17-03-18 04:14:48.734 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:14:48.744 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-18 04:14:48.744 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8311 mm, delta = 0.5495 mm
17-03-18 04:14:48.744 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:14:48.744 -07 000000447 INF: FPGA: Recv YRDPOS 153254
17-03-18 04:14:48.754 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:14:48.754 -07 000000610 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:14:48.754 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-18 04:14:48.754 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-18 04:14:48.754 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-18 04:14:48.864 -07 000000444 INF: FPGA: Recv YMVTO 154379 879
17-03-18 04:14:48.864 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 108 ms to get response, and 118 ms overall
17-03-18 04:14:48.864 -07 000000610 INF: Y Motor: Position error before settling = 0 encoder counts (0.000 mm)
17-03-18 04:14:48.864 -07 000000610 INF: Y Motor: To move from 74.831 to 75.381 (0.550 mm) should take 879 steps, but required 879 steps (0.549 mm). Slippage = 0.000 mm (0.00%).
17-03-18 04:14:48.864 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 118 ms, distance = 0.550 mm, average velocity = 4.657 mm/sec
17-03-18 04:14:51.654 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:14:51.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1732, R2=1799, Total=3531. Warn if over 250 bubbles per interval.
17-03-18 04:14:51.864 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:14:51.864 -07 000000474 INF: FPGA: Recv YRDPOS 154387
17-03-18 04:14:51.874 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:14:51.874 -07 000000610 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:14:51.894 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.003697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:14:51.894 -07 000000610 INF: Y Motor: Position error after settling = 8 encoder counts (0.004 mm), Delta during settling = 8 counts (0.004 mm)
17-03-18 04:14:51.894 -07 000000610 INF: Y Motor: Moved to 75.3843 after 3149 ms
17-03-18 04:14:51.894 -07 000000610 INF: =================== Cycle #123, Flow Cell Temp 60° ===================
17-03-18 04:14:51.894 -07 000000610 INF: =================== Cycle #123, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-18 04:14:51.894 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-18 04:14:51.904 -07 000000501 INF: FPGA: Recv TEC2TEMP 
17-03-18 04:14:51.904 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 2 ms to get response, and 5 ms overall
17-03-18 04:14:51.914 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 04:14:51.914 -07 000000487 INF: FPGA: Recv TEC2EN 
17-03-18 04:14:51.924 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 04:14:51.924 -07 000000610 INF: =================== Cycle #123, Flow Cell Temp 60° ===================
17-03-18 04:14:51.924 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:14:51.924 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 04:14:51.924 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:14:51.954 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 04:14:51.954 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-18 04:14:51.954 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 04:14:52.224 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.996267,
17-03-18 04:14:52.254 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 04:14:52.274 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 04:14:52.274 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 04:14:52.324 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:14:52.344 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 04:14:52.344 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 04:14:52.444 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:14:52.444 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 04:14:52.444 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:14:52.474 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 04:14:52.474 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 04:14:52.474 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 04:14:52.604 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 04:14:52.644 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:14:55.774 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:14:55.814 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:14:56.234 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:14:56.264 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:14:56.654 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-18 04:14:56.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1733, R2=1800, Total=3533. Warn if over 250 bubbles per interval.
17-03-18 04:14:56.684 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:14:56.714 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:14:56.714 -07 000000610 INF: LanePump: Waited 4069 ms for pump motion to complete
17-03-18 04:14:56.714 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:14:56.844 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:14:56.874 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 04:14:56.874 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 04:14:57.004 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:14:57.034 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 04:14:57.034 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 04:14:57.034 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 04:14:57.164 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 04:14:57.194 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:14:57.584 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.001704,
17-03-18 04:14:57.624 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:14:57.654 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:14:57.654 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 04:14:57.654 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:14:58.874 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 04:14:58.874 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-18 04:14:58.874 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:14:58.894 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 04:14:58.894 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-18 04:14:58.894 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-18 04:14:59.024 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 04:14:59.044 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-18 04:14:59.044 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-18 04:14:59.094 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:14:59.114 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 04:14:59.114 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 04:14:59.214 -07 000000610 INF: =================== Cycle #123, Pumping Reagent CMS (4) ===================
17-03-18 04:14:59.214 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 04:14:59.214 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:14:59.254 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 04:14:59.254 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 04:14:59.254 -07 000000610 INF: =================== Cycle #123, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-18 04:14:59.384 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 04:14:59.424 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:00.864 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:00.894 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:01.314 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:01.344 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:01.344 -07 000000610 INF: LanePump: Waited 1920 ms for pump motion to complete
17-03-18 04:15:01.344 -07 000000610 INF: =================== Cycle #123, Pumping Reagent CMS (4) ===================
17-03-18 04:15:01.474 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:01.504 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 04:15:01.504 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 04:15:01.634 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:01.654 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 1
17-03-18 04:15:01.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=1, R2=2, Total=3. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:15:01.664 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 04:15:01.664 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 04:15:01.664 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 04:15:01.794 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 04:15:01.824 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:02.254 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:02.284 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:02.284 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 04:15:02.284 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:15:02.944 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.978563,
17-03-18 04:15:03.504 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-18 04:15:03.504 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 04:15:03.504 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:15:03.524 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 04:15:03.524 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-18 04:15:03.524 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-18 04:15:03.674 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 04:15:03.694 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-18 04:15:03.694 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-18 04:15:03.744 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:15:03.764 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 04:15:03.764 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 04:15:03.864 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:15:03.864 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 04:15:03.864 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:03.894 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 04:15:03.894 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 04:15:03.894 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 04:15:04.024 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 04:15:04.064 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:04.934 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:04.964 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:04.964 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 04:15:04.964 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:15:05.094 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:05.124 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 04:15:05.124 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 04:15:05.254 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:05.284 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 04:15:05.284 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 04:15:05.284 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 04:15:05.414 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 04:15:05.444 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:05.874 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:05.904 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:05.904 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 04:15:05.904 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:15:05.904 -07 000000626 INF: WaitCommand(10000) start
17-03-18 04:15:05.904 -07 000000437 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 04:15:05.904 -07 000000437 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 04:15:06.654 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:15:06.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:15:07.124 -07 000000437 INF: AsyncDelayTimer waited 1216ms
17-03-18 04:15:07.124 -07 000000437 INF: LanePump: Xmit /1?\r
17-03-18 04:15:07.154 -07 000000437 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 04:15:07.154 -07 000000437 INF: LanePump: Current Position of Pump is: 1110
17-03-18 04:15:07.284 -07 000000437 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 04:15:07.324 -07 000000437 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:08.304 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.971733,
17-03-18 04:15:08.854 -07 000000437 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:08.884 -07 000000437 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:09.304 -07 000000437 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:09.334 -07 000000437 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:09.334 -07 000000437 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 04:15:09.334 -07 000000437 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 04:15:09.334 -07 000000437 INF: ===================  ===================
17-03-18 04:15:11.654 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:15:11.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:15:13.664 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.989471,
17-03-18 04:15:15.914 -07 000000626 INF: WaitCommand(10000) end
17-03-18 04:15:15.914 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:15:15.914 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-18 04:15:15.914 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:15.954 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 04:15:15.954 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 04:15:15.954 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 04:15:16.084 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-18 04:15:16.124 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:16.654 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:15:16.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:15:19.024 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.996267,
17-03-18 04:15:21.654 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:15:21.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:15:22.254 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:22.284 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:22.704 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:22.734 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:23.154 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:23.184 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:23.604 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:23.634 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:24.054 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:24.084 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:24.084 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-18 04:15:24.084 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:15:24.214 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:24.254 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 04:15:24.254 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 04:15:24.384 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:24.384 -07 000000625 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.983999,
17-03-18 04:15:24.414 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 04:15:24.414 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 04:15:24.414 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 04:15:24.544 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 04:15:24.574 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:25.004 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:25.034 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:25.034 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 04:15:25.034 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:15:26.254 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-18 04:15:26.254 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-18 04:15:26.254 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:15:26.274 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 04:15:26.274 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-18 04:15:26.274 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-18 04:15:26.484 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 04:15:26.504 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-18 04:15:26.504 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-18 04:15:26.554 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:15:26.574 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 04:15:26.574 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 04:15:26.654 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:15:26.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:15:26.674 -07 000000610 INF: =================== Cycle #123, Pumping Reagent IMT (1) ===================
17-03-18 04:15:26.674 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 04:15:26.674 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:26.704 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 04:15:26.704 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 04:15:26.704 -07 000000610 INF: =================== Cycle #123, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-18 04:15:26.834 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 04:15:26.874 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:28.314 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:28.344 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:28.764 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:28.794 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:28.794 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 04:15:28.794 -07 000000610 INF: =================== Cycle #123, Pumping Reagent IMT (1) ===================
17-03-18 04:15:28.924 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:28.954 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 04:15:28.954 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 04:15:29.084 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:29.114 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 04:15:29.114 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 04:15:29.114 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 04:15:29.244 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 04:15:29.274 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:29.704 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:29.734 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:29.734 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 04:15:29.734 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:15:29.744 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.999021,
17-03-18 04:15:30.954 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-18 04:15:30.954 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 04:15:30.954 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:15:30.974 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 04:15:30.974 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-18 04:15:30.974 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 04:15:31.204 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 04:15:31.224 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-18 04:15:31.224 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-18 04:15:31.274 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:15:31.294 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 04:15:31.294 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 04:15:31.394 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:15:31.394 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 04:15:31.394 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:31.424 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 04:15:31.424 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 04:15:31.424 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 04:15:31.554 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 04:15:31.594 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:15:31.654 -07 000000437 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:15:31.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:15:32.464 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:32.494 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:32.494 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 04:15:32.494 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:15:32.624 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:32.654 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 04:15:32.654 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 04:15:32.784 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:15:32.814 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 04:15:32.814 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 04:15:32.814 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 04:15:32.944 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 04:15:32.974 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:33.404 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:15:33.434 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:15:33.434 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 04:15:33.434 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:15:33.434 -07 000000610 INF: =================== Cycle #123, Flow Cell Temp 65° ===================
17-03-18 04:15:33.434 -07 000000610 INF: =================== Cycle #123, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-18 04:15:33.434 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-18 04:15:33.434 -07 000000512 INF: FPGA: Recv TEC2TEMP 
17-03-18 04:15:33.444 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:15:33.444 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 04:15:33.444 -07 000000012 INF: FPGA: Recv TEC2EN 
17-03-18 04:15:33.454 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:15:33.454 -07 000000610 INF: =================== Cycle #123, Flow Cell Temp 65° ===================
17-03-18 04:15:33.454 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:15:33.454 -07 000000610 INF: WaitCommand(30000) start
17-03-18 04:15:35.104 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.989471,
17-03-18 04:15:36.654 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:15:36.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:15:40.464 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.000345,
17-03-18 04:15:41.654 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:15:41.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:15:45.824 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.981281,
17-03-18 04:15:46.654 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:15:46.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:15:51.184 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.015368,
17-03-18 04:15:51.654 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:15:51.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:15:56.544 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.000345,
17-03-18 04:15:56.654 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:15:56.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:01.654 -07 000000625 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:01.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:01.904 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.994908,
17-03-18 04:16:03.464 -07 000000610 INF: WaitCommand(30000) end
17-03-18 04:16:03.464 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:16:03.464 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-18 04:16:03.564 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:03.594 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 04:16:03.594 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 04:16:03.594 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 04:16:03.724 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-18 04:16:03.764 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:16:04.304 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:04.334 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:04.334 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete
17-03-18 04:16:04.334 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:16:04.464 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:04.494 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 04:16:04.494 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 04:16:04.624 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:04.654 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 04:16:04.654 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 04:16:04.654 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 04:16:04.784 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 04:16:04.814 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:05.244 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:05.274 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:05.274 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 04:16:05.274 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:16:05.274 -07 000000438 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 04:16:05.274 -07 000000444 INF: WaitCommand(30000) start
17-03-18 04:16:05.274 -07 000000438 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 04:16:06.494 -07 000000438 INF: AsyncDelayTimer waited 1214ms
17-03-18 04:16:06.494 -07 000000438 INF: LanePump: Xmit /1?\r
17-03-18 04:16:06.524 -07 000000438 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 04:16:06.524 -07 000000438 INF: LanePump: Current Position of Pump is: 1920
17-03-18 04:16:06.654 -07 000000438 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 04:16:06.654 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:06.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:06.694 -07 000000438 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:16:07.264 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.994908,
17-03-18 04:16:09.034 -07 000000438 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:09.064 -07 000000438 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:16:09.484 -07 000000438 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:09.514 -07 000000438 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:09.514 -07 000000438 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-18 04:16:09.514 -07 000000438 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 04:16:09.514 -07 000000438 INF: ===================  ===================
17-03-18 04:16:11.654 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:11.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:12.624 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.03576,
17-03-18 04:16:16.654 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:16.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:17.984 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.011254,
17-03-18 04:16:21.654 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:21.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:23.344 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.996267,
17-03-18 04:16:26.654 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:26.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:28.704 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.990831,
17-03-18 04:16:31.654 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:31.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:34.064 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.983999,
17-03-18 04:16:35.284 -07 000000444 INF: WaitCommand(30000) end
17-03-18 04:16:35.284 -07 000000610 INF: =================== Cycle #123, Flow Cell Temp 22° ===================
17-03-18 04:16:35.284 -07 000000610 INF: =================== Cycle #123, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-18 04:16:35.284 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-18 04:16:35.294 -07 000000437 INF: FPGA: Recv TEC2TEMP 
17-03-18 04:16:35.294 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 04:16:35.294 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 04:16:35.294 -07 000000487 INF: FPGA: Recv TEC2EN 
17-03-18 04:16:35.304 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:16:35.304 -07 000000610 INF: =================== Cycle #123, Flow Cell Temp 22° ===================
17-03-18 04:16:35.304 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:16:35.304 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:16:35.304 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 04:16:35.304 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:35.334 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 04:16:35.334 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 04:16:35.334 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 04:16:35.464 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 04:16:35.504 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:16:36.654 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:36.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:38.634 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:38.664 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:16:39.084 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:39.114 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:16:39.424 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.975845,
17-03-18 04:16:39.534 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:39.564 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:39.564 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 04:16:39.564 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:16:39.694 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:39.724 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 04:16:39.724 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 04:16:39.854 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:39.884 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 04:16:39.884 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 04:16:39.884 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 04:16:40.014 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 04:16:40.044 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:40.474 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:40.504 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:40.504 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 04:16:40.504 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:16:41.654 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:41.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:41.724 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-18 04:16:41.724 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-18 04:16:41.724 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:16:41.744 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 04:16:41.744 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-18 04:16:41.744 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-18 04:16:41.894 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 04:16:41.914 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 04:16:41.914 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 04:16:41.964 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:16:41.984 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 04:16:41.984 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 04:16:42.084 -07 000000610 INF: =================== Cycle #123, Pumping Reagent USM (2) ===================
17-03-18 04:16:42.084 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 04:16:42.084 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:42.114 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 04:16:42.114 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 04:16:42.114 -07 000000610 INF: =================== Cycle #123, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-18 04:16:42.244 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 04:16:42.284 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:16:43.724 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:43.754 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:16:44.174 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:44.204 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:44.204 -07 000000610 INF: LanePump: Waited 1921 ms for pump motion to complete
17-03-18 04:16:44.204 -07 000000610 INF: =================== Cycle #123, Pumping Reagent USM (2) ===================
17-03-18 04:16:44.334 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:44.364 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 04:16:44.364 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 04:16:44.494 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:44.524 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 04:16:44.524 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 04:16:44.524 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 04:16:44.654 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 04:16:44.684 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:44.784 -07 000000474 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.974486,
17-03-18 04:16:45.114 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:45.144 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:45.144 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 04:16:45.144 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:16:46.364 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 04:16:46.364 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 04:16:46.364 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:16:46.384 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 04:16:46.384 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-18 04:16:46.384 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 04:16:46.534 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 04:16:46.554 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 04:16:46.554 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 04:16:46.604 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:16:46.624 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 04:16:46.624 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 04:16:46.654 -07 000000625 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:46.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:46.724 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:16:46.724 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 04:16:46.724 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:46.754 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 04:16:46.754 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 04:16:46.754 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 04:16:46.884 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 04:16:46.924 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:16:47.794 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:47.824 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:47.824 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 04:16:47.824 -07 000000610 INF: =================== Cycle #123, Pumping Reagent PR2 (3) ===================
17-03-18 04:16:47.954 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:47.984 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 04:16:47.984 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 04:16:48.114 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 04:16:48.144 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 04:16:48.144 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 04:16:48.144 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 04:16:48.274 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 04:16:48.304 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:48.734 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:48.764 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:48.764 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 04:16:48.764 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:16:48.764 -07 000000438 INF: WaitCommand(10000) start
17-03-18 04:16:48.764 -07 000000480 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 04:16:48.764 -07 000000480 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 04:16:49.984 -07 000000480 INF: AsyncDelayTimer waited 1216ms
17-03-18 04:16:49.984 -07 000000480 INF: LanePump: Xmit /1?\r
17-03-18 04:16:50.014 -07 000000480 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 04:16:50.014 -07 000000480 INF: LanePump: Current Position of Pump is: 1110
17-03-18 04:16:50.144 -07 000000480 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 04:16:50.144 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.009895,
17-03-18 04:16:50.184 -07 000000480 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:16:51.654 -07 000000437 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:51.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:51.714 -07 000000480 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:51.744 -07 000000480 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 04:16:52.164 -07 000000480 INF: LanePump: Xmit /1Q\r
17-03-18 04:16:52.194 -07 000000480 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 04:16:52.194 -07 000000480 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 04:16:52.194 -07 000000480 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 04:16:52.194 -07 000000480 INF: ===================  ===================
17-03-18 04:16:55.504 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.042558,
17-03-18 04:16:56.654 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:16:56.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:16:58.774 -07 000000438 INF: WaitCommand(10000) end
17-03-18 04:16:58.774 -07 000000610 INF: =================== Cycle #123, Imaging ===================
17-03-18 04:16:58.774 -07 000000610 INF: Imaging Cycle 123: ScanTilesCommand Cycle 123 time start.
17-03-18 04:16:58.774 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-18 04:16:58.774 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:16:58.804 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 04:16:58.804 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-18 04:16:58.804 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-18 04:16:59.104 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 04:16:59.124 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 04:16:59.124 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 04:16:59.174 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 04:16:59.194 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 04:16:59.194 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:16:59.194 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:16:59.194 -07 000000579 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-18 04:16:59.194 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:16:59.194 -07 000000579 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-18 04:16:59.204 -07 000000590 INF: FPGA: Recv EXLED1ON 
17-03-18 04:16:59.204 -07 000000579 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 04:16:59.204 -07 000000579 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-18 04:16:59.204 -07 000000608 INF: FPGA: Recv EXLED1ADCR 23172
17-03-18 04:16:59.214 -07 000000579 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:16:59.214 -07 000000579 INF: RedLED: Using Red data: Photodiode ADC 23172 --> 7.4 mW (old method), or 205.4 mW (new method). Difference = 197.9 mW
17-03-18 04:16:59.214 -07 000000579 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-18 04:16:59.214 -07 000000438 INF: FPGA: Recv EXLED1OFF 
17-03-18 04:16:59.224 -07 000000579 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:16:59.224 -07 000000579 INF: RedLED: LED was on for 20 ms
17-03-18 04:16:59.224 -07 000000579 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 23 ms.
17-03-18 04:16:59.224 -07 000000579 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-18 04:16:59.224 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:16:59.224 -07 000000579 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-18 04:16:59.224 -07 000000590 INF: FPGA: Recv EXLED2ON 
17-03-18 04:16:59.234 -07 000000579 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:16:59.234 -07 000000579 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 04:16:59.234 -07 000000012 INF: FPGA: Recv EXLED1ADCR 2096
17-03-18 04:16:59.244 -07 000000579 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:16:59.244 -07 000000579 INF: GreenLED: Using Green data: Photodiode ADC 2096 --> 0.9 mW (old method), or 182.2 mW (new method). Difference = 181.2 mW
17-03-18 04:16:59.244 -07 000000579 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-18 04:16:59.244 -07 000000447 INF: FPGA: Recv EXLED2OFF 
17-03-18 04:16:59.254 -07 000000579 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:16:59.254 -07 000000579 INF: GreenLED: LED was on for 19 ms
17-03-18 04:16:59.254 -07 000000579 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-18 04:16:59.254 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 04:16:59.254 -07 000000608 INF: FPGA: Recv EMCUR 
17-03-18 04:16:59.264 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:16:59.264 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-18 04:16:59.764 -07 000000618 INF: FPGA: Recv EMOUT
17-03-18 04:16:59.764 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 04:16:59.764 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-18 04:16:59.764 -07 000000455 INF: FPGA: Recv EMCUR 
17-03-18 04:16:59.774 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:16:59.774 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 04:16:59.774 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.38427734375, Z-Position -0.126644776758628. ------
17-03-18 04:16:59.774 -07 000000585 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:16:59.774 -07 000000487 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17842 mm
17-03-18 04:16:59.774 -07 000000487 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:16:59.784 -07 000000437 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:16:59.784 -07 000000585 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:16:59.784 -07 000000625 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 04:16:59.784 -07 000000625 INF: Y Motor: Moving to 59.9126 mm, started at 75.3843 mm, delta = -15.4717 mm
17-03-18 04:16:59.784 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 38975, sync = True, waitForSettling = False)
17-03-18 04:16:59.784 -07 000000447 INF: Z Motor: Moving to -0.178416 mm, started at -0.126645 mm, distance = -51.77 um
17-03-18 04:16:59.784 -07 000000585 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:16:59.794 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:16:59.794 -07 000000590 INF: FPGA: Recv YRDPOS 154388
17-03-18 04:16:59.804 -07 000000447 INF: FPGA: Xmit ZDACW 38975\n [Z Motor]
17-03-18 04:16:59.804 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 04:16:59.804 -07 000000625 INF: Y Motor: Encoder = 154388 = motor step 120615.6 = 75.3848 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:16:59.804 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 04:16:59.804 -07 000000625 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-18 04:16:59.804 -07 000000625 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 04:16:59.814 -07 000000447 INF: FPGA: 'ZDACW 38975' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 04:16:59.814 -07 000000625 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 04:16:59.824 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:16:59.824 -07 000000480 INF: FPGA: Recv ZDACR 38975
17-03-18 04:16:59.834 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:16:59.834 -07 000000447 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-18 04:16:59.984 -07 000000590 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:16:59.984 -07 000000585 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 195 ms to get response, and 203 ms overall
17-03-18 04:17:00.864 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.047997,
17-03-18 04:17:01.494 -07 000000590 INF: FPGA: Recv YMVTO 122703 24782
17-03-18 04:17:01.494 -07 000000625 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1679 ms to get response, and 1695 ms overall
17-03-18 04:17:01.494 -07 000000625 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 04:17:01.494 -07 000000625 INF: Y Motor: To move from 75.385 to 59.913 (-15.472 mm) should take 24755 steps, but required 24782 steps (15.489 mm). Slippage = 0.017 mm (0.00%).
17-03-18 04:17:01.494 -07 000000625 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1695 ms, distance = 15.472 mm, average velocity = 9.128 mm/sec
17-03-18 04:17:01.654 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:01.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:04.344 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:04.344 -07 000000479 INF: FPGA: Recv YRDPOS 122697
17-03-18 04:17:04.354 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:04.354 -07 000000625 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:04.384 -07 000000625 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:04.384 -07 000000625 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm)
17-03-18 04:17:04.384 -07 000000625 INF: Y Motor: Moved to 59.9106 after 4599 ms
17-03-18 04:17:04.384 -07 000000487 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178416 mm (DAC = 38975)
17-03-18 04:17:04.384 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:04.384 -07 000000438 INF: FPGA: Recv ZSGSRD 37068
17-03-18 04:17:04.394 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:17:04.394 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:04.394 -07 000000012 INF: FPGA: Recv ZSGSRD 37059
17-03-18 04:17:04.404 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:04.404 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:04.404 -07 000000480 INF: FPGA: Recv ZSGSRD 37061
17-03-18 04:17:04.414 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:04.414 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:04.414 -07 000000479 INF: FPGA: Recv ZSGSRD 37058
17-03-18 04:17:04.424 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:04.424 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:04.424 -07 000000608 INF: FPGA: Recv ZSGSRD 37066
17-03-18 04:17:04.434 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:04.434 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:04.434 -07 000000447 INF: FPGA: Recv ZSGSRD 37063
17-03-18 04:17:04.444 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:04.444 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:04.444 -07 000000585 INF: FPGA: Recv ZSGSRD 37066
17-03-18 04:17:04.454 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:04.454 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:04.454 -07 000000512 INF: FPGA: Recv ZSGSRD 37058
17-03-18 04:17:04.464 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:04.464 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:04.464 -07 000000626 INF: FPGA: Recv ZSGSRD 37062
17-03-18 04:17:04.474 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:04.474 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:04.474 -07 000000590 INF: FPGA: Recv ZSGSRD 37063
17-03-18 04:17:04.484 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:04.484 -07 000000487 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:04.484 -07 000000501 INF: FPGA: Recv ZPIEZORD 33248
17-03-18 04:17:04.494 -07 000000487 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:04.494 -07 000000487 INF: Z Motor: Piezo is near 51.0 V (nominally 0 to 100 V), expect near 59.5 V, since DAC is at 5.947 V. Piezo Error = -8.4 V.
17-03-18 04:17:04.494 -07 000000487 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.4 um, Read 10 ADC samples: Avg = 37062 (-177.5 uncal um), Error = 0.9 uncal um, Median = 37062 (-177.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 37058 (-177.5 uncal um), Max = 37068 (-177.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 04:17:04.494 -07 000000487 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37062, posNoise = 6, negNoise = 4
17-03-18 04:17:04.494 -07 000000487 INF: Z Motor: After move to -0.178416, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:04.494 -07 000000487 INF: Z Motor: Settle wait time = 4602 ms, measure time = 108 ms (allowed 150 ms), total time = 4710 ms
17-03-18 04:17:04.494 -07 000000487 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:04.544 -07 000000487 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4763 ms
17-03-18 04:17:04.544 -07 000000487 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:04.544 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:04.544 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:04.544 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:04.544 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:04.544 -07 000000585 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:17:04.544 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:04.544 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:04.544 -07 000000585 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 04:17:04.574 -07 000000585 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 04:17:04.574 -07 000000585 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:17:04.574 -07 000000585 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 04:17:04.574 -07 000000585 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:17:04.584 -07 000000585 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 04:17:04.584 -07 000000585 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 43 ms.
17-03-18 04:17:04.594 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:17:04.634 -07 000000455 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:17:04.934 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:17:04.934 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:17:04.934 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:17:04.944 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) start.
17-03-18 04:17:04.974 -07 000000474 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:17:04.974 -07 000000501 INF: FPGA: Recv CAMSNAP
17-03-18 04:17:04.974 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall
17-03-18 04:17:05.064 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 04:17:05.064 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:05.064 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:17:05.064 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 04:17:05.174 -07 000000625 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:17:05.174 -07 000000579 INF: Image SNR check: start
17-03-18 04:17:05.174 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:17:05.184 -07 000000625 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:17:05.184 -07 000000625 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:17:05.194 -07 000000579 INF: Image SNR check: pass  [peak (Max-Min)=140.58]
17-03-18 04:17:05.194 -07 000000579 INF: Autofocus start
17-03-18 04:17:05.194 -07 000000579 INF: MeasureProfile start
17-03-18 04:17:05.204 -07 000000579 INF: MeasureProfile done
17-03-18 04:17:05.204 -07 000000579 INF: X=32  Z correction [um]=0.09220707
17-03-18 04:17:05.204 -07 000000579 INF: Autofocus finished
17-03-18 04:17:05.384 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:17:05.384 -07 000000625 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 04:17:05.384 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.17841750240908. ----------
17-03-18 04:17:05.384 -07 000000610 INF: Cycle	123	Tile	1	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:05.394 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37508, sync = True, waitForSettling = True)
17-03-18 04:17:05.394 -07 000000610 INF: Z Motor: Moving to -0.171701 mm, started at -0.178418 mm, distance = 6.72 um
17-03-18 04:17:05.394 -07 000000610 INF: FPGA: Xmit ZDACW 37508\n [Z Motor]
17-03-18 04:17:05.394 -07 000000487 INF: FPGA: Recv ZDACW
17-03-18 04:17:05.404 -07 000000610 INF: FPGA: 'ZDACW 37508' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.404 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:05.404 -07 000000561 INF: FPGA: Recv ZDACR 37508
17-03-18 04:17:05.414 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.414 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:05.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:05.564 -07 000000012 INF: FPGA: Recv ZSGSRD 36014
17-03-18 04:17:05.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:05.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:05.574 -07 000000608 INF: FPGA: Recv ZSGSRD 36023
17-03-18 04:17:05.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:05.584 -07 000000447 INF: FPGA: Recv ZSGSRD 36016
17-03-18 04:17:05.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:05.594 -07 000000585 INF: FPGA: Recv ZSGSRD 36021
17-03-18 04:17:05.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:05.604 -07 000000437 INF: FPGA: Recv ZSGSRD 36023
17-03-18 04:17:05.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:05.614 -07 000000512 INF: FPGA: Recv ZSGSRD 36017
17-03-18 04:17:05.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:05.624 -07 000000608 INF: FPGA: Recv ZSGSRD 36019
17-03-18 04:17:05.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:05.634 -07 000000012 INF: FPGA: Recv ZSGSRD 36014
17-03-18 04:17:05.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:05.644 -07 000000608 INF: FPGA: Recv ZSGSRD 36020
17-03-18 04:17:05.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:05.654 -07 000000447 INF: FPGA: Recv ZSGSRD 36017
17-03-18 04:17:05.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.664 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:05.664 -07 000000608 INF: FPGA: Recv ZPIEZORD 31848
17-03-18 04:17:05.674 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:05.674 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.723 V. Piezo Error = -9.2 V.
17-03-18 04:17:05.674 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.7 um, Read 10 ADC samples: Avg = 36018 (-170.8 uncal um), Error = 0.9 uncal um, Median = 36018 (-170.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 36014 (-170.8 uncal um), Max = 36023 (-170.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 04:17:05.674 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36018, posNoise = 5, negNoise = 4
17-03-18 04:17:05.674 -07 000000610 INF: Z Motor: After move to -0.171701, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:05.674 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 04:17:05.674 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:05.674 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:05.674 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:05.674 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:05.674 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:05.674 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:05.674 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:05.674 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:05.674 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:05.674 -07 000000437 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 04:17:05.674 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 4 ms.
17-03-18 04:17:05.674 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:05.684 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:17:05.684 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:05.694 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 04:17:05.694 -07 000000479 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 04:17:05.704 -07 000000437 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 21 ms.
17-03-18 04:17:05.704 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:05.704 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:17:05.704 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:05.714 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 04:17:05.714 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 43 ms.
17-03-18 04:17:05.724 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 37685 150\n [Camera]
17-03-18 04:17:05.924 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:06.224 -07 000000611 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.020806,
17-03-18 04:17:06.334 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:06.334 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:06.344 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:06.344 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:06.344 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:06.344 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:06.354 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:06.354 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 04:17:06.354 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:06.354 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 04:17:06.534 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37685 803
17-03-18 04:17:06.654 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:06.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:06.684 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:06.824 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 467 ms.
17-03-18 04:17:06.824 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 468 ms.
17-03-18 04:17:06.824 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:06.824 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 465 ms.
17-03-18 04:17:06.824 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 466 ms.
17-03-18 04:17:06.824 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:06.824 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:06.824 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 485 ms.
17-03-18 04:17:06.824 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:06.834 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 490 ms.
17-03-18 04:17:06.884 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:06.884 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:06.884 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:06.884 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:06.884 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:06.884 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:06.894 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:06.894 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 654475248, 0x0, 418435064) start.
17-03-18 04:17:06.894 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:06.894 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 04:17:07.074 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:07.074 -07 000000487 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:07.074 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 37685 150' command took 2 ms to send, 1344 ms to get response, and 1353 ms overall
17-03-18 04:17:07.074 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.171959
17-03-18 04:17:07.074 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17196 mm
17-03-18 04:17:07.074 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:07.074 -07 000000437 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 04:17:07.074 -07 000000437 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-18 04:17:07.074 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:07.074 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 37565, sync = True, waitForSettling = False)
17-03-18 04:17:07.074 -07 000000444 INF: Z Motor: Moving to -0.171962 mm, started at -0.171711 mm, distance = -0.25 um
17-03-18 04:17:07.084 -07 000000444 INF: FPGA: Xmit ZDACW 37565\n [Z Motor]
17-03-18 04:17:07.084 -07 000000626 INF: FPGA: Recv YRDPOS 122697
17-03-18 04:17:07.084 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 04:17:07.084 -07 000000437 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:07.084 -07 000000437 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:07.084 -07 000000437 INF: Y Motor: Moving 1331 steps2
17-03-18 04:17:07.084 -07 000000487 INF: FPGA: Recv ZDACW
17-03-18 04:17:07.094 -07 000000444 INF: FPGA: 'ZDACW 37565' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:07.094 -07 000000437 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:07.104 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:07.104 -07 000000590 INF: FPGA: Recv ZDACR 37565
17-03-18 04:17:07.114 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:07.114 -07 000000444 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 04:17:07.294 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 04:17:07.294 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 04:17:07.294 -07 000000479 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:07.294 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:07.294 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 411 ms.
17-03-18 04:17:07.294 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 654475248, 0x0, 418435064) end. Duration was 404 ms.
17-03-18 04:17:07.294 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-18 04:17:07.294 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:07.294 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:07.304 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 419 ms.
