Recv ZSGSRD 35152 17-03-18 04:13:29.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:29.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:29.894 -07 000000474 INF: FPGA: Recv ZSGSRD 35155 17-03-18 04:13:29.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:29.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:29.904 -07 000000444 INF: FPGA: Recv ZSGSRD 35152 17-03-18 04:13:29.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:29.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:29.914 -07 000000438 INF: FPGA: Recv ZSGSRD 35154 17-03-18 04:13:29.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:29.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:29.924 -07 000000590 INF: FPGA: Recv ZSGSRD 35156 17-03-18 04:13:29.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:29.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:29.934 -07 000000012 INF: FPGA: Recv ZSGSRD 35149 17-03-18 04:13:29.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:29.944 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:29.944 -07 000000625 INF: FPGA: Recv ZPIEZORD 30820 17-03-18 04:13:29.954 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:29.954 -07 000000610 INF: Z Motor: Piezo is near 45.8 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.538 V. Piezo Error = -9.5 V. 17-03-18 04:13:29.954 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.1 um, Read 10 ADC samples: Avg = 35152 (-165.3 uncal um), Error = 0.9 uncal um, Median = 35153 (-165.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35145 (-165.2 uncal um), Max = 35156 (-165.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:13:29.954 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35152, posNoise = 4, negNoise = 7 17-03-18 04:13:29.954 -07 000000610 INF: Z Motor: After move to -0.166143, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:29.954 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-18 04:13:29.954 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:29.954 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:29.954 -07 000000474 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:29.954 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:29.954 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:29.954 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:29.954 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:29.954 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:29.954 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:29.954 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:29.954 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-18 04:13:29.954 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:29.964 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:13:29.964 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:29.964 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-18 04:13:29.964 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:29.974 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 04:13:29.974 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 04:13:29.974 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 04:13:29.974 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms. 17-03-18 04:13:29.974 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 36471 150\n [Camera] 17-03-18 04:13:30.174 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:30.594 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:30.594 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:30.594 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:30.594 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:30.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:30.594 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:30.594 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:30.594 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:13:30.604 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:30.604 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 04:13:30.784 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36471 802 17-03-18 04:13:30.934 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:30.974 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 369 ms. 17-03-18 04:13:30.974 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms. 17-03-18 04:13:30.974 -07 000000608 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:30.974 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:30.974 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 04:13:30.974 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 04:13:30.974 -07 000000479 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:30.974 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:30.974 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 04:13:30.984 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms. 17-03-18 04:13:31.134 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:31.134 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:31.134 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:31.134 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:31.134 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:31.134 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:31.134 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:31.134 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) start. 17-03-18 04:13:31.144 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:31.144 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) start. 17-03-18 04:13:31.324 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:13:31.324 -07 000000455 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:31.324 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 36471 150' command took 2 ms to send, 1346 ms to get response, and 1354 ms overall 17-03-18 04:13:31.324 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166104 17-03-18 04:13:31.324 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16610 mm 17-03-18 04:13:31.324 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:31.334 -07 000000479 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True) 17-03-18 04:13:31.334 -07 000000479 INF: Y Motor: Moving to 74.0226 mm, started at 73.1748 mm, delta = 0.8478 mm 17-03-18 04:13:31.334 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:31.334 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 36285, sync = True, waitForSettling = False) 17-03-18 04:13:31.334 -07 000000590 INF: Z Motor: Moving to -0.166102 mm, started at -0.166147 mm, distance = 0.05 um 17-03-18 04:13:31.334 -07 000000480 INF: FPGA: Recv YRDPOS 149863 17-03-18 04:13:31.344 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:31.344 -07 000000479 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:31.344 -07 000000590 INF: FPGA: Xmit ZDACW 36285\n [Z Motor] 17-03-18 04:13:31.344 -07 000000479 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:31.344 -07 000000479 INF: Y Motor: Moving 1356 steps-36 17-03-18 04:13:31.344 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 04:13:31.354 -07 000000590 INF: FPGA: 'ZDACW 36285' command took 0 ms to send, 0 ms to get response, and 18 ms overall 17-03-18 04:13:31.354 -07 000000479 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:31.364 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:31.364 -07 000000455 INF: FPGA: Recv ZDACR 36285 17-03-18 04:13:31.374 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:31.374 -07 000000590 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet)) 17-03-18 04:13:31.524 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) end. Duration was 381 ms. 17-03-18 04:13:31.524 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms. 17-03-18 04:13:31.524 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:31.524 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:31.524 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) end. Duration was 384 ms. 17-03-18 04:13:31.524 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 04:13:31.524 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:31.524 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:31.524 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-18 04:13:31.534 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 04:13:31.644 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:31.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:31.724 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.015368, 17-03-18 04:13:31.724 -07 000000611 INF: FPGA: Recv YMVTILE 17-03-18 04:13:31.724 -07 000000479 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall 17-03-18 04:13:31.764 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:31.774 -07 000000474 INF: FPGA: Recv YRDPOS 151566 17-03-18 04:13:31.774 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-18 04:13:31.774 -07 000000479 INF: Y Motor: Encoder = 151566 = motor step 118410.9 = 74.0068 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:31.774 -07 000000479 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm) 17-03-18 04:13:31.774 -07 000000479 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.848 mm, average velocity = 2.208 mm/sec 17-03-18 04:13:32.724 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:32.724 -07 000000501 INF: FPGA: Recv YRDPOS 151566 17-03-18 04:13:32.734 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:32.734 -07 000000479 INF: Y Motor: Encoder = 151566 = motor step 118410.9 = 74.0068 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:32.754 -07 000000479 INF: Y Motor: After move to 74.022606, error = -0.015770, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:32.754 -07 000000479 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:32.754 -07 000000479 INF: Y Motor: Moved to 74.0068 after 1421 ms (table move) 17-03-18 04:13:32.754 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166102 mm (DAC = 36285) 17-03-18 04:13:32.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:32.754 -07 000000480 INF: FPGA: Recv ZSGSRD 35140 17-03-18 04:13:32.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:32.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:32.764 -07 000000512 INF: FPGA: Recv ZSGSRD 35141 17-03-18 04:13:32.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:32.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:32.774 -07 000000561 INF: FPGA: Recv ZSGSRD 35149 17-03-18 04:13:32.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:32.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:32.784 -07 000000487 INF: FPGA: Recv ZSGSRD 35151 17-03-18 04:13:32.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:32.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:32.794 -07 000000608 INF: FPGA: Recv ZSGSRD 35152 17-03-18 04:13:32.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:32.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:32.804 -07 000000618 INF: FPGA: Recv ZSGSRD 35149 17-03-18 04:13:32.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:32.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:32.814 -07 000000625 INF: FPGA: Recv ZSGSRD 35140 17-03-18 04:13:32.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:32.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:32.824 -07 000000618 INF: FPGA: Recv ZSGSRD 35144 17-03-18 04:13:32.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:32.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:32.834 -07 000000585 INF: FPGA: Recv ZSGSRD 35145 17-03-18 04:13:32.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:32.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:32.844 -07 000000579 INF: FPGA: Recv ZSGSRD 35143 17-03-18 04:13:32.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:32.854 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:32.854 -07 000000447 INF: FPGA: Recv ZPIEZORD 30825 17-03-18 04:13:32.864 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:32.864 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.537 V. Piezo Error = -9.5 V. 17-03-18 04:13:32.864 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.1 um, Read 10 ADC samples: Avg = 35145 (-165.2 uncal um), Error = 0.9 uncal um, Median = 35144 (-165.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35140 (-165.2 uncal um), Max = 35152 (-165.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:13:32.864 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35145, posNoise = 7, negNoise = 5 17-03-18 04:13:32.864 -07 000000610 INF: Z Motor: After move to -0.166102, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:32.864 -07 000000610 INF: Z Motor: Settle wait time = 1424 ms, measure time = 104 ms (allowed 150 ms), total time = 1528 ms 17-03-18 04:13:32.864 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:32.914 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1581 ms 17-03-18 04:13:32.914 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:32.914 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0068359375, Z-position -0.166102287733324. ---------- 17-03-18 04:13:32.914 -07 000000610 INF: Cycle 122 Tile 18 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:32.914 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36109, sync = True, waitForSettling = True) 17-03-18 04:13:32.914 -07 000000610 INF: Z Motor: Moving to -0.165296 mm, started at -0.166102 mm, distance = 0.81 um 17-03-18 04:13:32.914 -07 000000610 INF: FPGA: Xmit ZDACW 36109\n [Z Motor] 17-03-18 04:13:32.914 -07 000000437 INF: FPGA: Recv ZDACW 17-03-18 04:13:32.924 -07 000000610 INF: FPGA: 'ZDACW 36109' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:13:32.924 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:32.924 -07 000000455 INF: FPGA: Recv ZDACR 36109 17-03-18 04:13:32.934 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:32.934 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:33.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:33.084 -07 000000487 INF: FPGA: Recv ZSGSRD 35021 17-03-18 04:13:33.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:33.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:33.094 -07 000000474 INF: FPGA: Recv ZSGSRD 35023 17-03-18 04:13:33.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:33.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:33.104 -07 000000625 INF: FPGA: Recv ZSGSRD 35023 17-03-18 04:13:33.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:33.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:33.114 -07 000000437 INF: FPGA: Recv ZSGSRD 35024 17-03-18 04:13:33.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:33.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:33.124 -07 000000455 INF: FPGA: Recv ZSGSRD 35020 17-03-18 04:13:33.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:33.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:33.134 -07 000000479 INF: FPGA: Recv ZSGSRD 35024 17-03-18 04:13:33.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:33.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:33.144 -07 000000501 INF: FPGA: Recv ZSGSRD 35028 17-03-18 04:13:33.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:33.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:33.154 -07 000000561 INF: FPGA: Recv ZSGSRD 35018 17-03-18 04:13:33.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:33.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:33.164 -07 000000608 INF: FPGA: Recv ZSGSRD 35021 17-03-18 04:13:33.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:33.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:33.174 -07 000000444 INF: FPGA: Recv ZSGSRD 35022 17-03-18 04:13:33.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:33.184 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:33.184 -07 000000479 INF: FPGA: Recv ZPIEZORD 30654 17-03-18 04:13:33.194 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:33.194 -07 000000610 INF: Z Motor: Piezo is near 45.5 V (nominally 0 to 100 V), expect near 55.1 V, since DAC is at 5.510 V. Piezo Error = -9.6 V. 17-03-18 04:13:33.194 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.3 um, Read 10 ADC samples: Avg = 35022 (-164.4 uncal um), Error = 0.8 uncal um, Median = 35022 (-164.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35018 (-164.4 uncal um), Max = 35028 (-164.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 04:13:33.194 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35022, posNoise = 6, negNoise = 4 17-03-18 04:13:33.194 -07 000000610 INF: Z Motor: After move to -0.165296, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:33.194 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 04:13:33.194 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:33.194 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:33.194 -07 000000585 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:33.194 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:33.194 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:33.194 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:33.194 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:33.194 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:33.194 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 04:13:33.194 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:33.194 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 04:13:33.194 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:33.204 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:33.204 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:33.204 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:13:33.204 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:33.214 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms. 17-03-18 04:13:33.214 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms. 17-03-18 04:13:33.214 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms. 17-03-18 04:13:33.214 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-18 04:13:33.214 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 36285 150\n [Camera] 17-03-18 04:13:33.414 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:33.834 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:33.834 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:33.834 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:33.834 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:33.834 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 04:13:33.834 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:33.834 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:33.834 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:33.834 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:33.834 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) start. 17-03-18 04:13:34.024 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36285 802 17-03-18 04:13:34.174 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:34.214 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 04:13:34.214 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 04:13:34.214 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:34.214 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:34.214 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 382 ms. 17-03-18 04:13:34.214 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 04:13:34.214 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:34.224 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:34.224 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 04:13:34.224 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 04:13:34.374 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:34.374 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:34.374 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:34.374 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:34.374 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start. 17-03-18 04:13:34.384 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:34.384 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:34.384 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:34.384 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:34.384 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start. 17-03-18 04:13:34.564 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:13:34.564 -07 000000608 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:34.564 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 36285 150' command took 2 ms to send, 1348 ms to get response, and 1351 ms overall 17-03-18 04:13:34.574 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.165567 17-03-18 04:13:34.574 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16557 mm 17-03-18 04:13:34.574 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:34.574 -07 000000474 INF: Z Motor: Entering MoveAbsStepped (DAC = 36168, sync = True, waitForSettling = False) 17-03-18 04:13:34.574 -07 000000474 INF: Z Motor: Moving to -0.165566 mm, started at -0.165312 mm, distance = -0.25 um 17-03-18 04:13:34.574 -07 000000474 INF: FPGA: Xmit ZDACW 36168\n [Z Motor] 17-03-18 04:13:34.574 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True) 17-03-18 04:13:34.574 -07 000000438 INF: Y Motor: Moving to 74.8526 mm, started at 74.0068 mm, delta = 0.8458 mm 17-03-18 04:13:34.574 -07 000000585 INF: FPGA: Recv ZDACW 17-03-18 04:13:34.584 -07 000000474 INF: FPGA: 'ZDACW 36168' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:34.584 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:34.584 -07 000000437 INF: FPGA: Recv YRDPOS 151566 17-03-18 04:13:34.594 -07 000000474 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:34.594 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-18 04:13:34.594 -07 000000438 INF: Y Motor: Encoder = 151566 = motor step 118410.9 = 74.0068 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:34.594 -07 000000438 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:34.594 -07 000000438 INF: Y Motor: Moving 1353 steps-32 17-03-18 04:13:34.594 -07 000000561 INF: FPGA: Recv ZDACR 36168 17-03-18 04:13:34.604 -07 000000474 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:34.604 -07 000000474 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet)) 17-03-18 04:13:34.604 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:34.764 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 386 ms. 17-03-18 04:13:34.764 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 04:13:34.764 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:34.764 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 383 ms. 17-03-18 04:13:34.764 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-18 04:13:34.764 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:34.764 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:13:34.764 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 04:13:34.774 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:34.784 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-18 04:13:34.984 -07 000000626 INF: FPGA: Recv YMVTILE 17-03-18 04:13:34.984 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 390 ms overall 17-03-18 04:13:35.014 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:35.014 -07 000000455 INF: FPGA: Recv YRDPOS 153253 17-03-18 04:13:35.024 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:35.024 -07 000000438 INF: Y Motor: Encoder = 153253 = motor step 119728.9 = 74.8306 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:35.024 -07 000000438 INF: Y Motor: Position error before settling (table move) = -45 encoder counts (-0.022 mm) 17-03-18 04:13:35.024 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.846 mm, average velocity = 2.169 mm/sec 17-03-18 04:13:35.974 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:35.974 -07 000000618 INF: FPGA: Recv YRDPOS 153253 17-03-18 04:13:35.984 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:35.984 -07 000000438 INF: Y Motor: Encoder = 153253 = motor step 119728.9 = 74.8306 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:35.994 -07 000000438 INF: Y Motor: After move to 74.852608, error = -0.022041, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:35.994 -07 000000438 INF: Y Motor: Position error after settling (table move) = -45 encoder counts (-0.022 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:35.994 -07 000000438 INF: Y Motor: Moved to 74.8306 after 1424 ms (table move) 17-03-18 04:13:36.004 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.165566 mm (DAC = 36168) 17-03-18 04:13:36.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.004 -07 000000625 INF: FPGA: Recv ZSGSRD 35063 17-03-18 04:13:36.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:36.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.014 -07 000000585 INF: FPGA: Recv ZSGSRD 35061 17-03-18 04:13:36.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:36.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.024 -07 000000480 INF: FPGA: Recv ZSGSRD 35067 17-03-18 04:13:36.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.034 -07 000000487 INF: FPGA: Recv ZSGSRD 35074 17-03-18 04:13:36.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.044 -07 000000455 INF: FPGA: Recv ZSGSRD 35064 17-03-18 04:13:36.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.054 -07 000000585 INF: FPGA: Recv ZSGSRD 35070 17-03-18 04:13:36.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.064 -07 000000501 INF: FPGA: Recv ZSGSRD 35058 17-03-18 04:13:36.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.074 -07 000000585 INF: FPGA: Recv ZSGSRD 35059 17-03-18 04:13:36.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.084 -07 000000480 INF: FPGA: Recv ZSGSRD 35063 17-03-18 04:13:36.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.094 -07 000000626 INF: FPGA: Recv ZSGSRD 35062 17-03-18 04:13:36.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.104 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:36.104 -07 000000487 INF: FPGA: Recv ZPIEZORD 30719 17-03-18 04:13:36.114 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.114 -07 000000610 INF: Z Motor: Piezo is near 45.6 V (nominally 0 to 100 V), expect near 55.2 V, since DAC is at 5.519 V. Piezo Error = -9.6 V. 17-03-18 04:13:36.114 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.6 um, Read 10 ADC samples: Avg = 35064 (-164.7 uncal um), Error = 0.8 uncal um, Median = 35063 (-164.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35058 (-164.7 uncal um), Max = 35074 (-164.8 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:13:36.114 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35064, posNoise = 10, negNoise = 6 17-03-18 04:13:36.114 -07 000000610 INF: Z Motor: After move to -0.165566, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:36.114 -07 000000610 INF: Z Motor: Settle wait time = 1427 ms, measure time = 110 ms (allowed 150 ms), total time = 1537 ms 17-03-18 04:13:36.114 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:36.154 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1579 ms 17-03-18 04:13:36.154 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:36.154 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83056640625, Z-position -0.165581926549841. ---------- 17-03-18 04:13:36.154 -07 000000610 INF: Cycle 122 Tile 19 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:36.154 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 35991, sync = True, waitForSettling = True) 17-03-18 04:13:36.154 -07 000000610 INF: Z Motor: Moving to -0.164756 mm, started at -0.165582 mm, distance = 0.83 um 17-03-18 04:13:36.154 -07 000000610 INF: FPGA: Xmit ZDACW 35991\n [Z Motor] 17-03-18 04:13:36.154 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 04:13:36.164 -07 000000610 INF: FPGA: 'ZDACW 35991' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:13:36.164 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:36.164 -07 000000611 INF: FPGA: Recv ZDACR 35991 17-03-18 04:13:36.174 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.174 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:36.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.324 -07 000000625 INF: FPGA: Recv ZSGSRD 34935 17-03-18 04:13:36.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.334 -07 000000437 INF: FPGA: Recv ZSGSRD 34937 17-03-18 04:13:36.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.344 -07 000000512 INF: FPGA: Recv ZSGSRD 34941 17-03-18 04:13:36.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.354 -07 000000474 INF: FPGA: Recv ZSGSRD 34939 17-03-18 04:13:36.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.364 -07 000000585 INF: FPGA: Recv ZSGSRD 34937 17-03-18 04:13:36.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:36.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.374 -07 000000480 INF: FPGA: Recv ZSGSRD 34934 17-03-18 04:13:36.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.384 -07 000000618 INF: FPGA: Recv ZSGSRD 34938 17-03-18 04:13:36.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.394 -07 000000012 INF: FPGA: Recv ZSGSRD 34931 17-03-18 04:13:36.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.404 -07 000000618 INF: FPGA: Recv ZSGSRD 34935 17-03-18 04:13:36.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:36.414 -07 000000480 INF: FPGA: Recv ZSGSRD 34938 17-03-18 04:13:36.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.424 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:36.424 -07 000000501 INF: FPGA: Recv ZPIEZORD 30554 17-03-18 04:13:36.434 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:36.434 -07 000000610 INF: Z Motor: Piezo is near 45.3 V (nominally 0 to 100 V), expect near 54.9 V, since DAC is at 5.492 V. Piezo Error = -9.6 V. 17-03-18 04:13:36.434 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -164.8 um, Read 10 ADC samples: Avg = 34936 (-163.9 uncal um), Error = 0.9 uncal um, Median = 34937 (-163.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 34931 (-163.9 uncal um), Max = 34941 (-163.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:13:36.434 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34936, posNoise = 5, negNoise = 5 17-03-18 04:13:36.434 -07 000000610 INF: Z Motor: After move to -0.164756, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:36.434 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:13:36.434 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:36.434 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:36.434 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:36.434 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:36.434 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:36.434 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:36.434 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:36.434 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:36.434 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:36.434 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:36.434 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:36.434 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:36.444 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-18 04:13:36.444 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:36.444 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 04:13:36.444 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:36.454 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 04:13:36.454 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 04:13:36.454 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 04:13:36.454 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 04:13:36.464 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 36168 150\n [Camera] 17-03-18 04:13:36.644 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:36.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:36.664 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:37.074 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:37.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:37.074 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:37.084 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.004458, 17-03-18 04:13:37.084 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:37.084 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:37.084 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:37.084 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-18 04:13:37.084 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:37.084 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:37.084 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:13:37.274 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36168 802 17-03-18 04:13:37.414 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:37.454 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 04:13:37.454 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 04:13:37.454 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:37.454 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 371 ms. 17-03-18 04:13:37.454 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 04:13:37.454 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:37.454 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:37.464 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 04:13:37.464 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:37.474 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms. 17-03-18 04:13:37.624 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:37.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:37.624 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:37.624 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:37.624 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:37.624 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:37.624 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:37.624 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:13:37.634 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:37.634 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 04:13:37.814 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:13:37.814 -07 000000480 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:37.814 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 36168 150' command took 2 ms to send, 1342 ms to get response, and 1351 ms overall 17-03-18 04:13:38.004 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 04:13:38.004 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 04:13:38.004 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:38.004 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:38.014 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 381 ms. 17-03-18 04:13:38.014 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 04:13:38.014 -07 000000438 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:38.014 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:38.014 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 04:13:38.014 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start. 17-03-18 04:13:38.014 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 04:13:38.054 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 41 ms. 17-03-18 04:13:38.054 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start. 17-03-18 04:13:38.094 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms. 17-03-18 04:13:38.094 -07 000000610 INF: Move compensator for Bottom-surface imaging. 17-03-18 04:13:38.094 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator] 17-03-18 04:13:38.104 -07 000000487 INF: FPGA: Recv EMCUR 17-03-18 04:13:38.104 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-18 04:13:38.104 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator] 17-03-18 04:13:38.604 -07 000000447 INF: FPGA: Recv EMIN 17-03-18 04:13:38.604 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 494 ms to get response, and 502 ms overall 17-03-18 04:13:38.604 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator] 17-03-18 04:13:38.604 -07 000000501 INF: FPGA: Recv EMCUR 17-03-18 04:13:38.614 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:13:38.614 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 04:13:38.614 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83056640625, Z-Position -0.164759627395696. ------ 17-03-18 04:13:38.614 -07 000000012 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:13:38.614 -07 000000585 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13927 mm 17-03-18 04:13:38.614 -07 000000585 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:38.614 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True) 17-03-18 04:13:38.614 -07 000000626 INF: Y Motor: Moving to 59.9126 mm, started at 74.8306 mm, delta = -14.9180 mm 17-03-18 04:13:38.614 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 30424, sync = True, waitForSettling = False) 17-03-18 04:13:38.614 -07 000000447 INF: Z Motor: Moving to -0.139272 mm, started at -0.164760 mm, distance = 25.49 um 17-03-18 04:13:38.624 -07 000000579 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:13:38.624 -07 000000012 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:13:38.624 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:38.624 -07 000000438 INF: FPGA: Recv YRDPOS 153254 17-03-18 04:13:38.634 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:38.634 -07 000000626 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:38.634 -07 000000447 INF: FPGA: Xmit ZDACW 30424\n [Z Motor] 17-03-18 04:13:38.634 -07 000000479 INF: FPGA: Recv ZDACW 17-03-18 04:13:38.634 -07 000000626 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False 17-03-18 04:13:38.634 -07 000000626 INF: Y Motor: Moving to 122701 encoder counts 17-03-18 04:13:38.644 -07 000000447 INF: FPGA: 'ZDACW 30424' command took 1 ms to send, 0 ms to get response, and 20 ms overall 17-03-18 04:13:38.644 -07 000000012 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 04:13:38.654 -07 000000626 INF: FPGA: Xmit YMVTO 122701\n [Y Motor] 17-03-18 04:13:38.664 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:38.664 -07 000000579 INF: FPGA: Recv ZDACR 30424 17-03-18 04:13:38.674 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 30 ms overall 17-03-18 04:13:38.674 -07 000000447 INF: Z Motor: MoveAbsStepped took 50 ms (did NOT wait for settling yet)) 17-03-18 04:13:38.844 -07 000000512 INF: FPGA: Recv FOCMRRFOC 17-03-18 04:13:38.844 -07 000000012 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall 17-03-18 04:13:40.274 -07 000000625 INF: FPGA: Recv YMVTO 122703 23903 17-03-18 04:13:40.274 -07 000000626 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1618 ms to get response, and 1643 ms overall 17-03-18 04:13:40.274 -07 000000626 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm) 17-03-18 04:13:40.274 -07 000000626 INF: Y Motor: To move from 74.831 to 59.913 (-14.918 mm) should take 23870 steps, but required 23903 steps (14.939 mm). Slippage = 0.021 mm (0.00%). 17-03-18 04:13:40.274 -07 000000626 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1644 ms, distance = 14.918 mm, average velocity = 9.074 mm/sec 17-03-18 04:13:41.654 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:41.