17-03-18 04:17:07.464 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 04:17:07.464 -07 000000437 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 04:17:07.504 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:07.514 -07 000000579 INF: FPGA: Recv YRDPOS 124381
17-03-18 04:17:07.514 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 04:17:07.514 -07 000000437 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:07.514 -07 000000437 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 04:17:07.514 -07 000000437 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.832 mm, average velocity = 2.155 mm/sec
17-03-18 04:17:08.464 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:08.464 -07 000000512 INF: FPGA: Recv YRDPOS 124381
17-03-18 04:17:08.474 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:08.474 -07 000000437 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:08.504 -07 000000437 INF: Y Motor: After move to 60.742607, error = -0.009697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:08.504 -07 000000437 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:08.504 -07 000000437 INF: Y Motor: Moved to 60.7329 after 1422 ms (table move)
17-03-18 04:17:08.504 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171962 mm (DAC = 37565)
17-03-18 04:17:08.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.504 -07 000000579 INF: FPGA: Recv ZSGSRD 36060
17-03-18 04:17:08.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:17:08.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.514 -07 000000618 INF: FPGA: Recv ZSGSRD 36055
17-03-18 04:17:08.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.524 -07 000000611 INF: FPGA: Recv ZSGSRD 36055
17-03-18 04:17:08.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.534 -07 000000480 INF: FPGA: Recv ZSGSRD 36063
17-03-18 04:17:08.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.544 -07 000000437 INF: FPGA: Recv ZSGSRD 36063
17-03-18 04:17:08.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.554 -07 000000447 INF: FPGA: Recv ZSGSRD 36060
17-03-18 04:17:08.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.564 -07 000000444 INF: FPGA: Recv ZSGSRD 36057
17-03-18 04:17:08.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.574 -07 000000447 INF: FPGA: Recv ZSGSRD 36061
17-03-18 04:17:08.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.584 -07 000000590 INF: FPGA: Recv ZSGSRD 36058
17-03-18 04:17:08.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.594 -07 000000501 INF: FPGA: Recv ZSGSRD 36052
17-03-18 04:17:08.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.604 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:08.604 -07 000000626 INF: FPGA: Recv ZPIEZORD 31949
17-03-18 04:17:08.614 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.614 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.732 V. Piezo Error = -9.1 V.
17-03-18 04:17:08.614 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.0 um, Read 10 ADC samples: Avg = 36058 (-171.1 uncal um), Error = 0.9 uncal um, Median = 36059 (-171.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36052 (-171.0 uncal um), Max = 36063 (-171.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:17:08.614 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36058, posNoise = 5, negNoise = 6
17-03-18 04:17:08.614 -07 000000610 INF: Z Motor: After move to -0.171962, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:08.614 -07 000000610 INF: Z Motor: Settle wait time = 1424 ms, measure time = 107 ms (allowed 150 ms), total time = 1531 ms
17-03-18 04:17:08.614 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:08.664 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1583 ms
17-03-18 04:17:08.664 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:08.664 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73291015625, Z-position -0.171967593418752. ----------
17-03-18 04:17:08.664 -07 000000610 INF: Cycle	123	Tile	2	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:08.664 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37388, sync = True, waitForSettling = True)
17-03-18 04:17:08.664 -07 000000610 INF: Z Motor: Moving to -0.171151 mm, started at -0.171968 mm, distance = 0.82 um
17-03-18 04:17:08.664 -07 000000610 INF: FPGA: Xmit ZDACW 37388\n [Z Motor]
17-03-18 04:17:08.664 -07 000000608 INF: FPGA: Recv ZDACW
17-03-18 04:17:08.674 -07 000000610 INF: FPGA: 'ZDACW 37388' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:17:08.674 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:08.674 -07 000000437 INF: FPGA: Recv ZDACR 37388
17-03-18 04:17:08.684 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.684 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:08.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.834 -07 000000444 INF: FPGA: Recv ZSGSRD 35929
17-03-18 04:17:08.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:08.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.844 -07 000000455 INF: FPGA: Recv ZSGSRD 35934
17-03-18 04:17:08.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.854 -07 000000611 INF: FPGA: Recv ZSGSRD 35935
17-03-18 04:17:08.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.864 -07 000000585 INF: FPGA: Recv ZSGSRD 35935
17-03-18 04:17:08.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.874 -07 000000012 INF: FPGA: Recv ZSGSRD 35935
17-03-18 04:17:08.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.884 -07 000000608 INF: FPGA: Recv ZSGSRD 35932
17-03-18 04:17:08.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.894 -07 000000585 INF: FPGA: Recv ZSGSRD 35926
17-03-18 04:17:08.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.904 -07 000000611 INF: FPGA: Recv ZSGSRD 35930
17-03-18 04:17:08.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.914 -07 000000487 INF: FPGA: Recv ZSGSRD 35933
17-03-18 04:17:08.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:08.924 -07 000000512 INF: FPGA: Recv ZSGSRD 35933
17-03-18 04:17:08.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.934 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:08.934 -07 000000579 INF: FPGA: Recv ZPIEZORD 31800
17-03-18 04:17:08.944 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:08.944 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.705 V. Piezo Error = -9.1 V.
17-03-18 04:17:08.944 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.2 um, Read 10 ADC samples: Avg = 35932 (-170.3 uncal um), Error = 0.9 uncal um, Median = 35933 (-170.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35926 (-170.2 uncal um), Max = 35935 (-170.3 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:17:08.944 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35932, posNoise = 3, negNoise = 6
17-03-18 04:17:08.944 -07 000000610 INF: Z Motor: After move to -0.171151, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:08.944 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 04:17:08.944 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:08.944 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:08.944 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:08.944 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:08.944 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:08.944 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:08.944 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:08.944 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:08.944 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:08.944 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:08.944 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:08.944 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:08.944 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:17:08.944 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:08.954 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 04:17:08.954 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:08.964 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 04:17:08.964 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 04:17:08.964 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 04:17:08.964 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:17:08.964 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 37565 150\n [Camera]
17-03-18 04:17:09.164 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:09.584 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:09.584 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:09.584 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:09.584 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:09.584 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) start.
17-03-18 04:17:09.594 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:09.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:09.594 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:09.594 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:09.594 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) start.
17-03-18 04:17:09.784 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37565 803
17-03-18 04:17:09.924 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:09.984 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 04:17:09.984 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 04:17:09.984 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:09.984 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:09.984 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 04:17:09.994 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 04:17:09.994 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 04:17:09.994 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:09.994 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:10.004 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 04:17:10.134 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:10.134 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:10.134 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:10.134 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:10.134 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2369425112, 0x0, 391868352) start.
17-03-18 04:17:10.134 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:10.134 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:10.134 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:10.134 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:10.134 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1111624864, 0x0, 418435064) start.
17-03-18 04:17:10.324 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:10.324 -07 000000585 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:10.324 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 37565 150' command took 2 ms to send, 1343 ms to get response, and 1353 ms overall
17-03-18 04:17:10.324 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.171914
17-03-18 04:17:10.324 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17191 mm
17-03-18 04:17:10.324 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:10.324 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 04:17:10.324 -07 000000501 INF: Y Motor: Moving to 61.5726 mm, started at 60.7329 mm, delta = 0.8397 mm
17-03-18 04:17:10.324 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:10.324 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 37555, sync = True, waitForSettling = False)
17-03-18 04:17:10.324 -07 000000611 INF: Z Motor: Moving to -0.171916 mm, started at -0.171158 mm, distance = -0.76 um
17-03-18 04:17:10.334 -07 000000611 INF: FPGA: Xmit ZDACW 37555\n [Z Motor]
17-03-18 04:17:10.334 -07 000000608 INF: FPGA: Recv YRDPOS 124381
17-03-18 04:17:10.334 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 04:17:10.334 -07 000000501 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:10.334 -07 000000501 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:10.334 -07 000000501 INF: Y Motor: Moving 1344 steps-20
17-03-18 04:17:10.334 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 04:17:10.344 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:10.344 -07 000000611 INF: FPGA: 'ZDACW 37555' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:10.354 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:10.354 -07 000000487 INF: FPGA: Recv ZDACR 37555
17-03-18 04:17:10.364 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:10.364 -07 000000611 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 04:17:10.534 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1111624864, 0x0, 418435064) end. Duration was 402 ms.
17-03-18 04:17:10.534 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 04:17:10.534 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:10.534 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2369425112, 0x0, 391868352) end. Duration was 404 ms.
17-03-18 04:17:10.534 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 04:17:10.534 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:10.544 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:10.544 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:10.544 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 410 ms.
17-03-18 04:17:10.544 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-18 04:17:10.714 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-18 04:17:10.714 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 04:17:10.764 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:10.764 -07 000000579 INF: FPGA: Recv YRDPOS 126083
17-03-18 04:17:10.774 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:17:10.774 -07 000000501 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:10.774 -07 000000501 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 04:17:10.774 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.840 mm, average velocity = 2.181 mm/sec
17-03-18 04:17:11.584 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.003063,
17-03-18 04:17:11.654 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:11.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:11.724 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:11.724 -07 000000618 INF: FPGA: Recv YRDPOS 126083
17-03-18 04:17:11.734 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:11.734 -07 000000501 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:11.764 -07 000000501 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:11.764 -07 000000501 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:11.764 -07 000000501 INF: Y Motor: Moved to 61.5640 after 1431 ms (table move)
17-03-18 04:17:11.764 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171916 mm (DAC = 37555)
17-03-18 04:17:11.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:11.764 -07 000000590 INF: FPGA: Recv ZSGSRD 36048
17-03-18 04:17:11.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:17:11.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:11.774 -07 000000618 INF: FPGA: Recv ZSGSRD 36044
17-03-18 04:17:11.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:11.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:11.784 -07 000000479 INF: FPGA: Recv ZSGSRD 36057
17-03-18 04:17:11.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:11.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:11.794 -07 000000625 INF: FPGA: Recv ZSGSRD 36051
17-03-18 04:17:11.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:11.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:11.804 -07 000000437 INF: FPGA: Recv ZSGSRD 36053
17-03-18 04:17:11.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:11.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:11.814 -07 000000590 INF: FPGA: Recv ZSGSRD 36063
17-03-18 04:17:11.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:11.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:11.824 -07 000000626 INF: FPGA: Recv ZSGSRD 36047
17-03-18 04:17:11.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:11.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:11.834 -07 000000012 INF: FPGA: Recv ZSGSRD 36052
17-03-18 04:17:11.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:11.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:11.844 -07 000000487 INF: FPGA: Recv ZSGSRD 36046
17-03-18 04:17:11.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:11.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:11.854 -07 000000501 INF: FPGA: Recv ZSGSRD 36049
17-03-18 04:17:11.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:11.864 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:11.864 -07 000000455 INF: FPGA: Recv ZPIEZORD 31940
17-03-18 04:17:11.874 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:11.874 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.731 V. Piezo Error = -9.1 V.
17-03-18 04:17:11.874 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36051 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36050 (-171.0 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 36044 (-171.0 uncal um), Max = 36063 (-171.1 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:17:11.874 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36051, posNoise = 12, negNoise = 7
17-03-18 04:17:11.874 -07 000000610 INF: Z Motor: After move to -0.171916, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:11.874 -07 000000610 INF: Z Motor: Settle wait time = 1434 ms, measure time = 106 ms (allowed 150 ms), total time = 1540 ms
17-03-18 04:17:11.874 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:11.924 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-18 04:17:11.924 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:11.924 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.171922623933759. ----------
17-03-18 04:17:11.924 -07 000000610 INF: Cycle	123	Tile	3	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:11.924 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37378, sync = True, waitForSettling = True)
17-03-18 04:17:11.924 -07 000000610 INF: Z Motor: Moving to -0.171106 mm, started at -0.171923 mm, distance = 0.82 um
17-03-18 04:17:11.924 -07 000000610 INF: FPGA: Xmit ZDACW 37378\n [Z Motor]
17-03-18 04:17:11.924 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 04:17:11.934 -07 000000610 INF: FPGA: 'ZDACW 37378' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:17:11.934 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:11.934 -07 000000438 INF: FPGA: Recv ZDACR 37378
17-03-18 04:17:11.944 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:11.944 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:12.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:12.094 -07 000000625 INF: FPGA: Recv ZSGSRD 35926
17-03-18 04:17:12.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:12.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:12.104 -07 000000501 INF: FPGA: Recv ZSGSRD 35929
17-03-18 04:17:12.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:12.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:12.114 -07 000000012 INF: FPGA: Recv ZSGSRD 35925
17-03-18 04:17:12.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:12.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:12.124 -07 000000618 INF: FPGA: Recv ZSGSRD 35926
17-03-18 04:17:12.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:12.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:12.134 -07 000000626 INF: FPGA: Recv ZSGSRD 35929
17-03-18 04:17:12.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:12.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:12.144 -07 000000447 INF: FPGA: Recv ZSGSRD 35925
17-03-18 04:17:12.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:12.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:12.154 -07 000000438 INF: FPGA: Recv ZSGSRD 35922
17-03-18 04:17:12.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:12.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:12.164 -07 000000437 INF: FPGA: Recv ZSGSRD 35926
17-03-18 04:17:12.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:12.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:12.174 -07 000000618 INF: FPGA: Recv ZSGSRD 35924
17-03-18 04:17:12.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:12.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:12.194 -07 000000501 INF: FPGA: Recv ZSGSRD 35931
17-03-18 04:17:12.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:12.204 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:12.204 -07 000000618 INF: FPGA: Recv ZPIEZORD 31783
17-03-18 04:17:12.214 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:12.214 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.704 V. Piezo Error = -9.1 V.
17-03-18 04:17:12.214 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35926 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35926 (-170.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35922 (-170.2 uncal um), Max = 35931 (-170.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 04:17:12.214 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35926, posNoise = 5, negNoise = 4
17-03-18 04:17:12.214 -07 000000610 INF: Z Motor: After move to -0.171106, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:12.214 -07 000000610 INF: Z Motor: MoveAbsStepped took 284 ms)
17-03-18 04:17:12.214 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:12.214 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:12.214 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:12.214 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:12.214 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:12.214 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:12.214 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:12.214 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:12.214 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 04:17:12.214 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:12.214 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 04:17:12.214 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:12.224 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:17:12.224 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:17:12.224 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:12.224 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:12.234 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 04:17:12.234 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 04:17:12.234 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:17:12.234 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 04:17:12.244 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 37555 150\n [Camera]
17-03-18 04:17:12.434 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:12.854 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:12.854 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:12.854 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:12.854 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:12.854 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) start.
17-03-18 04:17:12.864 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:12.864 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:12.864 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:12.864 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:12.864 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 04:17:13.054 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37555 803
17-03-18 04:17:13.204 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:13.254 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 04:17:13.264 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 04:17:13.264 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:13.264 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 04:17:13.264 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 04:17:13.264 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:13.264 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:13.264 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 04:17:13.264 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:13.274 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 04:17:13.404 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:13.404 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:13.404 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:13.404 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:13.404 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:13.404 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:13.404 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:13.404 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 04:17:13.414 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:13.414 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 04:17:13.594 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:13.594 -07 000000487 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:13.594 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 37555 150' command took 2 ms to send, 1343 ms to get response, and 1353 ms overall
17-03-18 04:17:13.594 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 04:17:13.594 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56396484375, Z-Position -0.171119597416039. ------
17-03-18 04:17:13.594 -07 000000625 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:17:13.594 -07 000000480 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17737 mm
17-03-18 04:17:13.594 -07 000000480 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:13.604 -07 000000487 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:17:13.604 -07 000000625 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 04:17:13.604 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 04:17:13.604 -07 000000501 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 04:17:13.604 -07 000000625 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:17:13.604 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 38747, sync = True, waitForSettling = False)
17-03-18 04:17:13.604 -07 000000444 INF: Z Motor: Moving to -0.177372 mm, started at -0.171120 mm, distance = -6.25 um
17-03-18 04:17:13.614 -07 000000444 INF: FPGA: Xmit ZDACW 38747\n [Z Motor]
17-03-18 04:17:13.614 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 04:17:13.624 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:13.624 -07 000000444 INF: FPGA: 'ZDACW 38747' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 04:17:13.624 -07 000000447 INF: FPGA: Recv YRDPOS 126083
17-03-18 04:17:13.634 -07 000000501 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 27 ms overall
17-03-18 04:17:13.634 -07 000000501 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:13.634 -07 000000501 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:13.634 -07 000000501 INF: Y Motor: Moving 1342 steps-18
17-03-18 04:17:13.634 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:13.634 -07 000000626 INF: FPGA: Recv ZDACR 38747
17-03-18 04:17:13.644 -07 000000444 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 04:17:13.644 -07 000000444 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-18 04:17:13.644 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:13.784 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 04:17:13.784 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 04:17:13.784 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:13.794 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:13.794 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 04:17:13.794 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 04:17:13.794 -07 000000474 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:13.794 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:13.794 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 04:17:13.794 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 04:17:13.804 -07 000000012 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:17:13.804 -07 000000625 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-18 04:17:14.014 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 04:17:14.014 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 04:17:14.064 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:14.074 -07 000000447 INF: FPGA: Recv YRDPOS 127786
17-03-18 04:17:14.084 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:14.084 -07 000000501 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:14.084 -07 000000501 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 04:17:14.084 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.839 mm, average velocity = 2.167 mm/sec
17-03-18 04:17:15.034 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:15.034 -07 000000012 INF: FPGA: Recv YRDPOS 127786
17-03-18 04:17:15.044 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:15.044 -07 000000501 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:15.064 -07 000000501 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:15.064 -07 000000501 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:15.064 -07 000000501 INF: Y Motor: Moved to 62.3955 after 1467 ms (table move)
17-03-18 04:17:15.074 -07 000000480 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177372 mm (DAC = 38747)
17-03-18 04:17:15.074 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:15.074 -07 000000585 INF: FPGA: Recv ZSGSRD 36898
17-03-18 04:17:15.084 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:17:15.084 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:15.084 -07 000000626 INF: FPGA: Recv ZSGSRD 36905
17-03-18 04:17:15.094 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.094 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:15.094 -07 000000438 INF: FPGA: Recv ZSGSRD 36902
17-03-18 04:17:15.104 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.104 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:15.104 -07 000000561 INF: FPGA: Recv ZSGSRD 36893
17-03-18 04:17:15.114 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.114 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:15.114 -07 000000501 INF: FPGA: Recv ZSGSRD 36895
17-03-18 04:17:15.124 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.124 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:15.124 -07 000000585 INF: FPGA: Recv ZSGSRD 36900
17-03-18 04:17:15.134 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.134 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:15.134 -07 000000561 INF: FPGA: Recv ZSGSRD 36897
17-03-18 04:17:15.144 -07 000000480 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.144 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:15.144 -07 000000626 INF: FPGA: Recv ZSGSRD 36900
17-03-18 04:17:15.154 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.154 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:15.154 -07 000000487 INF: FPGA: Recv ZSGSRD 36906
17-03-18 04:17:15.164 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.164 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:15.164 -07 000000618 INF: FPGA: Recv ZSGSRD 36908
17-03-18 04:17:15.174 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.174 -07 000000480 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:15.174 -07 000000590 INF: FPGA: Recv ZPIEZORD 33097
17-03-18 04:17:15.184 -07 000000480 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.184 -07 000000480 INF: Z Motor: Piezo is near 50.7 V (nominally 0 to 100 V), expect near 59.1 V, since DAC is at 5.912 V. Piezo Error = -8.4 V.
17-03-18 04:17:15.184 -07 000000480 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.4 um, Read 10 ADC samples: Avg = 36900 (-176.5 uncal um), Error = 0.9 uncal um, Median = 36900 (-176.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 36893 (-176.4 uncal um), Max = 36908 (-176.5 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:17:15.184 -07 000000480 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36900, posNoise = 8, negNoise = 7
17-03-18 04:17:15.184 -07 000000480 INF: Z Motor: After move to -0.177372, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:15.184 -07 000000480 INF: Z Motor: Settle wait time = 1470 ms, measure time = 107 ms (allowed 150 ms), total time = 1577 ms
17-03-18 04:17:15.184 -07 000000480 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:15.234 -07 000000480 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1631 ms
17-03-18 04:17:15.234 -07 000000480 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:15.234 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:15.234 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:15.234 -07 000000474 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:15.234 -07 000000437 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:15.234 -07 000000447 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:17:15.234 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:15.234 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 04:17:15.234 -07 000000447 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:17:15.244 -07 000000447 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:17:15.244 -07 000000447 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:17:15.244 -07 000000447 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 04:17:15.244 -07 000000447 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-18 04:17:15.244 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:17:15.294 -07 000000561 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:17:15.594 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:17:15.594 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:17:15.594 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:17:15.594 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 675221432, 0x0, 559484976) start.
17-03-18 04:17:15.634 -07 000000012 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:17:15.634 -07 000000447 INF: FPGA: Recv CAMSNAP
17-03-18 04:17:15.634 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 374 ms to get response, and 384 ms overall
17-03-18 04:17:15.724 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 675221432, 0x0, 559484976) end. Duration was 128 ms.
17-03-18 04:17:15.724 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:15.724 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 04:17:15.724 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-18 04:17:15.734 -07 000000611 INF: Autofocus start
17-03-18 04:17:15.734 -07 000000611 INF: MeasureProfile start
17-03-18 04:17:15.734 -07 000000438 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:17:15.734 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:17:15.744 -07 000000438 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:17:15.744 -07 000000438 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:17:15.744 -07 000000611 INF: MeasureProfile done
17-03-18 04:17:15.744 -07 000000611 INF: X=0  Z correction [um]=-0.0713522
17-03-18 04:17:15.744 -07 000000611 INF: Autofocus finished
17-03-18 04:17:15.944 -07 000000455 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:17:15.944 -07 000000438 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 04:17:15.944 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.177376780042114. ----------
17-03-18 04:17:15.944 -07 000000610 INF: Cycle	123	Tile	4	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:15.954 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37244, sync = True, waitForSettling = True)
17-03-18 04:17:15.954 -07 000000610 INF: Z Motor: Moving to -0.170492 mm, started at -0.177377 mm, distance = 6.88 um
17-03-18 04:17:15.954 -07 000000610 INF: FPGA: Xmit ZDACW 37244\n [Z Motor]
17-03-18 04:17:15.954 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 04:17:15.964 -07 000000610 INF: FPGA: 'ZDACW 37244' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.964 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:15.964 -07 000000561 INF: FPGA: Recv ZDACR 37244
17-03-18 04:17:15.974 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:15.974 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:16.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:16.124 -07 000000585 INF: FPGA: Recv ZSGSRD 35831
17-03-18 04:17:16.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:16.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:16.134 -07 000000501 INF: FPGA: Recv ZSGSRD 35837
17-03-18 04:17:16.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:16.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:16.144 -07 000000444 INF: FPGA: Recv ZSGSRD 35827
17-03-18 04:17:16.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:16.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:16.154 -07 000000437 INF: FPGA: Recv ZSGSRD 35827
17-03-18 04:17:16.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:16.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:16.164 -07 000000438 INF: FPGA: Recv ZSGSRD 35829
17-03-18 04:17:16.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:16.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:16.174 -07 000000480 INF: FPGA: Recv ZSGSRD 35836
17-03-18 04:17:16.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:16.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:16.184 -07 000000501 INF: FPGA: Recv ZSGSRD 35833
17-03-18 04:17:16.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:16.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:16.194 -07 000000444 INF: FPGA: Recv ZSGSRD 35830
17-03-18 04:17:16.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:16.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:16.204 -07 000000590 INF: FPGA: Recv ZSGSRD 35832
17-03-18 04:17:16.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:16.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:16.214 -07 000000447 INF: FPGA: Recv ZSGSRD 35834
17-03-18 04:17:16.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:16.224 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:16.224 -07 000000012 INF: FPGA: Recv ZPIEZORD 31628
17-03-18 04:17:16.234 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:16.234 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.683 V. Piezo Error = -9.3 V.
17-03-18 04:17:16.234 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35832 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35832 (-169.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35827 (-169.6 uncal um), Max = 35837 (-169.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:17:16.234 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35832, posNoise = 5, negNoise = 5
17-03-18 04:17:16.234 -07 000000610 INF: Z Motor: After move to -0.170492, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:16.234 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 04:17:16.234 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:16.234 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:16.234 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:16.234 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:16.234 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:16.234 -07 000000585 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:16.234 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:16.234 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:16.234 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 04:17:16.234 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:16.234 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 04:17:16.234 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:16.244 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:17:16.244 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:16.244 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:17:16.244 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:16.254 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 04:17:16.254 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 04:17:16.254 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 04:17:16.254 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 04:17:16.254 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 37421 150\n [Camera]
17-03-18 04:17:16.454 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:16.654 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:16.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:16.874 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:16.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:16.874 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:16.874 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:16.874 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 2302985888, 0x0, 391868352) start.
17-03-18 04:17:16.874 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:16.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:16.874 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:16.874 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:16.874 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2338408152, 0x0, 418435064) start.
17-03-18 04:17:16.944 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.997626,
17-03-18 04:17:17.064 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37421 803
17-03-18 04:17:17.214 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning grn on 956
17-03-18 04:17:17.244 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2338408152, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 04:17:17.244 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 04:17:17.244 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:17.244 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 2302985888, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 04:17:17.244 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 04:17:17.244 -07 000000479 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:17.254 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:17.254 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:17.254 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 04:17:17.374 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 504 ms.
17-03-18 04:17:17.414 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1156
17-03-18 04:17:17.414 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1156
17-03-18 04:17:17.414 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:17.414 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1156
17-03-18 04:17:17.414 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1156
17-03-18 04:17:17.414 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:17.424 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:17.424 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 04:17:17.424 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:17.424 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 04:17:17.604 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:17.604 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:17.604 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 37421 150' command took 2 ms to send, 1345 ms to get response, and 1353 ms overall
17-03-18 04:17:17.604 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171093
17-03-18 04:17:17.604 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17109 mm
17-03-18 04:17:17.604 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:17.614 -07 000000625 INF: Z Motor: Entering MoveAbsStepped (DAC = 37375, sync = True, waitForSettling = False)
17-03-18 04:17:17.614 -07 000000625 INF: Z Motor: Moving to -0.171092 mm, started at -0.170516 mm, distance = -0.58 um
17-03-18 04:17:17.614 -07 000000625 INF: FPGA: Xmit ZDACW 37375\n [Z Motor]
17-03-18 04:17:17.614 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 04:17:17.614 -07 000000501 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 04:17:17.614 -07 000000479 INF: FPGA: Recv ZDACW
17-03-18 04:17:17.624 -07 000000625 INF: FPGA: 'ZDACW 37375' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:17:17.624 -07 000000625 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:17.624 -07 000000438 INF: FPGA: Recv ZDACR 37375
17-03-18 04:17:17.634 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:17.634 -07 000000625 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:17.634 -07 000000625 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet))
17-03-18 04:17:17.634 -07 000000447 INF: FPGA: Recv YRDPOS 127786
17-03-18 04:17:17.644 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 04:17:17.644 -07 000000501 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:17.644 -07 000000501 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:17.644 -07 000000501 INF: Y Motor: Moving 1339 steps-15
17-03-18 04:17:17.644 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:17.804 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 04:17:17.804 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 04:17:17.804 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:17.804 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 04:17:17.804 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 04:17:17.804 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:17.814 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:17.814 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:17.814 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 04:17:17.814 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 04:17:18.014 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 04:17:18.014 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-18 04:17:18.064 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:18.074 -07 000000618 INF: FPGA: Recv YRDPOS 129483
17-03-18 04:17:18.074 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 04:17:18.074 -07 000000501 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:18.074 -07 000000501 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 04:17:18.074 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 379 ms, distance = 0.837 mm, average velocity = 2.209 mm/sec
17-03-18 04:17:19.024 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:19.024 -07 000000608 INF: FPGA: Recv YRDPOS 129483
17-03-18 04:17:19.034 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:19.034 -07 000000501 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:19.054 -07 000000501 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:19.054 -07 000000501 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:19.054 -07 000000501 INF: Y Motor: Moved to 63.2241 after 1445 ms (table move)
17-03-18 04:17:19.064 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171092 mm (DAC = 37375)
17-03-18 04:17:19.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.064 -07 000000487 INF: FPGA: Recv ZSGSRD 35919
17-03-18 04:17:19.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:17:19.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.074 -07 000000618 INF: FPGA: Recv ZSGSRD 35925
17-03-18 04:17:19.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.084 -07 000000512 INF: FPGA: Recv ZSGSRD 35927
17-03-18 04:17:19.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.094 -07 000000590 INF: FPGA: Recv ZSGSRD 35932
17-03-18 04:17:19.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.104 -07 000000444 INF: FPGA: Recv ZSGSRD 35915
17-03-18 04:17:19.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.114 -07 000000487 INF: FPGA: Recv ZSGSRD 35925
17-03-18 04:17:19.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.124 -07 000000474 INF: FPGA: Recv ZSGSRD 35917
17-03-18 04:17:19.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.134 -07 000000487 INF: FPGA: Recv ZSGSRD 35920
17-03-18 04:17:19.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.144 -07 000000579 INF: FPGA: Recv ZSGSRD 35922
17-03-18 04:17:19.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.154 -07 000000561 INF: FPGA: Recv ZSGSRD 35927
17-03-18 04:17:19.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.164 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:19.164 -07 000000579 INF: FPGA: Recv ZPIEZORD 31802
17-03-18 04:17:19.174 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.174 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.703 V. Piezo Error = -9.1 V.
17-03-18 04:17:19.174 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35923 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35924 (-170.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35915 (-170.2 uncal um), Max = 35932 (-170.3 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 04:17:19.174 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35923, posNoise = 9, negNoise = 8
17-03-18 04:17:19.174 -07 000000610 INF: Z Motor: After move to -0.171092, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:19.174 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 109 ms (allowed 150 ms), total time = 1557 ms
17-03-18 04:17:19.174 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:19.224 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-18 04:17:19.224 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:19.224 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.171100324779614. ----------
17-03-18 04:17:19.224 -07 000000610 INF: Cycle	123	Tile	5	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:19.224 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37199, sync = True, waitForSettling = True)
17-03-18 04:17:19.224 -07 000000610 INF: Z Motor: Moving to -0.170286 mm, started at -0.171100 mm, distance = 0.81 um
17-03-18 04:17:19.224 -07 000000610 INF: FPGA: Xmit ZDACW 37199\n [Z Motor]
17-03-18 04:17:19.224 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 04:17:19.234 -07 000000610 INF: FPGA: 'ZDACW 37199' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:17:19.234 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:19.234 -07 000000501 INF: FPGA: Recv ZDACR 37199
17-03-18 04:17:19.244 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.244 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:19.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.394 -07 000000437 INF: FPGA: Recv ZSGSRD 35800
17-03-18 04:17:19.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:19.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.404 -07 000000444 INF: FPGA: Recv ZSGSRD 35805
17-03-18 04:17:19.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.414 -07 000000487 INF: FPGA: Recv ZSGSRD 35804
17-03-18 04:17:19.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.424 -07 000000455 INF: FPGA: Recv ZSGSRD 35794
17-03-18 04:17:19.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.434 -07 000000501 INF: FPGA: Recv ZSGSRD 35798
17-03-18 04:17:19.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.444 -07 000000590 INF: FPGA: Recv ZSGSRD 35798
17-03-18 04:17:19.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.454 -07 000000512 INF: FPGA: Recv ZSGSRD 35796
17-03-18 04:17:19.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.464 -07 000000561 INF: FPGA: Recv ZSGSRD 35801
17-03-18 04:17:19.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.474 -07 000000474 INF: FPGA: Recv ZSGSRD 35800
17-03-18 04:17:19.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:19.484 -07 000000501 INF: FPGA: Recv ZSGSRD 35799
17-03-18 04:17:19.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:19.494 -07 000000590 INF: FPGA: Recv ZPIEZORD 31612
17-03-18 04:17:19.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:19.504 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.676 V. Piezo Error = -9.2 V.
17-03-18 04:17:19.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.3 um, Read 10 ADC samples: Avg = 35800 (-169.4 uncal um), Error = 0.9 uncal um, Median = 35800 (-169.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35794 (-169.4 uncal um), Max = 35805 (-169.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:17:19.504 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35800, posNoise = 5, negNoise = 6
17-03-18 04:17:19.504 -07 000000610 INF: Z Motor: After move to -0.170286, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:19.504 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 04:17:19.504 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:19.504 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:19.504 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:19.504 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:19.504 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:19.504 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:19.504 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:19.504 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:19.504 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:19.504 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:19.504 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:19.504 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:19.514 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 04:17:19.514 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:19.514 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 04:17:19.514 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:19.524 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 04:17:19.524 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 04:17:19.524 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 04:17:19.524 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 04:17:19.524 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 37375 150\n [Camera]
17-03-18 04:17:19.724 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:20.144 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:20.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:20.144 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:20.144 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:20.144 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) start.
17-03-18 04:17:20.144 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:20.144 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:20.144 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:20.144 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:20.144 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) start.
17-03-18 04:17:20.334 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37375 803
17-03-18 04:17:20.484 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:20.524 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 04:17:20.524 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 04:17:20.524 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:20.524 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 04:17:20.524 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 04:17:20.524 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:20.524 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:20.524 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 04:17:20.524 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:20.534 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 04:17:20.684 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:20.684 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:20.684 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:20.684 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:20.684 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2369425112, 0x0, 391868352) start.
17-03-18 04:17:20.684 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:20.684 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:20.684 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:20.814 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:20.814 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 04:17:20.874 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:17:20.874 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:20.874 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 37375 150' command took 2 ms to send, 1347 ms to get response, and 1353 ms overall
17-03-18 04:17:20.874 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.170365
17-03-18 04:17:20.874 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17037 mm
17-03-18 04:17:20.884 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:20.884 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 37216, sync = True, waitForSettling = False)
17-03-18 04:17:20.884 -07 000000579 INF: Z Motor: Moving to -0.170364 mm, started at -0.170310 mm, distance = -0.05 um
17-03-18 04:17:20.884 -07 000000579 INF: FPGA: Xmit ZDACW 37216\n [Z Motor]
17-03-18 04:17:20.884 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 04:17:20.884 -07 000000561 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 04:17:20.884 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 04:17:20.894 -07 000000579 INF: FPGA: 'ZDACW 37216' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:17:20.894 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:20.894 -07 000000480 INF: FPGA: Recv ZDACR 37216
17-03-18 04:17:20.904 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:20.904 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:20.904 -07 000000579 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet))
17-03-18 04:17:20.904 -07 000000012 INF: FPGA: Recv YRDPOS 129483
17-03-18 04:17:20.914 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 04:17:20.914 -07 000000561 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:20.914 -07 000000561 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:20.914 -07 000000561 INF: Y Motor: Moving 1342 steps-17
17-03-18 04:17:20.914 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:21.074 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2369425112, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 04:17:21.074 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 04:17:21.074 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:21.074 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:21.074 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 04:17:21.184 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 04:17:21.184 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 04:17:21.184 -07 000000474 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:21.194 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:21.194 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 508 ms.