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:42.444 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.03576, 17-03-18 04:13:43.124 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:43.124 -07 000000618 INF: FPGA: Recv YRDPOS 122697 17-03-18 04:13:43.134 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:43.134 -07 000000626 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:43.174 -07 000000626 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:43.174 -07 000000626 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm) 17-03-18 04:13:43.174 -07 000000626 INF: Y Motor: Moved to 59.9106 after 4551 ms 17-03-18 04:13:43.174 -07 000000585 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139272 mm (DAC = 30424) 17-03-18 04:13:43.174 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:43.174 -07 000000438 INF: FPGA: Recv ZSGSRD 30971 17-03-18 04:13:43.184 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:43.184 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:43.184 -07 000000561 INF: FPGA: Recv ZSGSRD 30971 17-03-18 04:13:43.194 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:43.194 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:43.194 -07 000000512 INF: FPGA: Recv ZSGSRD 30966 17-03-18 04:13:43.204 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:43.204 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:43.204 -07 000000487 INF: FPGA: Recv ZSGSRD 30970 17-03-18 04:13:43.214 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:43.214 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:43.214 -07 000000474 INF: FPGA: Recv ZSGSRD 30966 17-03-18 04:13:43.224 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:43.224 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:43.224 -07 000000447 INF: FPGA: Recv ZSGSRD 30972 17-03-18 04:13:43.234 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:43.234 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:43.234 -07 000000608 INF: FPGA: Recv ZSGSRD 30970 17-03-18 04:13:43.244 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:43.244 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:43.244 -07 000000512 INF: FPGA: Recv ZSGSRD 30966 17-03-18 04:13:43.254 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:43.254 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:43.254 -07 000000487 INF: FPGA: Recv ZSGSRD 30972 17-03-18 04:13:43.264 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:43.264 -07 000000585 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:43.264 -07 000000479 INF: FPGA: Recv ZSGSRD 30974 17-03-18 04:13:43.274 -07 000000585 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:43.274 -07 000000585 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:43.274 -07 000000012 INF: FPGA: Recv ZPIEZORD 26377 17-03-18 04:13:43.284 -07 000000585 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:43.284 -07 000000585 INF: Z Motor: Piezo is near 36.3 V (nominally 0 to 100 V), expect near 46.4 V, since DAC is at 4.642 V. Piezo Error = -10.1 V. 17-03-18 04:13:43.284 -07 000000585 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.3 um, Read 10 ADC samples: Avg = 30970 (-138.5 uncal um), Error = 0.8 uncal um, Median = 30970 (-138.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 30966 (-138.5 uncal um), Max = 30974 (-138.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 04:13:43.284 -07 000000585 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30970, posNoise = 4, negNoise = 4 17-03-18 04:13:43.284 -07 000000585 INF: Z Motor: After move to -0.139272, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:43.284 -07 000000585 INF: Z Motor: Settle wait time = 4553 ms, measure time = 107 ms (allowed 150 ms), total time = 4660 ms 17-03-18 04:13:43.284 -07 000000585 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:43.334 -07 000000585 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4713 ms 17-03-18 04:13:43.334 -07 000000585 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:43.334 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:43.334 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:43.334 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:43.334 -07 000000437 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 04:13:43.334 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:43.334 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:43.334 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 04:13:43.334 -07 000000437 INF: Camera: sBCa_SetPowerMode(785074288, 1) start. 17-03-18 04:13:43.364 -07 000000437 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms. 17-03-18 04:13:43.364 -07 000000437 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 04:13:43.364 -07 000000437 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms. 17-03-18 04:13:43.364 -07 000000437 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 04:13:43.384 -07 000000437 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms. 17-03-18 04:13:43.384 -07 000000437 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 44 ms. 17-03-18 04:13:43.384 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 04:13:43.424 -07 000000512 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 04:13:43.724 -07 000000585 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 04:13:43.724 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 04:13:43.724 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 04:13:43.844 -07 000000474 INF: FPGA: Recv @CAMSNAP 380 17-03-18 04:13:43.844 -07 000000474 INF: FPGA: Recv CAMSNAP 17-03-18 04:13:43.844 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2281705520, 0x0, 559484976) start. 17-03-18 04:13:43.844 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 452 ms to get response, and 459 ms overall 17-03-18 04:13:43.954 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2281705520, 0x0, 559484976) end. Duration was 114 ms. 17-03-18 04:13:43.954 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:43.954 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 04:13:43.954 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 229 ms. 17-03-18 04:13:44.044 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:13:44.044 -07 000000438 INF: Image SNR check: start 17-03-18 04:13:44.044 -07 000000455 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:13:44.054 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:44.054 -07 000000626 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 04:13:44.054 -07 000000438 INF: Image SNR check: pass [peak (Max-Min)=132.58] 17-03-18 04:13:44.054 -07 000000438 INF: Autofocus start 17-03-18 04:13:44.054 -07 000000438 INF: MeasureProfile start 17-03-18 04:13:44.064 -07 000000438 INF: MeasureProfile done 17-03-18 04:13:44.064 -07 000000438 INF: X=0 Z correction [um]=-0.02394831 17-03-18 04:13:44.064 -07 000000438 INF: Autofocus finished 17-03-18 04:13:44.254 -07 000000608 INF: FPGA: Recv FOCMRRIMG 17-03-18 04:13:44.254 -07 000000626 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 04:13:44.254 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.139281202041472. ---------- 17-03-18 04:13:44.254 -07 000000610 INF: Cycle 122 Tile 1 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:44.264 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28932, sync = True, waitForSettling = True) 17-03-18 04:13:44.264 -07 000000610 INF: Z Motor: Moving to -0.132442 mm, started at -0.139281 mm, distance = 6.84 um 17-03-18 04:13:44.264 -07 000000610 INF: FPGA: Xmit ZDACW 28932\n [Z Motor] 17-03-18 04:13:44.264 -07 000000625 INF: FPGA: Recv ZDACW 17-03-18 04:13:44.274 -07 000000610 INF: FPGA: 'ZDACW 28932' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:44.274 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:44.274 -07 000000608 INF: FPGA: Recv ZDACR 28932 17-03-18 04:13:44.284 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:44.284 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:44.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:44.434 -07 000000611 INF: FPGA: Recv ZSGSRD 29905 17-03-18 04:13:44.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:44.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:44.444 -07 000000437 INF: FPGA: Recv ZSGSRD 29910 17-03-18 04:13:44.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:44.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:44.454 -07 000000455 INF: FPGA: Recv ZSGSRD 29909 17-03-18 04:13:44.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:44.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:44.464 -07 000000625 INF: FPGA: Recv ZSGSRD 29903 17-03-18 04:13:44.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:44.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:44.474 -07 000000608 INF: FPGA: Recv ZSGSRD 29905 17-03-18 04:13:44.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:44.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:44.484 -07 000000590 INF: FPGA: Recv ZSGSRD 29901 17-03-18 04:13:44.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:13:44.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:44.494 -07 000000625 INF: FPGA: Recv ZSGSRD 29902 17-03-18 04:13:44.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:44.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:44.504 -07 000000561 INF: FPGA: Recv ZSGSRD 29908 17-03-18 04:13:44.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:44.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:44.514 -07 000000618 INF: FPGA: Recv ZSGSRD 29906 17-03-18 04:13:44.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:44.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:44.524 -07 000000012 INF: FPGA: Recv ZSGSRD 29904 17-03-18 04:13:44.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:44.534 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:44.534 -07 000000480 INF: FPGA: Recv ZPIEZORD 25232 17-03-18 04:13:44.544 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:44.544 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.415 V. Piezo Error = -10.2 V. 17-03-18 04:13:44.544 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29905 (-131.7 uncal um), Error = 0.8 uncal um, Median = 29905 (-131.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29901 (-131.6 uncal um), Max = 29910 (-131.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 04:13:44.544 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29905, posNoise = 5, negNoise = 4 17-03-18 04:13:44.544 -07 000000610 INF: Z Motor: After move to -0.132442, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:44.544 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-18 04:13:44.544 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:44.544 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:44.544 -07 000000479 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:44.544 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:44.544 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:44.544 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:44.544 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:44.544 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:44.544 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:44.544 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:44.544 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:44.544 -07 000000444 INF: Camera: sBCa_SetPowerMode(785074704, 1) start. 17-03-18 04:13:44.544 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:44.554 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:44.554 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 04:13:44.554 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 04:13:44.564 -07 000000444 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms. 17-03-18 04:13:44.564 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:44.574 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:13:44.574 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:44.584 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 04:13:44.584 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 34 ms. 17-03-18 04:13:44.584 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 29108 150\n [Camera] 17-03-18 04:13:44.784 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 196 17-03-18 04:13:45.194 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:45.194 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:45.204 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:45.204 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:45.204 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:45.204 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:45.204 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:45.204 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 04:13:45.204 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:45.204 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 04:13:45.394 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29108 802 17-03-18 04:13:45.544 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:45.574 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 373 ms. 17-03-18 04:13:45.574 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms. 17-03-18 04:13:45.574 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:45.584 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 04:13:45.584 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 04:13:45.584 -07 000000479 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:45.584 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:45.584 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 04:13:45.584 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:45.594 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 04:13:45.744 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:45.744 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:45.744 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:45.744 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:45.744 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:45.744 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:45.744 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:45.744 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) start. 17-03-18 04:13:45.744 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:45.744 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start. 17-03-18 04:13:45.934 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:13:45.934 -07 000000455 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:45.934 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 29108 150' command took 2 ms to send, 1344 ms to get response, and 1352 ms overall 17-03-18 04:13:45.934 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.132844 17-03-18 04:13:45.934 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13284 mm 17-03-18 04:13:45.934 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:45.944 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True) 17-03-18 04:13:45.944 -07 000000608 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm 17-03-18 04:13:45.944 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 29020, sync = True, waitForSettling = False) 17-03-18 04:13:45.944 -07 000000437 INF: Z Motor: Moving to -0.132845 mm, started at -0.132439 mm, distance = -0.41 um 17-03-18 04:13:45.944 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:45.944 -07 000000474 INF: FPGA: Recv YRDPOS 122697 17-03-18 04:13:45.954 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:45.954 -07 000000608 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:45.954 -07 000000608 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:45.954 -07 000000608 INF: Y Motor: Moving 1331 steps2 17-03-18 04:13:45.954 -07 000000437 INF: FPGA: Xmit ZDACW 29020\n [Z Motor] 17-03-18 04:13:45.954 -07 000000579 INF: FPGA: Recv ZDACW 17-03-18 04:13:45.964 -07 000000437 INF: FPGA: 'ZDACW 29020' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:45.964 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:45.964 -07 000000590 INF: FPGA: Recv ZDACR 29020 17-03-18 04:13:45.974 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:45.974 -07 000000437 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet)) 17-03-18 04:13:45.974 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:46.144 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 395 ms. 17-03-18 04:13:46.144 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-18 04:13:46.144 -07 000000611 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:46.144 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) end. Duration was 398 ms. 17-03-18 04:13:46.144 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms. 17-03-18 04:13:46.144 -07 000000479 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:46.154 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:46.154 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms. 17-03-18 04:13:46.154 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:46.154 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms. 17-03-18 04:13:46.354 -07 000000455 INF: FPGA: Recv YMVTILE 17-03-18 04:13:46.354 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 400 ms overall 17-03-18 04:13:46.394 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:46.394 -07 000000444 INF: FPGA: Recv YRDPOS 124380 17-03-18 04:13:46.404 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:46.404 -07 000000608 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:46.404 -07 000000608 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm) 17-03-18 04:13:46.404 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.832 mm, average velocity = 2.080 mm/sec 17-03-18 04:13:46.654 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:46.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:47.354 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:47.354 -07 000000474 INF: FPGA: Recv YRDPOS 124380 17-03-18 04:13:47.364 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:47.364 -07 000000608 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:47.394 -07 000000608 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:47.394 -07 000000608 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:47.394 -07 000000608 INF: Y Motor: Moved to 60.7324 after 1453 ms (table move) 17-03-18 04:13:47.394 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132845 mm (DAC = 29020) 17-03-18 04:13:47.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.394 -07 000000437 INF: FPGA: Recv ZSGSRD 29971 17-03-18 04:13:47.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:47.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.404 -07 000000474 INF: FPGA: Recv ZSGSRD 29975 17-03-18 04:13:47.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.414 -07 000000444 INF: FPGA: Recv ZSGSRD 29973 17-03-18 04:13:47.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.424 -07 000000480 INF: FPGA: Recv ZSGSRD 29968 17-03-18 04:13:47.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.434 -07 000000585 INF: FPGA: Recv ZSGSRD 29960 17-03-18 04:13:47.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.444 -07 000000012 INF: FPGA: Recv ZSGSRD 29969 17-03-18 04:13:47.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.454 -07 000000474 INF: FPGA: Recv ZSGSRD 29964 17-03-18 04:13:47.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.464 -07 000000444 INF: FPGA: Recv ZSGSRD 29971 17-03-18 04:13:47.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.474 -07 000000487 INF: FPGA: Recv ZSGSRD 29970 17-03-18 04:13:47.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.494 -07 000000512 INF: FPGA: Recv ZSGSRD 29974 17-03-18 04:13:47.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:47.504 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:47.504 -07 000000625 INF: FPGA: Recv ZPIEZORD 25423 17-03-18 04:13:47.514 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.514 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.428 V. Piezo Error = -10.0 V. 17-03-18 04:13:47.514 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.8 um, Read 10 ADC samples: Avg = 29970 (-132.1 uncal um), Error = 0.8 uncal um, Median = 29970 (-132.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29960 (-132.0 uncal um), Max = 29975 (-132.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-18 04:13:47.514 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29970, posNoise = 5, negNoise = 10 17-03-18 04:13:47.514 -07 000000610 INF: Z Motor: After move to -0.132845, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:47.514 -07 000000610 INF: Z Motor: Settle wait time = 1455 ms, measure time = 114 ms (allowed 150 ms), total time = 1569 ms 17-03-18 04:13:47.514 -07 000000610 INF: Z Motor: Waiting extra 36 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:47.554 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms 17-03-18 04:13:47.554 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:47.554 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.132856989899711. ---------- 17-03-18 04:13:47.554 -07 000000610 INF: Cycle 122 Tile 2 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:47.554 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28843, sync = True, waitForSettling = True) 17-03-18 04:13:47.554 -07 000000610 INF: Z Motor: Moving to -0.132035 mm, started at -0.132857 mm, distance = 0.82 um 17-03-18 04:13:47.554 -07 000000610 INF: FPGA: Xmit ZDACW 28843\n [Z Motor] 17-03-18 04:13:47.554 -07 000000608 INF: FPGA: Recv ZDACW 17-03-18 04:13:47.564 -07 000000610 INF: FPGA: 'ZDACW 28843' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:47.564 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:47.564 -07 000000626 INF: FPGA: Recv ZDACR 28843 17-03-18 04:13:47.574 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.574 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:47.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.724 -07 000000590 INF: FPGA: Recv ZSGSRD 29842 17-03-18 04:13:47.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:47.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.734 -07 000000474 INF: FPGA: Recv ZSGSRD 29845 17-03-18 04:13:47.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.744 -07 000000611 INF: FPGA: Recv ZSGSRD 29842 17-03-18 04:13:47.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.754 -07 000000012 INF: FPGA: Recv ZSGSRD 29837 17-03-18 04:13:47.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.764 -07 000000585 INF: FPGA: Recv ZSGSRD 29842 17-03-18 04:13:47.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.774 -07 000000608 INF: FPGA: Recv ZSGSRD 29847 17-03-18 04:13:47.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.784 -07 000000501 INF: FPGA: Recv ZSGSRD 29842 17-03-18 04:13:47.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.804 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.008536, 17-03-18 04:13:47.804 -07 000000447 INF: FPGA: Recv ZSGSRD 29844 17-03-18 04:13:47.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:47.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.834 -07 000000512 INF: FPGA: Recv ZSGSRD 29830 17-03-18 04:13:47.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 04:13:47.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:47.844 -07 000000474 INF: FPGA: Recv ZSGSRD 29846 17-03-18 04:13:47.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:47.864 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:47.864 -07 000000438 INF: FPGA: Recv ZPIEZORD 25268 17-03-18 04:13:47.874 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:47.874 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.401 V. Piezo Error = -10.0 V. 17-03-18 04:13:47.874 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.0 um, Read 10 ADC samples: Avg = 29842 (-131.3 uncal um), Error = 0.8 uncal um, Median = 29842 (-131.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29830 (-131.2 uncal um), Max = 29847 (-131.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 12 (0.1 uncal um) 17-03-18 04:13:47.874 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29842, posNoise = 5, negNoise = 12 17-03-18 04:13:47.874 -07 000000610 INF: Z Motor: After move to -0.132035, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:47.874 -07 000000610 INF: Z Motor: MoveAbsStepped took 314 ms) 17-03-18 04:13:47.874 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:47.874 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:47.874 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:47.874 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:47.874 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:47.874 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:47.874 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:47.874 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:47.874 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:47.874 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:47.874 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:47.874 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:47.884 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 04:13:47.884 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:47.884 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:13:47.884 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:47.904 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 19 ms. 17-03-18 04:13:47.904 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 24 ms. 17-03-18 04:13:47.904 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 19 ms. 17-03-18 04:13:47.904 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 24 ms. 17-03-18 04:13:47.904 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 29020 150\n [Camera] 17-03-18 04:13:48.104 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:48.524 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:48.524 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:48.524 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:48.524 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:48.524 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) start. 17-03-18 04:13:48.524 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:48.524 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:48.524 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:48.524 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:48.524 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) start. 17-03-18 04:13:48.714 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29020 802 17-03-18 04:13:48.864 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:48.924 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) end. Duration was 402 ms. 17-03-18 04:13:48.924 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms. 17-03-18 04:13:48.924 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:48.924 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) end. Duration was 401 ms. 17-03-18 04:13:48.924 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-18 04:13:48.924 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:48.934 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:48.934 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms. 17-03-18 04:13:48.934 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:48.944 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms. 17-03-18 04:13:49.064 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:49.064 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:49.064 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:49.064 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:49.064 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 04:13:49.064 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:49.064 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:49.064 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:49.194 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:49.194 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:13:49.254 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:13:49.254 -07 000000437 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:49.254 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 29020 150' command took 2 ms to send, 1345 ms to get response, and 1352 ms overall 17-03-18 04:13:49.254 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.132782 17-03-18 04:13:49.254 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13278 mm 17-03-18 04:13:49.254 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:49.264 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True) 17-03-18 04:13:49.264 -07 000000501 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm 17-03-18 04:13:49.264 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:49.264 -07 000000625 INF: Z Motor: Entering MoveAbsStepped (DAC = 29006, sync = True, waitForSettling = False) 17-03-18 04:13:49.264 -07 000000625 INF: Z Motor: Moving to -0.132781 mm, started at -0.132035 mm, distance = -0.75 um 17-03-18 04:13:49.264 -07 000000579 INF: FPGA: Recv YRDPOS 124380 17-03-18 04:13:49.274 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:49.274 -07 000000501 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:49.274 -07 000000501 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:49.274 -07 000000501 INF: Y Motor: Moving 1344 steps-21 17-03-18 04:13:49.274 -07 000000625 INF: FPGA: Xmit ZDACW 29006\n [Z Motor] 17-03-18 04:13:49.274 -07 000000438 INF: FPGA: Recv ZDACW 17-03-18 04:13:49.284 -07 000000625 INF: FPGA: 'ZDACW 29006' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:49.284 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:49.294 -07 000000625 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:49.294 -07 000000590 INF: FPGA: Recv ZDACR 29006 17-03-18 04:13:49.304 -07 000000625 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:49.304 -07 000000625 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet)) 17-03-18 04:13:49.464 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 395 ms. 17-03-18 04:13:49.464 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-18 04:13:49.464 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:49.464 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms. 17-03-18 04:13:49.464 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms. 17-03-18 04:13:49.574 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 383 ms. 17-03-18 04:13:49.574 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms. 17-03-18 04:13:49.574 -07 000000608 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:49.574 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms. 17-03-18 04:13:49.584 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 517 ms. 17-03-18 04:13:49.654 -07 000000626 INF: FPGA: Recv YMVTILE 17-03-18 04:13:49.654 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 389 ms overall 17-03-18 04:13:49.704 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:49.704 -07 000000618 INF: FPGA: Recv YRDPOS 126081 17-03-18 04:13:49.714 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:49.714 -07 000000501 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:49.714 -07 000000501 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm) 17-03-18 04:13:49.714 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.840 mm, average velocity = 2.160 mm/sec 17-03-18 04:13:50.664 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:50.664 -07 000000437 INF: FPGA: Recv YRDPOS 126082 17-03-18 04:13:50.674 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.674 -07 000000501 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:50.694 -07 000000501 INF: Y Motor: After move to 61.572609, error = -0.009132, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:50.694 -07 000000501 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 04:13:50.694 -07 000000501 INF: Y Motor: Moved to 61.5635 after 1439 ms (table move) 17-03-18 04:13:50.704 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132781 mm (DAC = 29006) 17-03-18 04:13:50.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:50.704 -07 000000455 INF: FPGA: Recv ZSGSRD 29954 17-03-18 04:13:50.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:50.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:50.714 -07 000000626 INF: FPGA: Recv ZSGSRD 29960 17-03-18 04:13:50.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:50.724 -07 000000608 INF: FPGA: Recv ZSGSRD 29966 17-03-18 04:13:50.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:50.734 -07 000000625 INF: FPGA: Recv ZSGSRD 29952 17-03-18 04:13:50.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:50.744 -07 000000444 INF: FPGA: Recv ZSGSRD 29951 17-03-18 04:13:50.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:50.754 -07 000000625 INF: FPGA: Recv ZSGSRD 29952 17-03-18 04:13:50.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:50.764 -07 000000626 INF: FPGA: Recv ZSGSRD 29955 17-03-18 04:13:50.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:50.774 -07 000000501 INF: FPGA: Recv ZSGSRD 29968 17-03-18 04:13:50.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:50.784 -07 000000608 INF: FPGA: Recv ZSGSRD 29951 17-03-18 04:13:50.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:50.794 -07 000000447 INF: FPGA: Recv ZSGSRD 29967 17-03-18 04:13:50.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.804 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:50.804 -07 000000501 INF: FPGA: Recv ZPIEZORD 25455 17-03-18 04:13:50.814 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.814 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.426 V. Piezo Error = -9.9 V. 17-03-18 04:13:50.814 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.8 um, Read 10 ADC samples: Avg = 29958 (-132.0 uncal um), Error = 0.8 uncal um, Median = 29954 (-132.0 uncal um), StdDev = 7 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29951 (-131.9 uncal um), Max = 29968 (-132.1 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:13:50.814 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29958, posNoise = 10, negNoise = 7 17-03-18 04:13:50.814 -07 000000610 INF: Z Motor: After move to -0.132781, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:50.814 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 107 ms (allowed 150 ms), total time = 1550 ms 17-03-18 04:13:50.814 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:50.864 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms 17-03-18 04:13:50.864 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:50.864 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.5634765625, Z-position -0.13277989935401. ---------- 17-03-18 04:13:50.864 -07 000000610 INF: Cycle 122 Tile 3 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:50.864 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28829, sync = True, waitForSettling = True) 17-03-18 04:13:50.864 -07 000000610 INF: Z Motor: Moving to -0.131971 mm, started at -0.132780 mm, distance = 0.81 um 17-03-18 04:13:50.864 -07 000000610 INF: FPGA: Xmit ZDACW 28829\n [Z Motor] 17-03-18 04:13:50.864 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 04:13:50.874 -07 000000610 INF: FPGA: 'ZDACW 28829' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:13:50.874 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:50.874 -07 000000437 INF: FPGA: Recv ZDACR 28829 17-03-18 04:13:50.884 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:50.884 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:51.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:51.034 -07 000000625 INF: FPGA: Recv ZSGSRD 29836 17-03-18 04:13:51.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:51.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:51.044 -07 000000618 INF: FPGA: Recv ZSGSRD 29836 17-03-18 04:13:51.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:51.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:51.054 -07 000000487 INF: FPGA: Recv ZSGSRD 29833 17-03-18 04:13:51.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:51.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:51.064 -07 000000438 INF: FPGA: Recv ZSGSRD 29823 17-03-18 04:13:51.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:51.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:51.074 -07 000000611 INF: FPGA: Recv ZSGSRD 29829 17-03-18 04:13:51.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:51.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:51.084 -07 000000618 INF: FPGA: Recv ZSGSRD 29829 17-03-18 04:13:51.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:51.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:51.094 -07 000000579 INF: FPGA: Recv ZSGSRD 29835 17-03-18 04:13:51.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:51.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:51.104 -07 000000487 INF: FPGA: Recv ZSGSRD 29835 17-03-18 04:13:51.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:51.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:51.114 -07 000000444 INF: FPGA: Recv ZSGSRD 29831 17-03-18 04:13:51.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:51.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:51.124 -07 000000512 INF: FPGA: Recv ZSGSRD 29832 17-03-18 04:13:51.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:51.134 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:51.134 -07 000000625 INF: FPGA: Recv ZPIEZORD 25278 17-03-18 04:13:51.144 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:51.144 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.399 V. Piezo Error = -10.0 V. 17-03-18 04:13:51.144 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.0 um, Read 10 ADC samples: Avg = 29832 (-131.2 uncal um), Error = 0.8 uncal um, Median = 29832 (-131.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29823 (-131.1 uncal um), Max = 29836 (-131.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 04:13:51.144 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29832, posNoise = 4, negNoise = 9 17-03-18 04:13:51.144 -07 000000610 INF: Z Motor: After move to -0.131971, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:51.144 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:13:51.144 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:51.144 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:51.144 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:51.144 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:51.144 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:51.144 -07 000000585 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:51.144 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:51.144 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:51.144 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:51.144 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:51.144 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:51.144 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:51.154 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:51.154 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:51.154 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:13:51.154 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:51.164 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 04:13:51.164 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:13:51.164 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 04:13:51.164 -07 000000585 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:13:51.164 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 29006 150\n [Camera] 17-03-18 04:13:51.364 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:51.644 -07 000000474 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:51.644 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:51.784 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 611 17-03-18 04:13:51.784 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 611 17-03-18 04:13:51.784 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:51.794 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 611 17-03-18 04:13:51.794 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 611 17-03-18 04:13:51.794 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:51.794 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:51.794 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) start. 17-03-18 04:13:51.794 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:51.794 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:13:51.974 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29006 802 17-03-18 04:13:52.124 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:52.164 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) end. Duration was 373 ms. 17-03-18 04:13:52.164 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-18 04:13:52.164 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:52.164 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 04:13:52.164 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 04:13:52.164 -07 000000438 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:52.174 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:52.174 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:13:52.174 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 04:13:52.174 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms. 17-03-18 04:13:52.324 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:52.324 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:52.324 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:52.324 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:52.324 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) start. 17-03-18 04:13:52.334 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:52.334 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:52.334 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:52.334 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:52.334 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) start. 17-03-18 04:13:52.514 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:13:52.524 -07 000000438 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:52.524 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 29006 150' command took 2 ms to send, 1340 ms to get response, and 1351 ms overall 17-03-18 04:13:52.524 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.132323 17-03-18 04:13:52.524 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13232 mm 17-03-18 04:13:52.524 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:52.524 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True) 17-03-18 04:13:52.524 -07 000000590 INF: Y Motor: Moving to 62.4026 mm, started at 61.5635 mm, delta = 0.8391 mm 17-03-18 04:13:52.524 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:52.524 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 28906, sync = True, waitForSettling = False) 17-03-18 04:13:52.524 -07 000000579 INF: Z Motor: Moving to -0.132323 mm, started at -0.131970 mm, distance = -0.35 um 17-03-18 04:13:52.524 -07 000000437 INF: FPGA: Recv YRDPOS 126082 17-03-18 04:13:52.534 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:13:52.534 -07 000000590 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:52.534 -07 000000590 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:52.534 -07 000000590 INF: Y Motor: Moving 1343 steps-20 17-03-18 04:13:52.534 -07 000000579 INF: FPGA: Xmit ZDACW 28906\n [Z Motor] 17-03-18 04:13:52.534 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 04:13:52.544 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:52.544 -07 000000579 INF: FPGA: 'ZDACW 28906' command took 0 ms to send, 0 ms to get response, and 14 ms overall 17-03-18 04:13:52.554 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:52.554 -07 000000438 INF: FPGA: Recv ZDACR 28906 17-03-18 04:13:52.564 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:52.564 -07 000000579 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet)) 17-03-18 04:13:52.714 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) end. Duration was 388 ms. 17-03-18 04:13:52.714 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-18 04:13:52.714 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:52.724 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) end. Duration was 386 ms. 17-03-18 04:13:52.724 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 04:13:52.724 -07 000000611 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:52.724 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:52.724 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-18 04:13:52.724 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:52.734 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms. 17-03-18 04:13:52.914 -07 000000480 INF: FPGA: Recv YMVTILE 17-03-18 04:13:52.914 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 04:13:52.964 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:52.974 -07 000000611 INF: FPGA: Recv YRDPOS 127785 17-03-18 04:13:52.974 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 04:13:52.974 -07 000000590 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:52.974 -07 000000590 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm) 17-03-18 04:13:52.974 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.839 mm, average velocity = 2.163 mm/sec 17-03-18 04:13:53.204 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.999021, 17-03-18 04:13:53.924 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:53.924 -07 000000501 INF: FPGA: Recv YRDPOS 127785 17-03-18 04:13:53.934 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:53.934 -07 000000590 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:53.964 -07 000000590 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:53.964 -07 000000590 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:13:53.964 -07 000000590 INF: Y Motor: Moved to 62.3950 after 1435 ms (table move) 17-03-18 04:13:53.964 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132323 mm (DAC = 28906) 17-03-18 04:13:53.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:53.964 -07 000000480 INF: FPGA: Recv ZSGSRD 29884 17-03-18 04:13:53.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:53.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:53.974 -07 000000618 INF: FPGA: Recv ZSGSRD 29883 17-03-18 04:13:53.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:53.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:53.984 -07 000000438 INF: FPGA: Recv ZSGSRD 29880 17-03-18 04:13:53.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:53.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:53.994 -07 000000618 INF: FPGA: Recv ZSGSRD 29889 17-03-18 04:13:54.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.004 -07 000000438 INF: FPGA: Recv ZSGSRD 29888 17-03-18 04:13:54.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.014 -07 000000585 INF: FPGA: Recv ZSGSRD 29883 17-03-18 04:13:54.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.024 -07 000000579 INF: FPGA: Recv ZSGSRD 29880 17-03-18 04:13:54.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.034 -07 000000512 INF: FPGA: Recv ZSGSRD 29890 17-03-18 04:13:54.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.044 -07 000000012 INF: FPGA: Recv ZSGSRD 29891 17-03-18 04:13:54.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.054 -07 000000590 INF: FPGA: Recv ZSGSRD 29895 17-03-18 04:13:54.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.064 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:54.064 -07 000000585 INF: FPGA: Recv ZPIEZORD 25359 17-03-18 04:13:54.074 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.074 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.411 V. Piezo Error = -9.9 V. 17-03-18 04:13:54.074 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29886 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29886 (-131.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29880 (-131.5 uncal um), Max = 29895 (-131.6 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:13:54.074 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29886, posNoise = 9, negNoise = 6 17-03-18 04:13:54.074 -07 000000610 INF: Z Motor: After move to -0.132323, error = 0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:54.074 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 107 ms (allowed 150 ms), total time = 1545 ms 17-03-18 04:13:54.074 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:54.124 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms 17-03-18 04:13:54.124 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:54.124 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.132317356079803. ---------- 17-03-18 04:13:54.124 -07 000000610 INF: Cycle 122 Tile 4 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:54.124 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28729, sync = True, waitForSettling = True) 17-03-18 04:13:54.124 -07 000000610 INF: Z Motor: Moving to -0.131513 mm, started at -0.132317 mm, distance = 0.80 um 17-03-18 04:13:54.124 -07 000000610 INF: FPGA: Xmit ZDACW 28729\n [Z Motor] 17-03-18 04:13:54.124 -07 000000579 INF: FPGA: Recv ZDACW 17-03-18 04:13:54.134 -07 000000610 INF: FPGA: 'ZDACW 28729' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:54.134 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:54.134 -07 000000487 INF: FPGA: Recv ZDACR 28729 17-03-18 04:13:54.144 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.144 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:54.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.294 -07 000000480 INF: FPGA: Recv ZSGSRD 29764 17-03-18 04:13:54.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:54.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.304 -07 000000590 INF: FPGA: Recv ZSGSRD 29767 17-03-18 04:13:54.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.314 -07 000000480 INF: FPGA: Recv ZSGSRD 29763 17-03-18 04:13:54.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.324 -07 000000590 INF: FPGA: Recv ZSGSRD 29759 17-03-18 04:13:54.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.334 -07 000000501 INF: FPGA: Recv ZSGSRD 29756 17-03-18 04:13:54.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.344 -07 000000608 INF: FPGA: Recv ZSGSRD 29765 17-03-18 04:13:54.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.354 -07 000000626 INF: FPGA: Recv ZSGSRD 29766 17-03-18 04:13:54.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.364 -07 000000585 INF: FPGA: Recv ZSGSRD 29765 17-03-18 04:13:54.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.374 -07 000000437 INF: FPGA: Recv ZSGSRD 29767 17-03-18 04:13:54.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:54.384 -07 000000501 INF: FPGA: Recv ZSGSRD 29756 17-03-18 04:13:54.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.394 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:54.394 -07 000000590 INF: FPGA: Recv ZPIEZORD 25239 17-03-18 04:13:54.404 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:54.404 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.384 V. Piezo Error = -9.9 V. 17-03-18 04:13:54.404 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.5 um, Read 10 ADC samples: Avg = 29763 (-130.7 uncal um), Error = 0.8 uncal um, Median = 29764 (-130.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29756 (-130.7 uncal um), Max = 29767 (-130.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:13:54.404 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29763, posNoise = 4, negNoise = 7 17-03-18 04:13:54.404 -07 000000610 INF: Z Motor: After move to -0.131513, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:54.404 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 04:13:54.404 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:54.404 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:54.404 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:54.404 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:54.404 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:54.404 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:54.404 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:54.404 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:54.404 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 04:13:54.404 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:54.404 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:54.404 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:54.414 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:54.414 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:54.414 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 04:13:54.414 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:54.434 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 04:13:54.434 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 24 ms. 17-03-18 04:13:54.434 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 04:13:54.434 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:13:54.434 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28906 150\n [Camera] 17-03-18 04:13:54.634 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:55.044 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:55.044 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:55.054 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:55.054 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:55.054 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) start. 17-03-18 04:13:55.054 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:55.054 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:55.054 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:55.184 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:55.184 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:13:55.244 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28906 802 17-03-18 04:13:55.394 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:55.434 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 04:13:55.434 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 04:13:55.434 -07 000000012 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:55.434 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:55.434 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 04:13:55.554 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 371 ms. 17-03-18 04:13:55.554 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 04:13:55.554 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:55.554 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:55.564 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 507 ms. 17-03-18 04:13:55.594 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:55.594 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:55.594 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:55.594 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:55.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:55.594 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:55.594 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:55.594 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:13:55.604 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:55.604 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 04:13:55.784 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:13:55.784 -07 000000012 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:55.784 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28906 150' command took 2 ms to send, 1346 ms to get response, and 1354 ms overall 17-03-18 04:13:55.784 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 04:13:55.784 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 5 at Y-position 62.39501953125, Z-Position -0.131527177986366. ------ 17-03-18 04:13:55.794 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:13:55.794 -07 000000479 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13830 mm 17-03-18 04:13:55.794 -07 000000479 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:55.794 -07 000000585 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:13:55.794 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True) 17-03-18 04:13:55.794 -07 000000626 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm 17-03-18 04:13:55.794 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 30212, sync = True, waitForSettling = False) 17-03-18 04:13:55.794 -07 000000437 INF: Z Motor: Moving to -0.138302 mm, started at -0.131527 mm, distance = -6.77 um 17-03-18 04:13:55.804 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:55.804 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:13:55.804 -07 000000590 INF: FPGA: Recv YRDPOS 127785 17-03-18 04:13:55.814 -07 000000437 INF: FPGA: Xmit ZDACW 30212\n [Z Motor] 17-03-18 04:13:55.814 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-18 04:13:55.814 -07 000000626 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:55.814 -07 000000626 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:55.814 -07 000000626 INF: Y Motor: Moving 1340 steps-16 17-03-18 04:13:55.814 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 04:13:55.824 -07 000000437 INF: FPGA: 'ZDACW 30212' command took 0 ms to send, 0 ms to get response, and 21 ms overall 17-03-18 04:13:55.824 -07 000000455 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 04:13:55.834 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:55.844 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:55.844 -07 000000444 INF: FPGA: Recv ZDACR 30212 17-03-18 04:13:55.854 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 04:13:55.854 -07 000000437 INF: Z Motor: MoveAbsStepped took 52 ms (did NOT wait for settling yet)) 17-03-18 04:13:55.974 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 04:13:55.974 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 04:13:55.974 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:55.984 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 04:13:55.984 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 04:13:55.984 -07 000000611 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:55.984 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:55.984 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 04:13:55.984 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:13:55.994 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 04:13:56.024 -07 000000474 INF: FPGA: Recv FOCMRRFOC 17-03-18 04:13:56.024 -07 000000455 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall 17-03-18 04:13:56.204 -07 000000447 INF: FPGA: Recv YMVTILE 17-03-18 04:13:56.204 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 04:13:56.254 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:56.254 -07 000000444 INF: FPGA: Recv YRDPOS 129481 17-03-18 04:13:56.264 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:13:56.264 -07 000000626 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:56.264 -07 000000626 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm) 17-03-18 04:13:56.264 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.110 mm/sec 17-03-18 04:13:56.644 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:13:56.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:13:57.214 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:57.214 -07 000000455 INF: FPGA: Recv YRDPOS 129482 17-03-18 04:13:57.224 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:57.224 -07 000000626 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:57.254 -07 000000626 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:13:57.254 -07 000000626 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 04:13:57.254 -07 000000626 INF: Y Motor: Moved to 63.2236 after 1452 ms (table move) 17-03-18 04:13:57.254 -07 000000479 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138302 mm (DAC = 30212) 17-03-18 04:13:57.254 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:57.254 -07 000000512 INF: FPGA: Recv ZSGSRD 30820 17-03-18 04:13:57.264 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:13:57.264 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:57.264 -07 000000012 INF: FPGA: Recv ZSGSRD 30814 17-03-18 04:13:57.274 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:57.274 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:57.274 -07 000000579 INF: FPGA: Recv ZSGSRD 30820 17-03-18 04:13:57.284 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:57.284 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:57.284 -07 000000480 INF: FPGA: Recv ZSGSRD 30819 17-03-18 04:13:57.294 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:57.294 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:57.294 -07 000000626 INF: FPGA: Recv ZSGSRD 30821 17-03-18 04:13:57.304 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:57.304 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:57.304 -07 000000561 INF: FPGA: Recv ZSGSRD 30824 17-03-18 04:13:57.314 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:57.314 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:57.314 -07 000000474 INF: FPGA: Recv ZSGSRD 30814 17-03-18 04:13:57.324 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:57.324 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:57.324 -07 000000579 INF: FPGA: Recv ZSGSRD 30817 17-03-18 04:13:57.334 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:57.334 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:57.334 -07 000000480 INF: FPGA: Recv ZSGSRD 30813 17-03-18 04:13:57.344 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:57.344 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:57.344 -07 000000438 INF: FPGA: Recv ZSGSRD 30817 17-03-18 04:13:57.354 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:57.354 -07 000000479 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:57.354 -07 000000611 INF: FPGA: Recv ZPIEZORD 26564 17-03-18 04:13:57.364 -07 000000479 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:57.364 -07 000000479 INF: Z Motor: Piezo is near 36.7 V (nominally 0 to 100 V), expect near 46.1 V, since DAC is at 4.610 V. Piezo Error = -9.4 V. 17-03-18 04:13:57.364 -07 000000479 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.3 um, Read 10 ADC samples: Avg = 30818 (-137.5 uncal um), Error = 0.8 uncal um, Median = 30818 (-137.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30813 (-137.5 uncal um), Max = 30824 (-137.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:13:57.364 -07 000000479 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30818, posNoise = 6, negNoise = 5 17-03-18 04:13:57.364 -07 000000479 INF: Z Motor: After move to -0.138302, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:57.364 -07 000000479 INF: Z Motor: Settle wait time = 1456 ms, measure time = 106 ms (allowed 150 ms), total time = 1562 ms 17-03-18 04:13:57.364 -07 000000479 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 04:13:57.414 -07 000000479 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1617 ms 17-03-18 04:13:57.414 -07 000000479 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:13:57.414 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:57.414 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:57.414 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:57.414 -07 000000474 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 04:13:57.414 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:57.414 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:57.414 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:57.414 -07 000000474 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 04:13:57.424 -07 000000474 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 04:13:57.424 -07 000000474 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 04:13:57.434 -07 000000474 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms. 17-03-18 04:13:57.434 -07 000000474 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 13 ms. 17-03-18 04:13:57.434 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 04:13:57.474 -07 000000585 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 04:13:57.774 -07 000000487 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 04:13:57.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 04:13:57.774 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 04:13:57.784 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 617479552, 0x0, 559484976) start. 17-03-18 04:13:57.814 -07 000000438 INF: FPGA: Recv @CAMSNAP 380 17-03-18 04:13:57.814 -07 000000474 INF: FPGA: Recv CAMSNAP 17-03-18 04:13:57.814 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 377 ms to get response, and 384 ms overall 17-03-18 04:13:57.904 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 617479552, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 04:13:57.904 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:57.904 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 04:13:57.904 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 131 ms. 17-03-18 04:13:58.014 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:13:58.014 -07 000000512 INF: Autofocus start 17-03-18 04:13:58.014 -07 000000512 INF: MeasureProfile start 17-03-18 04:13:58.014 -07 000000437 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:13:58.024 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:13:58.024 -07 000000501 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 04:13:58.024 -07 000000512 INF: MeasureProfile done 17-03-18 04:13:58.024 -07 000000512 INF: X=32 Z correction [um]=0.1299841 17-03-18 04:13:58.024 -07 000000512 INF: Autofocus finished 17-03-18 04:13:58.224 -07 000000608 INF: FPGA: Recv FOCMRRIMG 17-03-18 04:13:58.224 -07 000000501 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 04:13:58.224 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.138304721795924. ---------- 17-03-18 04:13:58.234 -07 000000610 INF: Cycle 122 Tile 5 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:13:58.234 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28753, sync = True, waitForSettling = True) 17-03-18 04:13:58.234 -07 000000610 INF: Z Motor: Moving to -0.131623 mm, started at -0.138305 mm, distance = 6.68 um 17-03-18 04:13:58.234 -07 000000610 INF: FPGA: Xmit ZDACW 28753\n [Z Motor] 17-03-18 04:13:58.234 -07 000000512 INF: FPGA: Recv ZDACW 17-03-18 04:13:58.244 -07 000000610 INF: FPGA: 'ZDACW 28753' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:13:58.254 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:58.254 -07 000000579 INF: FPGA: Recv ZDACR 28753 17-03-18 04:13:58.264 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:58.264 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:13:58.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:58.414 -07 000000012 INF: FPGA: Recv ZSGSRD 29780 17-03-18 04:13:58.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:13:58.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:58.424 -07 000000474 INF: FPGA: Recv ZSGSRD 29779 17-03-18 04:13:58.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:58.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:58.434 -07 000000618 INF: FPGA: Recv ZSGSRD 29777 17-03-18 04:13:58.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:58.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:58.444 -07 000000438 INF: FPGA: Recv ZSGSRD 29782 17-03-18 04:13:58.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:58.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:58.454 -07 000000501 INF: FPGA: Recv ZSGSRD 29773 17-03-18 04:13:58.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:58.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:58.464 -07 000000611 INF: FPGA: Recv ZSGSRD 29772 17-03-18 04:13:58.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:58.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:58.474 -07 000000501 INF: FPGA: Recv ZSGSRD 29782 17-03-18 04:13:58.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:58.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:58.484 -07 000000437 INF: FPGA: Recv ZSGSRD 29777 17-03-18 04:13:58.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:58.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:58.494 -07 000000501 INF: FPGA: Recv ZSGSRD 29774 17-03-18 04:13:58.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:58.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:13:58.504 -07 000000012 INF: FPGA: Recv ZSGSRD 29779 17-03-18 04:13:58.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:58.514 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:13:58.514 -07 000000579 INF: FPGA: Recv ZPIEZORD 25233 17-03-18 04:13:58.524 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:58.524 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.387 V. Piezo Error = -10.0 V. 17-03-18 04:13:58.524 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.6 um, Read 10 ADC samples: Avg = 29778 (-130.8 uncal um), Error = 0.8 uncal um, Median = 29778 (-130.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29772 (-130.8 uncal um), Max = 29782 (-130.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:13:58.524 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29778, posNoise = 4, negNoise = 6 17-03-18 04:13:58.524 -07 000000610 INF: Z Motor: After move to -0.131623, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:13:58.524 -07 000000610 INF: Z Motor: MoveAbsStepped took 290 ms) 17-03-18 04:13:58.524 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:13:58.524 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:13:58.524 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:13:58.524 -07 000000437 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:13:58.524 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:13:58.524 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:13:58.524 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:13:58.524 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:13:58.524 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:13:58.524 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:13:58.524 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:13:58.524 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:13:58.534 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:13:58.534 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:13:58.534 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:13:58.534 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:13:58.534 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 04:13:58.544 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 04:13:58.544 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 04:13:58.544 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 04:13:58.544 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28929 150\n [Camera] 17-03-18 04:13:58.564 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.011254, 17-03-18 04:13:58.744 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:13:59.154 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:13:59.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:13:59.164 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:59.164 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:59.164 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) start. 17-03-18 04:13:59.164 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:13:59.164 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:13:59.164 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:59.164 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:59.164 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2334624192, 0x0, 418435064) start. 17-03-18 04:13:59.354 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28929 802 17-03-18 04:13:59.504 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:13:59.544 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 04:13:59.544 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 04:13:59.544 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:59.544 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2334624192, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 04:13:59.544 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 04:13:59.544 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:13:59.544 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-18 04:13:59.544 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 04:13:59.544 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-18 04:13:59.554 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 04:13:59.704 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:13:59.704 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:13:59.704 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:13:59.814 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:13:59.814 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:13:59.814 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:13:59.824 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:13:59.824 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2370046456, 0x0, 391868352) start. 17-03-18 04:13:59.824 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:13:59.824 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:13:59.894 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:13:59.894 -07 000000501 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:13:59.894 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28929 150' command took 2 ms to send, 1344 ms to get response, and 1351 ms overall 17-03-18 04:13:59.894 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.131686 17-03-18 04:13:59.894 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13169 mm 17-03-18 04:13:59.894 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:13:59.894 -07 000000479 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True) 17-03-18 04:13:59.904 -07 000000479 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm 17-03-18 04:13:59.904 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:13:59.904 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 28767, sync = True, waitForSettling = False) 17-03-18 04:13:59.904 -07 000000438 INF: Z Motor: Moving to -0.131687 mm, started at -0.131624 mm, distance = -0.06 um 17-03-18 04:13:59.904 -07 000000579 INF: FPGA: Recv YRDPOS 129482 17-03-18 04:13:59.914 -07 000000438 INF: FPGA: Xmit ZDACW 28767\n [Z Motor] 17-03-18 04:13:59.914 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:13:59.914 -07 000000479 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:13:59.914 -07 000000479 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:13:59.914 -07 000000479 INF: Y Motor: Moving 1342 steps-19 17-03-18 04:13:59.914 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 04:13:59.924 -07 000000438 INF: FPGA: 'ZDACW 28767' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:59.924 -07 000000479 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:13:59.934 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:13:59.934 -07 000000618 INF: FPGA: Recv ZDACR 28767 17-03-18 04:13:59.944 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:13:59.944 -07 000000438 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet)) 17-03-18 04:14:00.194 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 374 ms. 17-03-18 04:14:00.194 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms. 17-03-18 04:14:00.194 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:00.204 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2370046456, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 04:14:00.204 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 04:14:00.204 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:00.204 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:00.204 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:00.204 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 502 ms. 17-03-18 04:14:00.214 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 04:14:00.294 -07 000000444 INF: FPGA: Recv YMVTILE 17-03-18 04:14:00.294 -07 000000479 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 04:14:00.344 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:00.354 -07 000000611 INF: FPGA: Recv YRDPOS 131187 17-03-18 04:14:00.354 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 04:14:00.354 -07 000000479 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:00.354 -07 000000479 INF: Y Motor: Position error before settling (table move) = -13 encoder counts (-0.006 mm) 17-03-18 04:14:00.354 -07 000000479 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.839 mm, average velocity = 2.162 mm/sec 17-03-18 04:14:01.304 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:01.304 -07 000000012 INF: FPGA: Recv YRDPOS 131188 17-03-18 04:14:01.314 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:01.314 -07 000000479 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:01.344 -07 000000479 INF: Y Motor: After move to 64.062607, error = -0.005966, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:01.344 -07 000000479 INF: Y Motor: Position error after settling (table move) = -12 encoder counts (-0.006 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 04:14:01.344 -07 000000479 INF: Y Motor: Moved to 64.0566 after 1447 ms (table move) 17-03-18 04:14:01.354 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131687 mm (DAC = 28767) 17-03-18 04:14:01.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.354 -07 000000501 INF: FPGA: Recv ZSGSRD 29788 17-03-18 04:14:01.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.364 -07 000000444 INF: FPGA: Recv ZSGSRD 29787 17-03-18 04:14:01.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.374 -07 000000626 INF: FPGA: Recv ZSGSRD 29787 17-03-18 04:14:01.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.384 -07 000000618 INF: FPGA: Recv ZSGSRD 29785 17-03-18 04:14:01.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.394 -07 000000626 INF: FPGA: Recv ZSGSRD 29786 17-03-18 04:14:01.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.404 -07 000000501 INF: FPGA: Recv ZSGSRD 29785 17-03-18 04:14:01.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.414 -07 000000626 INF: FPGA: Recv ZSGSRD 29786 17-03-18 04:14:01.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.424 -07 000000625 INF: FPGA: Recv ZSGSRD 29789 17-03-18 04:14:01.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.434 -07 000000561 INF: FPGA: Recv ZSGSRD 29794 17-03-18 04:14:01.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.444 -07 000000012 INF: FPGA: Recv ZSGSRD 29790 17-03-18 04:14:01.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.454 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:01.454 -07 000000611 INF: FPGA: Recv ZPIEZORD 25236 17-03-18 04:14:01.464 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.464 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.390 V. Piezo Error = -10.0 V. 17-03-18 04:14:01.464 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29788 (-130.9 uncal um), Error = 0.8 uncal um, Median = 29787 (-130.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29785 (-130.9 uncal um), Max = 29794 (-130.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 04:14:01.464 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29788, posNoise = 6, negNoise = 3 17-03-18 04:14:01.464 -07 000000610 INF: Z Motor: After move to -0.131687, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:01.464 -07 000000610 INF: Z Motor: Settle wait time = 1449 ms, measure time = 110 ms (allowed 150 ms), total time = 1559 ms 17-03-18 04:14:01.464 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:01.504 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms 17-03-18 04:14:01.504 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:01.504 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.056640625, Z-position -0.13168778328991. ---------- 17-03-18 04:14:01.504 -07 000000610 INF: Cycle 122 Tile 6 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:01.504 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28590, sync = True, waitForSettling = True) 17-03-18 04:14:01.504 -07 000000610 INF: Z Motor: Moving to -0.130877 mm, started at -0.131688 mm, distance = 0.81 um 17-03-18 04:14:01.504 -07 000000610 INF: FPGA: Xmit ZDACW 28590\n [Z Motor] 17-03-18 04:14:01.504 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 04:14:01.514 -07 000000610 INF: FPGA: 'ZDACW 28590' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:01.514 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:01.514 -07 000000487 INF: FPGA: Recv ZDACR 28590 17-03-18 04:14:01.524 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.524 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:01.644 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:14:01.