17-03-18 04:17:21.284 -07 000000585 INF: FPGA: Recv YMVTILE
17-03-18 04:17:21.284 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-18 04:17:21.334 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:21.344 -07 000000438 INF: FPGA: Recv YRDPOS 131189
17-03-18 04:17:21.344 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 04:17:21.344 -07 000000561 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:21.344 -07 000000561 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-18 04:17:21.344 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 379 ms, distance = 0.838 mm, average velocity = 2.212 mm/sec
17-03-18 04:17:21.654 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:21.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:22.304 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:22.304 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.978563,
17-03-18 04:17:22.304 -07 000000012 INF: FPGA: Recv YRDPOS 131189
17-03-18 04:17:22.314 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:22.314 -07 000000561 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:22.334 -07 000000561 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:22.334 -07 000000561 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:22.334 -07 000000561 INF: Y Motor: Moved to 64.0571 after 1454 ms (table move)
17-03-18 04:17:22.344 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170364 mm (DAC = 37216)
17-03-18 04:17:22.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.354 -07 000000438 INF: FPGA: Recv ZSGSRD 35812
17-03-18 04:17:22.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 04:17:22.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.364 -07 000000561 INF: FPGA: Recv ZSGSRD 35808
17-03-18 04:17:22.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.374 -07 000000501 INF: FPGA: Recv ZSGSRD 35803
17-03-18 04:17:22.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.384 -07 000000480 INF: FPGA: Recv ZSGSRD 35812
17-03-18 04:17:22.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.394 -07 000000618 INF: FPGA: Recv ZSGSRD 35810
17-03-18 04:17:22.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.404 -07 000000608 INF: FPGA: Recv ZSGSRD 35811
17-03-18 04:17:22.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.414 -07 000000487 INF: FPGA: Recv ZSGSRD 35799
17-03-18 04:17:22.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.424 -07 000000501 INF: FPGA: Recv ZSGSRD 35816
17-03-18 04:17:22.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.434 -07 000000626 INF: FPGA: Recv ZSGSRD 35811
17-03-18 04:17:22.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.444 -07 000000611 INF: FPGA: Recv ZSGSRD 35807
17-03-18 04:17:22.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.454 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:22.454 -07 000000437 INF: FPGA: Recv ZPIEZORD 31632
17-03-18 04:17:22.464 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.464 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.679 V. Piezo Error = -9.2 V.
17-03-18 04:17:22.464 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35809 (-169.5 uncal um), Error = 0.9 uncal um, Median = 35810 (-169.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35799 (-169.4 uncal um), Max = 35816 (-169.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 04:17:22.464 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35809, posNoise = 7, negNoise = 10
17-03-18 04:17:22.464 -07 000000610 INF: Z Motor: After move to -0.170364, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:22.464 -07 000000610 INF: Z Motor: Settle wait time = 1459 ms, measure time = 118 ms (allowed 150 ms), total time = 1577 ms
17-03-18 04:17:22.464 -07 000000610 INF: Z Motor: Waiting extra 32 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:22.504 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1620 ms
17-03-18 04:17:22.504 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:22.504 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.170367964595453. ----------
17-03-18 04:17:22.504 -07 000000610 INF: Cycle	123	Tile	6	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:22.504 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37040, sync = True, waitForSettling = True)
17-03-18 04:17:22.504 -07 000000610 INF: Z Motor: Moving to -0.169558 mm, started at -0.170368 mm, distance = 0.81 um
17-03-18 04:17:22.504 -07 000000610 INF: FPGA: Xmit ZDACW 37040\n [Z Motor]
17-03-18 04:17:22.504 -07 000000625 INF: FPGA: Recv ZDACW
17-03-18 04:17:22.514 -07 000000610 INF: FPGA: 'ZDACW 37040' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:17:22.514 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:22.514 -07 000000512 INF: FPGA: Recv ZDACR 37040
17-03-18 04:17:22.524 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.524 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:22.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.674 -07 000000474 INF: FPGA: Recv ZSGSRD 35678
17-03-18 04:17:22.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:22.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.684 -07 000000611 INF: FPGA: Recv ZSGSRD 35689
17-03-18 04:17:22.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.694 -07 000000480 INF: FPGA: Recv ZSGSRD 35678
17-03-18 04:17:22.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.704 -07 000000625 INF: FPGA: Recv ZSGSRD 35680
17-03-18 04:17:22.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.714 -07 000000585 INF: FPGA: Recv ZSGSRD 35684
17-03-18 04:17:22.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.724 -07 000000479 INF: FPGA: Recv ZSGSRD 35684
17-03-18 04:17:22.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.744 -07 000000447 INF: FPGA: Recv ZSGSRD 35687
17-03-18 04:17:22.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:22.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.754 -07 000000012 INF: FPGA: Recv ZSGSRD 35678
17-03-18 04:17:22.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.764 -07 000000561 INF: FPGA: Recv ZSGSRD 35688
17-03-18 04:17:22.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:22.774 -07 000000512 INF: FPGA: Recv ZSGSRD 35681
17-03-18 04:17:22.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.784 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:22.784 -07 000000455 INF: FPGA: Recv ZPIEZORD 31492
17-03-18 04:17:22.794 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:22.794 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.652 V. Piezo Error = -9.2 V.
17-03-18 04:17:22.794 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.6 um, Read 10 ADC samples: Avg = 35683 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35682 (-168.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35678 (-168.7 uncal um), Max = 35689 (-168.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:17:22.794 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35683, posNoise = 6, negNoise = 5
17-03-18 04:17:22.794 -07 000000610 INF: Z Motor: After move to -0.169558, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:22.794 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-18 04:17:22.794 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:22.794 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:22.794 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:22.794 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:22.794 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:22.794 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:22.794 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:22.794 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:22.794 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:22.794 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:22.794 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:22.794 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:22.804 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:17:22.804 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:22.804 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 04:17:22.804 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:22.814 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 04:17:22.814 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:17:22.814 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:17:22.814 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 04:17:22.814 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 37216 150\n [Camera]
17-03-18 04:17:23.014 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:23.434 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:23.434 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:23.434 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:23.434 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:23.444 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:23.444 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:23.444 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:23.444 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) start.
17-03-18 04:17:23.454 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:23.454 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) start.
17-03-18 04:17:23.624 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37216 803
17-03-18 04:17:23.774 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:23.814 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 04:17:23.824 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 04:17:23.824 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:23.824 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 04:17:23.824 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 04:17:23.824 -07 000000479 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:23.824 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:23.824 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 04:17:23.824 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:23.834 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 04:17:23.984 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:23.984 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:23.984 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:23.984 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:23.984 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 04:17:23.984 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:23.984 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:23.984 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:23.984 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:23.984 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1111624864, 0x0, 418435064) start.
17-03-18 04:17:24.174 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:17:24.174 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:24.174 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 37216 150' command took 2 ms to send, 1342 ms to get response, and 1353 ms overall
17-03-18 04:17:24.174 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.169962
17-03-18 04:17:24.174 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.16996 mm
17-03-18 04:17:24.174 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:24.174 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 04:17:24.174 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 37128, sync = True, waitForSettling = False)
17-03-18 04:17:24.174 -07 000000561 INF: Z Motor: Moving to -0.169961 mm, started at -0.169559 mm, distance = -0.40 um
17-03-18 04:17:24.174 -07 000000561 INF: FPGA: Xmit ZDACW 37128\n [Z Motor]
17-03-18 04:17:24.174 -07 000000012 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 04:17:24.184 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 04:17:24.184 -07 000000561 INF: FPGA: 'ZDACW 37128' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 04:17:24.184 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:24.184 -07 000000437 INF: FPGA: Recv YRDPOS 131189
17-03-18 04:17:24.194 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 04:17:24.194 -07 000000012 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:24.194 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:24.194 -07 000000012 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:24.194 -07 000000012 INF: Y Motor: Moving 1337 steps-11
17-03-18 04:17:24.194 -07 000000438 INF: FPGA: Recv ZDACR 37128
17-03-18 04:17:24.204 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:24.204 -07 000000561 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 04:17:24.204 -07 000000012 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:24.364 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 04:17:24.364 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 04:17:24.364 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:24.364 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1111624864, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 04:17:24.364 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 04:17:24.364 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:24.364 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:24.364 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 04:17:24.364 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:24.374 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 04:17:24.574 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 04:17:24.574 -07 000000012 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 04:17:24.624 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:24.624 -07 000000455 INF: FPGA: Recv YRDPOS 132872
17-03-18 04:17:24.634 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:17:24.634 -07 000000012 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:24.634 -07 000000012 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 04:17:24.634 -07 000000012 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.835 mm, average velocity = 2.153 mm/sec
17-03-18 04:17:25.584 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:25.584 -07 000000585 INF: FPGA: Recv YRDPOS 132872
17-03-18 04:17:25.594 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:25.594 -07 000000012 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:25.624 -07 000000012 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:25.624 -07 000000012 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:25.624 -07 000000012 INF: Y Motor: Moved to 64.8789 after 1443 ms (table move)
17-03-18 04:17:25.624 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169961 mm (DAC = 37128)
17-03-18 04:17:25.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.624 -07 000000626 INF: FPGA: Recv ZSGSRD 35751
17-03-18 04:17:25.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:17:25.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.634 -07 000000590 INF: FPGA: Recv ZSGSRD 35744
17-03-18 04:17:25.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.644 -07 000000512 INF: FPGA: Recv ZSGSRD 35749
17-03-18 04:17:25.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.654 -07 000000487 INF: FPGA: Recv ZSGSRD 35750
17-03-18 04:17:25.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.664 -07 000000561 INF: FPGA: Recv ZSGSRD 35753
17-03-18 04:17:25.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.674 -07 000000487 INF: FPGA: Recv ZSGSRD 35746
17-03-18 04:17:25.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.684 -07 000000447 INF: FPGA: Recv ZSGSRD 35744
17-03-18 04:17:25.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.694 -07 000000512 INF: FPGA: Recv ZSGSRD 35742
17-03-18 04:17:25.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.704 -07 000000455 INF: FPGA: Recv ZSGSRD 35745
17-03-18 04:17:25.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.714 -07 000000626 INF: FPGA: Recv ZSGSRD 35744
17-03-18 04:17:25.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:25.724 -07 000000579 INF: FPGA: Recv ZPIEZORD 31569
17-03-18 04:17:25.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.734 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.665 V. Piezo Error = -9.2 V.
17-03-18 04:17:25.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35747 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35746 (-169.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35742 (-169.1 uncal um), Max = 35753 (-169.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:17:25.734 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35747, posNoise = 6, negNoise = 5
17-03-18 04:17:25.734 -07 000000610 INF: Z Motor: After move to -0.169961, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:25.734 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 107 ms (allowed 150 ms), total time = 1552 ms
17-03-18 04:17:25.734 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:25.784 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 04:17:25.784 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:25.784 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.169969663442664. ----------
17-03-18 04:17:25.784 -07 000000610 INF: Cycle	123	Tile	7	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:25.784 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36951, sync = True, waitForSettling = True)
17-03-18 04:17:25.784 -07 000000610 INF: Z Motor: Moving to -0.169151 mm, started at -0.169970 mm, distance = 0.82 um
17-03-18 04:17:25.784 -07 000000610 INF: FPGA: Xmit ZDACW 36951\n [Z Motor]
17-03-18 04:17:25.784 -07 000000585 INF: FPGA: Recv ZDACW
17-03-18 04:17:25.794 -07 000000610 INF: FPGA: 'ZDACW 36951' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:17:25.794 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:25.794 -07 000000487 INF: FPGA: Recv ZDACR 36951
17-03-18 04:17:25.804 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.804 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:25.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.954 -07 000000611 INF: FPGA: Recv ZSGSRD 35620
17-03-18 04:17:25.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:25.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.964 -07 000000501 INF: FPGA: Recv ZSGSRD 35626
17-03-18 04:17:25.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.974 -07 000000611 INF: FPGA: Recv ZSGSRD 35618
17-03-18 04:17:25.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.984 -07 000000474 INF: FPGA: Recv ZSGSRD 35622
17-03-18 04:17:25.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:25.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:25.994 -07 000000480 INF: FPGA: Recv ZSGSRD 35623
17-03-18 04:17:26.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:26.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:26.004 -07 000000437 INF: FPGA: Recv ZSGSRD 35620
17-03-18 04:17:26.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:26.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:26.014 -07 000000487 INF: FPGA: Recv ZSGSRD 35617
17-03-18 04:17:26.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:26.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:26.024 -07 000000455 INF: FPGA: Recv ZSGSRD 35617
17-03-18 04:17:26.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:26.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:26.034 -07 000000012 INF: FPGA: Recv ZSGSRD 35624
17-03-18 04:17:26.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:26.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:26.044 -07 000000479 INF: FPGA: Recv ZSGSRD 35619
17-03-18 04:17:26.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:26.054 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:26.054 -07 000000611 INF: FPGA: Recv ZPIEZORD 31384
17-03-18 04:17:26.064 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:26.064 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.638 V. Piezo Error = -9.3 V.
17-03-18 04:17:26.064 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.2 um, Read 10 ADC samples: Avg = 35621 (-168.3 uncal um), Error = 0.9 uncal um, Median = 35620 (-168.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35617 (-168.3 uncal um), Max = 35626 (-168.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 04:17:26.064 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35621, posNoise = 5, negNoise = 4
17-03-18 04:17:26.064 -07 000000610 INF: Z Motor: After move to -0.169151, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:26.064 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 04:17:26.064 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:26.064 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:26.064 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:26.064 -07 000000625 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:26.064 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:26.064 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:26.064 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:26.064 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:26.064 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:26.064 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:26.064 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:26.064 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:26.074 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:17:26.074 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:26.074 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 04:17:26.074 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:26.084 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:17:26.084 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:17:26.084 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 04:17:26.084 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 04:17:26.094 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 37128 150\n [Camera]
17-03-18 04:17:26.294 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:26.654 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:26.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:26.704 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:26.704 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:26.704 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:26.714 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:26.714 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) start.
17-03-18 04:17:26.714 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:26.714 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:26.714 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:26.714 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:26.714 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 04:17:26.904 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37128 806
17-03-18 04:17:27.054 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:27.084 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 04:17:27.084 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 04:17:27.084 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:27.084 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 04:17:27.084 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 04:17:27.084 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:27.094 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:27.094 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 04:17:27.094 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:27.104 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 04:17:27.254 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:27.254 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:27.254 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:27.254 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:27.254 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 04:17:27.254 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:27.254 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:27.254 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:27.254 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:27.254 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 04:17:27.444 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:27.444 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:27.444 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 37128 150' command took 2 ms to send, 1344 ms to get response, and 1353 ms overall
17-03-18 04:17:27.444 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 04:17:27.444 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87890625, Z-Position -0.169160212712802. ------
17-03-18 04:17:27.444 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:17:27.444 -07 000000480 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17571 mm
17-03-18 04:17:27.444 -07 000000480 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:27.454 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:17:27.454 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 04:17:27.454 -07 000000474 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 04:17:27.454 -07 000000474 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-18 04:17:27.454 -07 000000444 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:17:27.454 -07 000000012 INF: Z Motor: Entering MoveAbsStepped (DAC = 38383, sync = True, waitForSettling = False)
17-03-18 04:17:27.454 -07 000000012 INF: Z Motor: Moving to -0.175706 mm, started at -0.169160 mm, distance = -6.55 um
17-03-18 04:17:27.464 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:27.464 -07 000000585 INF: FPGA: Recv YRDPOS 132872
17-03-18 04:17:27.474 -07 000000012 INF: FPGA: Xmit ZDACW 38383\n [Z Motor]
17-03-18 04:17:27.474 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 04:17:27.474 -07 000000474 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:27.474 -07 000000474 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:27.474 -07 000000474 INF: Y Motor: Moving 1350 steps-28
17-03-18 04:17:27.474 -07 000000625 INF: FPGA: Recv ZDACW
17-03-18 04:17:27.484 -07 000000012 INF: FPGA: 'ZDACW 38383' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 04:17:27.484 -07 000000474 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:27.494 -07 000000012 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:27.494 -07 000000625 INF: FPGA: Recv ZDACR 38383
17-03-18 04:17:27.504 -07 000000012 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:27.504 -07 000000012 INF: Z Motor: MoveAbsStepped took 46 ms (did NOT wait for settling yet))
17-03-18 04:17:27.634 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 04:17:27.634 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 04:17:27.634 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:27.634 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 04:17:27.634 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 04:17:27.634 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:27.644 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:27.644 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:27.644 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 04:17:27.644 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 04:17:27.654 -07 000000590 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:17:27.654 -07 000000444 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 196 ms to get response, and 202 ms overall
17-03-18 04:17:27.674 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.96762,
17-03-18 04:17:27.854 -07 000000611 INF: FPGA: Recv YMVTILE
17-03-18 04:17:27.854 -07 000000474 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 04:17:27.904 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:27.914 -07 000000611 INF: FPGA: Recv YRDPOS 134582
17-03-18 04:17:27.914 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 04:17:27.914 -07 000000474 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:27.914 -07 000000474 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 04:17:27.914 -07 000000474 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.844 mm, average velocity = 2.180 mm/sec
17-03-18 04:17:28.864 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:28.864 -07 000000438 INF: FPGA: Recv YRDPOS 134583
17-03-18 04:17:28.874 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:28.874 -07 000000474 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:28.904 -07 000000474 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:28.904 -07 000000474 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 04:17:28.904 -07 000000474 INF: Y Motor: Moved to 65.7144 after 1451 ms (table move)
17-03-18 04:17:28.904 -07 000000480 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175706 mm (DAC = 38383)
17-03-18 04:17:28.904 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:28.914 -07 000000561 INF: FPGA: Recv ZSGSRD 36641
17-03-18 04:17:28.914 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 04:17:28.914 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:28.914 -07 000000487 INF: FPGA: Recv ZSGSRD 36642
17-03-18 04:17:28.924 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:17:28.924 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:28.924 -07 000000625 INF: FPGA: Recv ZSGSRD 36641
17-03-18 04:17:28.934 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:28.934 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:28.934 -07 000000447 INF: FPGA: Recv ZSGSRD 36642
17-03-18 04:17:28.944 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:28.944 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:28.944 -07 000000611 INF: FPGA: Recv ZSGSRD 36646
17-03-18 04:17:28.954 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:28.954 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:28.954 -07 000000561 INF: FPGA: Recv ZSGSRD 36639
17-03-18 04:17:28.964 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:28.964 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:28.964 -07 000000444 INF: FPGA: Recv ZSGSRD 36637
17-03-18 04:17:28.974 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:28.974 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:28.974 -07 000000512 INF: FPGA: Recv ZSGSRD 36643
17-03-18 04:17:28.984 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:28.984 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:28.984 -07 000000618 INF: FPGA: Recv ZSGSRD 36642
17-03-18 04:17:28.994 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:28.994 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:28.994 -07 000000012 INF: FPGA: Recv ZSGSRD 36639
17-03-18 04:17:29.004 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:29.004 -07 000000480 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:29.004 -07 000000501 INF: FPGA: Recv ZPIEZORD 32737
17-03-18 04:17:29.014 -07 000000480 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:29.014 -07 000000480 INF: Z Motor: Piezo is near 49.9 V (nominally 0 to 100 V), expect near 58.6 V, since DAC is at 5.857 V. Piezo Error = -8.6 V.
17-03-18 04:17:29.014 -07 000000480 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.7 um, Read 10 ADC samples: Avg = 36641 (-174.8 uncal um), Error = 0.9 uncal um, Median = 36642 (-174.8 uncal um), StdDev = 2 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 36637 (-174.8 uncal um), Max = 36646 (-174.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 04:17:29.014 -07 000000480 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36641, posNoise = 5, negNoise = 4
17-03-18 04:17:29.014 -07 000000480 INF: Z Motor: After move to -0.175706, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:29.014 -07 000000480 INF: Z Motor: Settle wait time = 1455 ms, measure time = 102 ms (allowed 150 ms), total time = 1557 ms
17-03-18 04:17:29.014 -07 000000480 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:29.064 -07 000000480 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1610 ms
17-03-18 04:17:29.064 -07 000000480 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:29.064 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:29.064 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:29.064 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:29.064 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:29.064 -07 000000585 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:17:29.064 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:29.064 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:29.064 -07 000000585 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:17:29.074 -07 000000585 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:17:29.074 -07 000000585 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:17:29.084 -07 000000585 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 04:17:29.084 -07 000000585 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-18 04:17:29.084 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:17:29.124 -07 000000512 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:17:29.424 -07 000000012 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:17:29.424 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:17:29.434 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:17:29.564 -07 000000444 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:17:29.564 -07 000000444 INF: FPGA: Recv CAMSNAP
17-03-18 04:17:29.564 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 471 ms to get response, and 476 ms overall
17-03-18 04:17:29.564 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 675221432, 0x0, 559484976) start.
17-03-18 04:17:29.674 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 675221432, 0x0, 559484976) end. Duration was 116 ms.
17-03-18 04:17:29.674 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:29.674 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:17:29.674 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 249 ms.
17-03-18 04:17:29.764 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:17:29.764 -07 000000479 INF: Autofocus start
17-03-18 04:17:29.764 -07 000000479 INF: MeasureProfile start
17-03-18 04:17:29.764 -07 000000625 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:17:29.774 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:17:29.774 -07 000000455 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:17:29.774 -07 000000479 INF: MeasureProfile done
17-03-18 04:17:29.774 -07 000000479 INF: X=48  Z correction [um]=0.1739867
17-03-18 04:17:29.774 -07 000000479 INF: Autofocus finished
17-03-18 04:17:29.974 -07 000000608 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:17:29.974 -07 000000455 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 204 ms overall
17-03-18 04:17:29.974 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.175712909097398. ----------
17-03-18 04:17:29.984 -07 000000610 INF: Cycle	123	Tile	8	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:29.984 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36934, sync = True, waitForSettling = True)
17-03-18 04:17:29.984 -07 000000610 INF: Z Motor: Moving to -0.169073 mm, started at -0.175713 mm, distance = 6.64 um
17-03-18 04:17:29.984 -07 000000610 INF: FPGA: Xmit ZDACW 36934\n [Z Motor]
17-03-18 04:17:29.984 -07 000000479 INF: FPGA: Recv ZDACW
17-03-18 04:17:29.994 -07 000000610 INF: FPGA: 'ZDACW 36934' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:17:29.994 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:29.994 -07 000000608 INF: FPGA: Recv ZDACR 36934
17-03-18 04:17:30.004 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:30.004 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:30.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:30.154 -07 000000487 INF: FPGA: Recv ZSGSRD 35607
17-03-18 04:17:30.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:30.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:30.164 -07 000000447 INF: FPGA: Recv ZSGSRD 35607
17-03-18 04:17:30.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:30.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:30.174 -07 000000474 INF: FPGA: Recv ZSGSRD 35602
17-03-18 04:17:30.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:30.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:30.184 -07 000000579 INF: FPGA: Recv ZSGSRD 35607
17-03-18 04:17:30.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:30.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:30.194 -07 000000608 INF: FPGA: Recv ZSGSRD 35614
17-03-18 04:17:30.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:30.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:30.204 -07 000000444 INF: FPGA: Recv ZSGSRD 35608
17-03-18 04:17:30.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:30.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:30.214 -07 000000561 INF: FPGA: Recv ZSGSRD 35608
17-03-18 04:17:30.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:30.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:30.224 -07 000000487 INF: FPGA: Recv ZSGSRD 35604
17-03-18 04:17:30.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:30.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:30.234 -07 000000447 INF: FPGA: Recv ZSGSRD 35608
17-03-18 04:17:30.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:30.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:30.244 -07 000000590 INF: FPGA: Recv ZSGSRD 35610
17-03-18 04:17:30.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:30.254 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:30.254 -07 000000618 INF: FPGA: Recv ZPIEZORD 31373
17-03-18 04:17:30.264 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:30.264 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.636 V. Piezo Error = -9.3 V.
17-03-18 04:17:30.264 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35608 (-168.2 uncal um), Error = 0.9 uncal um, Median = 35608 (-168.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35602 (-168.2 uncal um), Max = 35614 (-168.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:17:30.264 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35608, posNoise = 6, negNoise = 6
17-03-18 04:17:30.264 -07 000000610 INF: Z Motor: After move to -0.169073, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:30.264 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 04:17:30.264 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:30.264 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:30.264 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:30.264 -07 000000474 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:30.264 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:30.264 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:30.264 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:30.264 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:30.264 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:30.264 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:30.264 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:30.264 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:30.274 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:17:30.274 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:30.274 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:17:30.274 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:30.284 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 04:17:30.284 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 04:17:30.284 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 04:17:30.284 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 04:17:30.284 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 37111 150\n [Camera]
17-03-18 04:17:30.484 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:30.904 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:30.904 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:30.904 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:30.904 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:30.904 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:30.904 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:30.904 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:30.904 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) start.
17-03-18 04:17:30.914 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:30.914 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 04:17:31.094 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37111 803
17-03-18 04:17:31.244 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:31.284 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 04:17:31.284 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 04:17:31.284 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:31.284 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:31.284 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 374 ms.
17-03-18 04:17:31.284 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-18 04:17:31.284 -07 000000474 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:31.294 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:31.294 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 04:17:31.294 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 04:17:31.444 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:31.444 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:31.444 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:31.444 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:31.444 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:31.444 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) start.
17-03-18 04:17:31.444 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:31.444 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:31.444 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:31.444 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) start.
17-03-18 04:17:31.634 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:31.634 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:31.634 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 37111 150' command took 2 ms to send, 1346 ms to get response, and 1353 ms overall
17-03-18 04:17:31.634 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.169588
17-03-18 04:17:31.634 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.16959 mm
17-03-18 04:17:31.634 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:31.754 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:31.764 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 04:17:31.764 -07 000000455 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-18 04:17:31.764 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:31.764 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:31.764 -07 000000474 INF: Z Motor: Entering MoveAbsStepped (DAC = 37046, sync = True, waitForSettling = False)
17-03-18 04:17:31.764 -07 000000474 INF: Z Motor: Moving to -0.169586 mm, started at -0.169077 mm, distance = -0.51 um
17-03-18 04:17:31.764 -07 000000501 INF: FPGA: Recv YRDPOS 134583
17-03-18 04:17:31.774 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:31.774 -07 000000455 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:31.774 -07 000000455 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:31.774 -07 000000455 INF: Y Motor: Moving 1341 steps-18
17-03-18 04:17:31.774 -07 000000474 INF: FPGA: Xmit ZDACW 37046\n [Z Motor]
17-03-18 04:17:31.774 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 04:17:31.784 -07 000000474 INF: FPGA: 'ZDACW 37046' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 04:17:31.784 -07 000000474 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:31.784 -07 000000501 INF: FPGA: Recv ZDACR 37046
17-03-18 04:17:31.794 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:31.794 -07 000000474 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:31.794 -07 000000474 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 04:17:31.834 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) end. Duration was 389 ms.
17-03-18 04:17:31.834 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 04:17:31.834 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:31.834 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) end. Duration was 391 ms.
17-03-18 04:17:31.834 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 04:17:31.834 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:31.844 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:31.844 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:31.844 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 04:17:31.854 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 04:17:32.164 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 04:17:32.164 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 04:17:32.214 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:32.224 -07 000000487 INF: FPGA: Recv YRDPOS 136271
17-03-18 04:17:32.224 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:17:32.224 -07 000000455 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:32.224 -07 000000455 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 04:17:32.224 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.111 mm/sec
17-03-18 04:17:33.034 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.989471,
17-03-18 04:17:33.174 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:33.174 -07 000000437 INF: FPGA: Recv YRDPOS 136272
17-03-18 04:17:33.184 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:33.184 -07 000000455 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:33.214 -07 000000455 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:33.214 -07 000000455 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 04:17:33.214 -07 000000455 INF: Y Motor: Moved to 66.5391 after 1451 ms (table move)
17-03-18 04:17:33.214 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169586 mm (DAC = 37046)
17-03-18 04:17:33.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.214 -07 000000447 INF: FPGA: Recv ZSGSRD 35691
17-03-18 04:17:33.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:17:33.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.224 -07 000000611 INF: FPGA: Recv ZSGSRD 35699
17-03-18 04:17:33.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.234 -07 000000480 INF: FPGA: Recv ZSGSRD 35687
17-03-18 04:17:33.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.244 -07 000000626 INF: FPGA: Recv ZSGSRD 35690
17-03-18 04:17:33.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.254 -07 000000512 INF: FPGA: Recv ZSGSRD 35687
17-03-18 04:17:33.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.264 -07 000000608 INF: FPGA: Recv ZSGSRD 35688
17-03-18 04:17:33.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.274 -07 000000611 INF: FPGA: Recv ZSGSRD 35689
17-03-18 04:17:33.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:33.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.284 -07 000000579 INF: FPGA: Recv ZSGSRD 35680
17-03-18 04:17:33.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.294 -07 000000437 INF: FPGA: Recv ZSGSRD 35690
17-03-18 04:17:33.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.304 -07 000000512 INF: FPGA: Recv ZSGSRD 35681
17-03-18 04:17:33.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.314 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:33.314 -07 000000444 INF: FPGA: Recv ZPIEZORD 31479
17-03-18 04:17:33.324 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.324 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.653 V. Piezo Error = -9.3 V.
17-03-18 04:17:33.324 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.6 um, Read 10 ADC samples: Avg = 35688 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35688 (-168.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 35680 (-168.7 uncal um), Max = 35699 (-168.8 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 04:17:33.324 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35688, posNoise = 11, negNoise = 8
17-03-18 04:17:33.324 -07 000000610 INF: Z Motor: After move to -0.169586, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:33.324 -07 000000610 INF: Z Motor: Settle wait time = 1452 ms, measure time = 107 ms (allowed 150 ms), total time = 1559 ms
17-03-18 04:17:33.324 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:33.374 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1731 ms
17-03-18 04:17:33.374 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:33.374 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.1695906349263. ----------
17-03-18 04:17:33.374 -07 000000610 INF: Cycle	123	Tile	9	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:33.374 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36870, sync = True, waitForSettling = True)
17-03-18 04:17:33.374 -07 000000610 INF: Z Motor: Moving to -0.168780 mm, started at -0.169591 mm, distance = 0.81 um
17-03-18 04:17:33.374 -07 000000610 INF: FPGA: Xmit ZDACW 36870\n [Z Motor]
17-03-18 04:17:33.374 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 04:17:33.384 -07 000000610 INF: FPGA: 'ZDACW 36870' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:17:33.384 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:33.384 -07 000000608 INF: FPGA: Recv ZDACR 36870
17-03-18 04:17:33.394 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.394 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:33.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.544 -07 000000438 INF: FPGA: Recv ZSGSRD 35573
17-03-18 04:17:33.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:33.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.554 -07 000000561 INF: FPGA: Recv ZSGSRD 35567
17-03-18 04:17:33.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 04:17:33.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.564 -07 000000447 INF: FPGA: Recv ZSGSRD 35563
17-03-18 04:17:33.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.574 -07 000000444 INF: FPGA: Recv ZSGSRD 35560
17-03-18 04:17:33.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.584 -07 000000611 INF: FPGA: Recv ZSGSRD 35562
17-03-18 04:17:33.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.594 -07 000000590 INF: FPGA: Recv ZSGSRD 35561
17-03-18 04:17:33.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.604 -07 000000012 INF: FPGA: Recv ZSGSRD 35559
17-03-18 04:17:33.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.614 -07 000000474 INF: FPGA: Recv ZSGSRD 35562
17-03-18 04:17:33.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.624 -07 000000444 INF: FPGA: Recv ZSGSRD 35568
17-03-18 04:17:33.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:33.634 -07 000000455 INF: FPGA: Recv ZSGSRD 35565
17-03-18 04:17:33.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:33.644 -07 000000618 INF: FPGA: Recv ZPIEZORD 31331
17-03-18 04:17:33.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:33.654 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.626 V. Piezo Error = -9.3 V.
17-03-18 04:17:33.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.8 um, Read 10 ADC samples: Avg = 35564 (-167.9 uncal um), Error = 0.9 uncal um, Median = 35562 (-167.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35559 (-167.9 uncal um), Max = 35573 (-168.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:17:33.654 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35564, posNoise = 9, negNoise = 5
17-03-18 04:17:33.654 -07 000000610 INF: Z Motor: After move to -0.168780, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:33.654 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 04:17:33.654 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:33.654 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:33.654 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:33.654 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:33.654 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:33.654 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:33.654 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:33.654 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:33.654 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:33.654 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:33.654 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:33.654 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:33.654 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:17:33.654 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:33.664 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 04:17:33.664 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:33.674 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms.
17-03-18 04:17:33.674 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 04:17:33.674 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 04:17:33.674 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 04:17:33.674 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 37046 150\n [Camera]
17-03-18 04:17:33.874 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:34.294 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:34.294 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:34.294 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:34.304 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:34.304 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:34.304 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:34.304 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:34.304 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 04:17:34.304 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:34.304 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) start.
17-03-18 04:17:34.494 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37046 803
17-03-18 04:17:34.634 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:34.674 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 04:17:34.674 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 04:17:34.684 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:34.684 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 04:17:34.684 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-18 04:17:34.684 -07 000000625 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:34.684 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 04:17:34.684 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 04:17:34.684 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 04:17:34.694 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 04:17:34.844 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:34.844 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:34.844 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:34.844 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:34.844 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) start.
17-03-18 04:17:34.844 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:34.844 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:34.844 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:34.844 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:34.844 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 04:17:35.034 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:35.034 -07 000000625 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:35.034 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 37046 150' command took 2 ms to send, 1343 ms to get response, and 1353 ms overall
17-03-18 04:17:35.034 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.169642
17-03-18 04:17:35.034 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.16964 mm
17-03-18 04:17:35.034 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:35.034 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 04:17:35.034 -07 000000444 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-18 04:17:35.034 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:35.034 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 37058, sync = True, waitForSettling = False)
17-03-18 04:17:35.034 -07 000000626 INF: Z Motor: Moving to -0.169641 mm, started at -0.168794 mm, distance = -0.85 um
17-03-18 04:17:35.044 -07 000000626 INF: FPGA: Xmit ZDACW 37058\n [Z Motor]
17-03-18 04:17:35.044 -07 000000611 INF: FPGA: Recv YRDPOS 136272
17-03-18 04:17:35.044 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:17:35.044 -07 000000444 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:35.044 -07 000000444 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:35.044 -07 000000444 INF: Y Motor: Moving 1350 steps-29
17-03-18 04:17:35.044 -07 000000487 INF: FPGA: Recv ZDACW
17-03-18 04:17:35.054 -07 000000626 INF: FPGA: 'ZDACW 37058' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 04:17:35.054 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:35.054 -07 000000611 INF: FPGA: Recv ZDACR 37058
17-03-18 04:17:35.064 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:35.064 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:35.064 -07 000000626 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 04:17:35.224 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 04:17:35.224 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 04:17:35.224 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:35.224 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 04:17:35.224 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 04:17:35.224 -07 000000479 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:35.224 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:35.224 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 04:17:35.224 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:35.234 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 04:17:35.434 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 04:17:35.434 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall
17-03-18 04:17:35.484 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:35.484 -07 000000474 INF: FPGA: Recv YRDPOS 137977
17-03-18 04:17:35.494 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:17:35.494 -07 000000444 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:35.494 -07 000000444 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm)
17-03-18 04:17:35.494 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.125 mm/sec
17-03-18 04:17:36.444 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:36.444 -07 000000579 INF: FPGA: Recv YRDPOS 137977
17-03-18 04:17:36.454 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:36.454 -07 000000444 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:36.484 -07 000000444 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:36.484 -07 000000444 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:36.484 -07 000000444 INF: Y Motor: Moved to 67.3716 after 1443 ms (table move)
17-03-18 04:17:36.484 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169641 mm (DAC = 37058)
17-03-18 04:17:36.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.484 -07 000000479 INF: FPGA: Recv ZSGSRD 35702
17-03-18 04:17:36.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:17:36.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.494 -07 000000590 INF: FPGA: Recv ZSGSRD 35699
17-03-18 04:17:36.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.504 -07 000000618 INF: FPGA: Recv ZSGSRD 35684
17-03-18 04:17:36.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.514 -07 000000579 INF: FPGA: Recv ZSGSRD 35695
17-03-18 04:17:36.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.524 -07 000000437 INF: FPGA: Recv ZSGSRD 35702
17-03-18 04:17:36.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.534 -07 000000626 INF: FPGA: Recv ZSGSRD 35701
17-03-18 04:17:36.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.544 -07 000000590 INF: FPGA: Recv ZSGSRD 35698
17-03-18 04:17:36.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.554 -07 000000474 INF: FPGA: Recv ZSGSRD 35691
17-03-18 04:17:36.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.564 -07 000000455 INF: FPGA: Recv ZSGSRD 35696
17-03-18 04:17:36.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.574 -07 000000444 INF: FPGA: Recv ZSGSRD 35698
17-03-18 04:17:36.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.584 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:36.584 -07 000000579 INF: FPGA: Recv ZPIEZORD 31498
17-03-18 04:17:36.594 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.594 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.655 V. Piezo Error = -9.3 V.