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:14:01.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.674 -07 000000012 INF: FPGA: Recv ZSGSRD 29668 17-03-18 04:14:01.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:01.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.684 -07 000000561 INF: FPGA: Recv ZSGSRD 29668 17-03-18 04:14:01.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.694 -07 000000626 INF: FPGA: Recv ZSGSRD 29663 17-03-18 04:14:01.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.704 -07 000000480 INF: FPGA: Recv ZSGSRD 29664 17-03-18 04:14:01.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.714 -07 000000590 INF: FPGA: Recv ZSGSRD 29662 17-03-18 04:14:01.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.724 -07 000000438 INF: FPGA: Recv ZSGSRD 29657 17-03-18 04:14:01.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.734 -07 000000561 INF: FPGA: Recv ZSGSRD 29660 17-03-18 04:14:01.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.744 -07 000000438 INF: FPGA: Recv ZSGSRD 29663 17-03-18 04:14:01.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.754 -07 000000590 INF: FPGA: Recv ZSGSRD 29660 17-03-18 04:14:01.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:01.764 -07 000000585 INF: FPGA: Recv ZSGSRD 29660 17-03-18 04:14:01.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.774 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:01.774 -07 000000444 INF: FPGA: Recv ZPIEZORD 25118 17-03-18 04:14:01.784 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:01.784 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.363 V. Piezo Error = -10.0 V. 17-03-18 04:14:01.784 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29662 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29662 (-130.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29657 (-130.1 uncal um), Max = 29668 (-130.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:14:01.784 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29662, posNoise = 6, negNoise = 5 17-03-18 04:14:01.784 -07 000000610 INF: Z Motor: After move to -0.130877, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:01.784 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:14:01.784 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:01.784 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:01.784 -07 000000474 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:01.784 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:01.784 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:01.784 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:01.784 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:01.784 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:01.784 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-18 04:14:01.784 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:01.784 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:01.784 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:01.784 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:14:01.784 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:01.784 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 04:14:01.794 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:01.794 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 04:14:01.794 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 04:14:01.794 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 04:14:01.794 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 04:14:01.804 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28767 150\n [Camera] 17-03-18 04:14:02.004 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:02.414 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:02.414 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:02.424 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:02.424 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:02.424 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:02.424 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:02.424 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:02.434 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) start. 17-03-18 04:14:02.434 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:02.434 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2334624192, 0x0, 418435064) start. 17-03-18 04:14:02.614 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28767 802 17-03-18 04:14:02.764 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:02.804 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 04:14:02.804 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms. 17-03-18 04:14:02.804 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:02.804 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2334624192, 0x0, 418435064) end. Duration was 370 ms. 17-03-18 04:14:02.804 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 04:14:02.804 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:02.804 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:02.804 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 04:14:02.804 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:02.814 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 04:14:02.964 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:02.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:02.964 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:02.964 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:02.964 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:02.964 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:02.964 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:02.964 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 04:14:02.964 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:02.964 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:14:03.154 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP 1348 17-03-18 04:14:03.154 -07 000000611 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:03.154 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28767 150' command took 2 ms to send, 1347 ms to get response, and 1355 ms overall 17-03-18 04:14:03.284 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.131422 17-03-18 04:14:03.284 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13142 mm 17-03-18 04:14:03.284 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:03.284 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True) 17-03-18 04:14:03.284 -07 000000438 INF: Y Motor: Moving to 64.8926 mm, started at 64.0566 mm, delta = 0.8360 mm 17-03-18 04:14:03.284 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:03.284 -07 000000625 INF: Z Motor: Entering MoveAbsStepped (DAC = 28709, sync = True, waitForSettling = False) 17-03-18 04:14:03.284 -07 000000625 INF: Z Motor: Moving to -0.131421 mm, started at -0.130878 mm, distance = -0.54 um 17-03-18 04:14:03.294 -07 000000625 INF: FPGA: Xmit ZDACW 28709\n [Z Motor] 17-03-18 04:14:03.294 -07 000000626 INF: FPGA: Recv YRDPOS 131188 17-03-18 04:14:03.294 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:14:03.294 -07 000000438 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:03.294 -07 000000438 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:03.294 -07 000000438 INF: Y Motor: Moving 1338 steps-13 17-03-18 04:14:03.294 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 04:14:03.304 -07 000000625 INF: FPGA: 'ZDACW 28709' command took 0 ms to send, 0 ms to get response, and 14 ms overall 17-03-18 04:14:03.304 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:03.314 -07 000000625 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:03.314 -07 000000487 INF: FPGA: Recv ZDACR 28709 17-03-18 04:14:03.324 -07 000000625 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:14:03.324 -07 000000625 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet)) 17-03-18 04:14:03.364 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 395 ms. 17-03-18 04:14:03.364 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-18 04:14:03.364 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:03.364 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 398 ms. 17-03-18 04:14:03.364 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-18 04:14:03.364 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:03.364 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:03.364 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-18 04:14:03.364 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:03.374 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms. 17-03-18 04:14:03.674 -07 000000474 INF: FPGA: Recv YMVTILE 17-03-18 04:14:03.674 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 04:14:03.724 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:03.724 -07 000000012 INF: FPGA: Recv YRDPOS 132870 17-03-18 04:14:03.734 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:14:03.734 -07 000000438 INF: Y Motor: Encoder = 132870 = motor step 103804.7 = 64.8779 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:03.734 -07 000000438 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 04:14:03.734 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.836 mm, average velocity = 2.160 mm/sec 17-03-18 04:14:03.924 -07 000000625 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.02213, 17-03-18 04:14:04.684 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:04.684 -07 000000444 INF: FPGA: Recv YRDPOS 132871 17-03-18 04:14:04.694 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:04.694 -07 000000438 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:04.714 -07 000000438 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:04.724 -07 000000438 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 04:14:04.724 -07 000000438 INF: Y Motor: Moved to 64.8784 after 1436 ms (table move) 17-03-18 04:14:04.724 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131421 mm (DAC = 28709) 17-03-18 04:14:04.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:04.724 -07 000000512 INF: FPGA: Recv ZSGSRD 29752 17-03-18 04:14:04.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:14:04.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:04.734 -07 000000438 INF: FPGA: Recv ZSGSRD 29748 17-03-18 04:14:04.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:04.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:04.744 -07 000000618 INF: FPGA: Recv ZSGSRD 29753 17-03-18 04:14:04.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:04.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:04.754 -07 000000487 INF: FPGA: Recv ZSGSRD 29748 17-03-18 04:14:04.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:04.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:04.764 -07 000000455 INF: FPGA: Recv ZSGSRD 29750 17-03-18 04:14:04.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:04.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:04.774 -07 000000438 INF: FPGA: Recv ZSGSRD 29743 17-03-18 04:14:04.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:04.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:04.784 -07 000000611 INF: FPGA: Recv ZSGSRD 29749 17-03-18 04:14:04.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:04.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:04.794 -07 000000438 INF: FPGA: Recv ZSGSRD 29744 17-03-18 04:14:04.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:04.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:04.804 -07 000000625 INF: FPGA: Recv ZSGSRD 29741 17-03-18 04:14:04.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:04.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:04.814 -07 000000437 INF: FPGA: Recv ZSGSRD 29751 17-03-18 04:14:04.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:04.824 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:04.824 -07 000000585 INF: FPGA: Recv ZPIEZORD 25219 17-03-18 04:14:04.834 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:04.834 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.381 V. Piezo Error = -9.9 V. 17-03-18 04:14:04.834 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29748 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29748 (-130.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29741 (-130.6 uncal um), Max = 29753 (-130.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:14:04.834 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29748, posNoise = 5, negNoise = 7 17-03-18 04:14:04.834 -07 000000610 INF: Z Motor: After move to -0.131421, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:04.834 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 107 ms (allowed 150 ms), total time = 1544 ms 17-03-18 04:14:04.834 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:04.884 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms 17-03-18 04:14:04.884 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:04.884 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.13143081480424. ---------- 17-03-18 04:14:04.884 -07 000000610 INF: Cycle 122 Tile 7 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:04.884 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28532, sync = True, waitForSettling = True) 17-03-18 04:14:04.884 -07 000000610 INF: Z Motor: Moving to -0.130611 mm, started at -0.131431 mm, distance = 0.82 um 17-03-18 04:14:04.884 -07 000000610 INF: FPGA: Xmit ZDACW 28532\n [Z Motor] 17-03-18 04:14:04.894 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 04:14:04.894 -07 000000610 INF: FPGA: 'ZDACW 28532' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:14:04.894 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:04.894 -07 000000438 INF: FPGA: Recv ZDACR 28532 17-03-18 04:14:04.904 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:04.904 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:05.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:05.054 -07 000000625 INF: FPGA: Recv ZSGSRD 29619 17-03-18 04:14:05.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:05.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:05.064 -07 000000608 INF: FPGA: Recv ZSGSRD 29628 17-03-18 04:14:05.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:05.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:05.074 -07 000000611 INF: FPGA: Recv ZSGSRD 29629 17-03-18 04:14:05.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:05.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:05.084 -07 000000626 INF: FPGA: Recv ZSGSRD 29623 17-03-18 04:14:05.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:05.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:05.094 -07 000000438 INF: FPGA: Recv ZSGSRD 29626 17-03-18 04:14:05.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:05.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:05.104 -07 000000480 INF: FPGA: Recv ZSGSRD 29620 17-03-18 04:14:05.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:05.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:05.114 -07 000000447 INF: FPGA: Recv ZSGSRD 29621 17-03-18 04:14:05.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:05.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:05.124 -07 000000512 INF: FPGA: Recv ZSGSRD 29622 17-03-18 04:14:05.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:05.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:05.134 -07 000000561 INF: FPGA: Recv ZSGSRD 29618 17-03-18 04:14:05.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:05.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:05.144 -07 000000444 INF: FPGA: Recv ZSGSRD 29630 17-03-18 04:14:05.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:05.154 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:05.154 -07 000000474 INF: FPGA: Recv ZPIEZORD 25023 17-03-18 04:14:05.164 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:05.164 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.354 V. Piezo Error = -10.1 V. 17-03-18 04:14:05.164 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29624 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29622 (-129.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29618 (-129.8 uncal um), Max = 29630 (-129.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:14:05.164 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29624, posNoise = 6, negNoise = 6 17-03-18 04:14:05.164 -07 000000610 INF: Z Motor: After move to -0.130611, error = -0.000023, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:05.164 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 04:14:05.164 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:05.164 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:05.164 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:05.164 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:05.164 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:05.164 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:05.164 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:05.164 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:05.164 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:05.164 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:05.164 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:14:05.164 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:05.164 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 04:14:05.174 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:05.174 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:14:05.174 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:05.184 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 04:14:05.184 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:14:05.184 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-18 04:14:05.184 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:14:05.184 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28709 150\n [Camera] 17-03-18 04:14:05.394 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 195 17-03-18 04:14:05.804 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:05.804 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:05.804 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:05.804 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:05.804 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:05.814 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:05.814 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:05.814 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) start. 17-03-18 04:14:05.814 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:05.814 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 04:14:05.994 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28709 802 17-03-18 04:14:06.144 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:06.184 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 373 ms. 17-03-18 04:14:06.184 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 04:14:06.184 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:06.184 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) end. Duration was 374 ms. 17-03-18 04:14:06.184 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms. 17-03-18 04:14:06.184 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:06.194 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:14:06.194 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 04:14:06.194 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:14:06.194 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 04:14:06.344 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:06.344 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:06.354 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:06.354 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:06.354 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) start. 17-03-18 04:14:06.354 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:06.354 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:06.354 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:06.354 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:06.354 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) start. 17-03-18 04:14:06.544 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:14:06.544 -07 000000455 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:06.544 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28709 150' command took 2 ms to send, 1341 ms to get response, and 1352 ms overall 17-03-18 04:14:06.544 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.131254 17-03-18 04:14:06.544 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13125 mm 17-03-18 04:14:06.544 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:06.544 -07 000000487 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True) 17-03-18 04:14:06.544 -07 000000487 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm 17-03-18 04:14:06.544 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:06.544 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 28672, sync = True, waitForSettling = False) 17-03-18 04:14:06.544 -07 000000561 INF: Z Motor: Moving to -0.131252 mm, started at -0.130634 mm, distance = -0.62 um 17-03-18 04:14:06.544 -07 000000474 INF: FPGA: Recv YRDPOS 132871 17-03-18 04:14:06.554 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:14:06.554 -07 000000487 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:06.554 -07 000000487 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:06.554 -07 000000487 INF: Y Motor: Moving 1351 steps-30 17-03-18 04:14:06.554 -07 000000487 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:06.564 -07 000000561 INF: FPGA: Xmit ZDACW 28672\n [Z Motor] 17-03-18 04:14:06.564 -07 000000585 INF: FPGA: Recv ZDACW 17-03-18 04:14:06.574 -07 000000561 INF: FPGA: 'ZDACW 28672' command took 0 ms to send, 0 ms to get response, and 23 ms overall 17-03-18 04:14:06.574 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:06.574 -07 000000611 INF: FPGA: Recv ZDACR 28672 17-03-18 04:14:06.584 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:06.584 -07 000000561 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet)) 17-03-18 04:14:06.644 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:14:06.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:14:06.734 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) end. Duration was 385 ms. 17-03-18 04:14:06.734 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 04:14:06.734 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:06.734 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) end. Duration was 384 ms. 17-03-18 04:14:06.734 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms. 17-03-18 04:14:06.734 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:06.744 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:06.744 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 04:14:06.744 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:06.744 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-18 04:14:06.934 -07 000000447 INF: FPGA: Recv YMVTILE 17-03-18 04:14:06.934 -07 000000487 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 381 ms overall 17-03-18 04:14:06.984 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:06.984 -07 000000618 INF: FPGA: Recv YRDPOS 134581 17-03-18 04:14:06.994 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:14:06.994 -07 000000487 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:06.994 -07 000000487 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm) 17-03-18 04:14:06.994 -07 000000487 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 382 ms, distance = 0.844 mm, average velocity = 2.210 mm/sec 17-03-18 04:14:07.944 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:07.944 -07 000000455 INF: FPGA: Recv YRDPOS 134581 17-03-18 04:14:07.954 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:07.954 -07 000000487 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:07.984 -07 000000487 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:07.984 -07 000000487 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:14:07.984 -07 000000487 INF: Y Motor: Moved to 65.7134 after 1440 ms (table move) 17-03-18 04:14:07.984 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131252 mm (DAC = 28672) 17-03-18 04:14:07.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:07.994 -07 000000579 INF: FPGA: Recv ZSGSRD 29729 17-03-18 04:14:07.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 04:14:07.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:07.994 -07 000000455 INF: FPGA: Recv ZSGSRD 29719 17-03-18 04:14:08.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:14:08.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.004 -07 000000012 INF: FPGA: Recv ZSGSRD 29724 17-03-18 04:14:08.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.014 -07 000000626 INF: FPGA: Recv ZSGSRD 29724 17-03-18 04:14:08.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.024 -07 000000501 INF: FPGA: Recv ZSGSRD 29723 17-03-18 04:14:08.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.034 -07 000000444 INF: FPGA: Recv ZSGSRD 29726 17-03-18 04:14:08.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.044 -07 000000611 INF: FPGA: Recv ZSGSRD 29719 17-03-18 04:14:08.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.054 -07 000000455 INF: FPGA: Recv ZSGSRD 29717 17-03-18 04:14:08.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.064 -07 000000579 INF: FPGA: Recv ZSGSRD 29721 17-03-18 04:14:08.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.074 -07 000000479 INF: FPGA: Recv ZSGSRD 29723 17-03-18 04:14:08.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.084 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:08.084 -07 000000455 INF: FPGA: Recv ZPIEZORD 25209 17-03-18 04:14:08.094 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.094 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.375 V. Piezo Error = -9.9 V. 17-03-18 04:14:08.094 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29722 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29723 (-130.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29717 (-130.4 uncal um), Max = 29729 (-130.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:14:08.094 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29722, posNoise = 7, negNoise = 5 17-03-18 04:14:08.094 -07 000000610 INF: Z Motor: After move to -0.131252, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:08.094 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 102 ms (allowed 150 ms), total time = 1544 ms 17-03-18 04:14:08.094 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:08.144 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms 17-03-18 04:14:08.144 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:08.144 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.131263785288554. ---------- 17-03-18 04:14:08.144 -07 000000610 INF: Cycle 122 Tile 8 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:08.144 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28496, sync = True, waitForSettling = True) 17-03-18 04:14:08.144 -07 000000610 INF: Z Motor: Moving to -0.130446 mm, started at -0.131264 mm, distance = 0.82 um 17-03-18 04:14:08.144 -07 000000610 INF: FPGA: Xmit ZDACW 28496\n [Z Motor] 17-03-18 04:14:08.144 -07 000000625 INF: FPGA: Recv ZDACW 17-03-18 04:14:08.154 -07 000000610 INF: FPGA: 'ZDACW 28496' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:08.154 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:08.154 -07 000000561 INF: FPGA: Recv ZDACR 28496 17-03-18 04:14:08.164 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.164 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:08.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.314 -07 000000611 INF: FPGA: Recv ZSGSRD 29593 17-03-18 04:14:08.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:08.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.324 -07 000000501 INF: FPGA: Recv ZSGSRD 29595 17-03-18 04:14:08.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.334 -07 000000608 INF: FPGA: Recv ZSGSRD 29601 17-03-18 04:14:08.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.344 -07 000000625 INF: FPGA: Recv ZSGSRD 29600 17-03-18 04:14:08.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.354 -07 000000626 INF: FPGA: Recv ZSGSRD 29591 17-03-18 04:14:08.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:08.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.364 -07 000000625 INF: FPGA: Recv ZSGSRD 29595 17-03-18 04:14:08.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.374 -07 000000501 INF: FPGA: Recv ZSGSRD 29597 17-03-18 04:14:08.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.384 -07 000000611 INF: FPGA: Recv ZSGSRD 29596 17-03-18 04:14:08.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.394 -07 000000474 INF: FPGA: Recv ZSGSRD 29597 17-03-18 04:14:08.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:08.404 -07 000000012 INF: FPGA: Recv ZSGSRD 29596 17-03-18 04:14:08.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.414 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:08.414 -07 000000480 INF: FPGA: Recv ZPIEZORD 25047 17-03-18 04:14:08.424 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:08.424 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.348 V. Piezo Error = -10.0 V. 17-03-18 04:14:08.424 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.4 um, Read 10 ADC samples: Avg = 29596 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29596 (-129.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29591 (-129.6 uncal um), Max = 29601 (-129.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:14:08.424 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29596, posNoise = 5, negNoise = 5 17-03-18 04:14:08.424 -07 000000610 INF: Z Motor: After move to -0.130446, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:08.424 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms) 17-03-18 04:14:08.424 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:08.424 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:08.424 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:08.424 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:08.424 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:08.424 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:08.424 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:08.424 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:08.424 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:14:08.424 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:08.424 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:08.424 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:08.434 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:14:08.434 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:08.434 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-18 04:14:08.434 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:08.444 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 04:14:08.444 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:14:08.444 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 04:14:08.444 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:14:08.444 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28672 150\n [Camera] 17-03-18 04:14:08.654 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:09.064 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:09.064 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:09.074 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:09.074 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:09.074 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) start. 17-03-18 04:14:09.074 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:09.074 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:09.074 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:09.074 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:09.074 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 04:14:09.264 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28672 802 17-03-18 04:14:09.284 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.000345, 17-03-18 04:14:09.414 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:09.454 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1165594328, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 04:14:09.454 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 04:14:09.454 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:09.454 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 379 ms. 17-03-18 04:14:09.454 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-18 04:14:09.454 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:09.454 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:14:09.454 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 04:14:09.454 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:09.464 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 04:14:09.614 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:09.614 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:09.614 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:09.614 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:09.614 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start. 17-03-18 04:14:09.614 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:09.614 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:09.614 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:09.614 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:09.614 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start. 17-03-18 04:14:09.804 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:14:09.804 -07 000000608 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:09.804 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28672 150' command took 2 ms to send, 1344 ms to get response, and 1354 ms overall 17-03-18 04:14:09.804 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 04:14:09.804 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 9 at Y-position 65.71337890625, Z-Position -0.130454334558692. ------ 17-03-18 04:14:09.814 -07 000000438 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13686 mm 17-03-18 04:14:09.814 -07 000000438 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:09.814 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True) 17-03-18 04:14:09.814 -07 000000561 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm 17-03-18 04:14:09.814 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 29897, sync = True, waitForSettling = False) 17-03-18 04:14:09.814 -07 000000480 INF: Z Motor: Moving to -0.136860 mm, started at -0.130454 mm, distance = -6.41 um 17-03-18 04:14:09.824 -07 000000480 INF: FPGA: Xmit ZDACW 29897\n [Z Motor] 17-03-18 04:14:09.824 -07 000000618 INF: FPGA: Recv ZDACW 17-03-18 04:14:09.834 -07 000000487 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:14:09.834 -07 000000480 INF: FPGA: 'ZDACW 29897' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-18 04:14:09.834 -07 000000608 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:14:09.844 -07 000000487 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 04:14:09.844 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:09.844 -07 000000437 INF: FPGA: Recv YRDPOS 134581 17-03-18 04:14:09.854 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 35 ms overall 17-03-18 04:14:09.854 -07 000000561 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:09.854 -07 000000561 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:09.854 -07 000000561 INF: Y Motor: Moving 1343 steps-19 17-03-18 04:14:09.864 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:09.864 -07 000000474 INF: FPGA: Recv ZDACR 29897 17-03-18 04:14:09.874 -07 000000487 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 04:14:09.874 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 39 ms overall 17-03-18 04:14:09.874 -07 000000480 INF: Z Motor: MoveAbsStepped took 55 ms (did NOT wait for settling yet)) 17-03-18 04:14:09.884 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:09.994 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 381 ms. 17-03-18 04:14:09.994 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 04:14:09.994 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:09.994 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 379 ms. 17-03-18 04:14:09.994 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-18 04:14:09.994 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:10.004 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:10.004 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 04:14:10.004 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:10.004 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 04:14:10.074 -07 000000579 INF: FPGA: Recv FOCMRRFOC 17-03-18 04:14:10.074 -07 000000487 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 232 ms overall 17-03-18 04:14:10.254 -07 000000618 INF: FPGA: Recv YMVTILE 17-03-18 04:14:10.254 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 407 ms overall 17-03-18 04:14:10.304 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:10.314 -07 000000579 INF: FPGA: Recv YRDPOS 136270 17-03-18 04:14:10.314 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:14:10.314 -07 000000561 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:10.314 -07 000000561 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 04:14:10.314 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 408 ms, distance = 0.839 mm, average velocity = 2.057 mm/sec 17-03-18 04:14:11.264 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:11.264 -07 000000480 INF: FPGA: Recv YRDPOS 136270 17-03-18 04:14:11.274 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:11.274 -07 000000561 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:11.304 -07 000000561 INF: Y Motor: After move to 66.552605, error = -0.014519, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:11.304 -07 000000561 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:14:11.304 -07 000000561 INF: Y Motor: Moved to 66.5381 after 1488 ms (table move) 17-03-18 04:14:11.304 -07 000000438 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136860 mm (DAC = 29897) 17-03-18 04:14:11.304 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:11.304 -07 000000590 INF: FPGA: Recv ZSGSRD 30594 17-03-18 04:14:11.314 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:11.314 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:11.314 -07 000000455 INF: FPGA: Recv ZSGSRD 30596 17-03-18 04:14:11.324 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:11.324 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:11.324 -07 000000512 INF: FPGA: Recv ZSGSRD 30596 17-03-18 04:14:11.334 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:11.334 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:11.334 -07 000000480 INF: FPGA: Recv ZSGSRD 30596 17-03-18 04:14:11.344 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:11.344 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:11.344 -07 000000561 INF: FPGA: Recv ZSGSRD 30591 17-03-18 04:14:11.354 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:11.354 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:11.354 -07 000000512 INF: FPGA: Recv ZSGSRD 30592 17-03-18 04:14:11.364 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:11.364 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:11.364 -07 000000561 INF: FPGA: Recv ZSGSRD 30596 17-03-18 04:14:11.374 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:11.374 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:11.374 -07 000000455 INF: FPGA: Recv ZSGSRD 30588 17-03-18 04:14:11.384 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:11.384 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:11.384 -07 000000487 INF: FPGA: Recv ZSGSRD 30592 17-03-18 04:14:11.394 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:11.394 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:11.394 -07 000000501 INF: FPGA: Recv ZSGSRD 30596 17-03-18 04:14:11.404 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:11.404 -07 000000438 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:11.404 -07 000000512 INF: FPGA: Recv ZPIEZORD 26378 17-03-18 04:14:11.414 -07 000000438 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:11.414 -07 000000438 INF: Z Motor: Piezo is near 36.4 V (nominally 0 to 100 V), expect near 45.6 V, since DAC is at 4.562 V. Piezo Error = -9.3 V. 17-03-18 04:14:11.414 -07 000000438 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.9 um, Read 10 ADC samples: Avg = 30594 (-136.1 uncal um), Error = 0.8 uncal um, Median = 30595 (-136.