17-03-18 04:17:36.594 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.6 um, Read 10 ADC samples: Avg = 35697 (-168.8 uncal um), Error = 0.9 uncal um, Median = 35698 (-168.8 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 35684 (-168.7 uncal um), Max = 35702 (-168.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 13 (0.1 uncal um)
17-03-18 04:17:36.594 -07 000000610 INF: Z Motor: ADC noise = 13, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35697, posNoise = 5, negNoise = 13
17-03-18 04:17:36.594 -07 000000610 INF: Z Motor: After move to -0.169641, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:36.594 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 106 ms (allowed 150 ms), total time = 1552 ms
17-03-18 04:17:36.594 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:36.644 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 04:17:36.644 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:36.644 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.169648452835576. ----------
17-03-18 04:17:36.644 -07 000000610 INF: Cycle	123	Tile	10	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:36.644 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36882, sync = True, waitForSettling = True)
17-03-18 04:17:36.644 -07 000000610 INF: Z Motor: Moving to -0.168835 mm, started at -0.169648 mm, distance = 0.81 um
17-03-18 04:17:36.644 -07 000000610 INF: FPGA: Xmit ZDACW 36882\n [Z Motor]
17-03-18 04:17:36.644 -07 000000625 INF: FPGA: Recv ZDACW
17-03-18 04:17:36.654 -07 000000610 INF: FPGA: 'ZDACW 36882' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:17:36.654 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:36.654 -07 000000512 INF: FPGA: Recv ZDACR 36882
17-03-18 04:17:36.654 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:36.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:36.664 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.664 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:36.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.814 -07 000000626 INF: FPGA: Recv ZSGSRD 35574
17-03-18 04:17:36.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:36.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.824 -07 000000579 INF: FPGA: Recv ZSGSRD 35575
17-03-18 04:17:36.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.834 -07 000000447 INF: FPGA: Recv ZSGSRD 35570
17-03-18 04:17:36.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.844 -07 000000618 INF: FPGA: Recv ZSGSRD 35574
17-03-18 04:17:36.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.854 -07 000000474 INF: FPGA: Recv ZSGSRD 35570
17-03-18 04:17:36.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.864 -07 000000625 INF: FPGA: Recv ZSGSRD 35573
17-03-18 04:17:36.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.874 -07 000000437 INF: FPGA: Recv ZSGSRD 35570
17-03-18 04:17:36.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.884 -07 000000487 INF: FPGA: Recv ZSGSRD 35571
17-03-18 04:17:36.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.894 -07 000000455 INF: FPGA: Recv ZSGSRD 35576
17-03-18 04:17:36.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:36.904 -07 000000585 INF: FPGA: Recv ZSGSRD 35572
17-03-18 04:17:36.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.914 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:36.914 -07 000000626 INF: FPGA: Recv ZPIEZORD 31310
17-03-18 04:17:36.924 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:36.924 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.628 V. Piezo Error = -9.4 V.
17-03-18 04:17:36.924 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.8 um, Read 10 ADC samples: Avg = 35572 (-168.0 uncal um), Error = 0.9 uncal um, Median = 35572 (-168.0 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35570 (-168.0 uncal um), Max = 35576 (-168.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-18 04:17:36.924 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35572, posNoise = 4, negNoise = 2
17-03-18 04:17:36.924 -07 000000610 INF: Z Motor: After move to -0.168835, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:36.924 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 04:17:36.924 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:36.924 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:36.924 -07 000000479 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:36.924 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:36.924 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:36.924 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:36.924 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:36.924 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:36.924 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:36.924 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:36.924 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:36.924 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:36.924 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:17:36.924 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:36.934 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 04:17:36.934 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:36.944 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 04:17:36.944 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:17:36.944 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 04:17:36.944 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:17:36.944 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 37058 150\n [Camera]
17-03-18 04:17:37.144 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:37.564 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:37.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:37.564 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:37.564 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:37.564 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 04:17:37.564 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:37.574 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:37.574 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:37.574 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:37.574 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 04:17:37.764 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37058 803
17-03-18 04:17:37.904 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:37.954 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 04:17:37.954 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 04:17:37.954 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:37.954 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 04:17:37.954 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 04:17:37.954 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:37.954 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:37.954 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:37.954 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 04:17:37.964 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 04:17:38.114 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:38.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:38.114 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:38.114 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:38.114 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 04:17:38.114 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:38.114 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:38.114 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:38.114 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:38.114 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 04:17:38.304 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:38.304 -07 000000611 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:38.304 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 37058 150' command took 2 ms to send, 1345 ms to get response, and 1356 ms overall
17-03-18 04:17:38.304 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.169084
17-03-18 04:17:38.304 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16908 mm
17-03-18 04:17:38.304 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:38.304 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 04:17:38.314 -07 000000512 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-18 04:17:38.314 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:38.314 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 36936, sync = True, waitForSettling = False)
17-03-18 04:17:38.314 -07 000000626 INF: Z Motor: Moving to -0.169082 mm, started at -0.168845 mm, distance = -0.24 um
17-03-18 04:17:38.314 -07 000000455 INF: FPGA: Recv YRDPOS 137978
17-03-18 04:17:38.324 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:38.324 -07 000000512 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:38.324 -07 000000626 INF: FPGA: Xmit ZDACW 36936\n [Z Motor]
17-03-18 04:17:38.324 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 04:17:38.324 -07 000000512 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:38.324 -07 000000512 INF: Y Motor: Moving 1345 steps-23
17-03-18 04:17:38.334 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:38.334 -07 000000626 INF: FPGA: 'ZDACW 36936' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:38.344 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:38.344 -07 000000012 INF: FPGA: Recv ZDACR 36936
17-03-18 04:17:38.354 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:38.354 -07 000000626 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 04:17:38.394 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.004458,
17-03-18 04:17:38.494 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 04:17:38.494 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 04:17:38.494 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 04:17:38.494 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:38.494 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 04:17:38.494 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:38.494 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:38.494 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 04:17:38.494 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:38.504 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 04:17:38.704 -07 000000479 INF: FPGA: Recv YMVTILE
17-03-18 04:17:38.704 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-18 04:17:38.754 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:38.764 -07 000000447 INF: FPGA: Recv YRDPOS 139684
17-03-18 04:17:38.764 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:17:38.764 -07 000000512 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:38.764 -07 000000512 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 04:17:38.764 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.841 mm, average velocity = 2.196 mm/sec
17-03-18 04:17:39.714 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:39.714 -07 000000444 INF: FPGA: Recv YRDPOS 139684
17-03-18 04:17:39.724 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:39.724 -07 000000512 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:39.744 -07 000000512 INF: Y Motor: After move to 68.212608, error = -0.007530, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:39.744 -07 000000512 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:39.744 -07 000000512 INF: Y Motor: Moved to 68.2051 after 1439 ms (table move)
17-03-18 04:17:39.754 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169082 mm (DAC = 36936)
17-03-18 04:17:39.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:39.754 -07 000000625 INF: FPGA: Recv ZSGSRD 35604
17-03-18 04:17:39.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 04:17:39.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:39.764 -07 000000512 INF: FPGA: Recv ZSGSRD 35617
17-03-18 04:17:39.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:39.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:39.774 -07 000000479 INF: FPGA: Recv ZSGSRD 35609
17-03-18 04:17:39.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:39.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:39.784 -07 000000608 INF: FPGA: Recv ZSGSRD 35603
17-03-18 04:17:39.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:39.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:39.794 -07 000000012 INF: FPGA: Recv ZSGSRD 35608
17-03-18 04:17:39.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:39.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:39.804 -07 000000590 INF: FPGA: Recv ZSGSRD 35611
17-03-18 04:17:39.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:39.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:39.814 -07 000000480 INF: FPGA: Recv ZSGSRD 35609
17-03-18 04:17:39.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:39.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:39.824 -07 000000479 INF: FPGA: Recv ZSGSRD 35610
17-03-18 04:17:39.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:39.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:39.834 -07 000000608 INF: FPGA: Recv ZSGSRD 35605
17-03-18 04:17:39.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:39.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:39.844 -07 000000611 INF: FPGA: Recv ZSGSRD 35611
17-03-18 04:17:39.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:39.854 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:39.854 -07 000000501 INF: FPGA: Recv ZPIEZORD 31398
17-03-18 04:17:39.864 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:39.864 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.636 V. Piezo Error = -9.3 V.
17-03-18 04:17:39.864 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35609 (-168.2 uncal um), Error = 0.9 uncal um, Median = 35609 (-168.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35603 (-168.2 uncal um), Max = 35617 (-168.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:17:39.864 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35609, posNoise = 8, negNoise = 6
17-03-18 04:17:39.864 -07 000000610 INF: Z Motor: After move to -0.169082, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:39.864 -07 000000610 INF: Z Motor: Settle wait time = 1441 ms, measure time = 109 ms (allowed 150 ms), total time = 1550 ms
17-03-18 04:17:39.864 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:39.914 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms
17-03-18 04:17:39.914 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:39.914 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.205078125, Z-position -0.169083122167101. ----------
17-03-18 04:17:39.914 -07 000000610 INF: Cycle	123	Tile	11	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:39.914 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36760, sync = True, waitForSettling = True)
17-03-18 04:17:39.914 -07 000000610 INF: Z Motor: Moving to -0.168276 mm, started at -0.169083 mm, distance = 0.81 um
17-03-18 04:17:39.914 -07 000000610 INF: FPGA: Xmit ZDACW 36760\n [Z Motor]
17-03-18 04:17:39.924 -07 000000480 INF: FPGA: Recv ZDACW
17-03-18 04:17:39.924 -07 000000610 INF: FPGA: 'ZDACW 36760' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:17:39.924 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:39.924 -07 000000625 INF: FPGA: Recv ZDACR 36760
17-03-18 04:17:39.934 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:39.934 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:40.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:40.084 -07 000000626 INF: FPGA: Recv ZSGSRD 35481
17-03-18 04:17:40.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:40.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:40.094 -07 000000012 INF: FPGA: Recv ZSGSRD 35490
17-03-18 04:17:40.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:40.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:40.104 -07 000000561 INF: FPGA: Recv ZSGSRD 35478
17-03-18 04:17:40.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:40.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:40.114 -07 000000444 INF: FPGA: Recv ZSGSRD 35480
17-03-18 04:17:40.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:40.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:40.124 -07 000000590 INF: FPGA: Recv ZSGSRD 35488
17-03-18 04:17:40.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:40.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:40.134 -07 000000626 INF: FPGA: Recv ZSGSRD 35490
17-03-18 04:17:40.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:40.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:40.144 -07 000000455 INF: FPGA: Recv ZSGSRD 35481
17-03-18 04:17:40.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:40.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:40.154 -07 000000561 INF: FPGA: Recv ZSGSRD 35477
17-03-18 04:17:40.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:40.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:40.164 -07 000000474 INF: FPGA: Recv ZSGSRD 35487
17-03-18 04:17:40.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:40.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:40.174 -07 000000608 INF: FPGA: Recv ZSGSRD 35493
17-03-18 04:17:40.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:40.184 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:40.184 -07 000000479 INF: FPGA: Recv ZPIEZORD 31214
17-03-18 04:17:40.194 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:40.194 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.609 V. Piezo Error = -9.4 V.
17-03-18 04:17:40.194 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.3 um, Read 10 ADC samples: Avg = 35484 (-167.4 uncal um), Error = 0.9 uncal um, Median = 35484 (-167.4 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35477 (-167.4 uncal um), Max = 35493 (-167.5 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:17:40.194 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35484, posNoise = 9, negNoise = 7
17-03-18 04:17:40.194 -07 000000610 INF: Z Motor: After move to -0.168276, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:40.194 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 04:17:40.194 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:40.194 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:40.194 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:40.194 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:40.194 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:40.194 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:40.194 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:40.194 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:40.194 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 04:17:40.194 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:40.194 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:40.194 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:40.204 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 04:17:40.204 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:40.204 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:17:40.204 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:40.214 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 04:17:40.214 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 04:17:40.214 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 04:17:40.214 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 04:17:40.214 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 36936 150\n [Camera]
17-03-18 04:17:40.424 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:40.834 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:40.834 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:40.834 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:40.834 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:40.834 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 04:17:40.834 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:40.844 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:40.844 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:40.844 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:40.844 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 04:17:41.024 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36936 803
17-03-18 04:17:41.174 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:41.214 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 04:17:41.214 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 04:17:41.214 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:41.214 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 04:17:41.214 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 04:17:41.214 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:41.214 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:41.224 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:41.224 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 04:17:41.224 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 04:17:41.384 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:41.384 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:41.384 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:41.384 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:41.384 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 04:17:41.384 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:41.384 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:41.384 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:41.384 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:41.384 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 04:17:41.574 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:41.574 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:41.574 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 36936 150' command took 2 ms to send, 1342 ms to get response, and 1353 ms overall
17-03-18 04:17:41.574 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 04:17:41.574 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.205078125, Z-Position -0.168280095649381. ------
17-03-18 04:17:41.574 -07 000000487 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:17:41.574 -07 000000608 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.17487 mm
17-03-18 04:17:41.574 -07 000000608 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:41.584 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:17:41.584 -07 000000487 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:17:41.584 -07 000000487 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:17:41.584 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 38201, sync = True, waitForSettling = False)
17-03-18 04:17:41.584 -07 000000438 INF: Z Motor: Moving to -0.174873 mm, started at -0.168280 mm, distance = -6.59 um
17-03-18 04:17:41.584 -07 000000479 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 04:17:41.584 -07 000000479 INF: Y Motor: Moving to 69.0426 mm, started at 68.2051 mm, delta = 0.8375 mm
17-03-18 04:17:41.594 -07 000000438 INF: FPGA: Xmit ZDACW 38201\n [Z Motor]
17-03-18 04:17:41.594 -07 000000625 INF: FPGA: Recv ZDACW
17-03-18 04:17:41.604 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:41.604 -07 000000438 INF: FPGA: 'ZDACW 38201' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 04:17:41.604 -07 000000012 INF: FPGA: Recv YRDPOS 139684
17-03-18 04:17:41.614 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 04:17:41.614 -07 000000479 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:41.614 -07 000000479 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:41.614 -07 000000479 INF: Y Motor: Moving 1340 steps-15
17-03-18 04:17:41.614 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:41.614 -07 000000561 INF: FPGA: Recv ZDACR 38201
17-03-18 04:17:41.624 -07 000000438 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:41.624 -07 000000438 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-18 04:17:41.624 -07 000000479 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:41.654 -07 000000474 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:41.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:41.764 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 04:17:41.764 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 04:17:41.764 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:41.764 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 04:17:41.764 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 04:17:41.764 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:41.774 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:41.774 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 04:17:41.774 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:41.784 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 04:17:41.784 -07 000000618 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:17:41.784 -07 000000487 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-18 04:17:41.994 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-18 04:17:41.994 -07 000000479 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 04:17:42.044 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:42.054 -07 000000012 INF: FPGA: Recv YRDPOS 141367
17-03-18 04:17:42.054 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 04:17:42.054 -07 000000479 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:42.054 -07 000000479 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm)
17-03-18 04:17:42.054 -07 000000479 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.838 mm, average velocity = 2.159 mm/sec
17-03-18 04:17:43.004 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:43.004 -07 000000618 INF: FPGA: Recv YRDPOS 141368
17-03-18 04:17:43.014 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.014 -07 000000479 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:43.044 -07 000000479 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:43.044 -07 000000479 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 04:17:43.044 -07 000000479 INF: Y Motor: Moved to 69.0273 after 1457 ms (table move)
17-03-18 04:17:43.044 -07 000000608 INF: Z Motor: EndOfMoveAbsStepped: target = -0.174873 mm (DAC = 38201)
17-03-18 04:17:43.044 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:43.044 -07 000000444 INF: FPGA: Recv ZSGSRD 36511
17-03-18 04:17:43.054 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:17:43.054 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:43.054 -07 000000474 INF: FPGA: Recv ZSGSRD 36508
17-03-18 04:17:43.064 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.064 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:43.064 -07 000000618 INF: FPGA: Recv ZSGSRD 36511
17-03-18 04:17:43.074 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.074 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:43.074 -07 000000438 INF: FPGA: Recv ZSGSRD 36512
17-03-18 04:17:43.084 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.084 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:43.084 -07 000000447 INF: FPGA: Recv ZSGSRD 36518
17-03-18 04:17:43.094 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.094 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:43.094 -07 000000590 INF: FPGA: Recv ZSGSRD 36514
17-03-18 04:17:43.104 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.104 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:43.104 -07 000000474 INF: FPGA: Recv ZSGSRD 36502
17-03-18 04:17:43.114 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.114 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:43.114 -07 000000480 INF: FPGA: Recv ZSGSRD 36510
17-03-18 04:17:43.124 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.124 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:43.124 -07 000000585 INF: FPGA: Recv ZSGSRD 36512
17-03-18 04:17:43.134 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.134 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:43.134 -07 000000447 INF: FPGA: Recv ZSGSRD 36512
17-03-18 04:17:43.144 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.144 -07 000000608 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:43.144 -07 000000444 INF: FPGA: Recv ZPIEZORD 32593
17-03-18 04:17:43.154 -07 000000608 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.154 -07 000000608 INF: Z Motor: Piezo is near 49.6 V (nominally 0 to 100 V), expect near 58.3 V, since DAC is at 5.829 V. Piezo Error = -8.7 V.
17-03-18 04:17:43.154 -07 000000608 INF: Z Motor: ReadAdcAverage: Commanded Z = -174.9 um, Read 10 ADC samples: Avg = 36511 (-174.0 uncal um), Error = 0.9 uncal um, Median = 36512 (-174.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 36502 (-173.9 uncal um), Max = 36518 (-174.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 04:17:43.154 -07 000000608 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36511, posNoise = 7, negNoise = 9
17-03-18 04:17:43.154 -07 000000608 INF: Z Motor: After move to -0.174873, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:43.154 -07 000000608 INF: Z Motor: Settle wait time = 1462 ms, measure time = 105 ms (allowed 150 ms), total time = 1567 ms
17-03-18 04:17:43.154 -07 000000608 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:43.204 -07 000000608 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1622 ms
17-03-18 04:17:43.204 -07 000000608 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:43.204 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:43.204 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:43.204 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:43.204 -07 000000625 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:43.204 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:17:43.204 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:43.204 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:43.204 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:17:43.214 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:17:43.214 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:17:43.224 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 04:17:43.224 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-18 04:17:43.224 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:17:43.274 -07 000000012 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:17:43.564 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:17:43.574 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:17:43.574 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:17:43.574 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1077874736, 0x0, 559484976) start.
17-03-18 04:17:43.604 -07 000000501 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:17:43.614 -07 000000590 INF: FPGA: Recv CAMSNAP
17-03-18 04:17:43.614 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall
17-03-18 04:17:43.694 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1077874736, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 04:17:43.694 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:43.704 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:17:43.704 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 04:17:43.714 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:17:43.714 -07 000000455 INF: Autofocus start
17-03-18 04:17:43.714 -07 000000455 INF: MeasureProfile start
17-03-18 04:17:43.724 -07 000000590 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:17:43.724 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 6 ms overall
17-03-18 04:17:43.724 -07 000000618 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:17:43.724 -07 000000455 INF: MeasureProfile done
17-03-18 04:17:43.724 -07 000000455 INF: X=-16  Z correction [um]=-0.1496812
17-03-18 04:17:43.724 -07 000000455 INF: Autofocus finished
17-03-18 04:17:43.754 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.993549,
17-03-18 04:17:43.924 -07 000000447 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:17:43.924 -07 000000618 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-18 04:17:43.934 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.174877761518969. ----------
17-03-18 04:17:43.934 -07 000000610 INF: Cycle	123	Tile	12	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:43.934 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36680, sync = True, waitForSettling = True)
17-03-18 04:17:43.934 -07 000000610 INF: Z Motor: Moving to -0.167910 mm, started at -0.174878 mm, distance = 6.97 um
17-03-18 04:17:43.934 -07 000000610 INF: FPGA: Xmit ZDACW 36680\n [Z Motor]
17-03-18 04:17:43.934 -07 000000474 INF: FPGA: Recv ZDACW
17-03-18 04:17:43.944 -07 000000610 INF: FPGA: 'ZDACW 36680' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:17:43.944 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:43.944 -07 000000455 INF: FPGA: Recv ZDACR 36680
17-03-18 04:17:43.954 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:43.954 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:44.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:44.104 -07 000000479 INF: FPGA: Recv ZSGSRD 35422
17-03-18 04:17:44.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:44.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:44.114 -07 000000579 INF: FPGA: Recv ZSGSRD 35428
17-03-18 04:17:44.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:44.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:44.124 -07 000000590 INF: FPGA: Recv ZSGSRD 35429
17-03-18 04:17:44.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:44.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:44.134 -07 000000474 INF: FPGA: Recv ZSGSRD 35424
17-03-18 04:17:44.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:44.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:44.144 -07 000000455 INF: FPGA: Recv ZSGSRD 35430
17-03-18 04:17:44.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:44.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:44.154 -07 000000479 INF: FPGA: Recv ZSGSRD 35431
17-03-18 04:17:44.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:44.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:44.164 -07 000000618 INF: FPGA: Recv ZSGSRD 35428
17-03-18 04:17:44.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:44.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:44.184 -07 000000561 INF: FPGA: Recv ZSGSRD 35430
17-03-18 04:17:44.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:44.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:44.194 -07 000000012 INF: FPGA: Recv ZSGSRD 35429
17-03-18 04:17:44.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:44.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:44.204 -07 000000512 INF: FPGA: Recv ZSGSRD 35425
17-03-18 04:17:44.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:44.214 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:44.214 -07 000000480 INF: FPGA: Recv ZPIEZORD 31160
17-03-18 04:17:44.224 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:44.224 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.597 V. Piezo Error = -9.4 V.
17-03-18 04:17:44.224 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35428 (-167.1 uncal um), Error = 0.9 uncal um, Median = 35428 (-167.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35422 (-167.0 uncal um), Max = 35431 (-167.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:17:44.224 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35428, posNoise = 3, negNoise = 6
17-03-18 04:17:44.224 -07 000000610 INF: Z Motor: After move to -0.167910, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:44.224 -07 000000610 INF: Z Motor: MoveAbsStepped took 287 ms)
17-03-18 04:17:44.224 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:44.224 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:44.224 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:44.224 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:44.224 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:44.224 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:44.224 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:44.224 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:44.224 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:44.224 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:44.224 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:44.224 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:44.234 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 04:17:44.234 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:44.234 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:17:44.234 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:44.234 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 04:17:44.234 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 12 ms.
17-03-18 04:17:44.244 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 04:17:44.244 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 04:17:44.244 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 36857 150\n [Camera]
17-03-18 04:17:44.444 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:44.864 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:44.864 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:44.864 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:44.864 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:44.864 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-18 04:17:44.864 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:44.864 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:44.864 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:44.864 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:44.864 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-18 04:17:45.054 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36857 803
17-03-18 04:17:45.204 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:45.244 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 04:17:45.244 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 04:17:45.244 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:45.244 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 04:17:45.244 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 04:17:45.244 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:45.254 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:45.254 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 04:17:45.254 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:45.264 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 04:17:45.404 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:45.404 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:45.404 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:45.404 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:45.404 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-18 04:17:45.404 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:45.404 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:45.404 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:45.414 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:45.414 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-18 04:17:45.594 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:45.594 -07 000000474 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:45.594 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 36857 150' command took 2 ms to send, 1345 ms to get response, and 1353 ms overall
17-03-18 04:17:45.594 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.168353
17-03-18 04:17:45.594 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16835 mm
17-03-18 04:17:45.594 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:45.604 -07 000000608 INF: Z Motor: Entering MoveAbsStepped (DAC = 36777, sync = True, waitForSettling = False)
17-03-18 04:17:45.604 -07 000000608 INF: Z Motor: Moving to -0.168354 mm, started at -0.167920 mm, distance = -0.43 um
17-03-18 04:17:45.604 -07 000000608 INF: FPGA: Xmit ZDACW 36777\n [Z Motor]
17-03-18 04:17:45.604 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 04:17:45.604 -07 000000611 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-18 04:17:45.604 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 04:17:45.614 -07 000000608 INF: FPGA: 'ZDACW 36777' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:17:45.614 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:45.614 -07 000000501 INF: FPGA: Recv YRDPOS 141368
17-03-18 04:17:45.624 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 04:17:45.624 -07 000000608 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:45.624 -07 000000611 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:45.624 -07 000000611 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:45.624 -07 000000611 INF: Y Motor: Moving 1352 steps-32
17-03-18 04:17:45.624 -07 000000474 INF: FPGA: Recv ZDACR 36777
17-03-18 04:17:45.634 -07 000000608 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:45.634 -07 000000608 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 04:17:45.634 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:45.794 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 04:17:45.794 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 04:17:45.794 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:45.794 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 04:17:45.794 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 04:17:45.794 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:45.794 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:45.794 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 04:17:45.794 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 04:17:45.804 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 04:17:46.004 -07 000000012 INF: FPGA: Recv YMVTILE
17-03-18 04:17:46.004 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 04:17:46.064 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:46.064 -07 000000438 INF: FPGA: Recv YRDPOS 143080
17-03-18 04:17:46.074 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:46.074 -07 000000611 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:46.074 -07 000000611 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 04:17:46.074 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.845 mm, average velocity = 2.179 mm/sec
17-03-18 04:17:46.654 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:46.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:47.024 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:47.024 -07 000000480 INF: FPGA: Recv YRDPOS 143080
17-03-18 04:17:47.034 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:47.034 -07 000000611 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:47.064 -07 000000611 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:47.064 -07 000000611 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:47.064 -07 000000611 INF: Y Motor: Moved to 69.8633 after 1457 ms (table move)
17-03-18 04:17:47.064 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168354 mm (DAC = 36777)
17-03-18 04:17:47.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.064 -07 000000501 INF: FPGA: Recv ZSGSRD 35495
17-03-18 04:17:47.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:17:47.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.074 -07 000000579 INF: FPGA: Recv ZSGSRD 35499
17-03-18 04:17:47.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.084 -07 000000608 INF: FPGA: Recv ZSGSRD 35497
17-03-18 04:17:47.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.094 -07 000000625 INF: FPGA: Recv ZSGSRD 35497
17-03-18 04:17:47.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.104 -07 000000608 INF: FPGA: Recv ZSGSRD 35490
17-03-18 04:17:47.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.114 -07 000000579 INF: FPGA: Recv ZSGSRD 35490
17-03-18 04:17:47.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.124 -07 000000474 INF: FPGA: Recv ZSGSRD 35496
17-03-18 04:17:47.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 04:17:47.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.134 -07 000000611 INF: FPGA: Recv ZSGSRD 35494
17-03-18 04:17:47.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.144 -07 000000479 INF: FPGA: Recv ZSGSRD 35499
17-03-18 04:17:47.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.154 -07 000000512 INF: FPGA: Recv ZSGSRD 35496
17-03-18 04:17:47.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.164 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:47.164 -07 000000561 INF: FPGA: Recv ZPIEZORD 31260
17-03-18 04:17:47.174 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.174 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.612 V. Piezo Error = -9.3 V.
17-03-18 04:17:47.174 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.4 um, Read 10 ADC samples: Avg = 35495 (-167.5 uncal um), Error = 0.9 uncal um, Median = 35496 (-167.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35490 (-167.4 uncal um), Max = 35499 (-167.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:17:47.174 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35495, posNoise = 4, negNoise = 5
17-03-18 04:17:47.174 -07 000000610 INF: Z Motor: After move to -0.168354, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:47.174 -07 000000610 INF: Z Motor: Settle wait time = 1460 ms, measure time = 108 ms (allowed 150 ms), total time = 1568 ms
17-03-18 04:17:47.174 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:47.224 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1622 ms
17-03-18 04:17:47.224 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:47.224 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.16835076198294. ----------
17-03-18 04:17:47.224 -07 000000610 INF: Cycle	123	Tile	13	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:47.224 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36600, sync = True, waitForSettling = True)
17-03-18 04:17:47.224 -07 000000610 INF: Z Motor: Moving to -0.167544 mm, started at -0.168351 mm, distance = 0.81 um
17-03-18 04:17:47.224 -07 000000610 INF: FPGA: Xmit ZDACW 36600\n [Z Motor]
17-03-18 04:17:47.224 -07 000000608 INF: FPGA: Recv ZDACW
17-03-18 04:17:47.234 -07 000000610 INF: FPGA: 'ZDACW 36600' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:17:47.234 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:47.234 -07 000000487 INF: FPGA: Recv ZDACR 36600
17-03-18 04:17:47.244 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.244 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:47.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.394 -07 000000618 INF: FPGA: Recv ZSGSRD 35369
17-03-18 04:17:47.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:47.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.404 -07 000000625 INF: FPGA: Recv ZSGSRD 35376
17-03-18 04:17:47.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.414 -07 000000618 INF: FPGA: Recv ZSGSRD 35373
17-03-18 04:17:47.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.424 -07 000000487 INF: FPGA: Recv ZSGSRD 35370
17-03-18 04:17:47.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.434 -07 000000618 INF: FPGA: Recv ZSGSRD 35373
17-03-18 04:17:47.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.444 -07 000000438 INF: FPGA: Recv ZSGSRD 35373
17-03-18 04:17:47.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.454 -07 000000590 INF: FPGA: Recv ZSGSRD 35370
17-03-18 04:17:47.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.464 -07 000000474 INF: FPGA: Recv ZSGSRD 35369
17-03-18 04:17:47.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.474 -07 000000437 INF: FPGA: Recv ZSGSRD 35363
17-03-18 04:17:47.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:47.484 -07 000000479 INF: FPGA: Recv ZSGSRD 35374
17-03-18 04:17:47.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:47.494 -07 000000447 INF: FPGA: Recv ZPIEZORD 31066
17-03-18 04:17:47.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:47.504 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.585 V. Piezo Error = -9.5 V.
17-03-18 04:17:47.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.5 um, Read 10 ADC samples: Avg = 35371 (-166.7 uncal um), Error = 0.9 uncal um, Median = 35372 (-166.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35363 (-166.6 uncal um), Max = 35376 (-166.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 04:17:47.504 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35371, posNoise = 5, negNoise = 8
17-03-18 04:17:47.504 -07 000000610 INF: Z Motor: After move to -0.167544, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:47.504 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 04:17:47.504 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:47.504 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:47.504 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:47.504 -07 000000479 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:47.504 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:47.504 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:47.504 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:47.504 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:47.504 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:47.504 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:47.504 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:47.504 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:47.514 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:17:47.514 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:47.514 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:17:47.514 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:47.524 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:17:47.524 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:17:47.524 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 04:17:47.524 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:17:47.524 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 36777 150\n [Camera]
17-03-18 04:17:47.734 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:48.144 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:48.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:48.154 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:48.154 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:48.154 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-18 04:17:48.154 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:48.154 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:48.154 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:48.154 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:48.154 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-18 04:17:48.344 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36777 803
17-03-18 04:17:48.494 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:48.524 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 04:17:48.524 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 04:17:48.524 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:48.524 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 04:17:48.524 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 04:17:48.524 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:48.534 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:48.534 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 04:17:48.534 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:17:48.544 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 04:17:48.694 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:48.694 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:48.694 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:48.694 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:48.694 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-18 04:17:48.694 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:48.694 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:48.694 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:48.694 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:48.694 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start.
17-03-18 04:17:48.884 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:48.884 -07 000000447 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:48.884 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 36777 150' command took 4 ms to send, 1344 ms to get response, and 1355 ms overall
17-03-18 04:17:48.884 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.168009
17-03-18 04:17:48.884 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16801 mm
17-03-18 04:17:48.884 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:48.894 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 36702, sync = True, waitForSettling = False)
17-03-18 04:17:48.894 -07 000000611 INF: Z Motor: Moving to -0.168011 mm, started at -0.167554 mm, distance = -0.46 um
17-03-18 04:17:48.894 -07 000000611 INF: FPGA: Xmit ZDACW 36702\n [Z Motor]
17-03-18 04:17:48.894 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 04:17:48.894 -07 000000480 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-18 04:17:48.894 -07 000000474 INF: FPGA: Recv ZDACW
17-03-18 04:17:48.904 -07 000000611 INF: FPGA: 'ZDACW 36702' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 04:17:48.904 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:48.904 -07 000000501 INF: FPGA: Recv YRDPOS 143080
17-03-18 04:17:48.914 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 04:17:48.914 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:48.914 -07 000000480 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:48.914 -07 000000480 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:48.914 -07 000000480 INF: Y Motor: Moving 1343 steps-19
17-03-18 04:17:48.914 -07 000000444 INF: FPGA: Recv ZDACR 36702
17-03-18 04:17:48.924 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:48.924 -07 000000611 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet))
17-03-18 04:17:48.924 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:49.084 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 389 ms.
17-03-18 04:17:49.084 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 04:17:49.084 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:49.084 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 390 ms.
17-03-18 04:17:49.084 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 04:17:49.084 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:49.084 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:49.084 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 04:17:49.094 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:49.104 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-18 04:17:49.114 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.986717,
17-03-18 04:17:49.294 -07 000000479 INF: FPGA: Recv YMVTILE
17-03-18 04:17:49.294 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall
17-03-18 04:17:49.344 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:49.354 -07 000000579 INF: FPGA: Recv YRDPOS 144770
17-03-18 04:17:49.364 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:49.364 -07 000000480 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:49.364 -07 000000480 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 04:17:49.364 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.839 mm, average velocity = 2.163 mm/sec
17-03-18 04:17:50.314 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:50.314 -07 000000579 INF: FPGA: Recv YRDPOS 144770
17-03-18 04:17:50.324 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.324 -07 000000480 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:50.354 -07 000000480 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:50.354 -07 000000480 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:50.354 -07 000000480 INF: Y Motor: Moved to 70.6885 after 1460 ms (table move)
17-03-18 04:17:50.354 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168011 mm (DAC = 36702)
17-03-18 04:17:50.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.354 -07 000000561 INF: FPGA: Recv ZSGSRD 35451
17-03-18 04:17:50.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:17:50.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.364 -07 000000012 INF: FPGA: Recv ZSGSRD 35446
17-03-18 04:17:50.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.374 -07 000000437 INF: FPGA: Recv ZSGSRD 35444
17-03-18 04:17:50.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.384 -07 000000512 INF: FPGA: Recv ZSGSRD 35436
17-03-18 04:17:50.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.394 -07 000000444 INF: FPGA: Recv ZSGSRD 35444
17-03-18 04:17:50.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.404 -07 000000455 INF: FPGA: Recv ZSGSRD 35436
17-03-18 04:17:50.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.414 -07 000000611 INF: FPGA: Recv ZSGSRD 35442
17-03-18 04:17:50.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.424 -07 000000479 INF: FPGA: Recv ZSGSRD 35436
17-03-18 04:17:50.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.434 -07 000000579 INF: FPGA: Recv ZSGSRD 35441
17-03-18 04:17:50.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.444 -07 000000561 INF: FPGA: Recv ZSGSRD 35449
17-03-18 04:17:50.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.454 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:50.454 -07 000000618 INF: FPGA: Recv ZPIEZORD 31191
17-03-18 04:17:50.464 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.464 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.600 V. Piezo Error = -9.4 V.
17-03-18 04:17:50.464 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.0 um, Read 10 ADC samples: Avg = 35442 (-167.1 uncal um), Error = 0.9 uncal um, Median = 35443 (-167.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35436 (-167.1 uncal um), Max = 35451 (-167.2 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:17:50.464 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35442, posNoise = 9, negNoise = 6
17-03-18 04:17:50.464 -07 000000610 INF: Z Motor: After move to -0.168011, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:50.464 -07 000000610 INF: Z Motor: Settle wait time = 1463 ms, measure time = 106 ms (allowed 150 ms), total time = 1569 ms
17-03-18 04:17:50.464 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:50.514 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1623 ms
17-03-18 04:17:50.514 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:50.514 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.168010278739427. ----------
17-03-18 04:17:50.514 -07 000000610 INF: Cycle	123	Tile	14	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:50.514 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36525, sync = True, waitForSettling = True)
17-03-18 04:17:50.514 -07 000000610 INF: Z Motor: Moving to -0.167201 mm, started at -0.168010 mm, distance = 0.81 um
17-03-18 04:17:50.514 -07 000000610 INF: FPGA: Xmit ZDACW 36525\n [Z Motor]
17-03-18 04:17:50.514 -07 000000625 INF: FPGA: Recv ZDACW
17-03-18 04:17:50.524 -07 000000610 INF: FPGA: 'ZDACW 36525' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:17:50.524 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:50.524 -07 000000626 INF: FPGA: Recv ZDACR 36525
17-03-18 04:17:50.534 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.534 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:50.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.684 -07 000000012 INF: FPGA: Recv ZSGSRD 35326
17-03-18 04:17:50.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:50.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.694 -07 000000474 INF: FPGA: Recv ZSGSRD 35324
17-03-18 04:17:50.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.704 -07 000000626 INF: FPGA: Recv ZSGSRD 35318
17-03-18 04:17:50.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.714 -07 000000444 INF: FPGA: Recv ZSGSRD 35317
17-03-18 04:17:50.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.724 -07 000000487 INF: FPGA: Recv ZSGSRD 35316
17-03-18 04:17:50.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.734 -07 000000480 INF: FPGA: Recv ZSGSRD 35312
17-03-18 04:17:50.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.744 -07 000000512 INF: FPGA: Recv ZSGSRD 35320
17-03-18 04:17:50.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.754 -07 000000501 INF: FPGA: Recv ZSGSRD 35319
17-03-18 04:17:50.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.764 -07 000000444 INF: FPGA: Recv ZSGSRD 35322
17-03-18 04:17:50.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:50.774 -07 000000608 INF: FPGA: Recv ZSGSRD 35315
17-03-18 04:17:50.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.784 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:50.784 -07 000000444 INF: FPGA: Recv ZPIEZORD 31018
17-03-18 04:17:50.794 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:50.794 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.573 V. Piezo Error = -9.5 V.
17-03-18 04:17:50.794 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.2 um, Read 10 ADC samples: Avg = 35319 (-166.4 uncal um), Error = 0.8 uncal um, Median = 35318 (-166.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35312 (-166.3 uncal um), Max = 35326 (-166.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:17:50.794 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35319, posNoise = 7, negNoise = 7
17-03-18 04:17:50.794 -07 000000610 INF: Z Motor: After move to -0.167201, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:50.794 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 04:17:50.794 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:50.794 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:50.794 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:50.794 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:50.794 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:50.794 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:50.794 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:50.794 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:50.794 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:50.794 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:50.794 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:50.794 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:50.804 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 04:17:50.804 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:50.804 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:17:50.804 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:50.814 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 04:17:50.814 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 04:17:50.814 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 04:17:50.814 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 04:17:50.824 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 36702 150\n [Camera]
17-03-18 04:17:51.024 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:51.434 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:51.434 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:51.434 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:51.434 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:51.434 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start.
17-03-18 04:17:51.444 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:51.444 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:51.444 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:51.444 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:51.444 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start.
17-03-18 04:17:51.634 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36702 803
17-03-18 04:17:51.654 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:51.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:51.784 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:51.814 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 04:17:51.814 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 04:17:51.814 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:51.814 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 04:17:51.814 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 04:17:51.814 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:51.824 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:51.824 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 04:17:51.824 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:51.824 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 04:17:51.984 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:51.984 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:51.984 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:51.984 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:51.984 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-18 04:17:51.984 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:51.984 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:51.984 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:51.984 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:51.984 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) start.
17-03-18 04:17:52.174 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:52.174 -07 000000608 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:52.174 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 36702 150' command took 2 ms to send, 1344 ms to get response, and 1354 ms overall
17-03-18 04:17:52.174 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.167879
17-03-18 04:17:52.174 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16788 mm
17-03-18 04:17:52.174 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:52.174 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 04:17:52.174 -07 000000618 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 04:17:52.174 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:52.174 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 36673, sync = True, waitForSettling = False)
17-03-18 04:17:52.174 -07 000000480 INF: Z Motor: Moving to -0.167878 mm, started at -0.167220 mm, distance = -0.66 um
17-03-18 04:17:52.184 -07 000000480 INF: FPGA: Xmit ZDACW 36673\n [Z Motor]
17-03-18 04:17:52.184 -07 000000626 INF: FPGA: Recv YRDPOS 144770
17-03-18 04:17:52.184 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 04:17:52.184 -07 000000618 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:52.184 -07 000000618 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:52.184 -07 000000618 INF: Y Motor: Moving 1351 steps-29
17-03-18 04:17:52.184 -07 000000012 INF: FPGA: Recv ZDACW
17-03-18 04:17:52.194 -07 000000480 INF: FPGA: 'ZDACW 36673' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:52.194 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:52.204 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:52.204 -07 000000437 INF: FPGA: Recv ZDACR 36673
17-03-18 04:17:52.214 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:52.214 -07 000000480 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 04:17:52.384 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 04:17:52.384 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 04:17:52.384 -07 000000625 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:52.384 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 405 ms.
17-03-18 04:17:52.384 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 04:17:52.394 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:52.394 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 04:17:52.394 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 04:17:52.394 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 413 ms.
17-03-18 04:17:52.404 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 419 ms.
17-03-18 04:17:52.564 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-18 04:17:52.564 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 04:17:52.614 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:52.624 -07 000000487 INF: FPGA: Recv YRDPOS 146471
17-03-18 04:17:52.634 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:52.634 -07 000000618 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:52.634 -07 000000618 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 04:17:52.634 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.844 mm, average velocity = 2.187 mm/sec
17-03-18 04:17:53.584 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:53.584 -07 000000479 INF: FPGA: Recv YRDPOS 146471
17-03-18 04:17:53.594 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:53.594 -07 000000618 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:53.624 -07 000000618 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:53.624 -07 000000618 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:53.624 -07 000000618 INF: Y Motor: Moved to 71.5190 after 1441 ms (table move)
17-03-18 04:17:53.624 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167878 mm (DAC = 36673)
17-03-18 04:17:53.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.624 -07 000000590 INF: FPGA: Recv ZSGSRD 35425
17-03-18 04:17:53.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:17:53.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.634 -07 000000512 INF: FPGA: Recv ZSGSRD 35430
17-03-18 04:17:53.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.644 -07 000000608 INF: FPGA: Recv ZSGSRD 35423
17-03-18 04:17:53.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.654 -07 000000438 INF: FPGA: Recv ZSGSRD 35428
17-03-18 04:17:53.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.664 -07 000000455 INF: FPGA: Recv ZSGSRD 35422
17-03-18 04:17:53.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.674 -07 000000626 INF: FPGA: Recv ZSGSRD 35420
17-03-18 04:17:53.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.684 -07 000000585 INF: FPGA: Recv ZSGSRD 35419
17-03-18 04:17:53.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.694 -07 000000608 INF: FPGA: Recv ZSGSRD 35416
17-03-18 04:17:53.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.704 -07 000000438 INF: FPGA: Recv ZSGSRD 35423
17-03-18 04:17:53.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.714 -07 000000447 INF: FPGA: Recv ZSGSRD 35423
17-03-18 04:17:53.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:53.724 -07 000000626 INF: FPGA: Recv ZPIEZORD 31153
17-03-18 04:17:53.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.734 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.596 V. Piezo Error = -9.4 V.
17-03-18 04:17:53.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35423 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35423 (-167.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35416 (-167.0 uncal um), Max = 35430 (-167.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:17:53.734 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35423, posNoise = 7, negNoise = 7
17-03-18 04:17:53.734 -07 000000610 INF: Z Motor: After move to -0.167878, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:53.734 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 106 ms (allowed 150 ms), total time = 1550 ms
17-03-18 04:17:53.734 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:53.784 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 04:17:53.784 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:53.784 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.167888218708733. ----------
17-03-18 04:17:53.784 -07 000000610 INF: Cycle	123	Tile	15	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:53.784 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36496, sync = True, waitForSettling = True)
17-03-18 04:17:53.784 -07 000000610 INF: Z Motor: Moving to -0.167068 mm, started at -0.167888 mm, distance = 0.82 um
17-03-18 04:17:53.784 -07 000000610 INF: FPGA: Xmit ZDACW 36496\n [Z Motor]
17-03-18 04:17:53.784 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 04:17:53.794 -07 000000610 INF: FPGA: 'ZDACW 36496' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:17:53.794 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:53.794 -07 000000480 INF: FPGA: Recv ZDACR 36496
17-03-18 04:17:53.804 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.804 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:53.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.954 -07 000000561 INF: FPGA: Recv ZSGSRD 35301
17-03-18 04:17:53.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:53.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.964 -07 000000437 INF: FPGA: Recv ZSGSRD 35299
17-03-18 04:17:53.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.974 -07 000000455 INF: FPGA: Recv ZSGSRD 35303
17-03-18 04:17:53.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.984 -07 000000447 INF: FPGA: Recv ZSGSRD 35293
17-03-18 04:17:53.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:53.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:53.994 -07 000000480 INF: FPGA: Recv ZSGSRD 35296
17-03-18 04:17:54.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:54.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:54.004 -07 000000561 INF: FPGA: Recv ZSGSRD 35296
17-03-18 04:17:54.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:54.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:54.014 -07 000000608 INF: FPGA: Recv ZSGSRD 35296
17-03-18 04:17:54.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:54.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:54.024 -07 000000455 INF: FPGA: Recv ZSGSRD 35292
17-03-18 04:17:54.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:54.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:54.034 -07 000000625 INF: FPGA: Recv ZSGSRD 35296
17-03-18 04:17:54.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:54.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:54.044 -07 000000455 INF: FPGA: Recv ZSGSRD 35299
17-03-18 04:17:54.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:54.054 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:54.054 -07 000000487 INF: FPGA: Recv ZPIEZORD 30999
17-03-18 04:17:54.064 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:54.064 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.569 V. Piezo Error = -9.5 V.
17-03-18 04:17:54.064 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35297 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35296 (-166.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35292 (-166.2 uncal um), Max = 35303 (-166.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:17:54.064 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35297, posNoise = 6, negNoise = 5
17-03-18 04:17:54.064 -07 000000610 INF: Z Motor: After move to -0.167068, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:54.064 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 04:17:54.064 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:54.064 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:54.064 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:54.064 -07 000000479 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:54.064 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:54.064 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:54.064 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:54.064 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:54.064 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:54.064 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:54.064 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 04:17:54.064 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:54.074 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:17:54.074 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:54.074 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 5 ms.
17-03-18 04:17:54.074 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:54.084 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 04:17:54.084 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 04:17:54.084 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:17:54.084 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 04:17:54.094 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 36673 150\n [Camera]
17-03-18 04:17:54.294 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:17:54.474 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.018051,
17-03-18 04:17:54.714 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 613
17-03-18 04:17:54.714 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 613
17-03-18 04:17:54.714 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:54.714 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:54.714 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) start.
17-03-18 04:17:54.714 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 613
17-03-18 04:17:54.714 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 613
17-03-18 04:17:54.714 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:54.864 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:54.864 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 04:17:54.904 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36673 803
17-03-18 04:17:55.054 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:55.114 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 04:17:55.114 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 04:17:55.114 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:55.114 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:55.114 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 04:17:55.234 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 04:17:55.234 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 04:17:55.234 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:55.244 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:55.244 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 533 ms.
17-03-18 04:17:55.254 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:55.254 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:55.254 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:55.254 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:55.254 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:55.254 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:55.264 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:55.264 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 04:17:55.264 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:55.264 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-18 04:17:55.444 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:17:55.444 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:55.444 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 36673 150' command took 2 ms to send, 1344 ms to get response, and 1353 ms overall
17-03-18 04:17:55.444 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 04:17:55.444 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51904296875, Z-Position -0.167078767978871. ------
17-03-18 04:17:55.454 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:17:55.454 -07 000000487 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.17350 mm
17-03-18 04:17:55.454 -07 000000487 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:55.454 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:17:55.454 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 04:17:55.454 -07 000000501 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-18 04:17:55.454 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 37901, sync = True, waitForSettling = False)
17-03-18 04:17:55.454 -07 000000437 INF: Z Motor: Moving to -0.173500 mm, started at -0.167079 mm, distance = -6.42 um
17-03-18 04:17:55.464 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:55.464 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:55.464 -07 000000438 INF: FPGA: Recv YRDPOS 146471
17-03-18 04:17:55.474 -07 000000437 INF: FPGA: Xmit ZDACW 37901\n [Z Motor]
17-03-18 04:17:55.474 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 04:17:55.474 -07 000000501 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:55.474 -07 000000501 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:55.474 -07 000000501 INF: Y Motor: Moving 1350 steps-28
17-03-18 04:17:55.474 -07 000000625 INF: FPGA: Recv ZDACW
17-03-18 04:17:55.484 -07 000000561 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:17:55.484 -07 000000437 INF: FPGA: 'ZDACW 37901' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-18 04:17:55.494 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:55.504 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:55.504 -07 000000012 INF: FPGA: Recv ZDACR 37901
17-03-18 04:17:55.514 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 04:17:55.514 -07 000000437 INF: Z Motor: MoveAbsStepped took 53 ms (did NOT wait for settling yet))
17-03-18 04:17:55.644 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 04:17:55.644 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 04:17:55.644 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:55.644 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 04:17:55.644 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 04:17:55.644 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:55.644 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:55.644 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:17:55.644 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 04:17:55.654 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 04:17:55.684 -07 000000625 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:17:55.684 -07 000000561 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 04:17:55.864 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 04:17:55.864 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 04:17:55.914 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:55.914 -07 000000455 INF: FPGA: Recv YRDPOS 148172
17-03-18 04:17:55.924 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:17:55.924 -07 000000501 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:55.924 -07 000000501 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 04:17:55.924 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.125 mm/sec
17-03-18 04:17:56.654 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:17:56.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:17:56.874 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:56.874 -07 000000012 INF: FPGA: Recv YRDPOS 148172
17-03-18 04:17:56.884 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:56.884 -07 000000501 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:56.914 -07 000000501 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:17:56.914 -07 000000501 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:17:56.914 -07 000000501 INF: Y Motor: Moved to 72.3496 after 1454 ms (table move)
17-03-18 04:17:56.914 -07 000000487 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173500 mm (DAC = 37901)
17-03-18 04:17:56.914 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:56.914 -07 000000444 INF: FPGA: Recv ZSGSRD 36296
17-03-18 04:17:56.924 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:17:56.924 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:56.924 -07 000000561 INF: FPGA: Recv ZSGSRD 36292
17-03-18 04:17:56.934 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:56.934 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:56.934 -07 000000012 INF: FPGA: Recv ZSGSRD 36300
17-03-18 04:17:56.944 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:56.944 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:56.944 -07 000000437 INF: FPGA: Recv ZSGSRD 36299
17-03-18 04:17:56.954 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:56.954 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:56.954 -07 000000512 INF: FPGA: Recv ZSGSRD 36296
17-03-18 04:17:56.964 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:56.964 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:56.964 -07 000000579 INF: FPGA: Recv ZSGSRD 36297
17-03-18 04:17:56.974 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:56.974 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:56.974 -07 000000625 INF: FPGA: Recv ZSGSRD 36299
17-03-18 04:17:56.984 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:56.984 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:56.984 -07 000000585 INF: FPGA: Recv ZSGSRD 36294
17-03-18 04:17:56.994 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:56.994 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:56.994 -07 000000626 INF: FPGA: Recv ZSGSRD 36295
17-03-18 04:17:57.004 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:57.004 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:57.004 -07 000000501 INF: FPGA: Recv ZSGSRD 36300
17-03-18 04:17:57.014 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:57.014 -07 000000487 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:57.014 -07 000000480 INF: FPGA: Recv ZPIEZORD 32321
17-03-18 04:17:57.024 -07 000000487 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:57.024 -07 000000487 INF: Z Motor: Piezo is near 49.0 V (nominally 0 to 100 V), expect near 57.8 V, since DAC is at 5.783 V. Piezo Error = -8.8 V.
17-03-18 04:17:57.024 -07 000000487 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.5 um, Read 10 ADC samples: Avg = 36297 (-172.6 uncal um), Error = 0.9 uncal um, Median = 36296 (-172.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 36292 (-172.6 uncal um), Max = 36300 (-172.6 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:17:57.024 -07 000000487 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36297, posNoise = 3, negNoise = 5
17-03-18 04:17:57.024 -07 000000487 INF: Z Motor: After move to -0.173500, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:57.024 -07 000000487 INF: Z Motor: Settle wait time = 1458 ms, measure time = 105 ms (allowed 150 ms), total time = 1563 ms
17-03-18 04:17:57.024 -07 000000487 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 04:17:57.074 -07 000000487 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1615 ms
17-03-18 04:17:57.074 -07 000000487 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:17:57.074 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:57.074 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:57.074 -07 000000625 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:57.074 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:57.074 -07 000000611 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:17:57.074 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:57.074 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:57.074 -07 000000611 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:17:57.084 -07 000000611 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:17:57.084 -07 000000611 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:17:57.094 -07 000000611 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 04:17:57.094 -07 000000611 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 04:17:57.094 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:17:57.144 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:17:57.444 -07 000000590 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:17:57.444 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:17:57.444 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:17:57.444 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2988216424, 0x0, 559484976) start.
17-03-18 04:17:57.484 -07 000000625 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:17:57.484 -07 000000437 INF: FPGA: Recv CAMSNAP
17-03-18 04:17:57.484 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 384 ms overall
17-03-18 04:17:57.574 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2988216424, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 04:17:57.574 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:57.574 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:17:57.574 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 04:17:57.584 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:17:57.584 -07 000000444 INF: Autofocus start
17-03-18 04:17:57.584 -07 000000444 INF: MeasureProfile start
17-03-18 04:17:57.584 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:17:57.594 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:17:57.594 -07 000000618 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:17:57.594 -07 000000444 INF: MeasureProfile done
17-03-18 04:17:57.594 -07 000000444 INF: X=16  Z correction [um]=0.01042744
17-03-18 04:17:57.594 -07 000000444 INF: Autofocus finished
17-03-18 04:17:57.794 -07 000000487 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:17:57.794 -07 000000618 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 04:17:57.794 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.173502980120632. ----------
17-03-18 04:17:57.794 -07 000000610 INF: Cycle	123	Tile	16	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:17:57.804 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36416, sync = True, waitForSettling = True)
17-03-18 04:17:57.804 -07 000000610 INF: Z Motor: Moving to -0.166702 mm, started at -0.173503 mm, distance = 6.80 um
17-03-18 04:17:57.804 -07 000000610 INF: FPGA: Xmit ZDACW 36416\n [Z Motor]
17-03-18 04:17:57.804 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 04:17:57.814 -07 000000610 INF: FPGA: 'ZDACW 36416' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 04:17:57.814 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:57.814 -07 000000437 INF: FPGA: Recv ZDACR 36416
17-03-18 04:17:57.824 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:57.824 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:17:57.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:57.974 -07 000000579 INF: FPGA: Recv ZSGSRD 35238
17-03-18 04:17:57.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:17:57.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:57.984 -07 000000480 INF: FPGA: Recv ZSGSRD 35240
17-03-18 04:17:57.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:57.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:57.994 -07 000000618 INF: FPGA: Recv ZSGSRD 35241
17-03-18 04:17:58.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:58.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:58.004 -07 000000561 INF: FPGA: Recv ZSGSRD 35237
17-03-18 04:17:58.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:58.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:58.014 -07 000000618 INF: FPGA: Recv ZSGSRD 35239
17-03-18 04:17:58.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:58.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:58.024 -07 000000447 INF: FPGA: Recv ZSGSRD 35244
17-03-18 04:17:58.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:58.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:58.034 -07 000000618 INF: FPGA: Recv ZSGSRD 35245
17-03-18 04:17:58.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:58.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:58.044 -07 000000561 INF: FPGA: Recv ZSGSRD 35239
17-03-18 04:17:58.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:58.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:58.054 -07 000000474 INF: FPGA: Recv ZSGSRD 35239
17-03-18 04:17:58.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:58.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:17:58.064 -07 000000447 INF: FPGA: Recv ZSGSRD 35242
17-03-18 04:17:58.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:58.074 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:17:58.074 -07 000000512 INF: FPGA: Recv ZPIEZORD 30910
17-03-18 04:17:58.084 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:58.084 -07 000000610 INF: Z Motor: Piezo is near 46.0 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.557 V. Piezo Error = -9.5 V.
17-03-18 04:17:58.084 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.7 um, Read 10 ADC samples: Avg = 35240 (-165.8 uncal um), Error = 0.9 uncal um, Median = 35240 (-165.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35237 (-165.8 uncal um), Max = 35245 (-165.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 04:17:58.084 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35240, posNoise = 5, negNoise = 3
17-03-18 04:17:58.084 -07 000000610 INF: Z Motor: After move to -0.166702, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:17:58.084 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 04:17:58.084 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:17:58.084 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:17:58.084 -07 000000479 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:17:58.084 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:17:58.084 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:17:58.084 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:17:58.084 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:17:58.084 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:17:58.084 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:17:58.084 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:17:58.084 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:17:58.084 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:17:58.094 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:17:58.094 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:17:58.094 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:17:58.094 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:17:58.104 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:17:58.104 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:17:58.104 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 04:17:58.104 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:17:58.114 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 36592 150\n [Camera]
17-03-18 04:17:58.314 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP turning red on 195
17-03-18 04:17:58.724 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:17:58.724 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:17:58.724 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:58.724 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:58.724 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) start.
17-03-18 04:17:58.734 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:17:58.734 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:17:58.734 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:58.854 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:58.854 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 04:17:58.924 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36592 803
17-03-18 04:17:59.074 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:17:59.104 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 04:17:59.114 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 04:17:59.114 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:59.114 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:59.114 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 04:17:59.224 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 04:17:59.224 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-18 04:17:59.224 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:59.224 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:59.234 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 503 ms.
17-03-18 04:17:59.274 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:17:59.274 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:17:59.274 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:17:59.274 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:17:59.274 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:17:59.274 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:17:59.274 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:17:59.274 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 04:17:59.274 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:17:59.274 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-18 04:17:59.464 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:17:59.464 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:17:59.464 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 36592 150' command took 2 ms to send, 1343 ms to get response, and 1354 ms overall
17-03-18 04:17:59.464 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.167147
17-03-18 04:17:59.464 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16715 mm
17-03-18 04:17:59.464 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:17:59.464 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 04:17:59.464 -07 000000561 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 04:17:59.464 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:59.464 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 36513, sync = True, waitForSettling = False)
17-03-18 04:17:59.464 -07 000000438 INF: Z Motor: Moving to -0.167146 mm, started at -0.166713 mm, distance = -0.43 um
17-03-18 04:17:59.474 -07 000000438 INF: FPGA: Xmit ZDACW 36513\n [Z Motor]
17-03-18 04:17:59.474 -07 000000512 INF: FPGA: Recv YRDPOS 148172
17-03-18 04:17:59.474 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 04:17:59.474 -07 000000561 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:59.474 -07 000000561 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:17:59.474 -07 000000561 INF: Y Motor: Moving 1349 steps-27
17-03-18 04:17:59.474 -07 000000487 INF: FPGA: Recv ZDACW
17-03-18 04:17:59.484 -07 000000438 INF: FPGA: 'ZDACW 36513' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 04:17:59.484 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:17:59.494 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:17:59.494 -07 000000437 INF: FPGA: Recv ZDACR 36513
17-03-18 04:17:59.504 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:17:59.504 -07 000000438 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-18 04:17:59.654 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 04:17:59.654 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 04:17:59.654 -07 000000474 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:59.654 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:59.664 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 04:17:59.664 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 04:17:59.664 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:17:59.664 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:17:59.664 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 04:17:59.664 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 04:17:59.834 -07 000000611 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.028963,
17-03-18 04:17:59.854 -07 000000437 INF: FPGA: Recv YMVTILE
17-03-18 04:17:59.854 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-18 04:17:59.914 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:17:59.914 -07 000000444 INF: FPGA: Recv YRDPOS 149865
17-03-18 04:17:59.924 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:17:59.924 -07 000000561 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:17:59.924 -07 000000561 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 04:17:59.924 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.843 mm, average velocity = 2.184 mm/sec
17-03-18 04:18:00.874 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:00.874 -07 000000444 INF: FPGA: Recv YRDPOS 149865
17-03-18 04:18:00.884 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:00.884 -07 000000561 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:00.914 -07 000000561 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:00.914 -07 000000561 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:18:00.914 -07 000000561 INF: Y Motor: Moved to 73.1763 after 1441 ms (table move)
17-03-18 04:18:00.914 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167146 mm (DAC = 36513)
17-03-18 04:18:00.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:00.914 -07 000000611 INF: FPGA: Recv ZSGSRD 35313
17-03-18 04:18:00.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:18:00.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:00.924 -07 000000585 INF: FPGA: Recv ZSGSRD 35305
17-03-18 04:18:00.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:00.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:00.934 -07 000000579 INF: FPGA: Recv ZSGSRD 35312
17-03-18 04:18:00.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:00.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:00.944 -07 000000437 INF: FPGA: Recv ZSGSRD 35318
17-03-18 04:18:00.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:00.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:00.954 -07 000000447 INF: FPGA: Recv ZSGSRD 35309
17-03-18 04:18:00.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:00.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:00.964 -07 000000611 INF: FPGA: Recv ZSGSRD 35301
17-03-18 04:18:00.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:00.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:00.974 -07 000000618 INF: FPGA: Recv ZSGSRD 35308
17-03-18 04:18:00.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:00.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:00.984 -07 000000480 INF: FPGA: Recv ZSGSRD 35307
17-03-18 04:18:00.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:00.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:00.994 -07 000000487 INF: FPGA: Recv ZSGSRD 35311
17-03-18 04:18:01.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:01.004 -07 000000625 INF: FPGA: Recv ZSGSRD 35311
17-03-18 04:18:01.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.014 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:01.014 -07 000000480 INF: FPGA: Recv ZPIEZORD 31023
17-03-18 04:18:01.024 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.024 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.572 V. Piezo Error = -9.4 V.
17-03-18 04:18:01.024 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35310 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35310 (-166.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35301 (-166.2 uncal um), Max = 35318 (-166.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 04:18:01.024 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35310, posNoise = 8, negNoise = 9
17-03-18 04:18:01.024 -07 000000610 INF: Z Motor: After move to -0.167146, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:01.024 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 107 ms (allowed 150 ms), total time = 1551 ms
17-03-18 04:18:01.024 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:01.074 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 04:18:01.074 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:01.074 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.167162282736714. ----------
17-03-18 04:18:01.074 -07 000000610 INF: Cycle	123	Tile	17	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:01.074 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36337, sync = True, waitForSettling = True)
17-03-18 04:18:01.074 -07 000000610 INF: Z Motor: Moving to -0.166340 mm, started at -0.167162 mm, distance = 0.82 um
17-03-18 04:18:01.074 -07 000000610 INF: FPGA: Xmit ZDACW 36337\n [Z Motor]
17-03-18 04:18:01.074 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 04:18:01.084 -07 000000610 INF: FPGA: 'ZDACW 36337' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:01.084 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:01.084 -07 000000585 INF: FPGA: Recv ZDACR 36337
17-03-18 04:18:01.094 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.094 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:01.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:01.244 -07 000000618 INF: FPGA: Recv ZSGSRD 35179
17-03-18 04:18:01.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:01.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:01.254 -07 000000611 INF: FPGA: Recv ZSGSRD 35186
17-03-18 04:18:01.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:01.264 -07 000000479 INF: FPGA: Recv ZSGSRD 35187
17-03-18 04:18:01.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:01.274 -07 000000512 INF: FPGA: Recv ZSGSRD 35181
17-03-18 04:18:01.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:01.284 -07 000000444 INF: FPGA: Recv ZSGSRD 35179
17-03-18 04:18:01.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:01.294 -07 000000512 INF: FPGA: Recv ZSGSRD 35180
17-03-18 04:18:01.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:01.304 -07 000000474 INF: FPGA: Recv ZSGSRD 35185
17-03-18 04:18:01.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:01.314 -07 000000455 INF: FPGA: Recv ZSGSRD 35182
17-03-18 04:18:01.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:01.324 -07 000000474 INF: FPGA: Recv ZSGSRD 35184
17-03-18 04:18:01.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:01.334 -07 000000437 INF: FPGA: Recv ZSGSRD 35187
17-03-18 04:18:01.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.344 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:01.344 -07 000000444 INF: FPGA: Recv ZPIEZORD 30863
17-03-18 04:18:01.354 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:01.354 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.545 V. Piezo Error = -9.5 V.
17-03-18 04:18:01.354 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.3 um, Read 10 ADC samples: Avg = 35183 (-165.5 uncal um), Error = 0.9 uncal um, Median = 35183 (-165.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35179 (-165.5 uncal um), Max = 35187 (-165.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 04:18:01.354 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35183, posNoise = 4, negNoise = 4
17-03-18 04:18:01.354 -07 000000610 INF: Z Motor: After move to -0.166340, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:01.354 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 04:18:01.354 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:01.354 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:01.354 -07 000000479 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:01.354 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:01.354 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:01.354 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:01.354 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 04:18:01.354 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:01.354 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:01.354 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:01.354 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:01.354 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:01.364 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:01.364 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:01.364 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:18:01.364 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:01.374 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 04:18:01.374 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 04:18:01.374 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 04:18:01.374 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 04:18:01.374 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 36513 150\n [Camera]
17-03-18 04:18:01.574 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:01.654 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:01.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:01.994 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:01.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:01.994 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:01.994 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:01.994 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) start.
17-03-18 04:18:01.994 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:01.994 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:01.994 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:01.994 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:01.994 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) start.
17-03-18 04:18:02.184 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36513 803
17-03-18 04:18:02.334 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:02.374 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 04:18:02.374 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 04:18:02.374 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:02.384 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 04:18:02.384 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 04:18:02.384 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:02.384 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:02.384 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 04:18:02.384 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:02.394 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 04:18:02.534 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:02.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:02.534 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:02.534 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:02.534 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) start.
17-03-18 04:18:02.544 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:02.544 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:02.544 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:02.544 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:02.544 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 04:18:02.724 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:18:02.724 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:02.724 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 36513 150' command took 4 ms to send, 1339 ms to get response, and 1354 ms overall
17-03-18 04:18:02.734 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166298
17-03-18 04:18:02.734 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16630 mm
17-03-18 04:18:02.734 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:02.864 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 04:18:02.864 -07 000000012 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-18 04:18:02.864 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:02.864 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 36328, sync = True, waitForSettling = False)
17-03-18 04:18:02.864 -07 000000437 INF: Z Motor: Moving to -0.166299 mm, started at -0.166346 mm, distance = 0.05 um
17-03-18 04:18:02.864 -07 000000438 INF: FPGA: Recv YRDPOS 149865
17-03-18 04:18:02.874 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 04:18:02.874 -07 000000012 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:02.874 -07 000000012 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:02.874 -07 000000012 INF: Y Motor: Moving 1354 steps-33
17-03-18 04:18:02.874 -07 000000437 INF: FPGA: Xmit ZDACW 36328\n [Z Motor]
17-03-18 04:18:02.874 -07 000000480 INF: FPGA: Recv ZDACW
17-03-18 04:18:02.884 -07 000000437 INF: FPGA: 'ZDACW 36328' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 04:18:02.884 -07 000000012 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:02.894 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:02.894 -07 000000608 INF: FPGA: Recv ZDACR 36328
17-03-18 04:18:02.904 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:02.904 -07 000000437 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-18 04:18:02.934 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) end. Duration was 395 ms.