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 30588 (-136.0 uncal um), Max = 30596 (-136.1 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:14:11.414 -07 000000438 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30594, posNoise = 2, negNoise = 6 17-03-18 04:14:11.414 -07 000000438 INF: Z Motor: After move to -0.136860, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:11.414 -07 000000438 INF: Z Motor: Settle wait time = 1490 ms, measure time = 105 ms (allowed 150 ms), total time = 1595 ms 17-03-18 04:14:11.414 -07 000000438 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:11.464 -07 000000438 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1649 ms 17-03-18 04:14:11.464 -07 000000438 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:11.464 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:11.464 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:11.464 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:11.464 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:11.464 -07 000000437 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 04:14:11.464 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:11.464 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 04:14:11.464 -07 000000437 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 04:14:11.474 -07 000000437 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 04:14:11.474 -07 000000437 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 04:14:11.484 -07 000000437 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-18 04:14:11.484 -07 000000437 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms. 17-03-18 04:14:11.484 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 04:14:11.534 -07 000000012 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 04:14:11.654 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:14:11.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:14:11.834 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 04:14:11.834 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 04:14:11.834 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 04:14:11.834 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 613074248, 0x0, 559484976) start. 17-03-18 04:14:11.874 -07 000000611 INF: FPGA: Recv @CAMSNAP 380 17-03-18 04:14:11.874 -07 000000444 INF: FPGA: Recv CAMSNAP 17-03-18 04:14:11.874 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 383 ms to get response, and 387 ms overall 17-03-18 04:14:11.964 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 613074248, 0x0, 559484976) end. Duration was 126 ms. 17-03-18 04:14:11.964 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:11.964 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 04:14:11.964 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms. 17-03-18 04:14:11.974 -07 000000447 INF: Autofocus start 17-03-18 04:14:11.974 -07 000000447 INF: MeasureProfile start 17-03-18 04:14:11.974 -07 000000590 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:14:11.974 -07 000000455 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:14:11.984 -07 000000590 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:11.984 -07 000000590 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 04:14:11.984 -07 000000447 INF: MeasureProfile done 17-03-18 04:14:11.984 -07 000000447 INF: X=16 Z correction [um]=0.0530179 17-03-18 04:14:11.984 -07 000000447 INF: Autofocus finished 17-03-18 04:14:12.184 -07 000000585 INF: FPGA: Recv FOCMRRIMG 17-03-18 04:14:12.184 -07 000000590 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 04:14:12.184 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5380859375, Z-position -0.13686569827617. ---------- 17-03-18 04:14:12.184 -07 000000610 INF: Cycle 122 Tile 9 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:12.194 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28422, sync = True, waitForSettling = True) 17-03-18 04:14:12.194 -07 000000610 INF: Z Motor: Moving to -0.130108 mm, started at -0.136866 mm, distance = 6.76 um 17-03-18 04:14:12.194 -07 000000610 INF: FPGA: Xmit ZDACW 28422\n [Z Motor] 17-03-18 04:14:12.194 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 04:14:12.204 -07 000000610 INF: FPGA: 'ZDACW 28422' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:14:12.204 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:12.204 -07 000000444 INF: FPGA: Recv ZDACR 28422 17-03-18 04:14:12.214 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.214 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:12.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:12.364 -07 000000618 INF: FPGA: Recv ZSGSRD 29545 17-03-18 04:14:12.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:12.374 -07 000000611 INF: FPGA: Recv ZSGSRD 29543 17-03-18 04:14:12.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:12.384 -07 000000438 INF: FPGA: Recv ZSGSRD 29543 17-03-18 04:14:12.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:12.394 -07 000000437 INF: FPGA: Recv ZSGSRD 29542 17-03-18 04:14:12.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:12.404 -07 000000585 INF: FPGA: Recv ZSGSRD 29542 17-03-18 04:14:12.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:12.414 -07 000000561 INF: FPGA: Recv ZSGSRD 29545 17-03-18 04:14:12.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:12.424 -07 000000611 INF: FPGA: Recv ZSGSRD 29548 17-03-18 04:14:12.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:12.434 -07 000000438 INF: FPGA: Recv ZSGSRD 29540 17-03-18 04:14:12.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:12.444 -07 000000012 INF: FPGA: Recv ZSGSRD 29541 17-03-18 04:14:12.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:12.454 -07 000000455 INF: FPGA: Recv ZSGSRD 29541 17-03-18 04:14:12.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.464 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:12.464 -07 000000480 INF: FPGA: Recv ZPIEZORD 24979 17-03-18 04:14:12.474 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:12.474 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.337 V. Piezo Error = -10.0 V. 17-03-18 04:14:12.474 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.1 um, Read 10 ADC samples: Avg = 29543 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29542 (-129.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29540 (-129.3 uncal um), Max = 29548 (-129.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 04:14:12.474 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29543, posNoise = 5, negNoise = 3 17-03-18 04:14:12.474 -07 000000610 INF: Z Motor: After move to -0.130108, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:12.474 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-18 04:14:12.474 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:12.474 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:12.474 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:12.474 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:12.474 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:12.474 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:12.474 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:12.474 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:12.474 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 04:14:12.474 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:12.474 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:14:12.474 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:12.484 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:14:12.484 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:12.484 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:14:12.484 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:12.494 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 04:14:12.494 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:14:12.494 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 04:14:12.494 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 24 ms. 17-03-18 04:14:12.504 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28598 150\n [Camera] 17-03-18 04:14:12.704 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:13.114 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:13.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:13.114 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:13.114 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:13.114 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start. 17-03-18 04:14:13.124 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:13.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:13.124 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:13.124 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:13.124 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start. 17-03-18 04:14:13.314 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28598 802 17-03-18 04:14:13.464 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:13.494 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 04:14:13.494 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-18 04:14:13.494 -07 000000590 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:13.494 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 04:14:13.494 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 04:14:13.494 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:13.504 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:14:13.504 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 04:14:13.504 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:13.504 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 04:14:13.664 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:13.664 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:13.664 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:13.664 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:13.664 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start. 17-03-18 04:14:13.664 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:13.664 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:13.664 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:13.664 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:13.664 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-18 04:14:13.854 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:14:13.854 -07 000000437 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:13.854 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28598 150' command took 2 ms to send, 1342 ms to get response, and 1352 ms overall 17-03-18 04:14:13.854 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.130923 17-03-18 04:14:13.854 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13092 mm 17-03-18 04:14:13.854 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:13.854 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True) 17-03-18 04:14:13.854 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 28600, sync = True, waitForSettling = False) 17-03-18 04:14:13.854 -07 000000579 INF: Z Motor: Moving to -0.130922 mm, started at -0.130114 mm, distance = -0.81 um 17-03-18 04:14:13.854 -07 000000579 INF: FPGA: Xmit ZDACW 28600\n [Z Motor] 17-03-18 04:14:13.854 -07 000000618 INF: Y Motor: Moving to 67.3826 mm, started at 66.5381 mm, delta = 0.8445 mm 17-03-18 04:14:13.864 -07 000000012 INF: FPGA: Recv ZDACW 17-03-18 04:14:13.864 -07 000000579 INF: FPGA: 'ZDACW 28600' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 04:14:13.864 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:13.864 -07 000000447 INF: FPGA: Recv YRDPOS 136271 17-03-18 04:14:13.874 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-18 04:14:13.874 -07 000000618 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:13.874 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:13.874 -07 000000437 INF: FPGA: Recv ZDACR 28600 17-03-18 04:14:13.874 -07 000000618 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:13.874 -07 000000618 INF: Y Motor: Moving 1350 steps-30 17-03-18 04:14:13.884 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:14:13.884 -07 000000579 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet)) 17-03-18 04:14:14.014 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:14.054 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 392 ms. 17-03-18 04:14:14.054 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 04:14:14.054 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:14.054 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 394 ms. 17-03-18 04:14:14.054 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-18 04:14:14.054 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:14.064 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:14:14.064 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:14:14.064 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms. 17-03-18 04:14:14.074 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 405 ms. 17-03-18 04:14:14.394 -07 000000579 INF: FPGA: Recv YMVTILE 17-03-18 04:14:14.394 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 136 ms to send, 375 ms to get response, and 520 ms overall 17-03-18 04:14:14.444 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:14.444 -07 000000438 INF: FPGA: Recv YRDPOS 137976 17-03-18 04:14:14.454 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:14:14.454 -07 000000618 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:14.454 -07 000000618 INF: Y Motor: Position error before settling (table move) = -24 encoder counts (-0.012 mm) 17-03-18 04:14:14.454 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 520 ms, distance = 0.845 mm, average velocity = 1.624 mm/sec 17-03-18 04:14:14.644 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.009895, 17-03-18 04:14:15.404 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:15.404 -07 000000512 INF: FPGA: Recv YRDPOS 137976 17-03-18 04:14:15.414 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:15.414 -07 000000618 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:15.454 -07 000000618 INF: Y Motor: After move to 67.382607, error = -0.011513, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:15.454 -07 000000618 INF: Y Motor: Position error after settling (table move) = -24 encoder counts (-0.012 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:14:15.454 -07 000000618 INF: Y Motor: Moved to 67.3711 after 1595 ms (table move) 17-03-18 04:14:15.454 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130922 mm (DAC = 28600) 17-03-18 04:14:15.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.454 -07 000000590 INF: FPGA: Recv ZSGSRD 29678 17-03-18 04:14:15.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:15.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.464 -07 000000618 INF: FPGA: Recv ZSGSRD 29663 17-03-18 04:14:15.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.474 -07 000000608 INF: FPGA: Recv ZSGSRD 29670 17-03-18 04:14:15.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.484 -07 000000618 INF: FPGA: Recv ZSGSRD 29666 17-03-18 04:14:15.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.494 -07 000000455 INF: FPGA: Recv ZSGSRD 29669 17-03-18 04:14:15.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.504 -07 000000512 INF: FPGA: Recv ZSGSRD 29674 17-03-18 04:14:15.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.514 -07 000000474 INF: FPGA: Recv ZSGSRD 29670 17-03-18 04:14:15.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.524 -07 000000437 INF: FPGA: Recv ZSGSRD 29675 17-03-18 04:14:15.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.534 -07 000000611 INF: FPGA: Recv ZSGSRD 29668 17-03-18 04:14:15.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.544 -07 000000455 INF: FPGA: Recv ZSGSRD 29669 17-03-18 04:14:15.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.554 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:15.554 -07 000000447 INF: FPGA: Recv ZPIEZORD 25176 17-03-18 04:14:15.564 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.564 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.364 V. Piezo Error = -9.9 V. 17-03-18 04:14:15.564 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29670 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29670 (-130.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29663 (-130.1 uncal um), Max = 29678 (-130.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:14:15.564 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29670, posNoise = 8, negNoise = 7 17-03-18 04:14:15.564 -07 000000610 INF: Z Motor: After move to -0.130922, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:15.564 -07 000000610 INF: Z Motor: Settle wait time = 1597 ms, measure time = 106 ms (allowed 150 ms), total time = 1703 ms 17-03-18 04:14:15.564 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:15.614 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1754 ms 17-03-18 04:14:15.614 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:15.614 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37109375, Z-position -0.130929726257183. ---------- 17-03-18 04:14:15.614 -07 000000610 INF: Cycle 122 Tile 10 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:15.614 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28423, sync = True, waitForSettling = True) 17-03-18 04:14:15.614 -07 000000610 INF: Z Motor: Moving to -0.130112 mm, started at -0.130930 mm, distance = 0.82 um 17-03-18 04:14:15.614 -07 000000610 INF: FPGA: Xmit ZDACW 28423\n [Z Motor] 17-03-18 04:14:15.614 -07 000000438 INF: FPGA: Recv ZDACW 17-03-18 04:14:15.624 -07 000000610 INF: FPGA: 'ZDACW 28423' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:14:15.624 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:15.624 -07 000000512 INF: FPGA: Recv ZDACR 28423 17-03-18 04:14:15.634 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.634 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:15.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.784 -07 000000561 INF: FPGA: Recv ZSGSRD 29541 17-03-18 04:14:15.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.794 -07 000000579 INF: FPGA: Recv ZSGSRD 29543 17-03-18 04:14:15.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.804 -07 000000626 INF: FPGA: Recv ZSGSRD 29540 17-03-18 04:14:15.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.814 -07 000000438 INF: FPGA: Recv ZSGSRD 29548 17-03-18 04:14:15.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.824 -07 000000487 INF: FPGA: Recv ZSGSRD 29552 17-03-18 04:14:15.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.834 -07 000000438 INF: FPGA: Recv ZSGSRD 29550 17-03-18 04:14:15.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.844 -07 000000012 INF: FPGA: Recv ZSGSRD 29536 17-03-18 04:14:15.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.854 -07 000000437 INF: FPGA: Recv ZSGSRD 29544 17-03-18 04:14:15.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.864 -07 000000455 INF: FPGA: Recv ZSGSRD 29543 17-03-18 04:14:15.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:15.874 -07 000000479 INF: FPGA: Recv ZSGSRD 29539 17-03-18 04:14:15.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.884 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:15.884 -07 000000438 INF: FPGA: Recv ZPIEZORD 25018 17-03-18 04:14:15.894 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:15.894 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.337 V. Piezo Error = -9.9 V. 17-03-18 04:14:15.894 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.1 um, Read 10 ADC samples: Avg = 29544 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29543 (-129.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29536 (-129.3 uncal um), Max = 29552 (-129.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 04:14:15.894 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29544, posNoise = 8, negNoise = 8 17-03-18 04:14:15.894 -07 000000610 INF: Z Motor: After move to -0.130112, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:15.894 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms) 17-03-18 04:14:15.894 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:15.894 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:15.894 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:15.894 -07 000000474 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:15.894 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:15.894 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:15.894 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-18 04:14:15.894 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:15.894 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:15.894 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:15.894 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:15.894 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:15.904 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 04:14:15.904 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:15.904 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 04:14:15.904 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:15.914 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 04:14:15.914 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 04:14:15.914 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 04:14:15.914 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 04:14:15.914 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28600 150\n [Camera] 17-03-18 04:14:16.114 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:16.534 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:16.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:16.534 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:16.534 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:16.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:16.534 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:16.534 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:16.534 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-18 04:14:16.544 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:16.544 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:14:16.654 -07 000000479 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:14:16.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:14:16.724 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28600 802 17-03-18 04:14:16.874 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:16.914 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 378 ms. 17-03-18 04:14:16.914 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 04:14:16.914 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 04:14:16.914 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:16.914 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-18 04:14:16.914 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:16.924 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:14:16.924 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:14:16.924 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 04:14:16.934 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 04:14:17.074 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:17.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:17.074 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:17.074 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:17.074 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:17.074 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:17.074 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:17.074 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:14:17.084 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:17.084 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start. 17-03-18 04:14:17.264 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:14:17.264 -07 000000512 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:17.264 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28600 150' command took 2 ms to send, 1345 ms to get response, and 1351 ms overall 17-03-18 04:14:17.264 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.130530 17-03-18 04:14:17.264 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13053 mm 17-03-18 04:14:17.264 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:17.264 -07 000000437 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True) 17-03-18 04:14:17.274 -07 000000437 INF: Y Motor: Moving to 68.2126 mm, started at 67.3711 mm, delta = 0.8415 mm 17-03-18 04:14:17.274 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:17.274 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 28514, sync = True, waitForSettling = False) 17-03-18 04:14:17.274 -07 000000455 INF: Z Motor: Moving to -0.130529 mm, started at -0.130120 mm, distance = -0.41 um 17-03-18 04:14:17.274 -07 000000590 INF: FPGA: Recv YRDPOS 137976 17-03-18 04:14:17.284 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:14:17.284 -07 000000437 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:17.284 -07 000000437 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:17.284 -07 000000437 INF: Y Motor: Moving 1346 steps-24 17-03-18 04:14:17.284 -07 000000455 INF: FPGA: Xmit ZDACW 28514\n [Z Motor] 17-03-18 04:14:17.284 -07 000000625 INF: FPGA: Recv ZDACW 17-03-18 04:14:17.294 -07 000000455 INF: FPGA: 'ZDACW 28514' command took 0 ms to send, 0 ms to get response, and 18 ms overall 17-03-18 04:14:17.294 -07 000000437 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:17.304 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:17.304 -07 000000487 INF: FPGA: Recv ZDACR 28514 17-03-18 04:14:17.314 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:14:17.314 -07 000000455 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet)) 17-03-18 04:14:17.474 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 392 ms. 17-03-18 04:14:17.474 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-18 04:14:17.474 -07 000000438 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:17.474 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:17.474 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 04:14:17.474 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 390 ms. 17-03-18 04:14:17.474 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 04:14:17.474 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:17.474 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:17.484 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms. 17-03-18 04:14:17.664 -07 000000626 INF: FPGA: Recv YMVTILE 17-03-18 04:14:17.664 -07 000000437 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall 17-03-18 04:14:17.714 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:17.714 -07 000000444 INF: FPGA: Recv YRDPOS 139682 17-03-18 04:14:17.724 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:14:17.724 -07 000000437 INF: Y Motor: Encoder = 139682 = motor step 109126.6 = 68.2041 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:17.724 -07 000000437 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm) 17-03-18 04:14:17.724 -07 000000437 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.842 mm, average velocity = 2.169 mm/sec 17-03-18 04:14:18.674 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:18.674 -07 000000611 INF: FPGA: Recv YRDPOS 139683 17-03-18 04:14:18.684 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:18.684 -07 000000437 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:18.704 -07 000000437 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:18.704 -07 000000437 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 04:14:18.704 -07 000000437 INF: Y Motor: Moved to 68.2046 after 1436 ms (table move) 17-03-18 04:14:18.714 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130529 mm (DAC = 28514) 17-03-18 04:14:18.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:18.714 -07 000000512 INF: FPGA: Recv ZSGSRD 29611 17-03-18 04:14:18.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:18.724 -07 000000480 INF: FPGA: Recv ZSGSRD 29614 17-03-18 04:14:18.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:18.734 -07 000000626 INF: FPGA: Recv ZSGSRD 29609 17-03-18 04:14:18.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:18.744 -07 000000480 INF: FPGA: Recv ZSGSRD 29608 17-03-18 04:14:18.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:18.754 -07 000000626 INF: FPGA: Recv ZSGSRD 29604 17-03-18 04:14:18.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:18.764 -07 000000561 INF: FPGA: Recv ZSGSRD 29607 17-03-18 04:14:18.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:18.774 -07 000000437 INF: FPGA: Recv ZSGSRD 29604 17-03-18 04:14:18.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:18.784 -07 000000625 INF: FPGA: Recv ZSGSRD 29612 17-03-18 04:14:18.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:18.794 -07 000000480 INF: FPGA: Recv ZSGSRD 29601 17-03-18 04:14:18.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:18.804 -07 000000626 INF: FPGA: Recv ZSGSRD 29616 17-03-18 04:14:18.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.814 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:18.814 -07 000000618 INF: FPGA: Recv ZPIEZORD 25078 17-03-18 04:14:18.824 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.824 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.351 V. Piezo Error = -9.9 V. 17-03-18 04:14:18.824 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29609 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29608 (-129.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29601 (-129.7 uncal um), Max = 29616 (-129.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 04:14:18.824 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29609, posNoise = 7, negNoise = 8 17-03-18 04:14:18.824 -07 000000610 INF: Z Motor: After move to -0.130529, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:18.824 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 110 ms (allowed 150 ms), total time = 1548 ms 17-03-18 04:14:18.824 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:18.864 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms 17-03-18 04:14:18.864 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:18.864 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.130537849316535. ---------- 17-03-18 04:14:18.864 -07 000000610 INF: Cycle 122 Tile 11 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:18.864 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28337, sync = True, waitForSettling = True) 17-03-18 04:14:18.864 -07 000000610 INF: Z Motor: Moving to -0.129718 mm, started at -0.130538 mm, distance = 0.82 um 17-03-18 04:14:18.864 -07 000000610 INF: FPGA: Xmit ZDACW 28337\n [Z Motor] 17-03-18 04:14:18.864 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 04:14:18.874 -07 000000610 INF: FPGA: 'ZDACW 28337' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:14:18.874 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:18.874 -07 000000012 INF: FPGA: Recv ZDACR 28337 17-03-18 04:14:18.884 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:18.884 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:19.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:19.034 -07 000000579 INF: FPGA: Recv ZSGSRD 29486 17-03-18 04:14:19.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:19.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:19.044 -07 000000487 INF: FPGA: Recv ZSGSRD 29486 17-03-18 04:14:19.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:19.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:19.054 -07 000000585 INF: FPGA: Recv ZSGSRD 29484 17-03-18 04:14:19.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:19.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:19.064 -07 000000447 INF: FPGA: Recv ZSGSRD 29475 17-03-18 04:14:19.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:19.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:19.074 -07 000000012 INF: FPGA: Recv ZSGSRD 29487 17-03-18 04:14:19.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:19.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:19.084 -07 000000438 INF: FPGA: Recv ZSGSRD 29484 17-03-18 04:14:19.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:19.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:19.094 -07 000000487 INF: FPGA: Recv ZSGSRD 29477 17-03-18 04:14:19.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:19.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:19.104 -07 000000501 INF: FPGA: Recv ZSGSRD 29481 17-03-18 04:14:19.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:19.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:19.114 -07 000000561 INF: FPGA: Recv ZSGSRD 29487 17-03-18 04:14:19.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:19.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:19.124 -07 000000480 INF: FPGA: Recv ZSGSRD 29488 17-03-18 04:14:19.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:19.134 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:19.134 -07 000000455 INF: FPGA: Recv ZPIEZORD 24896 17-03-18 04:14:19.144 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:19.144 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.324 V. Piezo Error = -10.1 V. 17-03-18 04:14:19.144 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.7 um, Read 10 ADC samples: Avg = 29484 (-129.0 uncal um), Error = 0.8 uncal um, Median = 29485 (-129.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29475 (-128.9 uncal um), Max = 29488 (-129.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 04:14:19.144 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29484, posNoise = 4, negNoise = 9 17-03-18 04:14:19.144 -07 000000610 INF: Z Motor: After move to -0.129718, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:19.144 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 04:14:19.144 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:19.144 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:19.144 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:19.144 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:19.144 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:19.144 -07 000000479 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:19.144 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:19.144 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:19.144 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:19.144 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:19.144 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:14:19.144 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:19.154 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:14:19.154 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:19.154 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:14:19.154 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:19.174 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 18 ms. 17-03-18 04:14:19.174 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms. 17-03-18 04:14:19.174 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 18 ms. 17-03-18 04:14:19.174 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms. 17-03-18 04:14:19.174 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28514 150\n [Camera] 17-03-18 04:14:19.374 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:19.794 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:19.794 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:19.794 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:19.794 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:19.794 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:19.924 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:19.924 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start. 17-03-18 04:14:19.924 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:19.934 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:19.934 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start. 17-03-18 04:14:19.984 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28514 802 17-03-18 04:14:20.004 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.031682, 17-03-18 04:14:20.134 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:20.304 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 373 ms. 17-03-18 04:14:20.304 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms. 17-03-18 04:14:20.304 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:20.304 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 370 ms. 17-03-18 04:14:20.304 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms. 17-03-18 04:14:20.304 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:20.304 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:20.304 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 515 ms. 17-03-18 04:14:20.304 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:20.314 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms. 17-03-18 04:14:20.334 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:20.334 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:20.334 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:20.334 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:20.334 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:20.334 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:20.334 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:20.334 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 04:14:20.344 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:20.344 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 04:14:20.524 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:14:20.524 -07 000000512 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:20.524 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28514 150' command took 2 ms to send, 1344 ms to get response, and 1351 ms overall 17-03-18 04:14:20.524 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.130368 17-03-18 04:14:20.524 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13037 mm 17-03-18 04:14:20.524 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:20.524 -07 000000479 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True) 17-03-18 04:14:20.524 -07 000000479 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm 17-03-18 04:14:20.534 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:20.534 -07 000000625 INF: Z Motor: Entering MoveAbsStepped (DAC = 28479, sync = True, waitForSettling = False) 17-03-18 04:14:20.534 -07 000000625 INF: Z Motor: Moving to -0.130369 mm, started at -0.129735 mm, distance = -0.63 um 17-03-18 04:14:20.534 -07 000000487 INF: FPGA: Recv YRDPOS 139683 17-03-18 04:14:20.544 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:20.544 -07 000000479 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:20.544 -07 000000479 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:20.544 -07 000000479 INF: Y Motor: Moving 1341 steps-17 17-03-18 04:14:20.544 -07 000000625 INF: FPGA: Xmit ZDACW 28479\n [Z Motor] 17-03-18 04:14:20.544 -07 000000437 INF: FPGA: Recv ZDACW 17-03-18 04:14:20.554 -07 000000625 INF: FPGA: 'ZDACW 28479' command took 0 ms to send, 0 ms to get response, and 17 ms overall 17-03-18 04:14:20.554 -07 000000625 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:20.554 -07 000000487 INF: FPGA: Recv ZDACR 28479 17-03-18 04:14:20.564 -07 000000625 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:20.564 -07 000000625 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet)) 17-03-18 04:14:20.564 -07 000000479 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:20.714 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 375 ms. 17-03-18 04:14:20.714 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-18 04:14:20.714 -07 000000438 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:20.714 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 04:14:20.714 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 04:14:20.714 -07 000000579 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:20.714 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:20.714 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 04:14:20.724 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:20.724 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 04:14:20.934 -07 000000626 INF: FPGA: Recv YMVTILE 17-03-18 04:14:20.934 -07 000000479 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 398 ms overall 17-03-18 04:14:20.984 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:20.994 -07 000000608 INF: FPGA: Recv YRDPOS 141366 17-03-18 04:14:20.994 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:14:20.994 -07 000000479 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:20.994 -07 000000479 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm) 17-03-18 04:14:20.994 -07 000000479 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.838 mm, average velocity = 2.106 mm/sec 17-03-18 04:14:21.654 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:14:21.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:14:21.944 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:21.944 -07 000000447 INF: FPGA: Recv YRDPOS 141366 17-03-18 04:14:21.954 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:21.954 -07 000000479 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:21.974 -07 000000479 INF: Y Motor: After move to 69.042610, error = -0.016243, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:21.974 -07 000000479 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:14:21.974 -07 000000479 INF: Y Motor: Moved to 69.0264 after 1450 ms (table move) 17-03-18 04:14:21.984 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130369 mm (DAC = 28479) 17-03-18 04:14:21.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:21.984 -07 000000608 INF: FPGA: Recv ZSGSRD 29580 17-03-18 04:14:21.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:14:21.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:21.994 -07 000000626 INF: FPGA: Recv ZSGSRD 29580 17-03-18 04:14:22.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.004 -07 000000437 INF: FPGA: Recv ZSGSRD 29587 17-03-18 04:14:22.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.014 -07 000000455 INF: FPGA: Recv ZSGSRD 29581 17-03-18 04:14:22.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.024 -07 000000479 INF: FPGA: Recv ZSGSRD 29581 17-03-18 04:14:22.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.034 -07 000000012 INF: FPGA: Recv ZSGSRD 29584 17-03-18 04:14:22.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.044 -07 000000480 INF: FPGA: Recv ZSGSRD 29581 17-03-18 04:14:22.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.054 -07 000000479 INF: FPGA: Recv ZSGSRD 29578 17-03-18 04:14:22.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.064 -07 000000012 INF: FPGA: Recv ZSGSRD 29583 17-03-18 04:14:22.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.074 -07 000000590 INF: FPGA: Recv ZSGSRD 29589 17-03-18 04:14:22.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.084 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:22.084 -07 000000512 INF: FPGA: Recv ZPIEZORD 25061 17-03-18 04:14:22.094 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.094 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.346 V. Piezo Error = -9.9 V. 17-03-18 04:14:22.094 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.4 um, Read 10 ADC samples: Avg = 29582 (-129.6 uncal um), Error = 0.8 uncal um, Median = 29581 (-129.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29578 (-129.6 uncal um), Max = 29589 (-129.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 04:14:22.094 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29582, posNoise = 7, negNoise = 4 17-03-18 04:14:22.094 -07 000000610 INF: Z Motor: After move to -0.130369, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:22.094 -07 000000610 INF: Z Motor: Settle wait time = 1449 ms, measure time = 109 ms (allowed 150 ms), total time = 1558 ms 17-03-18 04:14:22.094 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:22.144 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms 17-03-18 04:14:22.144 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:22.144 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.0263671875, Z-position -0.130364395588708. ---------- 17-03-18 04:14:22.144 -07 000000610 INF: Cycle 122 Tile 12 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:22.144 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28302, sync = True, waitForSettling = True) 17-03-18 04:14:22.144 -07 000000610 INF: Z Motor: Moving to -0.129558 mm, started at -0.130364 mm, distance = 0.81 um 17-03-18 04:14:22.144 -07 000000610 INF: FPGA: Xmit ZDACW 28302\n [Z Motor] 17-03-18 04:14:22.144 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 04:14:22.154 -07 000000610 INF: FPGA: 'ZDACW 28302' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:22.154 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:22.154 -07 000000474 INF: FPGA: Recv ZDACR 28302 17-03-18 04:14:22.164 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.164 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:22.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.314 -07 000000625 INF: FPGA: Recv ZSGSRD 29459 17-03-18 04:14:22.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:22.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.324 -07 000000474 INF: FPGA: Recv ZSGSRD 29468 17-03-18 04:14:22.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.334 -07 000000437 INF: FPGA: Recv ZSGSRD 29453 17-03-18 04:14:22.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.344 -07 000000585 INF: FPGA: Recv ZSGSRD 29458 17-03-18 04:14:22.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.354 -07 000000512 INF: FPGA: Recv ZSGSRD 29458 17-03-18 04:14:22.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.364 -07 000000487 INF: FPGA: Recv ZSGSRD 29460 17-03-18 04:14:22.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.374 -07 000000618 INF: FPGA: Recv ZSGSRD 29457 17-03-18 04:14:22.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.384 -07 000000487 INF: FPGA: Recv ZSGSRD 29453 17-03-18 04:14:22.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.394 -07 000000618 INF: FPGA: Recv ZSGSRD 29447 17-03-18 04:14:22.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:22.404 -07 000000447 INF: FPGA: Recv ZSGSRD 29455 17-03-18 04:14:22.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.414 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:22.414 -07 000000585 INF: FPGA: Recv ZPIEZORD 24871 17-03-18 04:14:22.424 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:22.424 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.319 V. Piezo Error = -10.1 V. 17-03-18 04:14:22.424 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.6 um, Read 10 ADC samples: Avg = 29457 (-128.8 uncal um), Error = 0.8 uncal um, Median = 29458 (-128.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 29447 (-128.7 uncal um), Max = 29468 (-128.9 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-18 04:14:22.424 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29457, posNoise = 11, negNoise = 10 17-03-18 04:14:22.424 -07 000000610 INF: Z Motor: After move to -0.129558, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:22.424 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:14:22.424 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:22.424 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:22.424 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:22.424 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:22.424 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:22.424 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:22.424 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:22.424 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:22.424 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:14:22.424 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:22.424 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:22.424 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:22.434 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:14:22.434 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:22.434 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-18 04:14:22.434 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:22.444 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms. 17-03-18 04:14:22.444 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms. 17-03-18 04:14:22.444 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms. 17-03-18 04:14:22.444 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms. 17-03-18 04:14:22.444 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28479 150\n [Camera] 17-03-18 04:14:22.644 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:23.064 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:23.064 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:23.064 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:23.064 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:23.064 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:23.064 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:23.064 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:23.064 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) start. 17-03-18 04:14:23.064 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:23.064 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start. 17-03-18 04:14:23.254 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28479 802 17-03-18 04:14:23.404 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:23.454 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 390 ms. 17-03-18 04:14:23.454 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 04:14:23.454 -07 000000438 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:23.464 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:23.464 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms. 17-03-18 04:14:23.464 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2299201928, 0x0, 418435064) end. Duration was 395 ms. 17-03-18 04:14:23.464 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 04:14:23.464 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:23.464 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:23.474 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms. 17-03-18 04:14:23.604 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:23.604 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:23.604 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:23.604 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:23.604 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) start. 17-03-18 04:14:23.604 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:23.604 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:23.614 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:23.734 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:23.734 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start. 17-03-18 04:14:23.794 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:14:23.794 -07 000000474 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:23.794 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28479 150' command took 3 ms to send, 1348 ms to get response, and 1351 ms overall 17-03-18 04:14:23.804 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 04:14:23.804 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 13 at Y-position 69.0263671875, Z-Position -0.129561369070988. ------ 17-03-18 04:14:23.804 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:14:23.804 -07 000000561 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13601 mm 17-03-18 04:14:23.804 -07 000000561 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:23.804 -07 000000437 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:14:23.804 -07 000000479 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True) 17-03-18 04:14:23.804 -07 000000479 INF: Y Motor: Moving to 69.8726 mm, started at 69.0264 mm, delta = 0.8462 mm 17-03-18 04:14:23.804 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 29711, sync = True, waitForSettling = False) 17-03-18 04:14:23.804 -07 000000512 INF: Z Motor: Moving to -0.136008 mm, started at -0.129561 mm, distance = -6.45 um 17-03-18 04:14:23.814 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:14:23.814 -07 000000512 INF: FPGA: Xmit ZDACW 29711\n [Z Motor] 17-03-18 04:14:23.814 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 04:14:23.824 -07 000000512 INF: FPGA: 'ZDACW 29711' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 04:14:23.824 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:23.824 -07 000000438 INF: FPGA: Recv YRDPOS 141367 17-03-18 04:14:23.834 -07 000000455 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 04:14:23.834 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 21 ms overall 17-03-18 04:14:23.834 -07 000000479 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:23.834 -07 000000479 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:23.834 -07 000000479 INF: Y Motor: Moving 1353 steps-33 17-03-18 04:14:23.844 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:23.844 -07 000000579 INF: FPGA: Recv ZDACR 29711 17-03-18 04:14:23.854 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 04:14:23.854 -07 000000512 INF: Z Motor: MoveAbsStepped took 41 ms (did NOT wait for settling yet)) 17-03-18 04:14:23.854 -07 000000479 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:23.994 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) end. Duration was 389 ms. 17-03-18 04:14:23.994 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-18 04:14:23.994 -07 000000590 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:24.004 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:24.004 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 04:14:24.034 -07 000000444 INF: FPGA: Recv FOCMRRFOC 17-03-18 04:14:24.034 -07 000000455 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall 17-03-18 04:14:24.114 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 373 ms. 17-03-18 04:14:24.114 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms. 17-03-18 04:14:24.114 -07 000000608 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:24.114 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:24.124 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 510 ms. 17-03-18 04:14:24.224 -07 000000625 INF: FPGA: Recv YMVTILE 17-03-18 04:14:24.224 -07 000000479 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 392 ms overall 17-03-18 04:14:24.284 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:24.284 -07 000000626 INF: FPGA: Recv YRDPOS 143079 17-03-18 04:14:24.294 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:14:24.294 -07 000000479 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:24.294 -07 000000479 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm) 17-03-18 04:14:24.294 -07 000000479 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 393 ms, distance = 0.846 mm, average velocity = 2.153 mm/sec 17-03-18 04:14:25.244 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:25.244 -07 000000437 INF: FPGA: Recv YRDPOS 143079 17-03-18 04:14:25.254 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:25.254 -07 000000479 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:25.284 -07 000000479 INF: Y Motor: After move to 69.872612, error = -0.009819, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:25.284 -07 000000479 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:14:25.284 -07 000000479 INF: Y Motor: Moved to 69.8628 after 1472 ms (table move) 17-03-18 04:14:25.284 -07 000000561 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136008 mm (DAC = 29711) 17-03-18 04:14:25.284 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:25.284 -07 000000579 INF: FPGA: Recv ZSGSRD 30460 17-03-18 04:14:25.294 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 04:14:25.294 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:25.294 -07 000000012 INF: FPGA: Recv ZSGSRD 30447 17-03-18 04:14:25.304 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:25.304 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:25.304 -07 000000447 INF: FPGA: Recv ZSGSRD 30461 17-03-18 04:14:25.314 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:25.314 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:25.314 -07 000000437 INF: FPGA: Recv ZSGSRD 30465 17-03-18 04:14:25.324 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:25.324 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:25.324 -07 000000438 INF: FPGA: Recv ZSGSRD 30456 17-03-18 04:14:25.334 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:25.334 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:25.334 -07 000000585 INF: FPGA: Recv ZSGSRD 30453 17-03-18 04:14:25.344 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:25.344 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:25.344 -07 000000455 INF: FPGA: Recv ZSGSRD 30461 17-03-18 04:14:25.354 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:25.364 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:25.364 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.030322, 17-03-18 04:14:25.364 -07 000000474 INF: FPGA: Recv ZSGSRD 30467 17-03-18 04:14:25.374 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:14:25.374 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:25.374 -07 000000437 INF: FPGA: Recv ZSGSRD 30464 17-03-18 04:14:25.384 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:25.404 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:25.404 -07 000000437 INF: FPGA: Recv ZSGSRD 30456 17-03-18 04:14:25.414 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 04:14:25.414 -07 000000561 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:25.414 -07 000000579 INF: FPGA: Recv ZPIEZORD 26265 17-03-18 04:14:25.424 -07 000000561 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:25.424 -07 000000561 INF: Z Motor: Piezo is near 36.1 V (nominally 0 to 100 V), expect near 45.3 V, since DAC is at 4.534 V. Piezo Error = -9.2 V. 17-03-18 04:14:25.424 -07 000000561 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.0 um, Read 10 ADC samples: Avg = 30459 (-135.2 uncal um), Error = 0.8 uncal um, Median = 30460 (-135.2 uncal um), StdDev = 6 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 30447 (-135.1 uncal um), Max = 30467 (-135.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 12 (0.1 uncal um) 17-03-18 04:14:25.424 -07 000000561 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30459, posNoise = 8, negNoise = 12 17-03-18 04:14:25.424 -07 000000561 INF: Z Motor: After move to -0.136008, error = 0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:25.424 -07 000000561 INF: Z Motor: Settle wait time = 1475 ms, measure time = 137 ms (allowed 150 ms), total time = 1612 ms 17-03-18 04:14:25.424 -07 000000561 INF: Z Motor: Waiting extra 13 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:25.444 -07 000000561 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1636 ms 17-03-18 04:14:25.444 -07 000000561 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:25.444 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:25.444 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:25.444 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:25.444 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:25.444 -07 000000487 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 04:14:25.444 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:25.444 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:25.444 -07 000000487 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 04:14:25.454 -07 000000487 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 04:14:25.454 -07 000000487 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 04:14:25.464 -07 000000487 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-18 04:14:25.464 -07 000000487 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms. 17-03-18 04:14:25.464 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 04:14:25.514 -07 000000479 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 04:14:25.814 -07 000000437 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 04:14:25.814 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 04:14:25.814 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 04:14:25.814 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) start. 17-03-18 04:14:25.844 -07 000000487 INF: FPGA: Recv @CAMSNAP 380 17-03-18 04:14:25.854 -07 000000512 INF: FPGA: Recv CAMSNAP 17-03-18 04:14:25.854 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 385 ms overall 17-03-18 04:14:25.934 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) end. Duration was 120 ms. 17-03-18 04:14:25.934 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:25.934 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 04:14:25.934 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 123 ms. 17-03-18 04:14:25.954 -07 000000512 INF: Autofocus start 17-03-18 04:14:25.954 -07 000000512 INF: MeasureProfile start 17-03-18 04:14:25.964 -07 000000512 INF: MeasureProfile done 17-03-18 04:14:25.964 -07 000000512 INF: X=-16 Z correction [um]=-0.08128808 17-03-18 04:14:25.964 -07 000000512 INF: Autofocus finished 17-03-18 04:14:25.974 -07 000000012 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:14:25.974 -07 000000590 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:14:25.984 -07 000000012 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 24 ms overall 17-03-18 04:14:25.984 -07 000000012 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 04:14:26.184 -07 000000590 INF: FPGA: Recv FOCMRRIMG 17-03-18 04:14:26.184 -07 000000012 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 04:14:26.184 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86279296875, Z-position -0.135998429637032. ---------- 17-03-18 04:14:26.184 -07 000000610 INF: Cycle 122 Tile 13 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:26.194 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28206, sync = True, waitForSettling = True) 17-03-18 04:14:26.194 -07 000000610 INF: Z Motor: Moving to -0.129119 mm, started at -0.135998 mm, distance = 6.88 um 17-03-18 04:14:26.194 -07 000000610 INF: FPGA: Xmit ZDACW 28206\n [Z Motor] 17-03-18 04:14:26.194 -07 000000579 INF: FPGA: Recv ZDACW 17-03-18 04:14:26.204 -07 000000610 INF: FPGA: 'ZDACW 28206' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:14:26.204 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:26.204 -07 000000474 INF: FPGA: Recv ZDACR 28206 17-03-18 04:14:26.214 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.214 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:26.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:26.364 -07 000000479 INF: FPGA: Recv ZSGSRD 29387 17-03-18 04:14:26.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:26.374 -07 000000487 INF: FPGA: Recv ZSGSRD 29390 17-03-18 04:14:26.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:26.384 -07 000000626 INF: FPGA: Recv ZSGSRD 29391 17-03-18 04:14:26.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:26.394 -07 000000512 INF: FPGA: Recv ZSGSRD 29390 17-03-18 04:14:26.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:26.404 -07 000000437 INF: FPGA: Recv ZSGSRD 29391 17-03-18 04:14:26.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:26.414 -07 000000479 INF: FPGA: Recv ZSGSRD 29386 17-03-18 04:14:26.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:26.424 -07 000000474 INF: FPGA: Recv ZSGSRD 29390 17-03-18 04:14:26.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:26.434 -07 000000626 INF: FPGA: Recv ZSGSRD 29393 17-03-18 04:14:26.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:26.444 -07 000000512 INF: FPGA: Recv ZSGSRD 29389 17-03-18 04:14:26.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:26.454 -07 000000437 INF: FPGA: Recv ZSGSRD 29390 17-03-18 04:14:26.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.464 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:26.464 -07 000000479 INF: FPGA: Recv ZPIEZORD 24827 17-03-18 04:14:26.474 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:26.474 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.304 V. Piezo Error = -10.0 V. 17-03-18 04:14:26.474 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.1 um, Read 10 ADC samples: Avg = 29390 (-128.4 uncal um), Error = 0.8 uncal um, Median = 29390 (-128.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29386 (-128.3 uncal um), Max = 29393 (-128.4 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 04:14:26.474 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29390, posNoise = 3, negNoise = 4 17-03-18 04:14:26.474 -07 000000610 INF: Z Motor: After move to -0.129119, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:26.474 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms) 17-03-18 04:14:26.474 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:26.474 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:26.474 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:26.474 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:26.474 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:26.474 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:26.474 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:26.474 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:26.474 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:26.474 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:26.474 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:14:26.474 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:26.484 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:14:26.484 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:26.484 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:14:26.484 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:26.494 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 04:14:26.494 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 04:14:26.494 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms. 17-03-18 04:14:26.494 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 04:14:26.494 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28383 150\n [Camera] 17-03-18 04:14:26.654 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:14:26.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:14:26.694 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:27.104 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:27.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:27.114 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:27.114 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:27.114 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:27.114 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:27.114 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:27.124 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 04:14:27.124 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:27.124 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) start. 17-03-18 04:14:27.304 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28383 802 17-03-18 04:14:27.454 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:27.494 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 04:14:27.494 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 04:14:27.494 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:27.494 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:27.494 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 04:14:27.494 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-18 04:14:27.494 -07 000000438 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:27.504 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:27.504 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 04:14:27.504 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-18 04:14:27.654 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:27.654 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:27.654 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:27.654 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:27.654 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 2370046456, 0x0, 391868352) start. 17-03-18 04:14:27.654 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:27.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:27.654 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:27.654 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:27.654 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start. 17-03-18 04:14:27.844 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:14:27.844 -07 000000590 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:27.844 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28383 150' command took 2 ms to send, 1344 ms to get response, and 1351 ms overall 17-03-18 04:14:27.844 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.129542 17-03-18 04:14:27.844 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.12954 mm 17-03-18 04:14:27.844 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:27.844 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True) 17-03-18 04:14:27.844 -07 000000512 INF: Y Motor: Moving to 70.7026 mm, started at 69.8628 mm, delta = 0.8398 mm 17-03-18 04:14:27.844 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:27.844 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 28298, sync = True, waitForSettling = False) 17-03-18 04:14:27.844 -07 000000437 INF: Z Motor: Moving to -0.129540 mm, started at -0.129131 mm, distance = -0.41 um 17-03-18 04:14:27.854 -07 000000437 INF: FPGA: Xmit ZDACW 28298\n [Z Motor] 17-03-18 04:14:27.854 -07 000000438 INF: FPGA: Recv YRDPOS 143079 17-03-18 04:14:27.854 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 04:14:27.854 -07 000000512 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:27.854 -07 000000512 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:27.854 -07 000000512 INF: Y Motor: Moving 1344 steps-20 17-03-18 04:14:27.854 -07 000000611 INF: FPGA: Recv ZDACW 17-03-18 04:14:27.864 -07 000000437 INF: FPGA: 'ZDACW 28298' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:27.864 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:27.864 -07 000000438 INF: FPGA: Recv ZDACR 28298 17-03-18 04:14:27.874 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:27.984 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:27.984 -07 000000437 INF: Z Motor: MoveAbsStepped took 134 ms (did NOT wait for settling yet)) 17-03-18 04:14:28.044 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 387 ms. 17-03-18 04:14:28.044 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 04:14:28.044 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:28.044 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 2370046456, 0x0, 391868352) end. Duration was 392 ms. 17-03-18 04:14:28.044 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-18 04:14:28.044 -07 000000479 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:28.054 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:28.054 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-18 04:14:28.054 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 04:14:28.054 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms. 17-03-18 04:14:28.244 -07 000000590 INF: FPGA: Recv YMVTILE 17-03-18 04:14:28.244 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 113 ms to send, 258 ms to get response, and 395 ms overall 17-03-18 04:14:28.294 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:28.294 -07 000000479 INF: FPGA: Recv YRDPOS 144769 17-03-18 04:14:28.304 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:14:28.304 -07 000000512 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:28.304 -07 000000512 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 04:14:28.304 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.840 mm, average velocity = 2.126 mm/sec 17-03-18 04:14:29.254 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:29.254 -07 000000585 INF: FPGA: Recv YRDPOS 144769 17-03-18 04:14:29.264 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:29.264 -07 000000512 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:29.284 -07 000000512 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:29.294 -07 000000512 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:14:29.294 -07 000000512 INF: Y Motor: Moved to 70.6880 after 1440 ms (table move) 17-03-18 04:14:29.294 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129540 mm (DAC = 28298) 17-03-18 04:14:29.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.294 -07 000000608 INF: FPGA: Recv ZSGSRD 29458 17-03-18 04:14:29.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:14:29.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.304 -07 000000618 INF: FPGA: Recv ZSGSRD 29461 17-03-18 04:14:29.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.314 -07 000000480 INF: FPGA: Recv ZSGSRD 29458 17-03-18 04:14:29.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.324 -07 000000611 INF: FPGA: Recv ZSGSRD 29460 17-03-18 04:14:29.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.334 -07 000000437 INF: FPGA: Recv ZSGSRD 29449 17-03-18 04:14:29.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.344 -07 000000479 INF: FPGA: Recv ZSGSRD 29451 17-03-18 04:14:29.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.354 -07 000000487 INF: FPGA: Recv ZSGSRD 29454 17-03-18 04:14:29.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.364 -07 000000590 INF: FPGA: Recv ZSGSRD 29445 17-03-18 04:14:29.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.374 -07 000000618 INF: FPGA: Recv ZSGSRD 29453 17-03-18 04:14:29.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.384 -07 000000012 INF: FPGA: Recv ZSGSRD 29458 17-03-18 04:14:29.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.394 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:29.394 -07 000000501 INF: FPGA: Recv ZPIEZORD 24925 17-03-18 04:14:29.404 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.404 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.318 V. Piezo Error = -9.9 V. 17-03-18 04:14:29.404 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.5 um, Read 10 ADC samples: Avg = 29455 (-128.8 uncal um), Error = 0.8 uncal um, Median = 29456 (-128.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29445 (-128.7 uncal um), Max = 29461 (-128.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-18 04:14:29.404 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29455, posNoise = 6, negNoise = 10 17-03-18 04:14:29.404 -07 000000610 INF: Z Motor: After move to -0.129540, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:29.404 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 108 ms (allowed 150 ms), total time = 1551 ms 17-03-18 04:14:29.404 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:29.454 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms 17-03-18 04:14:29.454 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:29.454 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.129548520646704. ---------- 17-03-18 04:14:29.454 -07 000000610 INF: Cycle 122 Tile 14 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:29.454 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28122, sync = True, waitForSettling = True) 17-03-18 04:14:29.454 -07 000000610 INF: Z Motor: Moving to -0.128734 mm, started at -0.129549 mm, distance = 0.81 um 17-03-18 04:14:29.454 -07 000000610 INF: FPGA: Xmit ZDACW 28122\n [Z Motor] 17-03-18 04:14:29.464 -07 000000438 INF: FPGA: Recv ZDACW 17-03-18 04:14:29.464 -07 000000610 INF: FPGA: 'ZDACW 28122' command took 0 ms to send, 2 ms to get response, and 5 ms overall 17-03-18 04:14:29.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:29.464 -07 000000480 INF: FPGA: Recv ZDACR 28122 17-03-18 04:14:29.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:14:29.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:29.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.624 -07 000000487 INF: FPGA: Recv ZSGSRD 29325 17-03-18 04:14:29.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.634 -07 000000590 INF: FPGA: Recv ZSGSRD 29340 17-03-18 04:14:29.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.644 -07 000000447 INF: FPGA: Recv ZSGSRD 29318 17-03-18 04:14:29.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.654 -07 000000585 INF: FPGA: Recv ZSGSRD 29331 17-03-18 04:14:29.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.664 -07 000000479 INF: FPGA: Recv ZSGSRD 29328 17-03-18 04:14:29.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.674 -07 000000444 INF: FPGA: Recv ZSGSRD 29327 17-03-18 04:14:29.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.684 -07 000000590 INF: FPGA: Recv ZSGSRD 29331 17-03-18 04:14:29.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.694 -07 000000626 INF: FPGA: Recv ZSGSRD 29326 17-03-18 04:14:29.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.704 -07 000000501 INF: FPGA: Recv ZSGSRD 29328 17-03-18 04:14:29.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:29.714 -07 000000608 INF: FPGA: Recv ZSGSRD 29330 17-03-18 04:14:29.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:29.724 -07 000000444 INF: FPGA: Recv ZPIEZORD 24790 17-03-18 04:14:29.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:29.734 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.291 V. Piezo Error = -10.0 V. 17-03-18 04:14:29.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.7 um, Read 10 ADC samples: Avg = 29328 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29328 (-128.0 uncal um), StdDev = 6 (0.0 uncal um), Range = 22 (0.1 uncal um), Min = 29318 (-127.9 uncal um), Max = 29340 (-128.0 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-18 04:14:29.734 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29328, posNoise = 12, negNoise = 10 17-03-18 04:14:29.734 -07 000000610 INF: Z Motor: After move to -0.128734, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:29.