17-03-18 04:18:02.934 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 04:18:02.934 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:02.934 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 393 ms.
17-03-18 04:18:02.934 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 04:18:02.934 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:02.944 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:02.944 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 04:18:02.944 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:02.944 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-18 04:18:03.254 -07 000000625 INF: FPGA: Recv YMVTILE
17-03-18 04:18:03.254 -07 000000012 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 04:18:03.294 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:03.304 -07 000000437 INF: FPGA: Recv YRDPOS 151569
17-03-18 04:18:03.304 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 04:18:03.304 -07 000000012 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:03.304 -07 000000012 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 04:18:03.304 -07 000000012 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.846 mm, average velocity = 2.181 mm/sec
17-03-18 04:18:04.254 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:04.254 -07 000000625 INF: FPGA: Recv YRDPOS 151569
17-03-18 04:18:04.264 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.264 -07 000000012 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:04.284 -07 000000012 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:04.284 -07 000000012 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:18:04.284 -07 000000012 INF: Y Motor: Moved to 74.0083 after 1421 ms (table move)
17-03-18 04:18:04.284 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166299 mm (DAC = 36328)
17-03-18 04:18:04.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.284 -07 000000579 INF: FPGA: Recv ZSGSRD 35181
17-03-18 04:18:04.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:04.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.294 -07 000000585 INF: FPGA: Recv ZSGSRD 35180
17-03-18 04:18:04.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.304 -07 000000455 INF: FPGA: Recv ZSGSRD 35175
17-03-18 04:18:04.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.314 -07 000000012 INF: FPGA: Recv ZSGSRD 35170
17-03-18 04:18:04.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.324 -07 000000611 INF: FPGA: Recv ZSGSRD 35184
17-03-18 04:18:04.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.334 -07 000000579 INF: FPGA: Recv ZSGSRD 35182
17-03-18 04:18:04.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.344 -07 000000447 INF: FPGA: Recv ZSGSRD 35175
17-03-18 04:18:04.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.354 -07 000000579 INF: FPGA: Recv ZSGSRD 35177
17-03-18 04:18:04.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.364 -07 000000480 INF: FPGA: Recv ZSGSRD 35171
17-03-18 04:18:04.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.374 -07 000000455 INF: FPGA: Recv ZSGSRD 35176
17-03-18 04:18:04.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.384 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:04.384 -07 000000611 INF: FPGA: Recv ZPIEZORD 30843
17-03-18 04:18:04.394 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.394 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.543 V. Piezo Error = -9.5 V.
17-03-18 04:18:04.394 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.3 um, Read 10 ADC samples: Avg = 35177 (-165.4 uncal um), Error = 0.9 uncal um, Median = 35176 (-165.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35170 (-165.4 uncal um), Max = 35184 (-165.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:18:04.394 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35177, posNoise = 7, negNoise = 7
17-03-18 04:18:04.394 -07 000000610 INF: Z Motor: After move to -0.166299, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:04.394 -07 000000610 INF: Z Motor: Settle wait time = 1423 ms, measure time = 105 ms (allowed 150 ms), total time = 1528 ms
17-03-18 04:18:04.394 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:04.444 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1708 ms
17-03-18 04:18:04.444 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:04.444 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.16630786252186. ----------
17-03-18 04:18:04.444 -07 000000610 INF: Cycle	123	Tile	18	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:04.444 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36151, sync = True, waitForSettling = True)
17-03-18 04:18:04.444 -07 000000610 INF: Z Motor: Moving to -0.165489 mm, started at -0.166308 mm, distance = 0.82 um
17-03-18 04:18:04.444 -07 000000610 INF: FPGA: Xmit ZDACW 36151\n [Z Motor]
17-03-18 04:18:04.444 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 04:18:04.454 -07 000000610 INF: FPGA: 'ZDACW 36151' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:18:04.454 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:04.454 -07 000000618 INF: FPGA: Recv ZDACR 36151
17-03-18 04:18:04.464 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:04.464 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:04.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.614 -07 000000585 INF: FPGA: Recv ZSGSRD 35051
17-03-18 04:18:04.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:04.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.624 -07 000000479 INF: FPGA: Recv ZSGSRD 35053
17-03-18 04:18:04.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.634 -07 000000590 INF: FPGA: Recv ZSGSRD 35049
17-03-18 04:18:04.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.644 -07 000000625 INF: FPGA: Recv ZSGSRD 35046
17-03-18 04:18:04.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.654 -07 000000437 INF: FPGA: Recv ZSGSRD 35064
17-03-18 04:18:04.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.664 -07 000000625 INF: FPGA: Recv ZSGSRD 35049
17-03-18 04:18:04.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.674 -07 000000437 INF: FPGA: Recv ZSGSRD 35051
17-03-18 04:18:04.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.684 -07 000000625 INF: FPGA: Recv ZSGSRD 35052
17-03-18 04:18:04.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.694 -07 000000512 INF: FPGA: Recv ZSGSRD 35045
17-03-18 04:18:04.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:04.704 -07 000000618 INF: FPGA: Recv ZSGSRD 35060
17-03-18 04:18:04.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.714 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:04.714 -07 000000579 INF: FPGA: Recv ZPIEZORD 30657
17-03-18 04:18:04.724 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:04.724 -07 000000610 INF: Z Motor: Piezo is near 45.5 V (nominally 0 to 100 V), expect near 55.2 V, since DAC is at 5.516 V. Piezo Error = -9.7 V.
17-03-18 04:18:04.724 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.5 um, Read 10 ADC samples: Avg = 35052 (-164.6 uncal um), Error = 0.8 uncal um, Median = 35051 (-164.6 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 35045 (-164.6 uncal um), Max = 35064 (-164.7 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:18:04.724 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35052, posNoise = 12, negNoise = 7
17-03-18 04:18:04.724 -07 000000610 INF: Z Motor: After move to -0.165489, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:04.724 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 04:18:04.724 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:04.724 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:04.724 -07 000000474 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:04.724 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:04.724 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:04.724 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:04.724 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:04.724 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:04.724 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:04.724 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:04.724 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:04.724 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:04.734 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:04.734 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:04.734 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 04:18:04.734 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:04.744 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:18:04.744 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:18:04.744 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 04:18:04.744 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:18:04.744 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 36328 150\n [Camera]
17-03-18 04:18:04.944 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:05.194 -07 000000012 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.042558,
17-03-18 04:18:05.364 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:05.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:05.364 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:05.374 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:05.374 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:05.374 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:05.374 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:05.374 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 04:18:05.374 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:05.374 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 04:18:05.564 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36328 803
17-03-18 04:18:05.714 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:05.754 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 04:18:05.754 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 04:18:05.754 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:05.754 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 04:18:05.754 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 04:18:05.754 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:05.754 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:05.754 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 04:18:05.754 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:05.764 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 04:18:05.914 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1157
17-03-18 04:18:05.914 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1157
17-03-18 04:18:05.914 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:05.914 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:05.914 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) start.
17-03-18 04:18:05.914 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1157
17-03-18 04:18:05.914 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1157
17-03-18 04:18:05.914 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:05.914 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:05.914 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) start.
17-03-18 04:18:06.104 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:18:06.104 -07 000000625 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:06.104 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 36328 150' command took 2 ms to send, 1343 ms to get response, and 1353 ms overall
17-03-18 04:18:06.104 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.165762
17-03-18 04:18:06.104 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16576 mm
17-03-18 04:18:06.104 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:06.104 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 04:18:06.104 -07 000000611 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 04:18:06.104 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 36211, sync = True, waitForSettling = False)
17-03-18 04:18:06.104 -07 000000444 INF: Z Motor: Moving to -0.165763 mm, started at -0.165505 mm, distance = -0.26 um
17-03-18 04:18:06.104 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:06.114 -07 000000444 INF: FPGA: Xmit ZDACW 36211\n [Z Motor]
17-03-18 04:18:06.114 -07 000000501 INF: FPGA: Recv YRDPOS 151569
17-03-18 04:18:06.114 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 04:18:06.114 -07 000000611 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:06.114 -07 000000611 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:06.114 -07 000000611 INF: Y Motor: Moving 1351 steps-29
17-03-18 04:18:06.114 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 04:18:06.124 -07 000000444 INF: FPGA: 'ZDACW 36211' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:06.124 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:06.134 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:06.134 -07 000000501 INF: FPGA: Recv ZDACR 36211
17-03-18 04:18:06.144 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:06.144 -07 000000444 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-18 04:18:06.294 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 04:18:06.294 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 04:18:06.294 -07 000000474 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:06.294 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 04:18:06.294 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 04:18:06.294 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:06.304 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:06.304 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 04:18:06.304 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:06.314 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 04:18:06.494 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 04:18:06.494 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 04:18:06.524 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:06.534 -07 000000437 INF: FPGA: Recv YRDPOS 153255
17-03-18 04:18:06.534 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 04:18:06.534 -07 000000611 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:06.534 -07 000000611 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-18 04:18:06.534 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.844 mm, average velocity = 2.193 mm/sec
17-03-18 04:18:06.654 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:06.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:07.484 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:07.484 -07 000000501 INF: FPGA: Recv YRDPOS 153256
17-03-18 04:18:07.494 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:07.494 -07 000000611 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:07.514 -07 000000611 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:07.514 -07 000000611 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 04:18:07.514 -07 000000611 INF: Y Motor: Moved to 74.8320 after 1403 ms (table move)
17-03-18 04:18:07.514 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.165763 mm (DAC = 36211)
17-03-18 04:18:07.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.514 -07 000000561 INF: FPGA: Recv ZSGSRD 35089
17-03-18 04:18:07.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:18:07.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.524 -07 000000618 INF: FPGA: Recv ZSGSRD 35088
17-03-18 04:18:07.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.534 -07 000000480 INF: FPGA: Recv ZSGSRD 35088
17-03-18 04:18:07.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.544 -07 000000625 INF: FPGA: Recv ZSGSRD 35089
17-03-18 04:18:07.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.554 -07 000000487 INF: FPGA: Recv ZSGSRD 35096
17-03-18 04:18:07.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.564 -07 000000585 INF: FPGA: Recv ZSGSRD 35102
17-03-18 04:18:07.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.574 -07 000000438 INF: FPGA: Recv ZSGSRD 35101
17-03-18 04:18:07.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.584 -07 000000561 INF: FPGA: Recv ZSGSRD 35093
17-03-18 04:18:07.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.594 -07 000000479 INF: FPGA: Recv ZSGSRD 35095
17-03-18 04:18:07.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.604 -07 000000585 INF: FPGA: Recv ZSGSRD 35092
17-03-18 04:18:07.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.614 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:07.614 -07 000000579 INF: FPGA: Recv ZPIEZORD 30732
17-03-18 04:18:07.624 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.624 -07 000000610 INF: Z Motor: Piezo is near 45.7 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.525 V. Piezo Error = -9.6 V.
17-03-18 04:18:07.624 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.8 um, Read 10 ADC samples: Avg = 35093 (-164.9 uncal um), Error = 0.9 uncal um, Median = 35092 (-164.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35088 (-164.9 uncal um), Max = 35102 (-165.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:18:07.624 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35093, posNoise = 9, negNoise = 5
17-03-18 04:18:07.624 -07 000000610 INF: Z Motor: After move to -0.165763, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:07.624 -07 000000610 INF: Z Motor: Settle wait time = 1405 ms, measure time = 106 ms (allowed 150 ms), total time = 1511 ms
17-03-18 04:18:07.624 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:07.674 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1564 ms
17-03-18 04:18:07.674 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:07.674 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.165768228701952. ----------
17-03-18 04:18:07.674 -07 000000610 INF: Cycle	123	Tile	19	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:07.674 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36034, sync = True, waitForSettling = True)
17-03-18 04:18:07.674 -07 000000610 INF: Z Motor: Moving to -0.164953 mm, started at -0.165768 mm, distance = 0.82 um
17-03-18 04:18:07.674 -07 000000610 INF: FPGA: Xmit ZDACW 36034\n [Z Motor]
17-03-18 04:18:07.674 -07 000000480 INF: FPGA: Recv ZDACW
17-03-18 04:18:07.684 -07 000000610 INF: FPGA: 'ZDACW 36034' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:18:07.684 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:07.684 -07 000000437 INF: FPGA: Recv ZDACR 36034
17-03-18 04:18:07.694 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.694 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:07.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.844 -07 000000438 INF: FPGA: Recv ZSGSRD 34963
17-03-18 04:18:07.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.854 -07 000000437 INF: FPGA: Recv ZSGSRD 34969
17-03-18 04:18:07.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.864 -07 000000480 INF: FPGA: Recv ZSGSRD 34966
17-03-18 04:18:07.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.874 -07 000000474 INF: FPGA: Recv ZSGSRD 34966
17-03-18 04:18:07.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.884 -07 000000487 INF: FPGA: Recv ZSGSRD 34970
17-03-18 04:18:07.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.894 -07 000000625 INF: FPGA: Recv ZSGSRD 34975
17-03-18 04:18:07.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.904 -07 000000501 INF: FPGA: Recv ZSGSRD 34966
17-03-18 04:18:07.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.914 -07 000000474 INF: FPGA: Recv ZSGSRD 34965
17-03-18 04:18:07.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.924 -07 000000579 INF: FPGA: Recv ZSGSRD 34963
17-03-18 04:18:07.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:07.934 -07 000000608 INF: FPGA: Recv ZSGSRD 34970
17-03-18 04:18:07.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.944 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:07.944 -07 000000611 INF: FPGA: Recv ZPIEZORD 30589
17-03-18 04:18:07.954 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:07.954 -07 000000610 INF: Z Motor: Piezo is near 45.3 V (nominally 0 to 100 V), expect near 55.0 V, since DAC is at 5.498 V. Piezo Error = -9.6 V.
17-03-18 04:18:07.954 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.0 um, Read 10 ADC samples: Avg = 34967 (-164.1 uncal um), Error = 0.9 uncal um, Median = 34966 (-164.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 34963 (-164.1 uncal um), Max = 34975 (-164.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 04:18:07.954 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34967, posNoise = 8, negNoise = 4
17-03-18 04:18:07.954 -07 000000610 INF: Z Motor: After move to -0.164953, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:07.954 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 04:18:07.954 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:07.954 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:07.954 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:07.954 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:07.954 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:07.954 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:07.954 -07 000000585 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:07.954 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:07.954 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:07.954 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:07.954 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 04:18:07.954 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:07.964 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:07.964 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:07.964 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:18:07.964 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:07.974 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 04:18:07.974 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 04:18:07.974 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 04:18:07.974 -07 000000585 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:18:07.974 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 36211 150\n [Camera]
17-03-18 04:18:08.174 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:08.594 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:08.594 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:08.594 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:08.594 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:08.594 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2369425112, 0x0, 391868352) start.
17-03-18 04:18:08.604 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:08.604 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:08.604 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:08.604 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:08.604 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 04:18:08.794 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36211 803
17-03-18 04:18:08.934 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:08.994 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2369425112, 0x0, 391868352) end. Duration was 391 ms.
17-03-18 04:18:08.994 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 04:18:08.994 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:08.994 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 388 ms.
17-03-18 04:18:08.994 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 04:18:08.994 -07 000000625 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:08.994 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:08.994 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 04:18:08.994 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:09.004 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 04:18:09.144 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:09.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:09.144 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:09.144 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:09.144 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 04:18:09.144 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:09.144 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:09.144 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:09.144 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:09.144 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 04:18:09.334 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:18:09.334 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:09.334 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 36211 150' command took 2 ms to send, 1343 ms to get response, and 1353 ms overall
17-03-18 04:18:09.524 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 04:18:09.524 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 04:18:09.524 -07 000000479 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:09.524 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:09.524 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 04:18:09.524 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 04:18:09.534 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 04:18:09.534 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 04:18:09.534 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:09.534 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:09.544 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 04:18:09.574 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 41 ms.
17-03-18 04:18:09.574 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 04:18:09.614 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 04:18:09.614 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-18 04:18:09.744 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 04:18:09.744 -07 000000501 INF: FPGA: Recv EMCUR 
17-03-18 04:18:09.754 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:09.754 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-18 04:18:10.254 -07 000000625 INF: FPGA: Recv EMIN
17-03-18 04:18:10.254 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 04:18:10.254 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-18 04:18:10.254 -07 000000437 INF: FPGA: Recv EMCUR 
17-03-18 04:18:10.264 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:18:10.264 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 04:18:10.264 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83203125, Z-Position -0.16495877797209. ------
17-03-18 04:18:10.264 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:18:10.264 -07 000000561 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13925 mm
17-03-18 04:18:10.264 -07 000000561 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:10.264 -07 000000590 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:18:10.274 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:18:10.274 -07 000000444 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:18:10.274 -07 000000474 INF: Z Motor: Entering MoveAbsStepped (DAC = 30419, sync = True, waitForSettling = False)
17-03-18 04:18:10.274 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 04:18:10.274 -07 000000512 INF: Y Motor: Moving to 59.9126 mm, started at 74.8320 mm, delta = -14.9194 mm
17-03-18 04:18:10.274 -07 000000474 INF: Z Motor: Moving to -0.139249 mm, started at -0.164959 mm, distance = 25.71 um
17-03-18 04:18:10.284 -07 000000474 INF: FPGA: Xmit ZDACW 30419\n [Z Motor]
17-03-18 04:18:10.284 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 04:18:10.294 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:10.294 -07 000000474 INF: FPGA: 'ZDACW 30419' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 04:18:10.294 -07 000000487 INF: FPGA: Recv YRDPOS 153257
17-03-18 04:18:10.304 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 04:18:10.304 -07 000000512 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:10.304 -07 000000474 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:10.304 -07 000000501 INF: FPGA: Recv ZDACR 30419
17-03-18 04:18:10.304 -07 000000512 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-18 04:18:10.304 -07 000000512 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 04:18:10.314 -07 000000512 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 04:18:10.314 -07 000000474 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:10.314 -07 000000474 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 04:18:10.474 -07 000000455 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:18:10.474 -07 000000444 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 04:18:10.554 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.024884,
17-03-18 04:18:11.654 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:11.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:11.934 -07 000000455 INF: FPGA: Recv YMVTO 122703 23904
17-03-18 04:18:11.934 -07 000000512 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1619 ms to get response, and 1634 ms overall
17-03-18 04:18:11.934 -07 000000512 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 04:18:11.934 -07 000000512 INF: Y Motor: To move from 74.833 to 59.913 (-14.919 mm) should take 23872 steps, but required 23904 steps (14.940 mm). Slippage = 0.020 mm (0.00%).
17-03-18 04:18:11.934 -07 000000512 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1634 ms, distance = 14.919 mm, average velocity = 9.131 mm/sec
17-03-18 04:18:14.784 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:14.784 -07 000000438 INF: FPGA: Recv YRDPOS 122698
17-03-18 04:18:14.794 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:14.794 -07 000000512 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:14.824 -07 000000512 INF: Y Motor: After move to 59.912609, error = -0.001476, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:14.824 -07 000000512 INF: Y Motor: Position error after settling = -3 encoder counts (-0.001 mm), Delta during settling = -5 counts (-0.002 mm)
17-03-18 04:18:14.834 -07 000000512 INF: Y Motor: Moved to 59.9111 after 4558 ms
17-03-18 04:18:14.834 -07 000000561 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139249 mm (DAC = 30419)
17-03-18 04:18:14.834 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:14.834 -07 000000480 INF: FPGA: Recv ZSGSRD 30967
17-03-18 04:18:14.844 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:18:14.844 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:14.844 -07 000000579 INF: FPGA: Recv ZSGSRD 30964
17-03-18 04:18:14.854 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:14.854 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:14.854 -07 000000438 INF: FPGA: Recv ZSGSRD 30963
17-03-18 04:18:14.864 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:14.864 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:14.864 -07 000000608 INF: FPGA: Recv ZSGSRD 30965
17-03-18 04:18:14.874 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:14.874 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:14.874 -07 000000625 INF: FPGA: Recv ZSGSRD 30965
17-03-18 04:18:14.884 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:14.884 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:14.884 -07 000000585 INF: FPGA: Recv ZSGSRD 30970
17-03-18 04:18:14.894 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:14.894 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:14.894 -07 000000579 INF: FPGA: Recv ZSGSRD 30961
17-03-18 04:18:14.904 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:14.904 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:14.904 -07 000000012 INF: FPGA: Recv ZSGSRD 30963
17-03-18 04:18:14.914 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:14.914 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:14.914 -07 000000444 INF: FPGA: Recv ZSGSRD 30961
17-03-18 04:18:14.924 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:14.924 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:14.924 -07 000000501 INF: FPGA: Recv ZSGSRD 30971
17-03-18 04:18:14.934 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:14.934 -07 000000561 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:14.934 -07 000000012 INF: FPGA: Recv ZPIEZORD 26395
17-03-18 04:18:14.944 -07 000000561 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:14.944 -07 000000561 INF: Z Motor: Piezo is near 36.4 V (nominally 0 to 100 V), expect near 46.4 V, since DAC is at 4.642 V. Piezo Error = -10.0 V.
17-03-18 04:18:14.944 -07 000000561 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.2 um, Read 10 ADC samples: Avg = 30965 (-138.4 uncal um), Error = 0.8 uncal um, Median = 30964 (-138.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30961 (-138.4 uncal um), Max = 30971 (-138.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 04:18:14.944 -07 000000561 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30965, posNoise = 6, negNoise = 4
17-03-18 04:18:14.944 -07 000000561 INF: Z Motor: After move to -0.139249, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:14.944 -07 000000561 INF: Z Motor: Settle wait time = 4561 ms, measure time = 107 ms (allowed 150 ms), total time = 4668 ms
17-03-18 04:18:14.944 -07 000000561 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:14.994 -07 000000561 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4723 ms
17-03-18 04:18:14.994 -07 000000561 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:14.994 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:14.994 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:14.994 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:14.994 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:14.994 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:18:14.994 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:14.994 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:14.994 -07 000000618 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 04:18:15.024 -07 000000618 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 04:18:15.024 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:18:15.024 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 04:18:15.024 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:18:15.044 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 04:18:15.044 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms.
17-03-18 04:18:15.044 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:18:15.084 -07 000000579 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:18:15.384 -07 000000561 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:18:15.394 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:18:15.394 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:18:15.394 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-18 04:18:15.434 -07 000000611 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:18:15.434 -07 000000447 INF: FPGA: Recv CAMSNAP
17-03-18 04:18:15.434 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 388 ms overall
17-03-18 04:18:15.504 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 116 ms.
17-03-18 04:18:15.504 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:15.514 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:18:15.514 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-18 04:18:15.534 -07 000000625 INF: Image SNR check: start
17-03-18 04:18:15.534 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:18:15.534 -07 000000590 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:18:15.544 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:18:15.544 -07 000000501 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:18:15.544 -07 000000625 INF: Image SNR check: pass  [peak (Max-Min)=129.00]
17-03-18 04:18:15.544 -07 000000625 INF: Autofocus start
17-03-18 04:18:15.544 -07 000000625 INF: MeasureProfile start
17-03-18 04:18:15.554 -07 000000625 INF: MeasureProfile done
17-03-18 04:18:15.564 -07 000000625 INF: X=32  Z correction [um]=0.1299841
17-03-18 04:18:15.564 -07 000000625 INF: Autofocus finished
17-03-18 04:18:15.744 -07 000000474 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:18:15.744 -07 000000501 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 04:18:15.744 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.9111328125, Z-position -0.139249080980763. ----------
17-03-18 04:18:15.744 -07 000000610 INF: Cycle	123	Tile	1	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:15.754 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28960, sync = True, waitForSettling = True)
17-03-18 04:18:15.754 -07 000000610 INF: Z Motor: Moving to -0.132570 mm, started at -0.139249 mm, distance = 6.68 um
17-03-18 04:18:15.754 -07 000000610 INF: FPGA: Xmit ZDACW 28960\n [Z Motor]
17-03-18 04:18:15.754 -07 000000625 INF: FPGA: Recv ZDACW
17-03-18 04:18:15.764 -07 000000610 INF: FPGA: 'ZDACW 28960' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:15.764 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:15.764 -07 000000474 INF: FPGA: Recv ZDACR 28960
17-03-18 04:18:15.774 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:15.774 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:15.914 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.003063,
17-03-18 04:18:15.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:15.924 -07 000000455 INF: FPGA: Recv ZSGSRD 29929
17-03-18 04:18:15.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:15.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:15.954 -07 000000608 INF: FPGA: Recv ZSGSRD 29927
17-03-18 04:18:15.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 04:18:15.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:15.964 -07 000000455 INF: FPGA: Recv ZSGSRD 29925
17-03-18 04:18:15.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:15.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:15.984 -07 000000561 INF: FPGA: Recv ZSGSRD 29925
17-03-18 04:18:15.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:15.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:15.994 -07 000000585 INF: FPGA: Recv ZSGSRD 29927
17-03-18 04:18:16.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:16.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:16.004 -07 000000487 INF: FPGA: Recv ZSGSRD 29920
17-03-18 04:18:16.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:16.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:16.014 -07 000000455 INF: FPGA: Recv ZSGSRD 29924
17-03-18 04:18:16.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:16.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:16.024 -07 000000012 INF: FPGA: Recv ZSGSRD 29931
17-03-18 04:18:16.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:16.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:16.034 -07 000000437 INF: FPGA: Recv ZSGSRD 29927
17-03-18 04:18:16.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:16.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:16.044 -07 000000585 INF: FPGA: Recv ZSGSRD 29930
17-03-18 04:18:16.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:16.054 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:16.054 -07 000000480 INF: FPGA: Recv ZPIEZORD 25297
17-03-18 04:18:16.064 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:16.064 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.419 V. Piezo Error = -10.1 V.
17-03-18 04:18:16.064 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.6 um, Read 10 ADC samples: Avg = 29926 (-131.8 uncal um), Error = 0.8 uncal um, Median = 29927 (-131.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29920 (-131.8 uncal um), Max = 29931 (-131.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:18:16.064 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29926, posNoise = 5, negNoise = 6
17-03-18 04:18:16.064 -07 000000610 INF: Z Motor: After move to -0.132570, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:16.064 -07 000000610 INF: Z Motor: MoveAbsStepped took 310 ms)
17-03-18 04:18:16.064 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:16.064 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:16.064 -07 000000474 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:16.064 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:16.064 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:16.064 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:16.064 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:16.064 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:16.064 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:16.064 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:16.064 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:16.064 -07 000000447 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 04:18:16.074 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:16.074 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:16.074 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 04:18:16.074 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 04:18:16.084 -07 000000447 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-18 04:18:16.084 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:16.084 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 04:18:16.084 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:16.094 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 04:18:16.094 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 32 ms.
17-03-18 04:18:16.104 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 29137 150\n [Camera]
17-03-18 04:18:16.294 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:16.654 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:16.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:16.714 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:16.714 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:16.714 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:16.714 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:16.714 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 04:18:16.724 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:16.724 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:16.724 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:16.724 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:16.724 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) start.
17-03-18 04:18:16.914 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29137 803
17-03-18 04:18:17.064 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:17.104 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 04:18:17.104 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 04:18:17.104 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:17.104 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 04:18:17.104 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 04:18:17.104 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:17.114 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:17.114 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 04:18:17.114 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:17.114 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 04:18:17.264 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:17.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:17.264 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:17.264 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:17.264 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) start.
17-03-18 04:18:17.264 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:17.264 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:17.264 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:17.264 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:17.264 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) start.
17-03-18 04:18:17.454 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:18:17.454 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:17.454 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 29137 150' command took 2 ms to send, 1344 ms to get response, and 1353 ms overall
17-03-18 04:18:17.454 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.132974
17-03-18 04:18:17.454 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13297 mm
17-03-18 04:18:17.454 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:17.454 -07 000000447 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 04:18:17.454 -07 000000447 INF: Y Motor: Moving to 60.7426 mm, started at 59.9111 mm, delta = 0.8315 mm
17-03-18 04:18:17.454 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:17.454 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 29048, sync = True, waitForSettling = False)
17-03-18 04:18:17.454 -07 000000611 INF: Z Motor: Moving to -0.132973 mm, started at -0.132574 mm, distance = -0.40 um
17-03-18 04:18:17.464 -07 000000611 INF: FPGA: Xmit ZDACW 29048\n [Z Motor]
17-03-18 04:18:17.464 -07 000000479 INF: FPGA: Recv YRDPOS 122698
17-03-18 04:18:17.464 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 04:18:17.464 -07 000000447 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:17.464 -07 000000447 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:17.464 -07 000000447 INF: Y Motor: Moving 1330 steps2
17-03-18 04:18:17.464 -07 000000608 INF: FPGA: Recv ZDACW
17-03-18 04:18:17.474 -07 000000611 INF: FPGA: 'ZDACW 29048' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:17.474 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:17.474 -07 000000479 INF: FPGA: Recv ZDACR 29048
17-03-18 04:18:17.484 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:17.484 -07 000000611 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 04:18:17.484 -07 000000447 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:17.664 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) end. Duration was 398 ms.
17-03-18 04:18:17.664 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 04:18:17.664 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:17.664 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) end. Duration was 397 ms.
17-03-18 04:18:17.664 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 04:18:17.664 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:17.664 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:17.664 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 04:18:17.664 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 04:18:17.674 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-18 04:18:17.854 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 04:18:17.854 -07 000000447 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 263 ms to get response, and 396 ms overall
17-03-18 04:18:17.894 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:17.904 -07 000000487 INF: FPGA: Recv YRDPOS 124381
17-03-18 04:18:17.904 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 04:18:17.904 -07 000000447 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:17.904 -07 000000447 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 04:18:17.904 -07 000000447 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.831 mm, average velocity = 2.100 mm/sec
17-03-18 04:18:18.854 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:18.854 -07 000000480 INF: FPGA: Recv YRDPOS 124382
17-03-18 04:18:18.864 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:18.864 -07 000000447 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:18.884 -07 000000447 INF: Y Motor: After move to 60.742607, error = -0.009209, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:18.894 -07 000000447 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 04:18:18.894 -07 000000447 INF: Y Motor: Moved to 60.7334 after 1431 ms (table move)
17-03-18 04:18:18.894 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132973 mm (DAC = 29048)
17-03-18 04:18:18.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:18.894 -07 000000487 INF: FPGA: Recv ZSGSRD 29991
17-03-18 04:18:18.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:18:18.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:18.904 -07 000000608 INF: FPGA: Recv ZSGSRD 29993
17-03-18 04:18:18.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:18.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:18.914 -07 000000474 INF: FPGA: Recv ZSGSRD 29983
17-03-18 04:18:18.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:18.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:18.924 -07 000000608 INF: FPGA: Recv ZSGSRD 29989
17-03-18 04:18:18.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:18.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:18.934 -07 000000618 INF: FPGA: Recv ZSGSRD 29991
17-03-18 04:18:18.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:18.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:18.944 -07 000000480 INF: FPGA: Recv ZSGSRD 29992
17-03-18 04:18:18.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:18.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:18.954 -07 000000447 INF: FPGA: Recv ZSGSRD 29987
17-03-18 04:18:18.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:18.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:18.964 -07 000000479 INF: FPGA: Recv ZSGSRD 29982
17-03-18 04:18:18.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:18.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:18.974 -07 000000444 INF: FPGA: Recv ZSGSRD 29990
17-03-18 04:18:18.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:18.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:18.984 -07 000000561 INF: FPGA: Recv ZSGSRD 29990
17-03-18 04:18:18.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:18.994 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:18.994 -07 000000608 INF: FPGA: Recv ZPIEZORD 25454
17-03-18 04:18:19.004 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.004 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.432 V. Piezo Error = -9.9 V.
17-03-18 04:18:19.004 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.0 um, Read 10 ADC samples: Avg = 29989 (-132.2 uncal um), Error = 0.8 uncal um, Median = 29990 (-132.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29982 (-132.1 uncal um), Max = 29993 (-132.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:18:19.004 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29989, posNoise = 4, negNoise = 7
17-03-18 04:18:19.004 -07 000000610 INF: Z Motor: After move to -0.132973, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:19.004 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 110 ms (allowed 150 ms), total time = 1543 ms
17-03-18 04:18:19.004 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:19.044 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1583 ms
17-03-18 04:18:19.044 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:19.044 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.7333984375, Z-position -0.132979049930404. ----------
17-03-18 04:18:19.044 -07 000000610 INF: Cycle	123	Tile	2	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:19.044 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28871, sync = True, waitForSettling = True)
17-03-18 04:18:19.044 -07 000000610 INF: Z Motor: Moving to -0.132163 mm, started at -0.132979 mm, distance = 0.82 um
17-03-18 04:18:19.044 -07 000000610 INF: FPGA: Xmit ZDACW 28871\n [Z Motor]
17-03-18 04:18:19.044 -07 000000625 INF: FPGA: Recv ZDACW
17-03-18 04:18:19.054 -07 000000610 INF: FPGA: 'ZDACW 28871' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:18:19.054 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:19.054 -07 000000611 INF: FPGA: Recv ZDACR 28871
17-03-18 04:18:19.064 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.064 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:19.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:19.214 -07 000000437 INF: FPGA: Recv ZSGSRD 29865
17-03-18 04:18:19.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:19.224 -07 000000585 INF: FPGA: Recv ZSGSRD 29865
17-03-18 04:18:19.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:19.234 -07 000000447 INF: FPGA: Recv ZSGSRD 29862
17-03-18 04:18:19.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:19.244 -07 000000585 INF: FPGA: Recv ZSGSRD 29865
17-03-18 04:18:19.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:19.254 -07 000000437 INF: FPGA: Recv ZSGSRD 29865
17-03-18 04:18:19.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:19.264 -07 000000438 INF: FPGA: Recv ZSGSRD 29863
17-03-18 04:18:19.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:19.274 -07 000000590 INF: FPGA: Recv ZSGSRD 29865
17-03-18 04:18:19.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:19.284 -07 000000480 INF: FPGA: Recv ZSGSRD 29857
17-03-18 04:18:19.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:19.294 -07 000000585 INF: FPGA: Recv ZSGSRD 29860
17-03-18 04:18:19.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:19.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:19.304 -07 000000487 INF: FPGA: Recv ZSGSRD 29859
17-03-18 04:18:19.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.314 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:19.314 -07 000000626 INF: FPGA: Recv ZPIEZORD 25279
17-03-18 04:18:19.324 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:19.324 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.405 V. Piezo Error = -10.1 V.