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 04:14:29.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:29.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:29.734 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:29.734 -07 000000479 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:29.734 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:29.734 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:29.734 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:29.734 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:29.734 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:14:29.734 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:29.734 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:29.734 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:29.744 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:14:29.744 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:29.744 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:14:29.744 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:29.754 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 04:14:29.754 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 04:14:29.754 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms. 17-03-18 04:14:29.754 -07 000000479 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 04:14:29.754 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28298 150\n [Camera] 17-03-18 04:14:29.954 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:30.364 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:30.374 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:30.374 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:30.374 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:30.374 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:30.374 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:30.374 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:30.374 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-18 04:14:30.374 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:30.374 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:14:30.564 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28298 805 17-03-18 04:14:30.714 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:30.754 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 375 ms. 17-03-18 04:14:30.754 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms. 17-03-18 04:14:30.754 -07 000000012 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:30.754 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 373 ms. 17-03-18 04:14:30.754 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms. 17-03-18 04:14:30.754 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:30.754 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-18 04:14:30.754 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 04:14:30.754 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-18 04:14:30.764 -07 000000479 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.989471, 17-03-18 04:14:30.764 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-18 04:14:30.914 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:30.914 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:30.914 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:30.914 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:30.914 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:30.914 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:30.914 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:30.914 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) start. 17-03-18 04:14:30.924 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:30.924 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2334624192, 0x0, 418435064) start. 17-03-18 04:14:31.104 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:14:31.104 -07 000000474 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:31.104 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28298 150' command took 2 ms to send, 1344 ms to get response, and 1351 ms overall 17-03-18 04:14:31.104 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.129395 17-03-18 04:14:31.104 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.12939 mm 17-03-18 04:14:31.104 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:31.104 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True) 17-03-18 04:14:31.104 -07 000000579 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm 17-03-18 04:14:31.104 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:31.104 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 28266, sync = True, waitForSettling = False) 17-03-18 04:14:31.104 -07 000000611 INF: Z Motor: Moving to -0.129393 mm, started at -0.128733 mm, distance = -0.66 um 17-03-18 04:14:31.114 -07 000000611 INF: FPGA: Xmit ZDACW 28266\n [Z Motor] 17-03-18 04:14:31.114 -07 000000455 INF: FPGA: Recv YRDPOS 144769 17-03-18 04:14:31.114 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-18 04:14:31.114 -07 000000579 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:31.114 -07 000000579 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:31.114 -07 000000579 INF: Y Motor: Moving 1351 steps-30 17-03-18 04:14:31.114 -07 000000437 INF: FPGA: Recv ZDACW 17-03-18 04:14:31.124 -07 000000611 INF: FPGA: 'ZDACW 28266' command took 2 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:31.124 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:31.124 -07 000000618 INF: FPGA: Recv ZDACR 28266 17-03-18 04:14:31.134 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:31.134 -07 000000611 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet)) 17-03-18 04:14:31.134 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:31.294 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 04:14:31.294 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 04:14:31.294 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:31.294 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:31.294 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 04:14:31.294 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2334624192, 0x0, 418435064) end. Duration was 374 ms. 17-03-18 04:14:31.304 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms. 17-03-18 04:14:31.304 -07 000000438 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:31.304 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:31.314 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-18 04:14:31.504 -07 000000618 INF: FPGA: Recv YMVTILE 17-03-18 04:14:31.504 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall 17-03-18 04:14:31.554 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:31.564 -07 000000487 INF: FPGA: Recv YRDPOS 146469 17-03-18 04:14:31.564 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 3 ms to get response, and 5 ms overall 17-03-18 04:14:31.564 -07 000000579 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:31.564 -07 000000579 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 04:14:31.564 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.845 mm, average velocity = 2.138 mm/sec 17-03-18 04:14:31.654 -07 000000437 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:14:31.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:14:32.514 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:32.514 -07 000000447 INF: FPGA: Recv YRDPOS 146470 17-03-18 04:14:32.524 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.524 -07 000000579 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:32.554 -07 000000579 INF: Y Motor: After move to 71.532608, error = -0.014053, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:32.554 -07 000000579 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 04:14:32.554 -07 000000579 INF: Y Motor: Moved to 71.5186 after 1440 ms (table move) 17-03-18 04:14:32.554 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129393 mm (DAC = 28266) 17-03-18 04:14:32.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.554 -07 000000438 INF: FPGA: Recv ZSGSRD 29434 17-03-18 04:14:32.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:14:32.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.564 -07 000000479 INF: FPGA: Recv ZSGSRD 29430 17-03-18 04:14:32.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.574 -07 000000625 INF: FPGA: Recv ZSGSRD 29440 17-03-18 04:14:32.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.584 -07 000000012 INF: FPGA: Recv ZSGSRD 29433 17-03-18 04:14:32.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.594 -07 000000579 INF: FPGA: Recv ZSGSRD 29433 17-03-18 04:14:32.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.604 -07 000000438 INF: FPGA: Recv ZSGSRD 29430 17-03-18 04:14:32.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.614 -07 000000626 INF: FPGA: Recv ZSGSRD 29428 17-03-18 04:14:32.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.624 -07 000000447 INF: FPGA: Recv ZSGSRD 29434 17-03-18 04:14:32.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.634 -07 000000455 INF: FPGA: Recv ZSGSRD 29430 17-03-18 04:14:32.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.644 -07 000000512 INF: FPGA: Recv ZSGSRD 29430 17-03-18 04:14:32.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:14:32.654 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:32.654 -07 000000438 INF: FPGA: Recv ZPIEZORD 24942 17-03-18 04:14:32.664 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.664 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.313 V. Piezo Error = -9.8 V. 17-03-18 04:14:32.664 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.4 um, Read 10 ADC samples: Avg = 29432 (-128.6 uncal um), Error = 0.8 uncal um, Median = 29432 (-128.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29428 (-128.6 uncal um), Max = 29440 (-128.7 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 04:14:32.664 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29432, posNoise = 8, negNoise = 4 17-03-18 04:14:32.664 -07 000000610 INF: Z Motor: After move to -0.129393, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:32.664 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 107 ms (allowed 150 ms), total time = 1550 ms 17-03-18 04:14:32.664 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:32.714 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms 17-03-18 04:14:32.714 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:32.714 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.5185546875, Z-position -0.129400763767444. ---------- 17-03-18 04:14:32.714 -07 000000610 INF: Cycle 122 Tile 15 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:32.714 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28090, sync = True, waitForSettling = True) 17-03-18 04:14:32.714 -07 000000610 INF: Z Motor: Moving to -0.128588 mm, started at -0.129401 mm, distance = 0.81 um 17-03-18 04:14:32.714 -07 000000610 INF: FPGA: Xmit ZDACW 28090\n [Z Motor] 17-03-18 04:14:32.714 -07 000000608 INF: FPGA: Recv ZDACW 17-03-18 04:14:32.724 -07 000000610 INF: FPGA: 'ZDACW 28090' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:32.724 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:32.724 -07 000000447 INF: FPGA: Recv ZDACR 28090 17-03-18 04:14:32.734 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.734 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:32.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.884 -07 000000444 INF: FPGA: Recv ZSGSRD 29313 17-03-18 04:14:32.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:32.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.894 -07 000000579 INF: FPGA: Recv ZSGSRD 29309 17-03-18 04:14:32.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.904 -07 000000625 INF: FPGA: Recv ZSGSRD 29310 17-03-18 04:14:32.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.914 -07 000000608 INF: FPGA: Recv ZSGSRD 29311 17-03-18 04:14:32.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.924 -07 000000447 INF: FPGA: Recv ZSGSRD 29305 17-03-18 04:14:32.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.934 -07 000000585 INF: FPGA: Recv ZSGSRD 29305 17-03-18 04:14:32.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.944 -07 000000455 INF: FPGA: Recv ZSGSRD 29305 17-03-18 04:14:32.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.954 -07 000000012 INF: FPGA: Recv ZSGSRD 29312 17-03-18 04:14:32.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.964 -07 000000512 INF: FPGA: Recv ZSGSRD 29301 17-03-18 04:14:32.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:32.974 -07 000000479 INF: FPGA: Recv ZSGSRD 29312 17-03-18 04:14:32.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.984 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:32.984 -07 000000590 INF: FPGA: Recv ZPIEZORD 24772 17-03-18 04:14:32.994 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:32.994 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.286 V. Piezo Error = -9.9 V. 17-03-18 04:14:32.994 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29308 (-127.8 uncal um), Error = 0.8 uncal um, Median = 29310 (-127.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29301 (-127.8 uncal um), Max = 29313 (-127.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:14:32.994 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29308, posNoise = 5, negNoise = 7 17-03-18 04:14:32.994 -07 000000610 INF: Z Motor: After move to -0.128588, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:32.994 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms) 17-03-18 04:14:32.994 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:32.994 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:32.994 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:32.994 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:32.994 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:32.994 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:32.994 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:32.994 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:32.994 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:32.994 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:32.994 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:14:32.994 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:33.004 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:14:33.004 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:33.004 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:14:33.004 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:33.014 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 04:14:33.014 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:14:33.014 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 04:14:33.014 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:14:33.014 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28266 150\n [Camera] 17-03-18 04:14:33.214 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:33.634 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:33.634 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:33.634 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:33.634 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:33.644 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:33.644 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:33.644 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:33.644 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 04:14:33.644 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:33.644 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 04:14:33.824 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28266 802 17-03-18 04:14:33.974 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:34.024 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 380 ms. 17-03-18 04:14:34.024 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms. 17-03-18 04:14:34.024 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:34.024 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:34.034 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 388 ms. 17-03-18 04:14:34.034 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-18 04:14:34.034 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:34.034 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 04:14:34.034 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:34.034 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-18 04:14:34.174 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:34.174 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:34.184 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:34.184 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:34.184 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start. 17-03-18 04:14:34.184 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:34.184 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:34.184 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:34.184 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:34.184 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start. 17-03-18 04:14:34.374 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:14:34.374 -07 000000455 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:34.374 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28266 150' command took 2 ms to send, 1341 ms to get response, and 1352 ms overall 17-03-18 04:14:34.374 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.128875 17-03-18 04:14:34.374 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.12888 mm 17-03-18 04:14:34.374 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:34.374 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True) 17-03-18 04:14:34.374 -07 000000626 INF: Y Motor: Moving to 72.3626 mm, started at 71.5186 mm, delta = 0.8441 mm 17-03-18 04:14:34.374 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:34.374 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 28153, sync = True, waitForSettling = False) 17-03-18 04:14:34.374 -07 000000579 INF: Z Motor: Moving to -0.128876 mm, started at -0.128604 mm, distance = -0.27 um 17-03-18 04:14:34.384 -07 000000579 INF: FPGA: Xmit ZDACW 28153\n [Z Motor] 17-03-18 04:14:34.384 -07 000000561 INF: FPGA: Recv YRDPOS 146470 17-03-18 04:14:34.384 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-18 04:14:34.384 -07 000000626 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:34.384 -07 000000626 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:34.384 -07 000000626 INF: Y Motor: Moving 1350 steps-30 17-03-18 04:14:34.384 -07 000000608 INF: FPGA: Recv ZDACW 17-03-18 04:14:34.394 -07 000000579 INF: FPGA: 'ZDACW 28153' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 04:14:34.394 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:34.394 -07 000000561 INF: FPGA: Recv ZDACR 28153 17-03-18 04:14:34.404 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:34.404 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:34.404 -07 000000579 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet)) 17-03-18 04:14:34.564 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 381 ms. 17-03-18 04:14:34.564 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms. 17-03-18 04:14:34.564 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:34.564 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 384 ms. 17-03-18 04:14:34.564 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 04:14:34.564 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:34.574 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:14:34.574 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 04:14:34.574 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 04:14:34.574 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-18 04:14:34.774 -07 000000501 INF: FPGA: Recv YMVTILE 17-03-18 04:14:34.774 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 391 ms overall 17-03-18 04:14:34.824 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:34.834 -07 000000447 INF: FPGA: Recv YRDPOS 148171 17-03-18 04:14:34.834 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-18 04:14:34.834 -07 000000626 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:34.834 -07 000000626 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm) 17-03-18 04:14:34.834 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 391 ms, distance = 0.844 mm, average velocity = 2.159 mm/sec 17-03-18 04:14:35.784 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:35.784 -07 000000437 INF: FPGA: Recv YRDPOS 148171 17-03-18 04:14:35.794 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:35.794 -07 000000626 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:35.824 -07 000000626 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:35.824 -07 000000626 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:14:35.824 -07 000000626 INF: Y Motor: Moved to 72.3491 after 1444 ms (table move) 17-03-18 04:14:35.824 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128876 mm (DAC = 28153) 17-03-18 04:14:35.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:35.824 -07 000000479 INF: FPGA: Recv ZSGSRD 29348 17-03-18 04:14:35.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:35.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:35.834 -07 000000626 INF: FPGA: Recv ZSGSRD 29351 17-03-18 04:14:35.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:35.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:35.844 -07 000000447 INF: FPGA: Recv ZSGSRD 29351 17-03-18 04:14:35.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:35.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:35.854 -07 000000437 INF: FPGA: Recv ZSGSRD 29355 17-03-18 04:14:35.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:35.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:35.864 -07 000000447 INF: FPGA: Recv ZSGSRD 29350 17-03-18 04:14:35.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:35.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:35.874 -07 000000438 INF: FPGA: Recv ZSGSRD 29349 17-03-18 04:14:35.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:35.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:35.884 -07 000000585 INF: FPGA: Recv ZSGSRD 29351 17-03-18 04:14:35.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:35.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:35.894 -07 000000579 INF: FPGA: Recv ZSGSRD 29348 17-03-18 04:14:35.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:35.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:35.904 -07 000000438 INF: FPGA: Recv ZSGSRD 29354 17-03-18 04:14:35.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:35.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:35.914 -07 000000012 INF: FPGA: Recv ZSGSRD 29347 17-03-18 04:14:35.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:35.924 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:35.924 -07 000000608 INF: FPGA: Recv ZPIEZORD 24865 17-03-18 04:14:35.934 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:35.934 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.296 V. Piezo Error = -9.8 V. 17-03-18 04:14:35.934 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.9 um, Read 10 ADC samples: Avg = 29350 (-128.1 uncal um), Error = 0.8 uncal um, Median = 29350 (-128.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29347 (-128.1 uncal um), Max = 29355 (-128.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 04:14:35.934 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29350, posNoise = 5, negNoise = 3 17-03-18 04:14:35.934 -07 000000610 INF: Z Motor: After move to -0.128876, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:35.934 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 106 ms (allowed 150 ms), total time = 1552 ms 17-03-18 04:14:35.934 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:35.984 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms 17-03-18 04:14:35.984 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:35.984 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.128873978371819. ---------- 17-03-18 04:14:35.984 -07 000000610 INF: Cycle 122 Tile 16 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:35.984 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27976, sync = True, waitForSettling = True) 17-03-18 04:14:35.984 -07 000000610 INF: Z Motor: Moving to -0.128066 mm, started at -0.128874 mm, distance = 0.81 um 17-03-18 04:14:35.984 -07 000000610 INF: FPGA: Xmit ZDACW 27976\n [Z Motor] 17-03-18 04:14:35.984 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 04:14:35.994 -07 000000610 INF: FPGA: 'ZDACW 27976' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:35.994 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:35.994 -07 000000585 INF: FPGA: Recv ZDACR 27976 17-03-18 04:14:36.004 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:36.004 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:36.124 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.981281, 17-03-18 04:14:36.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:36.154 -07 000000455 INF: FPGA: Recv ZSGSRD 29225 17-03-18 04:14:36.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:36.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:36.164 -07 000000012 INF: FPGA: Recv ZSGSRD 29220 17-03-18 04:14:36.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:36.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:36.184 -07 000000437 INF: FPGA: Recv ZSGSRD 29224 17-03-18 04:14:36.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:14:36.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:36.194 -07 000000438 INF: FPGA: Recv ZSGSRD 29224 17-03-18 04:14:36.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:36.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:36.204 -07 000000590 INF: FPGA: Recv ZSGSRD 29230 17-03-18 04:14:36.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:36.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:36.214 -07 000000437 INF: FPGA: Recv ZSGSRD 29227 17-03-18 04:14:36.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:36.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:36.224 -07 000000579 INF: FPGA: Recv ZSGSRD 29224 17-03-18 04:14:36.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:36.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:36.234 -07 000000474 INF: FPGA: Recv ZSGSRD 29227 17-03-18 04:14:36.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:36.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:36.244 -07 000000447 INF: FPGA: Recv ZSGSRD 29228 17-03-18 04:14:36.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:36.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:36.254 -07 000000474 INF: FPGA: Recv ZSGSRD 29229 17-03-18 04:14:36.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:36.264 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:36.264 -07 000000444 INF: FPGA: Recv ZPIEZORD 24679 17-03-18 04:14:36.274 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:36.274 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.269 V. Piezo Error = -10.0 V. 17-03-18 04:14:36.274 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.1 um, Read 10 ADC samples: Avg = 29226 (-127.3 uncal um), Error = 0.8 uncal um, Median = 29226 (-127.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29220 (-127.3 uncal um), Max = 29230 (-127.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 04:14:36.274 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29226, posNoise = 4, negNoise = 6 17-03-18 04:14:36.274 -07 000000610 INF: Z Motor: After move to -0.128066, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:36.274 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms) 17-03-18 04:14:36.274 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:36.274 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:36.274 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:36.274 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:36.274 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:36.274 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:36.274 -07 000000479 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:36.274 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:36.274 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:36.274 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:36.274 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:14:36.274 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:36.284 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:14:36.284 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:36.284 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:14:36.284 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:36.294 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 04:14:36.294 -07 000000479 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 04:14:36.294 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 04:14:36.294 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 04:14:36.304 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28153 150\n [Camera] 17-03-18 04:14:36.504 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:36.654 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:14:36.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:14:36.914 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:36.914 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:36.914 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:36.914 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:36.914 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start. 17-03-18 04:14:36.924 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:36.924 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:36.924 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:36.924 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:36.924 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start. 17-03-18 04:14:37.114 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28153 802 17-03-18 04:14:37.254 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:37.294 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 04:14:37.294 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 04:14:37.294 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:37.294 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 04:14:37.294 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 04:14:37.294 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:37.304 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:37.304 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 04:14:37.304 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:37.304 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 04:14:37.464 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:37.464 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:37.464 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:37.594 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:37.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:37.594 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:37.604 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:37.604 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-18 04:14:37.604 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:37.604 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:14:37.654 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:14:37.654 -07 000000012 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:37.654 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28153 150' command took 2 ms to send, 1342 ms to get response, and 1351 ms overall 17-03-18 04:14:37.654 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 04:14:37.654 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.34912109375, Z-Position -0.128077376066241. ------ 17-03-18 04:14:37.654 -07 000000447 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:14:37.654 -07 000000501 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.13466 mm 17-03-18 04:14:37.654 -07 000000501 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:37.664 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True) 17-03-18 04:14:37.664 -07 000000438 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm 17-03-18 04:14:37.664 -07 000000608 INF: Z Motor: Entering MoveAbsStepped (DAC = 29416, sync = True, waitForSettling = False) 17-03-18 04:14:37.664 -07 000000608 INF: Z Motor: Moving to -0.134658 mm, started at -0.128077 mm, distance = -6.58 um 17-03-18 04:14:37.664 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:37.664 -07 000000561 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:14:37.664 -07 000000447 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 4 ms to get response, and 6 ms overall 17-03-18 04:14:37.664 -07 000000487 INF: FPGA: Recv YRDPOS 148171 17-03-18 04:14:37.674 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:14:37.674 -07 000000608 INF: FPGA: Xmit ZDACW 29416\n [Z Motor] 17-03-18 04:14:37.674 -07 000000438 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:37.674 -07 000000438 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:37.674 -07 000000438 INF: Y Motor: Moving 1350 steps-28 17-03-18 04:14:37.674 -07 000000618 INF: FPGA: Recv ZDACW 17-03-18 04:14:37.684 -07 000000447 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 04:14:37.684 -07 000000608 INF: FPGA: 'ZDACW 29416' command took 0 ms to send, 0 ms to get response, and 16 ms overall 17-03-18 04:14:37.694 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:37.704 -07 000000608 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:37.704 -07 000000579 INF: FPGA: Recv ZDACR 29416 17-03-18 04:14:37.714 -07 000000608 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 26 ms overall 17-03-18 04:14:37.714 -07 000000608 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet)) 17-03-18 04:14:37.884 -07 000000626 INF: FPGA: Recv FOCMRRFOC 17-03-18 04:14:37.884 -07 000000447 INF: FPGA: 'FOCMRRFOC' command took 3 ms to send, 195 ms to get response, and 220 ms overall 17-03-18 04:14:37.974 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 04:14:37.984 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 04:14:37.984 -07 000000585 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:37.984 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 378 ms. 17-03-18 04:14:37.984 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms. 17-03-18 04:14:37.984 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:37.984 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:37.984 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:37.984 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 524 ms. 17-03-18 04:14:37.994 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-18 04:14:38.064 -07 000000618 INF: FPGA: Recv YMVTILE 17-03-18 04:14:38.064 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 04:14:38.124 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:38.124 -07 000000579 INF: FPGA: Recv YRDPOS 149864 17-03-18 04:14:38.134 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:38.134 -07 000000438 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:38.134 -07 000000438 INF: Y Motor: Position error before settling (table move) = -34 encoder counts (-0.017 mm) 17-03-18 04:14:38.134 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.125 mm/sec 17-03-18 04:14:39.084 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:39.084 -07 000000444 INF: FPGA: Recv YRDPOS 149864 17-03-18 04:14:39.094 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:39.094 -07 000000438 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:39.114 -07 000000438 INF: Y Motor: After move to 73.192604, error = -0.016823, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:39.114 -07 000000438 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:14:39.114 -07 000000438 INF: Y Motor: Moved to 73.1758 after 1457 ms (table move) 17-03-18 04:14:39.124 -07 000000501 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134658 mm (DAC = 29416) 17-03-18 04:14:39.124 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:39.124 -07 000000608 INF: FPGA: Recv ZSGSRD 30256 17-03-18 04:14:39.134 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:14:39.134 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:39.134 -07 000000585 INF: FPGA: Recv ZSGSRD 30253 17-03-18 04:14:39.144 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:39.144 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:39.144 -07 000000626 INF: FPGA: Recv ZSGSRD 30257 17-03-18 04:14:39.154 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:39.154 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:39.154 -07 000000474 INF: FPGA: Recv ZSGSRD 30249 17-03-18 04:14:39.164 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:39.164 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:39.164 -07 000000479 INF: FPGA: Recv ZSGSRD 30252 17-03-18 04:14:39.174 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:39.174 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:39.174 -07 000000480 INF: FPGA: Recv ZSGSRD 30249 17-03-18 04:14:39.184 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:39.184 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:39.184 -07 000000487 INF: FPGA: Recv ZSGSRD 30244 17-03-18 04:14:39.194 -07 000000501 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:39.194 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:39.194 -07 000000618 INF: FPGA: Recv ZSGSRD 30251 17-03-18 04:14:39.204 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:39.204 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:39.204 -07 000000479 INF: FPGA: Recv ZSGSRD 30245 17-03-18 04:14:39.214 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:39.214 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:39.214 -07 000000585 INF: FPGA: Recv ZSGSRD 30259 17-03-18 04:14:39.224 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:39.224 -07 000000501 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:39.224 -07 000000438 INF: FPGA: Recv ZPIEZORD 26028 17-03-18 04:14:39.234 -07 000000501 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:39.234 -07 000000501 INF: Z Motor: Piezo is near 35.6 V (nominally 0 to 100 V), expect near 44.9 V, since DAC is at 4.489 V. Piezo Error = -9.3 V. 17-03-18 04:14:39.234 -07 000000501 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.7 um, Read 10 ADC samples: Avg = 30252 (-133.9 uncal um), Error = 0.8 uncal um, Median = 30252 (-133.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30244 (-133.8 uncal um), Max = 30259 (-133.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 04:14:39.234 -07 000000501 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30252, posNoise = 7, negNoise = 8 17-03-18 04:14:39.234 -07 000000501 INF: Z Motor: After move to -0.134658, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:39.234 -07 000000501 INF: Z Motor: Settle wait time = 1460 ms, measure time = 107 ms (allowed 150 ms), total time = 1567 ms 17-03-18 04:14:39.234 -07 000000501 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:39.284 -07 000000501 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1621 ms 17-03-18 04:14:39.284 -07 000000501 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:39.284 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:39.284 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:39.284 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:39.284 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:39.284 -07 000000474 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 04:14:39.284 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:39.284 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:39.284 -07 000000474 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 04:14:39.294 -07 000000474 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 04:14:39.294 -07 000000474 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 04:14:39.294 -07 000000474 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms. 17-03-18 04:14:39.294 -07 000000474 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms. 17-03-18 04:14:39.294 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 04:14:39.344 -07 000000487 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 04:14:39.644 -07 000000625 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 04:14:39.644 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 04:14:39.644 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 04:14:39.644 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2281705520, 0x0, 559484976) start. 