17-03-18 04:18:19.324 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29863 (-131.4 uncal um), Error = 0.8 uncal um, Median = 29864 (-131.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29857 (-131.3 uncal um), Max = 29865 (-131.4 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:18:19.324 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29863, posNoise = 2, negNoise = 6
17-03-18 04:18:19.324 -07 000000610 INF: Z Motor: After move to -0.132163, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:19.324 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 04:18:19.324 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:19.324 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:19.324 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:19.324 -07 000000437 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:19.324 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:19.324 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:19.324 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:19.324 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:19.324 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:19.324 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:19.324 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:19.324 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:19.334 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:18:19.334 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:19.334 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:19.334 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:19.344 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 04:18:19.344 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:18:19.344 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:18:19.344 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:18:19.344 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 29048 150\n [Camera]
17-03-18 04:18:19.544 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:19.964 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:19.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:19.964 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:19.974 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:19.974 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:19.974 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:19.974 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:19.974 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 04:18:19.984 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:19.984 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 04:18:20.164 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29048 803
17-03-18 04:18:20.304 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:20.374 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 04:18:20.374 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 04:18:20.374 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:20.374 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 393 ms.
17-03-18 04:18:20.374 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 04:18:20.374 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:20.374 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:20.374 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 04:18:20.374 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:20.384 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-18 04:18:20.514 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:20.514 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:20.514 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:20.514 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:20.514 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:20.514 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:20.514 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:20.514 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1111624864, 0x0, 418435064) start.
17-03-18 04:18:20.514 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:20.514 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) start.
17-03-18 04:18:20.704 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:18:20.704 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:20.704 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 29048 150' command took 2 ms to send, 1343 ms to get response, and 1353 ms overall
17-03-18 04:18:20.704 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.132912
17-03-18 04:18:20.704 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13291 mm
17-03-18 04:18:20.704 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:20.704 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 04:18:20.704 -07 000000618 INF: Y Motor: Moving to 61.5726 mm, started at 60.7334 mm, delta = 0.8392 mm
17-03-18 04:18:20.704 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:20.704 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 29035, sync = True, waitForSettling = False)
17-03-18 04:18:20.704 -07 000000611 INF: Z Motor: Moving to -0.132914 mm, started at -0.132170 mm, distance = -0.74 um
17-03-18 04:18:20.714 -07 000000611 INF: FPGA: Xmit ZDACW 29035\n [Z Motor]
17-03-18 04:18:20.714 -07 000000579 INF: FPGA: Recv YRDPOS 124382
17-03-18 04:18:20.714 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:18:20.714 -07 000000618 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:20.714 -07 000000618 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:20.714 -07 000000618 INF: Y Motor: Moving 1343 steps-20
17-03-18 04:18:20.714 -07 000000437 INF: FPGA: Recv ZDACW
17-03-18 04:18:20.724 -07 000000611 INF: FPGA: 'ZDACW 29035' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 04:18:20.724 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:20.724 -07 000000455 INF: FPGA: Recv ZDACR 29035
17-03-18 04:18:20.734 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:20.734 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:20.734 -07 000000611 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 04:18:20.914 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 04:18:20.914 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 04:18:20.914 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:20.924 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1111624864, 0x0, 418435064) end. Duration was 402 ms.
17-03-18 04:18:20.924 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 04:18:20.924 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:20.924 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:20.924 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms.
17-03-18 04:18:20.924 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:20.934 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-18 04:18:21.104 -07 000000479 INF: FPGA: Recv YMVTILE
17-03-18 04:18:21.104 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall
17-03-18 04:18:21.154 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:21.154 -07 000000474 INF: FPGA: Recv YRDPOS 126082
17-03-18 04:18:21.164 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:18:21.164 -07 000000618 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:21.164 -07 000000618 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 04:18:21.164 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.839 mm, average velocity = 2.119 mm/sec
17-03-18 04:18:21.304 -07 000000585 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.012614,
17-03-18 04:18:21.654 -07 000000474 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:21.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:22.114 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:22.114 -07 000000474 INF: FPGA: Recv YRDPOS 126083
17-03-18 04:18:22.124 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:22.124 -07 000000618 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:22.154 -07 000000618 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:22.154 -07 000000618 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 04:18:22.154 -07 000000618 INF: Y Motor: Moved to 61.5640 after 1442 ms (table move)
17-03-18 04:18:22.154 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132914 mm (DAC = 29035)
17-03-18 04:18:22.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.154 -07 000000501 INF: FPGA: Recv ZSGSRD 29984
17-03-18 04:18:22.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:18:22.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.164 -07 000000438 INF: FPGA: Recv ZSGSRD 29977
17-03-18 04:18:22.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.174 -07 000000447 INF: FPGA: Recv ZSGSRD 29980
17-03-18 04:18:22.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.184 -07 000000480 INF: FPGA: Recv ZSGSRD 29983
17-03-18 04:18:22.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.194 -07 000000590 INF: FPGA: Recv ZSGSRD 29981
17-03-18 04:18:22.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.204 -07 000000479 INF: FPGA: Recv ZSGSRD 29979
17-03-18 04:18:22.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.214 -07 000000579 INF: FPGA: Recv ZSGSRD 29976
17-03-18 04:18:22.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.224 -07 000000455 INF: FPGA: Recv ZSGSRD 29978
17-03-18 04:18:22.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.234 -07 000000480 INF: FPGA: Recv ZSGSRD 29974
17-03-18 04:18:22.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.244 -07 000000611 INF: FPGA: Recv ZSGSRD 29980
17-03-18 04:18:22.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.254 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:22.254 -07 000000585 INF: FPGA: Recv ZPIEZORD 25494
17-03-18 04:18:22.264 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.264 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.430 V. Piezo Error = -9.8 V.
17-03-18 04:18:22.264 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.9 um, Read 10 ADC samples: Avg = 29979 (-132.1 uncal um), Error = 0.8 uncal um, Median = 29980 (-132.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29974 (-132.1 uncal um), Max = 29984 (-132.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:18:22.264 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29979, posNoise = 5, negNoise = 5
17-03-18 04:18:22.264 -07 000000610 INF: Z Motor: After move to -0.132914, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:22.264 -07 000000610 INF: Z Motor: Settle wait time = 1441 ms, measure time = 108 ms (allowed 150 ms), total time = 1549 ms
17-03-18 04:18:22.264 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:22.314 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 04:18:22.314 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:22.314 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.132914807808987. ----------
17-03-18 04:18:22.314 -07 000000610 INF: Cycle	123	Tile	3	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:22.314 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28858, sync = True, waitForSettling = True)
17-03-18 04:18:22.314 -07 000000610 INF: Z Motor: Moving to -0.132103 mm, started at -0.132915 mm, distance = 0.81 um
17-03-18 04:18:22.314 -07 000000610 INF: FPGA: Xmit ZDACW 28858\n [Z Motor]
17-03-18 04:18:22.314 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 04:18:22.324 -07 000000610 INF: FPGA: 'ZDACW 28858' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:22.324 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:22.324 -07 000000437 INF: FPGA: Recv ZDACR 28858
17-03-18 04:18:22.334 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.334 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:22.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.484 -07 000000618 INF: FPGA: Recv ZSGSRD 29855
17-03-18 04:18:22.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:22.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.494 -07 000000501 INF: FPGA: Recv ZSGSRD 29859
17-03-18 04:18:22.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.504 -07 000000012 INF: FPGA: Recv ZSGSRD 29858
17-03-18 04:18:22.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.514 -07 000000611 INF: FPGA: Recv ZSGSRD 29858
17-03-18 04:18:22.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.524 -07 000000585 INF: FPGA: Recv ZSGSRD 29851
17-03-18 04:18:22.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.534 -07 000000487 INF: FPGA: Recv ZSGSRD 29852
17-03-18 04:18:22.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.544 -07 000000455 INF: FPGA: Recv ZSGSRD 29854
17-03-18 04:18:22.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.554 -07 000000590 INF: FPGA: Recv ZSGSRD 29855
17-03-18 04:18:22.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.564 -07 000000512 INF: FPGA: Recv ZSGSRD 29854
17-03-18 04:18:22.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:22.574 -07 000000447 INF: FPGA: Recv ZSGSRD 29857
17-03-18 04:18:22.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:22.584 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:22.584 -07 000000626 INF: FPGA: Recv ZPIEZORD 25320
17-03-18 04:18:22.594 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:22.594 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.403 V. Piezo Error = -9.9 V.
17-03-18 04:18:22.594 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.1 um, Read 10 ADC samples: Avg = 29855 (-131.3 uncal um), Error = 0.8 uncal um, Median = 29855 (-131.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29851 (-131.3 uncal um), Max = 29859 (-131.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 04:18:22.594 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29855, posNoise = 4, negNoise = 4
17-03-18 04:18:22.594 -07 000000610 INF: Z Motor: After move to -0.132103, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:22.594 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 04:18:22.594 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:22.594 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:22.594 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:22.594 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:22.594 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:22.594 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:22.594 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:22.594 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:22.594 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:22.594 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:22.594 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:22.594 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:22.604 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:22.604 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:22.604 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 04:18:22.604 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:22.614 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 04:18:22.614 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:18:22.614 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 04:18:22.614 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 04:18:22.624 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 29035 150\n [Camera]
17-03-18 04:18:22.814 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:23.234 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:23.234 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:23.234 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:23.234 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:23.234 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) start.
17-03-18 04:18:23.244 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:23.244 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:23.244 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:23.244 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:23.244 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 04:18:23.434 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29035 803
17-03-18 04:18:23.584 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:23.644 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) end. Duration was 403 ms.
17-03-18 04:18:23.644 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 04:18:23.644 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:23.644 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 402 ms.
17-03-18 04:18:23.644 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 04:18:23.644 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:23.644 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:23.644 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 04:18:23.654 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:23.664 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 418 ms.
17-03-18 04:18:23.784 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:23.784 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:23.784 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:23.784 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:23.784 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 04:18:23.784 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:23.784 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:23.784 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:23.784 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:23.784 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 04:18:23.974 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:18:23.974 -07 000000437 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:23.974 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 29035 150' command took 2 ms to send, 1343 ms to get response, and 1353 ms overall
17-03-18 04:18:23.974 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 04:18:23.974 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56396484375, Z-Position -0.132118205503408. ------
17-03-18 04:18:23.984 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:18:23.984 -07 000000608 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13845 mm
17-03-18 04:18:23.984 -07 000000608 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:23.984 -07 000000561 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:18:23.984 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 04:18:23.984 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 30245, sync = True, waitForSettling = False)
17-03-18 04:18:23.984 -07 000000444 INF: Z Motor: Moving to -0.138453 mm, started at -0.132118 mm, distance = -6.33 um
17-03-18 04:18:23.984 -07 000000012 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 04:18:23.994 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:23.994 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:23.994 -07 000000501 INF: FPGA: Recv YRDPOS 126083
17-03-18 04:18:24.004 -07 000000444 INF: FPGA: Xmit ZDACW 30245\n [Z Motor]
17-03-18 04:18:24.004 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 04:18:24.004 -07 000000012 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:24.004 -07 000000012 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:24.004 -07 000000012 INF: Y Motor: Moving 1342 steps-19
17-03-18 04:18:24.004 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 04:18:24.014 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:18:24.014 -07 000000444 INF: FPGA: 'ZDACW 30245' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 04:18:24.024 -07 000000012 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:24.034 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:24.034 -07 000000625 INF: FPGA: Recv ZDACR 30245
17-03-18 04:18:24.044 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 04:18:24.044 -07 000000444 INF: Z Motor: MoveAbsStepped took 55 ms (did NOT wait for settling yet))
17-03-18 04:18:24.164 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 04:18:24.164 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 04:18:24.164 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:24.164 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 04:18:24.164 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 04:18:24.164 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:24.164 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:24.164 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 04:18:24.164 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:24.174 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 04:18:24.214 -07 000000455 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:18:24.214 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 04:18:24.394 -07 000000487 INF: FPGA: Recv YMVTILE
17-03-18 04:18:24.394 -07 000000012 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 04:18:24.444 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:24.454 -07 000000501 INF: FPGA: Recv YRDPOS 127786
17-03-18 04:18:24.454 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 3 ms to get response, and 4 ms overall
17-03-18 04:18:24.454 -07 000000012 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:24.454 -07 000000012 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 04:18:24.454 -07 000000012 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.112 mm/sec
17-03-18 04:18:25.404 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:25.404 -07 000000437 INF: FPGA: Recv YRDPOS 127786
17-03-18 04:18:25.414 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:25.414 -07 000000012 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:25.434 -07 000000012 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:25.434 -07 000000012 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:18:25.434 -07 000000012 INF: Y Motor: Moved to 62.3955 after 1455 ms (table move)
17-03-18 04:18:25.444 -07 000000608 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138453 mm (DAC = 30245)
17-03-18 04:18:25.444 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:25.444 -07 000000474 INF: FPGA: Recv ZSGSRD 30846
17-03-18 04:18:25.454 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:18:25.454 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:25.454 -07 000000590 INF: FPGA: Recv ZSGSRD 30846
17-03-18 04:18:25.464 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:25.464 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:25.464 -07 000000618 INF: FPGA: Recv ZSGSRD 30847
17-03-18 04:18:25.474 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:25.474 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:25.474 -07 000000487 INF: FPGA: Recv ZSGSRD 30841
17-03-18 04:18:25.484 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:25.484 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:25.484 -07 000000447 INF: FPGA: Recv ZSGSRD 30846
17-03-18 04:18:25.494 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:25.494 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:25.494 -07 000000480 INF: FPGA: Recv ZSGSRD 30837
17-03-18 04:18:25.504 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:25.504 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:25.504 -07 000000590 INF: FPGA: Recv ZSGSRD 30840
17-03-18 04:18:25.514 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:25.514 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:25.514 -07 000000618 INF: FPGA: Recv ZSGSRD 30836
17-03-18 04:18:25.524 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:25.524 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:25.524 -07 000000444 INF: FPGA: Recv ZSGSRD 30841
17-03-18 04:18:25.534 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:25.534 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:25.534 -07 000000447 INF: FPGA: Recv ZSGSRD 30852
17-03-18 04:18:25.544 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:25.544 -07 000000608 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:25.544 -07 000000479 INF: FPGA: Recv ZPIEZORD 26590
17-03-18 04:18:25.554 -07 000000608 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:25.554 -07 000000608 INF: Z Motor: Piezo is near 36.8 V (nominally 0 to 100 V), expect near 46.2 V, since DAC is at 4.615 V. Piezo Error = -9.3 V.
17-03-18 04:18:25.554 -07 000000608 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.5 um, Read 10 ADC samples: Avg = 30843 (-137.7 uncal um), Error = 0.8 uncal um, Median = 30844 (-137.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 30836 (-137.6 uncal um), Max = 30852 (-137.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:18:25.554 -07 000000608 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30843, posNoise = 9, negNoise = 7
17-03-18 04:18:25.554 -07 000000608 INF: Z Motor: After move to -0.138453, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:25.554 -07 000000608 INF: Z Motor: Settle wait time = 1458 ms, measure time = 108 ms (allowed 150 ms), total time = 1566 ms
17-03-18 04:18:25.554 -07 000000608 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:25.604 -07 000000608 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1619 ms
17-03-18 04:18:25.604 -07 000000608 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:25.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:25.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:25.604 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:25.604 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:25.614 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:18:25.614 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:25.614 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:25.614 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:18:25.614 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:18:25.614 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:18:25.624 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 04:18:25.624 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-18 04:18:25.624 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:18:25.674 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:18:25.974 -07 000000611 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:18:25.974 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:18:25.974 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:18:25.974 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1077874736, 0x0, 559484976) start.
17-03-18 04:18:26.014 -07 000000447 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:18:26.014 -07 000000585 INF: FPGA: Recv CAMSNAP
17-03-18 04:18:26.014 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 2 ms to send, 384 ms to get response, and 387 ms overall
17-03-18 04:18:26.104 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1077874736, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 04:18:26.104 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:26.104 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:18:26.104 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 04:18:26.114 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:18:26.114 -07 000000437 INF: Autofocus start
17-03-18 04:18:26.114 -07 000000437 INF: MeasureProfile start
17-03-18 04:18:26.114 -07 000000561 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:18:26.124 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:18:26.124 -07 000000579 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:18:26.124 -07 000000437 INF: MeasureProfile done
17-03-18 04:18:26.124 -07 000000437 INF: X=16  Z correction [um]=0.0530179
17-03-18 04:18:26.124 -07 000000437 INF: Autofocus finished
17-03-18 04:18:26.324 -07 000000480 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:18:26.324 -07 000000579 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 04:18:26.324 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.138465327099468. ----------
17-03-18 04:18:26.334 -07 000000610 INF: Cycle	123	Tile	4	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:26.334 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28769, sync = True, waitForSettling = True)
17-03-18 04:18:26.334 -07 000000610 INF: Z Motor: Moving to -0.131696 mm, started at -0.138465 mm, distance = 6.77 um
17-03-18 04:18:26.334 -07 000000610 INF: FPGA: Xmit ZDACW 28769\n [Z Motor]
17-03-18 04:18:26.334 -07 000000487 INF: FPGA: Recv ZDACW
17-03-18 04:18:26.344 -07 000000610 INF: FPGA: 'ZDACW 28769' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:18:26.354 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:26.354 -07 000000579 INF: FPGA: Recv ZDACR 28769
17-03-18 04:18:26.364 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:26.364 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:26.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:26.514 -07 000000608 INF: FPGA: Recv ZSGSRD 29789
17-03-18 04:18:26.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:26.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:26.524 -07 000000579 INF: FPGA: Recv ZSGSRD 29785
17-03-18 04:18:26.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:26.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:26.534 -07 000000611 INF: FPGA: Recv ZSGSRD 29786
17-03-18 04:18:26.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:26.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:26.544 -07 000000561 INF: FPGA: Recv ZSGSRD 29791
17-03-18 04:18:26.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:26.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:26.554 -07 000000447 INF: FPGA: Recv ZSGSRD 29789
17-03-18 04:18:26.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:26.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:26.564 -07 000000012 INF: FPGA: Recv ZSGSRD 29786
17-03-18 04:18:26.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:26.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:26.574 -07 000000625 INF: FPGA: Recv ZSGSRD 29796
17-03-18 04:18:26.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:26.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:26.584 -07 000000611 INF: FPGA: Recv ZSGSRD 29792
17-03-18 04:18:26.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:26.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:26.594 -07 000000561 INF: FPGA: Recv ZSGSRD 29784
17-03-18 04:18:26.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:26.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:26.604 -07 000000447 INF: FPGA: Recv ZSGSRD 29790
17-03-18 04:18:26.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:26.614 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:26.614 -07 000000438 INF: FPGA: Recv ZPIEZORD 25214
17-03-18 04:18:26.624 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:26.624 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.390 V. Piezo Error = -10.0 V.
17-03-18 04:18:26.624 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29789 (-130.9 uncal um), Error = 0.8 uncal um, Median = 29789 (-130.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29784 (-130.9 uncal um), Max = 29796 (-131.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:18:26.624 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29789, posNoise = 7, negNoise = 5
17-03-18 04:18:26.624 -07 000000610 INF: Z Motor: After move to -0.131696, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:26.624 -07 000000610 INF: Z Motor: MoveAbsStepped took 289 ms)
17-03-18 04:18:26.624 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:26.624 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:26.624 -07 000000585 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:26.624 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:26.624 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:26.624 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:26.624 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:26.624 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:26.624 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 04:18:26.624 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:26.624 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:26.624 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:26.624 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:18:26.634 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:26.634 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:26.634 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:26.634 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 04:18:26.634 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 04:18:26.634 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 04:18:26.634 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 04:18:26.644 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28946 150\n [Camera]
17-03-18 04:18:26.654 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:26.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:26.664 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.024884,
17-03-18 04:18:26.844 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:27.254 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:27.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:27.264 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:27.264 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:27.264 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 04:18:27.264 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:27.264 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:27.264 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:27.264 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:27.264 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 04:18:27.454 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28946 803
17-03-18 04:18:27.604 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:27.644 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 04:18:27.644 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 04:18:27.644 -07 000000479 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:27.644 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 04:18:27.644 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 04:18:27.644 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:27.644 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:27.644 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:27.644 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 04:18:27.654 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 04:18:27.804 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:27.804 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:27.804 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:27.804 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:27.804 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 04:18:27.804 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:27.804 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:27.804 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:27.804 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:27.804 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 04:18:27.994 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:18:27.994 -07 000000487 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:27.994 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28946 150' command took 2 ms to send, 1345 ms to get response, and 1353 ms overall
17-03-18 04:18:27.994 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.132484
17-03-18 04:18:27.994 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13248 mm
17-03-18 04:18:27.994 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:28.004 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 04:18:28.004 -07 000000438 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 04:18:28.004 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 28941, sync = True, waitForSettling = False)
17-03-18 04:18:28.004 -07 000000618 INF: Z Motor: Moving to -0.132483 mm, started at -0.131694 mm, distance = -0.79 um
17-03-18 04:18:28.004 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:28.004 -07 000000590 INF: FPGA: Recv YRDPOS 127786
17-03-18 04:18:28.014 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:28.014 -07 000000618 INF: FPGA: Xmit ZDACW 28941\n [Z Motor]
17-03-18 04:18:28.014 -07 000000438 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:28.014 -07 000000438 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:28.014 -07 000000438 INF: Y Motor: Moving 1339 steps-15
17-03-18 04:18:28.014 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 04:18:28.024 -07 000000618 INF: FPGA: 'ZDACW 28941' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:28.024 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:28.024 -07 000000625 INF: FPGA: Recv ZDACR 28941
17-03-18 04:18:28.034 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:28.034 -07 000000618 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 04:18:28.034 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:28.204 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 04:18:28.204 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 04:18:28.204 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:28.204 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 398 ms.
17-03-18 04:18:28.204 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 04:18:28.204 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:28.204 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:28.214 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 04:18:28.214 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms.
17-03-18 04:18:28.214 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-18 04:18:28.404 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 04:18:28.404 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 398 ms overall
17-03-18 04:18:28.454 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:28.464 -07 000000444 INF: FPGA: Recv YRDPOS 129483
17-03-18 04:18:28.464 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 04:18:28.464 -07 000000438 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:28.464 -07 000000438 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 04:18:28.464 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.837 mm, average velocity = 2.103 mm/sec
17-03-18 04:18:29.414 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:29.414 -07 000000480 INF: FPGA: Recv YRDPOS 129483
17-03-18 04:18:29.424 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:29.424 -07 000000438 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:29.454 -07 000000438 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:29.454 -07 000000438 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:18:29.454 -07 000000438 INF: Y Motor: Moved to 63.2241 after 1451 ms (table move)
17-03-18 04:18:29.454 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132483 mm (DAC = 28941)
17-03-18 04:18:29.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.454 -07 000000455 INF: FPGA: Recv ZSGSRD 29914
17-03-18 04:18:29.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:18:29.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.464 -07 000000480 INF: FPGA: Recv ZSGSRD 29911
17-03-18 04:18:29.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.474 -07 000000561 INF: FPGA: Recv ZSGSRD 29916
17-03-18 04:18:29.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.484 -07 000000626 INF: FPGA: Recv ZSGSRD 29911
17-03-18 04:18:29.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.494 -07 000000590 INF: FPGA: Recv ZSGSRD 29915
17-03-18 04:18:29.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.504 -07 000000626 INF: FPGA: Recv ZSGSRD 29915
17-03-18 04:18:29.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.514 -07 000000590 INF: FPGA: Recv ZSGSRD 29909
17-03-18 04:18:29.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.524 -07 000000626 INF: FPGA: Recv ZSGSRD 29907
17-03-18 04:18:29.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.534 -07 000000590 INF: FPGA: Recv ZSGSRD 29909
17-03-18 04:18:29.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.544 -07 000000618 INF: FPGA: Recv ZSGSRD 29919
17-03-18 04:18:29.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.554 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:29.554 -07 000000437 INF: FPGA: Recv ZPIEZORD 25421
17-03-18 04:18:29.564 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.564 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.416 V. Piezo Error = -9.9 V.
17-03-18 04:18:29.564 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.5 um, Read 10 ADC samples: Avg = 29913 (-131.7 uncal um), Error = 0.8 uncal um, Median = 29912 (-131.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29907 (-131.7 uncal um), Max = 29919 (-131.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:18:29.564 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29913, posNoise = 6, negNoise = 6
17-03-18 04:18:29.564 -07 000000610 INF: Z Motor: After move to -0.132483, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:29.564 -07 000000610 INF: Z Motor: Settle wait time = 1453 ms, measure time = 107 ms (allowed 150 ms), total time = 1560 ms
17-03-18 04:18:29.564 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:29.614 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 04:18:29.614 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:29.614 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.132490809807631. ----------
17-03-18 04:18:29.614 -07 000000610 INF: Cycle	123	Tile	5	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:29.614 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28764, sync = True, waitForSettling = True)
17-03-18 04:18:29.614 -07 000000610 INF: Z Motor: Moving to -0.131673 mm, started at -0.132491 mm, distance = 0.82 um
17-03-18 04:18:29.614 -07 000000610 INF: FPGA: Xmit ZDACW 28764\n [Z Motor]
17-03-18 04:18:29.614 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 04:18:29.624 -07 000000610 INF: FPGA: 'ZDACW 28764' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:18:29.624 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:29.624 -07 000000479 INF: FPGA: Recv ZDACR 28764
17-03-18 04:18:29.634 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.634 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:29.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.784 -07 000000625 INF: FPGA: Recv ZSGSRD 29791
17-03-18 04:18:29.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.794 -07 000000012 INF: FPGA: Recv ZSGSRD 29794
17-03-18 04:18:29.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.804 -07 000000437 INF: FPGA: Recv ZSGSRD 29784
17-03-18 04:18:29.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.814 -07 000000444 INF: FPGA: Recv ZSGSRD 29783
17-03-18 04:18:29.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.824 -07 000000579 INF: FPGA: Recv ZSGSRD 29788
17-03-18 04:18:29.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.834 -07 000000611 INF: FPGA: Recv ZSGSRD 29788
17-03-18 04:18:29.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.844 -07 000000438 INF: FPGA: Recv ZSGSRD 29783
17-03-18 04:18:29.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.854 -07 000000618 INF: FPGA: Recv ZSGSRD 29783
17-03-18 04:18:29.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.864 -07 000000447 INF: FPGA: Recv ZSGSRD 29789
17-03-18 04:18:29.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:29.874 -07 000000626 INF: FPGA: Recv ZSGSRD 29792
17-03-18 04:18:29.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.884 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:29.884 -07 000000611 INF: FPGA: Recv ZPIEZORD 25257
17-03-18 04:18:29.894 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:29.894 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.389 V. Piezo Error = -9.9 V.
17-03-18 04:18:29.894 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29788 (-130.9 uncal um), Error = 0.8 uncal um, Median = 29788 (-130.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29783 (-130.9 uncal um), Max = 29794 (-130.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:18:29.894 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29788, posNoise = 6, negNoise = 5
17-03-18 04:18:29.894 -07 000000610 INF: Z Motor: After move to -0.131673, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:29.894 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 04:18:29.894 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:29.894 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:29.894 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:29.894 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:29.894 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:29.894 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:29.894 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:29.894 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:29.894 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 04:18:29.894 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:29.894 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 04:18:29.894 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:29.904 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:18:29.904 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:29.904 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:29.904 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:29.914 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 04:18:29.914 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 04:18:29.914 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 04:18:29.914 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 04:18:29.914 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28941 150\n [Camera]
17-03-18 04:18:30.114 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:30.534 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 612
17-03-18 04:18:30.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 612
17-03-18 04:18:30.534 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:30.534 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:30.534 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 04:18:30.544 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 612
17-03-18 04:18:30.544 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 612
17-03-18 04:18:30.544 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:30.544 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:30.544 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 04:18:30.724 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28941 803
17-03-18 04:18:30.874 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:30.914 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 04:18:30.914 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 04:18:30.914 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:30.924 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 04:18:30.924 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 04:18:30.924 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:30.924 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:30.924 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:30.924 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 04:18:30.934 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 04:18:31.074 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:31.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:31.084 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:31.084 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:31.084 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-18 04:18:31.084 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:31.084 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:31.084 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:31.084 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:31.084 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-18 04:18:31.264 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:18:31.274 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:31.274 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28941 150' command took 2 ms to send, 1350 ms to get response, and 1353 ms overall
17-03-18 04:18:31.274 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.131739
17-03-18 04:18:31.274 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13174 mm
17-03-18 04:18:31.274 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:31.274 -07 000000625 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 04:18:31.274 -07 000000625 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 04:18:31.274 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:31.274 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 28778, sync = True, waitForSettling = False)
17-03-18 04:18:31.274 -07 000000437 INF: Z Motor: Moving to -0.131737 mm, started at -0.131688 mm, distance = -0.05 um
17-03-18 04:18:31.274 -07 000000618 INF: FPGA: Recv YRDPOS 129483
17-03-18 04:18:31.284 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:18:31.284 -07 000000625 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:31.284 -07 000000625 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:31.284 -07 000000625 INF: Y Motor: Moving 1342 steps-17
17-03-18 04:18:31.284 -07 000000437 INF: FPGA: Xmit ZDACW 28778\n [Z Motor]
17-03-18 04:18:31.284 -07 000000585 INF: FPGA: Recv ZDACW
17-03-18 04:18:31.294 -07 000000437 INF: FPGA: 'ZDACW 28778' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 04:18:31.294 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:31.294 -07 000000438 INF: FPGA: Recv ZDACR 28778
17-03-18 04:18:31.304 -07 000000625 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:31.304 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:31.304 -07 000000437 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 04:18:31.464 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 04:18:31.464 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 04:18:31.464 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:31.464 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 04:18:31.464 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 04:18:31.464 -07 000000479 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:31.464 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:31.474 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:31.474 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 04:18:31.474 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 04:18:31.654 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:31.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:31.674 -07 000000479 INF: FPGA: Recv YMVTILE
17-03-18 04:18:31.674 -07 000000625 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 04:18:31.724 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:31.734 -07 000000501 INF: FPGA: Recv YRDPOS 131189
17-03-18 04:18:31.734 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 4 ms to get response, and 5 ms overall
17-03-18 04:18:31.734 -07 000000625 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:31.734 -07 000000625 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-18 04:18:31.734 -07 000000625 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.112 mm/sec
17-03-18 04:18:32.024 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.994908,
17-03-18 04:18:32.684 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:32.684 -07 000000438 INF: FPGA: Recv YRDPOS 131189
17-03-18 04:18:32.694 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:32.694 -07 000000625 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:32.714 -07 000000625 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:32.714 -07 000000625 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:18:32.714 -07 000000625 INF: Y Motor: Moved to 64.0571 after 1440 ms (table move)
17-03-18 04:18:32.714 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131737 mm (DAC = 28778)
17-03-18 04:18:32.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:32.724 -07 000000618 INF: FPGA: Recv ZSGSRD 29799
17-03-18 04:18:32.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 04:18:32.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:32.734 -07 000000447 INF: FPGA: Recv ZSGSRD 29788
17-03-18 04:18:32.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 04:18:32.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:32.764 -07 000000447 INF: FPGA: Recv ZSGSRD 29798
17-03-18 04:18:32.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 04:18:32.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:32.774 -07 000000611 INF: FPGA: Recv ZSGSRD 29802
17-03-18 04:18:32.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:32.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:32.804 -07 000000512 INF: FPGA: Recv ZSGSRD 29789
17-03-18 04:18:32.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 04:18:32.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:32.814 -07 000000447 INF: FPGA: Recv ZSGSRD 29794
17-03-18 04:18:32.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:32.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:32.824 -07 000000608 INF: FPGA: Recv ZSGSRD 29804
17-03-18 04:18:32.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:32.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:32.834 -07 000000474 INF: FPGA: Recv ZSGSRD 29791
17-03-18 04:18:32.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:32.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:32.844 -07 000000501 INF: FPGA: Recv ZSGSRD 29797
17-03-18 04:18:32.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:32.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:32.854 -07 000000444 INF: FPGA: Recv ZSGSRD 29801
17-03-18 04:18:32.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:32.864 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:32.864 -07 000000447 INF: FPGA: Recv ZPIEZORD 25275
17-03-18 04:18:32.874 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:32.874 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.391 V. Piezo Error = -9.9 V.
17-03-18 04:18:32.874 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29796 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29798 (-131.0 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29788 (-130.9 uncal um), Max = 29804 (-131.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 04:18:32.874 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29796, posNoise = 8, negNoise = 8
17-03-18 04:18:32.874 -07 000000610 INF: Z Motor: After move to -0.131737, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:32.874 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 152 ms (allowed 150 ms), total time = 1595 ms
17-03-18 04:18:32.874 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 152 ms, longer than max expected time of 150 ms
17-03-18 04:18:32.874 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1598 ms
17-03-18 04:18:32.874 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:32.874 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.131739176987044. ----------
17-03-18 04:18:32.874 -07 000000610 INF: Cycle	123	Tile	6	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:32.874 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28602, sync = True, waitForSettling = True)
17-03-18 04:18:32.874 -07 000000610 INF: Z Motor: Moving to -0.130932 mm, started at -0.131739 mm, distance = 0.81 um
17-03-18 04:18:32.874 -07 000000610 INF: FPGA: Xmit ZDACW 28602\n [Z Motor]
17-03-18 04:18:32.884 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 04:18:32.884 -07 000000610 INF: FPGA: 'ZDACW 28602' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:32.884 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:32.884 -07 000000585 INF: FPGA: Recv ZDACR 28602
17-03-18 04:18:32.894 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:32.894 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:33.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:33.044 -07 000000618 INF: FPGA: Recv ZSGSRD 29672
17-03-18 04:18:33.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:33.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:33.054 -07 000000626 INF: FPGA: Recv ZSGSRD 29678
17-03-18 04:18:33.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:33.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:33.064 -07 000000444 INF: FPGA: Recv ZSGSRD 29670
17-03-18 04:18:33.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:33.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:33.074 -07 000000561 INF: FPGA: Recv ZSGSRD 29676
17-03-18 04:18:33.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:33.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:33.084 -07 000000438 INF: FPGA: Recv ZSGSRD 29673
17-03-18 04:18:33.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:33.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:33.094 -07 000000625 INF: FPGA: Recv ZSGSRD 29671
17-03-18 04:18:33.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:33.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:33.104 -07 000000590 INF: FPGA: Recv ZSGSRD 29671
17-03-18 04:18:33.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:33.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:33.114 -07 000000012 INF: FPGA: Recv ZSGSRD 29668
17-03-18 04:18:33.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:33.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:33.124 -07 000000590 INF: FPGA: Recv ZSGSRD 29669
17-03-18 04:18:33.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:33.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:33.134 -07 000000625 INF: FPGA: Recv ZSGSRD 29667
17-03-18 04:18:33.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:33.144 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:33.144 -07 000000512 INF: FPGA: Recv ZPIEZORD 25135
17-03-18 04:18:33.154 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:33.154 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.364 V. Piezo Error = -9.9 V.