17-03-18 04:14:39.684 -07 000000437 INF: FPGA: Recv @CAMSNAP 380 17-03-18 04:14:39.684 -07 000000447 INF: FPGA: Recv CAMSNAP 17-03-18 04:14:39.684 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 374 ms to get response, and 384 ms overall 17-03-18 04:14:39.774 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2281705520, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 04:14:39.774 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:39.774 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 04:14:39.774 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms. 17-03-18 04:14:39.784 -07 000000590 INF: Autofocus start 17-03-18 04:14:39.784 -07 000000590 INF: MeasureProfile start 17-03-18 04:14:39.784 -07 000000474 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 04:14:39.784 -07 000000455 INF: FPGA: Recv FOCMRRCUR 17-03-18 04:14:39.794 -07 000000474 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 04:14:39.794 -07 000000474 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 04:14:39.794 -07 000000590 INF: MeasureProfile done 17-03-18 04:14:39.794 -07 000000590 INF: X=48 Z correction [um]=0.2069503 17-03-18 04:14:39.794 -07 000000590 INF: Autofocus finished 17-03-18 04:14:39.994 -07 000000438 INF: FPGA: Recv FOCMRRIMG 17-03-18 04:14:39.994 -07 000000474 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 04:14:39.994 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17578125, Z-position -0.134668617723687. ---------- 17-03-18 04:14:39.994 -07 000000610 INF: Cycle 122 Tile 17 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:39.994 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27974, sync = True, waitForSettling = True) 17-03-18 04:14:40.004 -07 000000610 INF: Z Motor: Moving to -0.128057 mm, started at -0.134669 mm, distance = 6.61 um 17-03-18 04:14:40.004 -07 000000610 INF: FPGA: Xmit ZDACW 27974\n [Z Motor] 17-03-18 04:14:40.004 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 04:14:40.014 -07 000000610 INF: FPGA: 'ZDACW 27974' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:40.014 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:40.014 -07 000000585 INF: FPGA: Recv ZDACR 27974 17-03-18 04:14:40.024 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.024 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:40.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:40.174 -07 000000487 INF: FPGA: Recv ZSGSRD 29227 17-03-18 04:14:40.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:40.184 -07 000000480 INF: FPGA: Recv ZSGSRD 29230 17-03-18 04:14:40.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:40.194 -07 000000512 INF: FPGA: Recv ZSGSRD 29220 17-03-18 04:14:40.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:40.204 -07 000000447 INF: FPGA: Recv ZSGSRD 29222 17-03-18 04:14:40.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:40.214 -07 000000501 INF: FPGA: Recv ZSGSRD 29231 17-03-18 04:14:40.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:40.224 -07 000000487 INF: FPGA: Recv ZSGSRD 29228 17-03-18 04:14:40.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:40.234 -07 000000579 INF: FPGA: Recv ZSGSRD 29225 17-03-18 04:14:40.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:40.244 -07 000000512 INF: FPGA: Recv ZSGSRD 29221 17-03-18 04:14:40.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:40.254 -07 000000561 INF: FPGA: Recv ZSGSRD 29225 17-03-18 04:14:40.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:40.264 -07 000000501 INF: FPGA: Recv ZSGSRD 29222 17-03-18 04:14:40.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.274 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:40.274 -07 000000608 INF: FPGA: Recv ZPIEZORD 24672 17-03-18 04:14:40.284 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:40.284 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.269 V. Piezo Error = -10.0 V. 17-03-18 04:14:40.284 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.1 um, Read 10 ADC samples: Avg = 29225 (-127.3 uncal um), Error = 0.8 uncal um, Median = 29225 (-127.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29220 (-127.3 uncal um), Max = 29231 (-127.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:14:40.284 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29225, posNoise = 6, negNoise = 5 17-03-18 04:14:40.284 -07 000000610 INF: Z Motor: After move to -0.128057, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:40.284 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-18 04:14:40.284 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:40.284 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:40.284 -07 000000479 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:40.284 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:40.284 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:40.284 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:40.284 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:40.284 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:40.284 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 04:14:40.284 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:40.284 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 04:14:40.284 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:40.294 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:14:40.294 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:40.294 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 04:14:40.294 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:40.304 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 04:14:40.304 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 17 ms. 17-03-18 04:14:40.304 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms. 17-03-18 04:14:40.304 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms. 17-03-18 04:14:40.304 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 28151 150\n [Camera] 17-03-18 04:14:40.504 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:40.924 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:40.924 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:40.924 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:40.924 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:40.924 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) start. 17-03-18 04:14:40.924 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:40.924 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:40.924 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:40.924 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:40.924 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2334624192, 0x0, 418435064) start. 17-03-18 04:14:41.114 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28151 802 17-03-18 04:14:41.264 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning grn on 954 17-03-18 04:14:41.294 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2334624192, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 04:14:41.294 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-18 04:14:41.294 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:41.304 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:41.304 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2299201928, 0x0, 391868352) end. Duration was 384 ms. 17-03-18 04:14:41.304 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 04:14:41.304 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:41.424 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-18 04:14:41.424 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 119 ms. 17-03-18 04:14:41.424 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 505 ms. 17-03-18 04:14:41.464 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154 17-03-18 04:14:41.464 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154 17-03-18 04:14:41.464 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:41.474 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154 17-03-18 04:14:41.474 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154 17-03-18 04:14:41.474 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:41.474 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:41.474 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-18 04:14:41.474 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:41.474 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 04:14:41.504 -07 000000585 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 4.003063, 17-03-18 04:14:41.654 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:14:41.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:14:41.654 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:14:41.654 -07 000000447 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:41.654 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 28151 150' command took 2 ms to send, 1347 ms to get response, and 1352 ms overall 17-03-18 04:14:41.654 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.127934 17-03-18 04:14:41.654 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12793 mm 17-03-18 04:14:41.664 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:41.664 -07 000000585 INF: Z Motor: Entering MoveAbsStepped (DAC = 27947, sync = True, waitForSettling = False) 17-03-18 04:14:41.664 -07 000000585 INF: Z Motor: Moving to -0.127933 mm, started at -0.128071 mm, distance = 0.14 um 17-03-18 04:14:41.664 -07 000000585 INF: FPGA: Xmit ZDACW 27947\n [Z Motor] 17-03-18 04:14:41.664 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True) 17-03-18 04:14:41.664 -07 000000608 INF: Y Motor: Moving to 74.0226 mm, started at 73.1758 mm, delta = 0.8468 mm 17-03-18 04:14:41.664 -07 000000512 INF: FPGA: Recv ZDACW 17-03-18 04:14:41.674 -07 000000585 INF: FPGA: 'ZDACW 27947' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 04:14:41.674 -07 000000585 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:41.674 -07 000000579 INF: FPGA: Recv ZDACR 27947 17-03-18 04:14:41.684 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:41.684 -07 000000585 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:41.684 -07 000000585 INF: Z Motor: MoveAbsStepped took 18 ms (did NOT wait for settling yet)) 17-03-18 04:14:41.684 -07 000000455 INF: FPGA: Recv YRDPOS 149864 17-03-18 04:14:41.694 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall 17-03-18 04:14:41.694 -07 000000608 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:41.694 -07 000000608 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:41.694 -07 000000608 INF: Y Motor: Moving 1355 steps-34 17-03-18 04:14:41.694 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:41.854 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 374 ms. 17-03-18 04:14:41.854 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 04:14:41.854 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:41.854 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 378 ms. 17-03-18 04:14:41.854 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-18 04:14:41.854 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:41.854 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:41.864 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:41.864 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 04:14:41.864 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-18 04:14:42.064 -07 000000438 INF: FPGA: Recv YMVTILE 17-03-18 04:14:42.064 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall 17-03-18 04:14:42.114 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:42.114 -07 000000501 INF: FPGA: Recv YRDPOS 151568 17-03-18 04:14:42.124 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:42.124 -07 000000608 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:42.124 -07 000000608 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 04:14:42.124 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.847 mm, average velocity = 2.240 mm/sec 17-03-18 04:14:43.074 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:43.074 -07 000000455 INF: FPGA: Recv YRDPOS 151568 17-03-18 04:14:43.084 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.084 -07 000000608 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:43.104 -07 000000608 INF: Y Motor: After move to 74.022606, error = -0.014793, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:43.104 -07 000000608 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:14:43.104 -07 000000608 INF: Y Motor: Moved to 74.0078 after 1440 ms (table move) 17-03-18 04:14:43.104 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.127933 mm (DAC = 27947) 17-03-18 04:14:43.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.104 -07 000000012 INF: FPGA: Recv ZSGSRD 29198 17-03-18 04:14:43.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:14:43.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.114 -07 000000608 INF: FPGA: Recv ZSGSRD 29217 17-03-18 04:14:43.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.124 -07 000000501 INF: FPGA: Recv ZSGSRD 29210 17-03-18 04:14:43.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.134 -07 000000590 INF: FPGA: Recv ZSGSRD 29209 17-03-18 04:14:43.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.144 -07 000000585 INF: FPGA: Recv ZSGSRD 29203 17-03-18 04:14:43.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.154 -07 000000012 INF: FPGA: Recv ZSGSRD 29202 17-03-18 04:14:43.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.164 -07 000000608 INF: FPGA: Recv ZSGSRD 29203 17-03-18 04:14:43.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.174 -07 000000626 INF: FPGA: Recv ZSGSRD 29198 17-03-18 04:14:43.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.184 -07 000000579 INF: FPGA: Recv ZSGSRD 29203 17-03-18 04:14:43.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.194 -07 000000585 INF: FPGA: Recv ZSGSRD 29209 17-03-18 04:14:43.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.204 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:43.204 -07 000000012 INF: FPGA: Recv ZPIEZORD 24670 17-03-18 04:14:43.214 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.214 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.264 V. Piezo Error = -9.9 V. 17-03-18 04:14:43.214 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.9 um, Read 10 ADC samples: Avg = 29205 (-127.2 uncal um), Error = 0.8 uncal um, Median = 29203 (-127.2 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 29198 (-127.1 uncal um), Max = 29217 (-127.2 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:14:43.214 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29205, posNoise = 12, negNoise = 7 17-03-18 04:14:43.214 -07 000000610 INF: Z Motor: After move to -0.127933, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:43.214 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 104 ms (allowed 150 ms), total time = 1548 ms 17-03-18 04:14:43.214 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:43.264 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms 17-03-18 04:14:43.264 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:43.264 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0078125, Z-position -0.127942467611264. ---------- 17-03-18 04:14:43.264 -07 000000610 INF: Cycle 122 Tile 18 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:43.264 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27771, sync = True, waitForSettling = True) 17-03-18 04:14:43.264 -07 000000610 INF: Z Motor: Moving to -0.127127 mm, started at -0.127942 mm, distance = 0.81 um 17-03-18 04:14:43.264 -07 000000610 INF: FPGA: Xmit ZDACW 27771\n [Z Motor] 17-03-18 04:14:43.264 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 04:14:43.274 -07 000000610 INF: FPGA: 'ZDACW 27771' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 04:14:43.274 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:43.274 -07 000000437 INF: FPGA: Recv ZDACR 27771 17-03-18 04:14:43.284 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.284 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:43.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.434 -07 000000480 INF: FPGA: Recv ZSGSRD 29079 17-03-18 04:14:43.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:43.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.444 -07 000000585 INF: FPGA: Recv ZSGSRD 29078 17-03-18 04:14:43.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 04:14:43.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.454 -07 000000561 INF: FPGA: Recv ZSGSRD 29079 17-03-18 04:14:43.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.464 -07 000000585 INF: FPGA: Recv ZSGSRD 29074 17-03-18 04:14:43.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.474 -07 000000012 INF: FPGA: Recv ZSGSRD 29074 17-03-18 04:14:43.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.484 -07 000000487 INF: FPGA: Recv ZSGSRD 29079 17-03-18 04:14:43.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.494 -07 000000447 INF: FPGA: Recv ZSGSRD 29075 17-03-18 04:14:43.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.504 -07 000000474 INF: FPGA: Recv ZSGSRD 29079 17-03-18 04:14:43.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.514 -07 000000479 INF: FPGA: Recv ZSGSRD 29077 17-03-18 04:14:43.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:43.524 -07 000000585 INF: FPGA: Recv ZSGSRD 29076 17-03-18 04:14:43.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.534 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:43.534 -07 000000608 INF: FPGA: Recv ZPIEZORD 24512 17-03-18 04:14:43.544 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:43.544 -07 000000610 INF: Z Motor: Piezo is near 32.4 V (nominally 0 to 100 V), expect near 42.4 V, since DAC is at 4.238 V. Piezo Error = -10.0 V. 17-03-18 04:14:43.544 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.1 um, Read 10 ADC samples: Avg = 29077 (-126.3 uncal um), Error = 0.8 uncal um, Median = 29078 (-126.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 29074 (-126.3 uncal um), Max = 29079 (-126.4 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 04:14:43.544 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29077, posNoise = 2, negNoise = 3 17-03-18 04:14:43.544 -07 000000610 INF: Z Motor: After move to -0.127127, error = 0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:43.544 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 04:14:43.544 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:43.544 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:43.544 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:43.544 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:43.544 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:43.544 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:43.544 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:43.544 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:43.544 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:14:43.544 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:43.544 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 04:14:43.544 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:43.554 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:14:43.554 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:43.554 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 04:14:43.554 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:43.564 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 04:14:43.564 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 04:14:43.564 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms. 17-03-18 04:14:43.564 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 04:14:43.564 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 27947 150\n [Camera] 17-03-18 04:14:43.764 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:44.184 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:44.184 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:44.184 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:44.184 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:44.184 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) start. 17-03-18 04:14:44.184 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:44.184 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:44.184 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:44.184 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:44.184 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) start. 17-03-18 04:14:44.374 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27947 802 17-03-18 04:14:44.524 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 952 17-03-18 04:14:44.564 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2334624192, 0x0, 391868352) end. Duration was 381 ms. 17-03-18 04:14:44.564 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 04:14:44.564 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:44.564 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:44.564 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 04:14:44.564 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2370046456, 0x0, 418435064) end. Duration was 384 ms. 17-03-18 04:14:44.564 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms. 17-03-18 04:14:44.564 -07 000000611 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:44.574 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:44.584 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-18 04:14:44.724 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1152 17-03-18 04:14:44.724 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1152 17-03-18 04:14:44.724 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:44.724 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:44.724 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 04:14:44.724 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1152 17-03-18 04:14:44.724 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1152 17-03-18 04:14:44.724 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:44.724 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:44.724 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) start. 17-03-18 04:14:44.914 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1344 17-03-18 04:14:44.914 -07 000000474 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:44.914 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 27947 150' command took 2 ms to send, 1344 ms to get response, and 1351 ms overall 17-03-18 04:14:44.914 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.127445 17-03-18 04:14:44.914 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12745 mm 17-03-18 04:14:44.914 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 04:14:44.914 -07 000000479 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True) 17-03-18 04:14:44.914 -07 000000479 INF: Y Motor: Moving to 74.8526 mm, started at 74.0078 mm, delta = 0.8448 mm 17-03-18 04:14:44.914 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:44.924 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 27840, sync = True, waitForSettling = False) 17-03-18 04:14:44.924 -07 000000501 INF: Z Motor: Moving to -0.127443 mm, started at -0.127120 mm, distance = -0.32 um 17-03-18 04:14:44.924 -07 000000447 INF: FPGA: Recv YRDPOS 151568 17-03-18 04:14:44.934 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:44.934 -07 000000479 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:44.934 -07 000000479 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 04:14:44.934 -07 000000479 INF: Y Motor: Moving 1352 steps-30 17-03-18 04:14:44.934 -07 000000501 INF: FPGA: Xmit ZDACW 27840\n [Z Motor] 17-03-18 04:14:44.934 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 04:14:44.944 -07 000000501 INF: FPGA: 'ZDACW 27840' command took 1 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 04:14:44.944 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:44.944 -07 000000474 INF: FPGA: Recv ZDACR 27840 17-03-18 04:14:44.954 -07 000000479 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 04:14:44.954 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:44.954 -07 000000501 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet)) 17-03-18 04:14:45.114 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 392 ms. 17-03-18 04:14:45.114 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 04:14:45.114 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:45.114 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) end. Duration was 389 ms. 17-03-18 04:14:45.114 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 04:14:45.114 -07 000000611 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:45.124 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:45.124 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 04:14:45.124 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:45.124 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-18 04:14:45.324 -07 000000012 INF: FPGA: Recv YMVTILE 17-03-18 04:14:45.324 -07 000000479 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 04:14:45.354 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:45.364 -07 000000579 INF: FPGA: Recv YRDPOS 153254 17-03-18 04:14:45.364 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 04:14:45.364 -07 000000479 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:45.364 -07 000000479 INF: Y Motor: Position error before settling (table move) = -44 encoder counts (-0.021 mm) 17-03-18 04:14:45.364 -07 000000479 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.128 mm/sec 17-03-18 04:14:46.314 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 04:14:46.314 -07 000000512 INF: FPGA: Recv YRDPOS 153254 17-03-18 04:14:46.324 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:46.324 -07 000000479 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 04:14:46.344 -07 000000479 INF: Y Motor: After move to 74.852608, error = -0.021553, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 04:14:46.344 -07 000000479 INF: Y Motor: Position error after settling (table move) = -44 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 04:14:46.344 -07 000000479 INF: Y Motor: Moved to 74.8311 after 1421 ms (table move) 17-03-18 04:14:46.344 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.127443 mm (DAC = 27840) 17-03-18 04:14:46.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.344 -07 000000579 INF: FPGA: Recv ZSGSRD 29135 17-03-18 04:14:46.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:46.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.354 -07 000000479 INF: FPGA: Recv ZSGSRD 29125 17-03-18 04:14:46.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.364 -07 000000487 INF: FPGA: Recv ZSGSRD 29128 17-03-18 04:14:46.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.374 -07 000000437 INF: FPGA: Recv ZSGSRD 29124 17-03-18 04:14:46.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.384 -07 000000625 INF: FPGA: Recv ZSGSRD 29121 17-03-18 04:14:46.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.394 -07 000000480 INF: FPGA: Recv ZSGSRD 29130 17-03-18 04:14:46.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.404 -07 000000626 INF: FPGA: Recv ZSGSRD 29133 17-03-18 04:14:46.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.414 -07 000000474 INF: FPGA: Recv ZSGSRD 29132 17-03-18 04:14:46.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.424 -07 000000437 INF: FPGA: Recv ZSGSRD 29127 17-03-18 04:14:46.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.434 -07 000000012 INF: FPGA: Recv ZSGSRD 29123 17-03-18 04:14:46.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.444 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:46.444 -07 000000479 INF: FPGA: Recv ZPIEZORD 24615 17-03-18 04:14:46.454 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.454 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.248 V. Piezo Error = -9.9 V. 17-03-18 04:14:46.454 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.4 um, Read 10 ADC samples: Avg = 29128 (-126.7 uncal um), Error = 0.8 uncal um, Median = 29128 (-126.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29121 (-126.6 uncal um), Max = 29135 (-126.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 04:14:46.454 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29128, posNoise = 7, negNoise = 7 17-03-18 04:14:46.454 -07 000000610 INF: Z Motor: After move to -0.127443, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:46.454 -07 000000610 INF: Z Motor: Settle wait time = 1424 ms, measure time = 105 ms (allowed 150 ms), total time = 1529 ms 17-03-18 04:14:46.454 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-18 04:14:46.504 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1582 ms 17-03-18 04:14:46.504 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 04:14:46.504 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.8310546875, Z-position -0.127447803276348. ---------- 17-03-18 04:14:46.504 -07 000000610 INF: Cycle 122 Tile 19 Exposure Settings A 417 G 200 T 200 C 417 17-03-18 04:14:46.504 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27664, sync = True, waitForSettling = True) 17-03-18 04:14:46.504 -07 000000610 INF: Z Motor: Moving to -0.126638 mm, started at -0.127448 mm, distance = 0.81 um 17-03-18 04:14:46.504 -07 000000610 INF: FPGA: Xmit ZDACW 27664\n [Z Motor] 17-03-18 04:14:46.504 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 04:14:46.514 -07 000000610 INF: FPGA: 'ZDACW 27664' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:46.514 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 04:14:46.514 -07 000000455 INF: FPGA: Recv ZDACR 27664 17-03-18 04:14:46.524 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.524 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 04:14:46.654 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 04:14:46.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 121. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval. 17-03-18 04:14:46.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.674 -07 000000447 INF: FPGA: Recv ZSGSRD 29002 17-03-18 04:14:46.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 04:14:46.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.684 -07 000000512 INF: FPGA: Recv ZSGSRD 29007 17-03-18 04:14:46.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.694 -07 000000608 INF: FPGA: Recv ZSGSRD 29002 17-03-18 04:14:46.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.704 -07 000000480 INF: FPGA: Recv ZSGSRD 28998 17-03-18 04:14:46.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.714 -07 000000455 INF: FPGA: Recv ZSGSRD 29003 17-03-18 04:14:46.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.724 -07 000000447 INF: FPGA: Recv ZSGSRD 29010 17-03-18 04:14:46.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.734 -07 000000438 INF: FPGA: Recv ZSGSRD 29006 17-03-18 04:14:46.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.744 -07 000000579 INF: FPGA: Recv ZSGSRD 28998 17-03-18 04:14:46.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.754 -07 000000512 INF: FPGA: Recv ZSGSRD 29003 17-03-18 04:14:46.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 04:14:46.764 -07 000000625 INF: FPGA: Recv ZSGSRD 29001 17-03-18 04:14:46.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.774 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 04:14:46.774 -07 000000626 INF: FPGA: Recv ZPIEZORD 24423 17-03-18 04:14:46.784 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 04:14:46.784 -07 000000610 INF: Z Motor: Piezo is near 32.2 V (nominally 0 to 100 V), expect near 42.2 V, since DAC is at 4.221 V. Piezo Error = -10.0 V. 17-03-18 04:14:46.784 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.6 um, Read 10 ADC samples: Avg = 29003 (-125.9 uncal um), Error = 0.8 uncal um, Median = 29002 (-125.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 28998 (-125.8 uncal um), Max = 29010 (-125.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 04:14:46.784 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29003, posNoise = 7, negNoise = 5 17-03-18 04:14:46.784 -07 000000610 INF: Z Motor: After move to -0.126638, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 04:14:46.784 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 04:14:46.784 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 04:14:46.784 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 04:14:46.784 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 04:14:46.784 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 04:14:46.784 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 04:14:46.784 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 04:14:46.784 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 04:14:46.784 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 04:14:46.784 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 04:14:46.784 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 04:14:46.784 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 04:14:46.784 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 04:14:46.794 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 04:14:46.794 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 04:14:46.794 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 04:14:46.794 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 04:14:46.804 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-18 04:14:46.804 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:14:46.804 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-18 04:14:46.804 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 04:14:46.804 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 417 417 200 200 27840 150\n [Camera] 17-03-18 04:14:46.864 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.993549, 17-03-18 04:14:47.004 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 04:14:47.424 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 609 17-03-18 04:14:47.424 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 609 17-03-18 04:14:47.424 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:47.424 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:47.424 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start. 17-03-18 04:14:47.424 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 609 17-03-18 04:14:47.424 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 609 17-03-18 04:14:47.424 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:47.424 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:47.424 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start. 17-03-18 04:14:47.614 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27840 802 17-03-18 04:14:47.764 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning grn on 954 17-03-18 04:14:47.804 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 371 ms. 17-03-18 04:14:47.804 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 04:14:47.804 -07 000000479 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:47.804 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 04:14:47.804 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-18 04:14:47.804 -07 000000590 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:47.804 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:47.804 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 04:14:47.804 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 04:14:47.814 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms. 17-03-18 04:14:47.964 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154 17-03-18 04:14:47.974 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154 17-03-18 04:14:47.974 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 04:14:47.974 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 04:14:47.974 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start. 17-03-18 04:14:47.974 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154 17-03-18 04:14:47.974 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154 17-03-18 04:14:47.974 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 04:14:48.104 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 04:14:48.104 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start. 17-03-18 04:14:48.154 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1345 17-03-18 04:14:48.154 -07 000000487 INF: FPGA: Recv CAMDBLSNAP 17-03-18 04:14:48.154 -07 000000610 INF: FPGA: 'CAMDBLSNAP 417 417 200 200 27840 150' command took 2 ms to send, 1339 ms to get response, and 1351 ms overall 17-03-18 04:14:48.364 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 393 ms. 17-03-18 04:14:48.364 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms. 17-03-18 04:14:48.364 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:48.364 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:48.364 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 04:14:48.364 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start. 17-03-18 04:14:48.414 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms. 17-03-18 04:14:48.494 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 384 ms. 17-03-18 04:14:48.494 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms. 17-03-18 04:14:48.494 -07 000000479 INF: Camera: CopyActivePixFullImage start. 17-03-18 04:14:48.494 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 04:14:48.504 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 527 ms. 17-03-18 04:14:48.504 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start. 17-03-18 04:14:48.544 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms. 17-03-18 04:14:48.564 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles. 17-03-18 04:14:48.564 -07 000000610 INF: Imaging Cycle 122: ScanTilesCommand Cycle 122 time end. Duration was 141112 ms. 17-03-18 04:14:48.564 -07 000000610 INF: =================== Cycle #122 =================== 17-03-18 04:14:48.564 -07 000000610 INF: =================== =================== 17-03-18 04:14:48.564 -07 000000608 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED] 17-03-18 04:14:48.564 -07 000000618 INF: FPGA: Recv EXLED1ADCR 25 17-03-18 04:14:48.574 -07 000000608 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 04:14:48.574 -07 000000608 INF: GreenLED: Using Green data: Photodiode ADC 25 --> 0.0 mW (old method), or 1.8 mW (new method). Difference = 1.8 mW 17-03-18 04:14:48.574 -07 000000608 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 122, FrontChillerTemperature: 3.993549, FrontChillerHeatSinkTemperature: 0.493089, AmbientTemperature: 18.6308, FlowCellCompartmentTemperature: 21.9809, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.46954, GreenLEDSensorTemperature: 25.5575, PhotodiodePowerAdcGreen: 25, PhotodiodePowerMwGreen: 1.835864 17-03-18 04:14:48.684 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.