17-03-18 04:18:33.154 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29672 (-130.2 uncal um), Error = 0.8 uncal um, Median = 29671 (-130.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29667 (-130.1 uncal um), Max = 29678 (-130.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:18:33.154 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29672, posNoise = 6, negNoise = 5
17-03-18 04:18:33.154 -07 000000610 INF: Z Motor: After move to -0.130932, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:33.154 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 04:18:33.154 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:33.154 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:33.154 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:33.154 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:33.154 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:33.154 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:33.154 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:33.154 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:33.154 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:33.154 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:33.154 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 04:18:33.154 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:33.164 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 04:18:33.164 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:33.164 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 04:18:33.164 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:33.174 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 04:18:33.174 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 04:18:33.174 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:18:33.174 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 24 ms.
17-03-18 04:18:33.184 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28778 150\n [Camera]
17-03-18 04:18:33.384 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:33.794 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:33.794 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:33.794 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:33.794 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:33.804 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start.
17-03-18 04:18:33.804 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:33.804 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:33.804 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:33.804 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:33.804 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-18 04:18:33.994 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28778 803
17-03-18 04:18:34.144 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:34.184 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 04:18:34.184 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 04:18:34.184 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:34.184 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 04:18:34.184 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 04:18:34.184 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:34.194 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:34.194 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:34.194 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 04:18:34.194 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 04:18:34.344 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:34.344 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:34.344 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:34.344 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:34.344 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start.
17-03-18 04:18:34.344 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:34.344 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:34.344 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:34.344 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:34.344 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start.
17-03-18 04:18:34.534 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP 1350
17-03-18 04:18:34.534 -07 000000611 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:34.534 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28778 150' command took 2 ms to send, 1348 ms to get response, and 1357 ms overall
17-03-18 04:18:34.534 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.131475
17-03-18 04:18:34.544 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13147 mm
17-03-18 04:18:34.544 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:34.544 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 04:18:34.544 -07 000000438 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 04:18:34.544 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:34.544 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 28721, sync = True, waitForSettling = False)
17-03-18 04:18:34.544 -07 000000618 INF: Z Motor: Moving to -0.131476 mm, started at -0.130943 mm, distance = -0.53 um
17-03-18 04:18:34.544 -07 000000444 INF: FPGA: Recv YRDPOS 131189
17-03-18 04:18:34.554 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:18:34.554 -07 000000438 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:34.554 -07 000000438 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:34.554 -07 000000438 INF: Y Motor: Moving 1337 steps-11
17-03-18 04:18:34.554 -07 000000618 INF: FPGA: Xmit ZDACW 28721\n [Z Motor]
17-03-18 04:18:34.554 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 04:18:34.564 -07 000000618 INF: FPGA: 'ZDACW 28721' command took 1 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 04:18:34.564 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:34.564 -07 000000585 INF: FPGA: Recv ZDACR 28721
17-03-18 04:18:34.574 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:34.574 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:34.574 -07 000000618 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 04:18:34.724 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 04:18:34.724 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 04:18:34.724 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 04:18:34.724 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:34.724 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 04:18:34.724 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:34.734 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:34.734 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 04:18:34.734 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:34.744 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 04:18:34.944 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 04:18:34.944 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 04:18:34.994 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:34.994 -07 000000501 INF: FPGA: Recv YRDPOS 132872
17-03-18 04:18:35.004 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:35.004 -07 000000438 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:35.004 -07 000000438 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 04:18:35.004 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.835 mm, average velocity = 2.099 mm/sec
17-03-18 04:18:35.954 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:35.954 -07 000000512 INF: FPGA: Recv YRDPOS 132872
17-03-18 04:18:35.964 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:35.964 -07 000000438 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:35.994 -07 000000438 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:35.994 -07 000000438 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:18:35.994 -07 000000438 INF: Y Motor: Moved to 64.8789 after 1447 ms (table move)
17-03-18 04:18:35.994 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131476 mm (DAC = 28721)
17-03-18 04:18:35.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:35.994 -07 000000437 INF: FPGA: Recv ZSGSRD 29757
17-03-18 04:18:36.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:36.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.004 -07 000000611 INF: FPGA: Recv ZSGSRD 29755
17-03-18 04:18:36.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.014 -07 000000447 INF: FPGA: Recv ZSGSRD 29758
17-03-18 04:18:36.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.024 -07 000000012 INF: FPGA: Recv ZSGSRD 29761
17-03-18 04:18:36.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.034 -07 000000447 INF: FPGA: Recv ZSGSRD 29751
17-03-18 04:18:36.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.044 -07 000000625 INF: FPGA: Recv ZSGSRD 29756
17-03-18 04:18:36.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.054 -07 000000611 INF: FPGA: Recv ZSGSRD 29753
17-03-18 04:18:36.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.064 -07 000000012 INF: FPGA: Recv ZSGSRD 29753
17-03-18 04:18:36.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.074 -07 000000487 INF: FPGA: Recv ZSGSRD 29754
17-03-18 04:18:36.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:36.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.084 -07 000000447 INF: FPGA: Recv ZSGSRD 29747
17-03-18 04:18:36.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.094 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:36.094 -07 000000626 INF: FPGA: Recv ZPIEZORD 25286
17-03-18 04:18:36.104 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.104 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.383 V. Piezo Error = -9.8 V.
17-03-18 04:18:36.104 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.5 um, Read 10 ADC samples: Avg = 29754 (-130.7 uncal um), Error = 0.8 uncal um, Median = 29754 (-130.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29747 (-130.6 uncal um), Max = 29761 (-130.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:18:36.104 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29754, posNoise = 7, negNoise = 7
17-03-18 04:18:36.104 -07 000000610 INF: Z Motor: After move to -0.131476, error = 0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:36.104 -07 000000610 INF: Z Motor: Settle wait time = 1451 ms, measure time = 105 ms (allowed 150 ms), total time = 1556 ms
17-03-18 04:18:36.104 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:36.154 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1609 ms
17-03-18 04:18:36.154 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:36.154 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.131469360077091. ----------
17-03-18 04:18:36.154 -07 000000610 INF: Cycle	123	Tile	7	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:36.154 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28544, sync = True, waitForSettling = True)
17-03-18 04:18:36.154 -07 000000610 INF: Z Motor: Moving to -0.130666 mm, started at -0.131469 mm, distance = 0.80 um
17-03-18 04:18:36.154 -07 000000610 INF: FPGA: Xmit ZDACW 28544\n [Z Motor]
17-03-18 04:18:36.154 -07 000000608 INF: FPGA: Recv ZDACW
17-03-18 04:18:36.164 -07 000000610 INF: FPGA: 'ZDACW 28544' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:36.164 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:36.164 -07 000000625 INF: FPGA: Recv ZDACR 28544
17-03-18 04:18:36.174 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.174 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:36.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.324 -07 000000437 INF: FPGA: Recv ZSGSRD 29634
17-03-18 04:18:36.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.334 -07 000000474 INF: FPGA: Recv ZSGSRD 29630
17-03-18 04:18:36.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.344 -07 000000444 INF: FPGA: Recv ZSGSRD 29633
17-03-18 04:18:36.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.354 -07 000000579 INF: FPGA: Recv ZSGSRD 29629
17-03-18 04:18:36.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.364 -07 000000512 INF: FPGA: Recv ZSGSRD 29628
17-03-18 04:18:36.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.374 -07 000000447 INF: FPGA: Recv ZSGSRD 29627
17-03-18 04:18:36.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.384 -07 000000480 INF: FPGA: Recv ZSGSRD 29627
17-03-18 04:18:36.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.394 -07 000000579 INF: FPGA: Recv ZSGSRD 29628
17-03-18 04:18:36.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.404 -07 000000444 INF: FPGA: Recv ZSGSRD 29626
17-03-18 04:18:36.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:36.414 -07 000000512 INF: FPGA: Recv ZSGSRD 29629
17-03-18 04:18:36.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.424 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:36.424 -07 000000501 INF: FPGA: Recv ZPIEZORD 25070
17-03-18 04:18:36.434 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:36.434 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.356 V. Piezo Error = -10.0 V.
17-03-18 04:18:36.434 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29629 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29628 (-129.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29626 (-129.9 uncal um), Max = 29634 (-129.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 04:18:36.434 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29629, posNoise = 5, negNoise = 3
17-03-18 04:18:36.434 -07 000000610 INF: Z Motor: After move to -0.130666, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:36.434 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 04:18:36.434 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:36.434 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:36.434 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:36.434 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:36.434 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:36.434 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:36.434 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:36.434 -07 000000479 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:36.434 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:36.434 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:36.434 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:36.434 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:36.434 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:36.434 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:36.444 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:18:36.444 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:36.454 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:18:36.454 -07 000000585 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:18:36.454 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms.
17-03-18 04:18:36.454 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 04:18:36.454 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28721 150\n [Camera]
17-03-18 04:18:36.654 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:36.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:36.654 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:37.074 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:37.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:37.074 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:37.074 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:37.074 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-18 04:18:37.084 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:37.084 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:37.084 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:37.084 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:37.084 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-18 04:18:37.274 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28721 803
17-03-18 04:18:37.384 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.96762,
17-03-18 04:18:37.424 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 956
17-03-18 04:18:37.454 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 04:18:37.454 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 04:18:37.454 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:37.454 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 04:18:37.454 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 04:18:37.454 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:37.464 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:37.464 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 04:18:37.464 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:37.464 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 04:18:37.624 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1156
17-03-18 04:18:37.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1156
17-03-18 04:18:37.624 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:37.624 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1156
17-03-18 04:18:37.624 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:37.624 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1156
17-03-18 04:18:37.624 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) start.
17-03-18 04:18:37.624 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:37.624 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:37.624 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-18 04:18:37.814 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:18:37.814 -07 000000474 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:37.814 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28721 150' command took 2 ms to send, 1343 ms to get response, and 1353 ms overall
17-03-18 04:18:37.814 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 04:18:37.814 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87890625, Z-Position -0.13066633355937. ------
17-03-18 04:18:37.814 -07 000000608 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:18:37.814 -07 000000444 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13731 mm
17-03-18 04:18:37.814 -07 000000444 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:37.824 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 04:18:37.824 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 29995, sync = True, waitForSettling = False)
17-03-18 04:18:37.824 -07 000000455 INF: Z Motor: Moving to -0.137308 mm, started at -0.130666 mm, distance = -6.64 um
17-03-18 04:18:37.824 -07 000000455 INF: FPGA: Xmit ZDACW 29995\n [Z Motor]
17-03-18 04:18:37.824 -07 000000611 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:18:37.824 -07 000000608 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 04:18:37.824 -07 000000480 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-18 04:18:37.824 -07 000000012 INF: FPGA: Recv ZDACW
17-03-18 04:18:37.834 -07 000000455 INF: FPGA: 'ZDACW 29995' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 04:18:37.834 -07 000000608 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:18:37.844 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:37.844 -07 000000501 INF: FPGA: Recv YRDPOS 132872
17-03-18 04:18:38.004 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:38.004 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 180 ms overall
17-03-18 04:18:38.004 -07 000000480 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:38.004 -07 000000480 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:38.004 -07 000000480 INF: Y Motor: Moving 1350 steps-28
17-03-18 04:18:38.004 -07 000000501 INF: FPGA: Recv ZDACR 29995
17-03-18 04:18:38.014 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 179 ms overall
17-03-18 04:18:38.014 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:38.014 -07 000000455 INF: Z Motor: MoveAbsStepped took 189 ms (did NOT wait for settling yet))
17-03-18 04:18:38.034 -07 000000487 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:18:38.034 -07 000000608 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 196 ms to get response, and 213 ms overall
17-03-18 04:18:38.044 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 412 ms.
17-03-18 04:18:38.044 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-18 04:18:38.044 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:38.044 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:38.044 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) end. Duration was 419 ms.
17-03-18 04:18:38.044 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 419 ms.
17-03-18 04:18:38.044 -07 000000479 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:38.054 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:38.054 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 425 ms.
17-03-18 04:18:38.054 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 427 ms.
17-03-18 04:18:38.384 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 04:18:38.384 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-18 04:18:38.434 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:38.444 -07 000000579 INF: FPGA: Recv YRDPOS 134582
17-03-18 04:18:38.444 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 04:18:38.444 -07 000000480 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:38.444 -07 000000480 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 04:18:38.444 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.844 mm, average velocity = 2.191 mm/sec
17-03-18 04:18:39.394 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:39.394 -07 000000479 INF: FPGA: Recv YRDPOS 134583
17-03-18 04:18:39.404 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:39.404 -07 000000480 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:39.434 -07 000000480 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:39.434 -07 000000480 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 04:18:39.434 -07 000000480 INF: Y Motor: Moved to 65.7144 after 1611 ms (table move)
17-03-18 04:18:39.434 -07 000000444 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137308 mm (DAC = 29995)
17-03-18 04:18:39.434 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:39.434 -07 000000512 INF: FPGA: Recv ZSGSRD 30666
17-03-18 04:18:39.444 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:18:39.444 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:39.444 -07 000000012 INF: FPGA: Recv ZSGSRD 30676
17-03-18 04:18:39.454 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:39.454 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:39.454 -07 000000437 INF: FPGA: Recv ZSGSRD 30666
17-03-18 04:18:39.464 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:39.464 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:39.464 -07 000000561 INF: FPGA: Recv ZSGSRD 30665
17-03-18 04:18:39.474 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:39.474 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:39.474 -07 000000438 INF: FPGA: Recv ZSGSRD 30661
17-03-18 04:18:39.484 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:39.484 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:39.484 -07 000000512 INF: FPGA: Recv ZSGSRD 30661
17-03-18 04:18:39.494 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:39.494 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:39.494 -07 000000611 INF: FPGA: Recv ZSGSRD 30663
17-03-18 04:18:39.504 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:39.504 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:39.504 -07 000000474 INF: FPGA: Recv ZSGSRD 30656
17-03-18 04:18:39.514 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:39.514 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:39.514 -07 000000618 INF: FPGA: Recv ZSGSRD 30663
17-03-18 04:18:39.524 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:39.524 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:39.524 -07 000000590 INF: FPGA: Recv ZSGSRD 30671
17-03-18 04:18:39.534 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:39.534 -07 000000444 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:39.534 -07 000000501 INF: FPGA: Recv ZPIEZORD 26416
17-03-18 04:18:39.544 -07 000000444 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:39.544 -07 000000444 INF: Z Motor: Piezo is near 36.4 V (nominally 0 to 100 V), expect near 45.8 V, since DAC is at 4.577 V. Piezo Error = -9.3 V.
17-03-18 04:18:39.544 -07 000000444 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.3 um, Read 10 ADC samples: Avg = 30665 (-136.5 uncal um), Error = 0.8 uncal um, Median = 30664 (-136.5 uncal um), StdDev = 6 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 30656 (-136.5 uncal um), Max = 30676 (-136.6 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 04:18:39.544 -07 000000444 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30665, posNoise = 11, negNoise = 9
17-03-18 04:18:39.544 -07 000000444 INF: Z Motor: After move to -0.137308, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:39.544 -07 000000444 INF: Z Motor: Settle wait time = 1615 ms, measure time = 104 ms (allowed 150 ms), total time = 1719 ms
17-03-18 04:18:39.544 -07 000000444 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:39.594 -07 000000444 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1771 ms
17-03-18 04:18:39.594 -07 000000444 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:39.594 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:39.594 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:39.594 -07 000000474 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:39.594 -07 000000479 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:39.594 -07 000000447 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:18:39.594 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:39.604 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:39.604 -07 000000447 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:18:39.604 -07 000000447 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:18:39.604 -07 000000447 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:18:39.614 -07 000000447 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 04:18:39.614 -07 000000447 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 04:18:39.614 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:18:39.664 -07 000000474 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:18:39.964 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:18:39.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:18:39.964 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:18:39.964 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-18 04:18:40.004 -07 000000012 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:18:40.004 -07 000000512 INF: FPGA: Recv CAMSNAP
17-03-18 04:18:40.004 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 383 ms to get response, and 386 ms overall
17-03-18 04:18:40.084 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 120 ms.
17-03-18 04:18:40.084 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:40.084 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:18:40.084 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 123 ms.
17-03-18 04:18:40.104 -07 000000625 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:18:40.104 -07 000000590 INF: Autofocus start
17-03-18 04:18:40.104 -07 000000590 INF: MeasureProfile start
17-03-18 04:18:40.104 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:18:40.114 -07 000000625 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:18:40.114 -07 000000625 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:18:40.114 -07 000000590 INF: MeasureProfile done
17-03-18 04:18:40.114 -07 000000590 INF: X=80  Z correction [um]=0.3608828
17-03-18 04:18:40.114 -07 000000590 INF: Autofocus finished
17-03-18 04:18:40.314 -07 000000474 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:18:40.314 -07 000000625 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 04:18:40.314 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.137321817338235. ----------
17-03-18 04:18:40.314 -07 000000610 INF: Cycle	123	Tile	8	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:40.324 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28586, sync = True, waitForSettling = True)
17-03-18 04:18:40.324 -07 000000610 INF: Z Motor: Moving to -0.130858 mm, started at -0.137322 mm, distance = 6.46 um
17-03-18 04:18:40.324 -07 000000610 INF: FPGA: Xmit ZDACW 28586\n [Z Motor]
17-03-18 04:18:40.324 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 04:18:40.334 -07 000000610 INF: FPGA: 'ZDACW 28586' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:18:40.334 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:40.334 -07 000000012 INF: FPGA: Recv ZDACR 28586
17-03-18 04:18:40.344 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:40.344 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:40.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:40.494 -07 000000611 INF: FPGA: Recv ZSGSRD 29661
17-03-18 04:18:40.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:40.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:40.504 -07 000000012 INF: FPGA: Recv ZSGSRD 29663
17-03-18 04:18:40.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:40.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:40.514 -07 000000611 INF: FPGA: Recv ZSGSRD 29656
17-03-18 04:18:40.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:40.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:40.524 -07 000000626 INF: FPGA: Recv ZSGSRD 29658
17-03-18 04:18:40.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:40.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:40.534 -07 000000618 INF: FPGA: Recv ZSGSRD 29654
17-03-18 04:18:40.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:40.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:40.544 -07 000000474 INF: FPGA: Recv ZSGSRD 29654
17-03-18 04:18:40.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:40.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:40.554 -07 000000447 INF: FPGA: Recv ZSGSRD 29662
17-03-18 04:18:40.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:40.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:40.564 -07 000000579 INF: FPGA: Recv ZSGSRD 29662
17-03-18 04:18:40.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:40.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:40.574 -07 000000480 INF: FPGA: Recv ZSGSRD 29658
17-03-18 04:18:40.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:40.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:40.584 -07 000000585 INF: FPGA: Recv ZSGSRD 29663
17-03-18 04:18:40.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:40.594 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:40.594 -07 000000437 INF: FPGA: Recv ZPIEZORD 25127
17-03-18 04:18:40.604 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:40.604 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.362 V. Piezo Error = -9.9 V.
17-03-18 04:18:40.604 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29659 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29660 (-130.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29654 (-130.0 uncal um), Max = 29663 (-130.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:18:40.604 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29659, posNoise = 4, negNoise = 5
17-03-18 04:18:40.604 -07 000000610 INF: Z Motor: After move to -0.130858, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:40.604 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 04:18:40.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:40.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:40.604 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:40.604 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:40.604 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:40.604 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:40.604 -07 000000479 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:40.604 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:40.604 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 04:18:40.604 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:40.604 -07 000000479 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 04:18:40.604 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:40.614 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:40.614 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:40.614 -07 000000479 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:18:40.614 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:40.624 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 04:18:40.624 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 04:18:40.624 -07 000000479 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-18 04:18:40.624 -07 000000479 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 04:18:40.624 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28763 150\n [Camera]
17-03-18 04:18:40.824 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:41.244 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:41.244 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:41.244 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:41.244 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:41.244 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:41.244 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:41.254 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:41.254 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) start.
17-03-18 04:18:41.264 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:41.264 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 04:18:41.434 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28763 804
17-03-18 04:18:41.584 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:41.634 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 04:18:41.634 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 04:18:41.634 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:41.634 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:41.634 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 04:18:41.634 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 04:18:41.634 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:41.644 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:41.644 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 04:18:41.644 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 04:18:41.654 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:41.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:41.784 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:41.784 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:41.784 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:41.794 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:41.794 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:41.794 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:41.924 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:41.924 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-18 04:18:41.924 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:41.924 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-18 04:18:41.974 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:18:41.984 -07 000000480 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:41.984 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28763 150' command took 2 ms to send, 1350 ms to get response, and 1353 ms overall
17-03-18 04:18:41.984 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.131276
17-03-18 04:18:41.984 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13128 mm
17-03-18 04:18:41.984 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:41.984 -07 000000447 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 04:18:41.984 -07 000000625 INF: Z Motor: Entering MoveAbsStepped (DAC = 28677, sync = True, waitForSettling = False)
17-03-18 04:18:41.984 -07 000000625 INF: Z Motor: Moving to -0.131275 mm, started at -0.130859 mm, distance = -0.42 um
17-03-18 04:18:41.984 -07 000000625 INF: FPGA: Xmit ZDACW 28677\n [Z Motor]
17-03-18 04:18:41.984 -07 000000447 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-18 04:18:41.984 -07 000000012 INF: FPGA: Recv ZDACW
17-03-18 04:18:41.994 -07 000000625 INF: FPGA: 'ZDACW 28677' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:41.994 -07 000000625 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:41.994 -07 000000608 INF: FPGA: Recv ZDACR 28677
17-03-18 04:18:42.004 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:42.004 -07 000000625 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:42.004 -07 000000625 INF: Z Motor: MoveAbsStepped took 14 ms (did NOT wait for settling yet))
17-03-18 04:18:42.004 -07 000000618 INF: FPGA: Recv YRDPOS 134583
17-03-18 04:18:42.014 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 04:18:42.014 -07 000000447 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:42.014 -07 000000447 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:42.014 -07 000000447 INF: Y Motor: Moving 1341 steps-18
17-03-18 04:18:42.014 -07 000000447 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:42.324 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 397 ms.
17-03-18 04:18:42.324 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 04:18:42.324 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:42.324 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 04:18:42.324 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 04:18:42.324 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:42.324 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:42.334 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:42.334 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 541 ms.
17-03-18 04:18:42.334 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 543 ms.
17-03-18 04:18:42.384 -07 000000012 INF: FPGA: Recv YMVTILE
17-03-18 04:18:42.384 -07 000000447 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 04:18:42.434 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:42.444 -07 000000501 INF: FPGA: Recv YRDPOS 136272
17-03-18 04:18:42.444 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:18:42.444 -07 000000447 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:42.444 -07 000000447 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 04:18:42.444 -07 000000447 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.218 mm/sec
17-03-18 04:18:42.744 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.993549,
17-03-18 04:18:43.394 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:43.394 -07 000000455 INF: FPGA: Recv YRDPOS 136273
17-03-18 04:18:43.404 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:43.404 -07 000000447 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:43.434 -07 000000447 INF: Y Motor: After move to 66.552605, error = -0.013054, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:43.434 -07 000000447 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 04:18:43.434 -07 000000447 INF: Y Motor: Moved to 66.5396 after 1446 ms (table move)
17-03-18 04:18:43.434 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131275 mm (DAC = 28677)
17-03-18 04:18:43.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.434 -07 000000590 INF: FPGA: Recv ZSGSRD 29726
17-03-18 04:18:43.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:18:43.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.444 -07 000000447 INF: FPGA: Recv ZSGSRD 29727
17-03-18 04:18:43.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.454 -07 000000590 INF: FPGA: Recv ZSGSRD 29732
17-03-18 04:18:43.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.464 -07 000000625 INF: FPGA: Recv ZSGSRD 29726
17-03-18 04:18:43.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.484 -07 000000590 INF: FPGA: Recv ZSGSRD 29721
17-03-18 04:18:43.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:43.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.494 -07 000000618 INF: FPGA: Recv ZSGSRD 29721
17-03-18 04:18:43.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:43.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.524 -07 000000487 INF: FPGA: Recv ZSGSRD 29729
17-03-18 04:18:43.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 04:18:43.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.544 -07 000000561 INF: FPGA: Recv ZSGSRD 29725
17-03-18 04:18:43.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:43.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.554 -07 000000625 INF: FPGA: Recv ZSGSRD 29726
17-03-18 04:18:43.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.574 -07 000000579 INF: FPGA: Recv ZSGSRD 29722
17-03-18 04:18:43.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:43.584 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:43.584 -07 000000501 INF: FPGA: Recv ZPIEZORD 25202
17-03-18 04:18:43.594 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.594 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.376 V. Piezo Error = -9.9 V.
17-03-18 04:18:43.594 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29726 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29726 (-130.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29721 (-130.5 uncal um), Max = 29732 (-130.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:18:43.594 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29726, posNoise = 6, negNoise = 5
17-03-18 04:18:43.594 -07 000000610 INF: Z Motor: After move to -0.131275, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:43.594 -07 000000610 INF: Z Motor: Settle wait time = 1449 ms, measure time = 155 ms (allowed 150 ms), total time = 1604 ms
17-03-18 04:18:43.594 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 155 ms, longer than max expected time of 150 ms
17-03-18 04:18:43.594 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms
17-03-18 04:18:43.594 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:43.594 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53955078125, Z-position -0.131289482137121. ----------
17-03-18 04:18:43.594 -07 000000610 INF: Cycle	123	Tile	9	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:43.594 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28500, sync = True, waitForSettling = True)
17-03-18 04:18:43.594 -07 000000610 INF: Z Motor: Moving to -0.130465 mm, started at -0.131289 mm, distance = 0.82 um
17-03-18 04:18:43.594 -07 000000610 INF: FPGA: Xmit ZDACW 28500\n [Z Motor]
17-03-18 04:18:43.594 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 04:18:43.604 -07 000000610 INF: FPGA: 'ZDACW 28500' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 04:18:43.604 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:43.604 -07 000000012 INF: FPGA: Recv ZDACR 28500
17-03-18 04:18:43.614 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.614 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:43.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.764 -07 000000487 INF: FPGA: Recv ZSGSRD 29604
17-03-18 04:18:43.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:43.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.774 -07 000000438 INF: FPGA: Recv ZSGSRD 29604
17-03-18 04:18:43.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.784 -07 000000480 INF: FPGA: Recv ZSGSRD 29599
17-03-18 04:18:43.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.794 -07 000000626 INF: FPGA: Recv ZSGSRD 29597
17-03-18 04:18:43.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.804 -07 000000447 INF: FPGA: Recv ZSGSRD 29593
17-03-18 04:18:43.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.814 -07 000000585 INF: FPGA: Recv ZSGSRD 29597
17-03-18 04:18:43.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.824 -07 000000611 INF: FPGA: Recv ZSGSRD 29595
17-03-18 04:18:43.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.834 -07 000000487 INF: FPGA: Recv ZSGSRD 29600
17-03-18 04:18:43.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.844 -07 000000437 INF: FPGA: Recv ZSGSRD 29604
17-03-18 04:18:43.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:43.854 -07 000000447 INF: FPGA: Recv ZSGSRD 29598
17-03-18 04:18:43.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.864 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:43.864 -07 000000590 INF: FPGA: Recv ZPIEZORD 25063
17-03-18 04:18:43.874 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:43.874 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.349 V. Piezo Error = -9.9 V.
17-03-18 04:18:43.874 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29599 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29598 (-129.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29593 (-129.7 uncal um), Max = 29604 (-129.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:18:43.874 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29599, posNoise = 5, negNoise = 6
17-03-18 04:18:43.874 -07 000000610 INF: Z Motor: After move to -0.130465, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:43.874 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 04:18:43.874 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:43.874 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:43.874 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:43.874 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:43.874 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:43.874 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:43.874 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:43.874 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:43.874 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:43.874 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:43.874 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:43.874 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:43.884 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:43.884 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:43.884 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:18:43.884 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:43.894 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:18:43.894 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:18:43.894 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 04:18:43.894 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:18:43.904 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28677 150\n [Camera]
17-03-18 04:18:44.094 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:44.514 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:44.514 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:44.514 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:44.514 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:44.524 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 04:18:44.524 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:44.524 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:44.524 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:44.524 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:44.524 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) start.
17-03-18 04:18:44.714 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28677 803
17-03-18 04:18:44.864 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:44.894 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 04:18:44.894 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 04:18:44.894 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:44.894 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 04:18:44.894 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 04:18:44.894 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:44.904 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:44.904 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 04:18:44.904 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:44.904 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 04:18:45.064 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:45.064 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:45.064 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:45.064 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:45.064 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) start.
17-03-18 04:18:45.064 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:45.064 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:45.064 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:45.064 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:45.064 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) start.
17-03-18 04:18:45.254 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:18:45.254 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:45.254 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28677 150' command took 2 ms to send, 1344 ms to get response, and 1353 ms overall
17-03-18 04:18:45.254 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131284
17-03-18 04:18:45.254 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13128 mm
17-03-18 04:18:45.254 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:45.254 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 28679, sync = True, waitForSettling = False)
17-03-18 04:18:45.264 -07 000000611 INF: Z Motor: Moving to -0.131284 mm, started at -0.130474 mm, distance = -0.81 um
17-03-18 04:18:45.264 -07 000000611 INF: FPGA: Xmit ZDACW 28679\n [Z Motor]
17-03-18 04:18:45.264 -07 000000447 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 04:18:45.264 -07 000000447 INF: Y Motor: Moving to 67.3826 mm, started at 66.5396 mm, delta = 0.8431 mm
17-03-18 04:18:45.264 -07 000000625 INF: FPGA: Recv ZDACW
17-03-18 04:18:45.274 -07 000000611 INF: FPGA: 'ZDACW 28679' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:45.274 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:45.274 -07 000000561 INF: FPGA: Recv YRDPOS 136273
17-03-18 04:18:45.284 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:45.284 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:45.284 -07 000000447 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:45.284 -07 000000447 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:45.284 -07 000000447 INF: Y Motor: Moving 1349 steps-28
17-03-18 04:18:45.284 -07 000000618 INF: FPGA: Recv ZDACR 28679
17-03-18 04:18:45.294 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:45.294 -07 000000447 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:45.294 -07 000000611 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 04:18:45.444 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 04:18:45.444 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 04:18:45.444 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 04:18:45.444 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 04:18:45.444 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:45.444 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:45.454 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:45.454 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:45.454 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 04:18:45.464 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 04:18:45.664 -07 000000012 INF: FPGA: Recv YMVTILE
17-03-18 04:18:45.664 -07 000000447 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 04:18:45.724 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:45.724 -07 000000501 INF: FPGA: Recv YRDPOS 137978
17-03-18 04:18:45.734 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:45.734 -07 000000447 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:45.734 -07 000000447 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-18 04:18:45.734 -07 000000447 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.843 mm, average velocity = 2.184 mm/sec
17-03-18 04:18:46.654 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:46.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:46.684 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:46.684 -07 000000590 INF: FPGA: Recv YRDPOS 137978
17-03-18 04:18:46.694 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:46.694 -07 000000447 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:46.714 -07 000000447 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:46.724 -07 000000447 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:18:46.724 -07 000000447 INF: Y Motor: Moved to 67.3721 after 1459 ms (table move)
17-03-18 04:18:46.724 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131284 mm (DAC = 28679)
17-03-18 04:18:46.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:46.724 -07 000000480 INF: FPGA: Recv ZSGSRD 29725
17-03-18 04:18:46.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:18:46.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:46.734 -07 000000618 INF: FPGA: Recv ZSGSRD 29730
17-03-18 04:18:46.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:46.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:46.744 -07 000000611 INF: FPGA: Recv ZSGSRD 29728
17-03-18 04:18:46.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:46.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:46.754 -07 000000590 INF: FPGA: Recv ZSGSRD 29730
17-03-18 04:18:46.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:46.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:46.764 -07 000000444 INF: FPGA: Recv ZSGSRD 29722
17-03-18 04:18:46.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:46.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:46.774 -07 000000479 INF: FPGA: Recv ZSGSRD 29727
17-03-18 04:18:46.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:46.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:46.784 -07 000000626 INF: FPGA: Recv ZSGSRD 29721
17-03-18 04:18:46.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:46.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:46.794 -07 000000501 INF: FPGA: Recv ZSGSRD 29724
17-03-18 04:18:46.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:46.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:46.804 -07 000000579 INF: FPGA: Recv ZSGSRD 29731
17-03-18 04:18:46.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:46.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:46.814 -07 000000447 INF: FPGA: Recv ZSGSRD 29723
17-03-18 04:18:46.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:46.824 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:46.824 -07 000000474 INF: FPGA: Recv ZPIEZORD 25233
17-03-18 04:18:46.834 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:46.834 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.376 V. Piezo Error = -9.9 V.
17-03-18 04:18:46.834 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29726 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29726 (-130.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29721 (-130.5 uncal um), Max = 29731 (-130.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:18:46.834 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29726, posNoise = 5, negNoise = 5
17-03-18 04:18:46.834 -07 000000610 INF: Z Motor: After move to -0.131284, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:46.834 -07 000000610 INF: Z Motor: Settle wait time = 1462 ms, measure time = 108 ms (allowed 150 ms), total time = 1570 ms
17-03-18 04:18:46.834 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:46.884 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1623 ms
17-03-18 04:18:46.884 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:46.884 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.131289482137121. ----------
17-03-18 04:18:46.884 -07 000000610 INF: Cycle	123	Tile	10	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:46.884 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28502, sync = True, waitForSettling = True)
17-03-18 04:18:46.884 -07 000000610 INF: Z Motor: Moving to -0.130474 mm, started at -0.131289 mm, distance = 0.82 um
17-03-18 04:18:46.884 -07 000000610 INF: FPGA: Xmit ZDACW 28502\n [Z Motor]
17-03-18 04:18:46.884 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 04:18:46.894 -07 000000610 INF: FPGA: 'ZDACW 28502' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:18:46.894 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:46.894 -07 000000608 INF: FPGA: Recv ZDACR 28502
17-03-18 04:18:46.904 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:46.904 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:47.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:47.054 -07 000000487 INF: FPGA: Recv ZSGSRD 29600
17-03-18 04:18:47.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:47.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:47.064 -07 000000444 INF: FPGA: Recv ZSGSRD 29608
17-03-18 04:18:47.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:47.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:47.074 -07 000000480 INF: FPGA: Recv ZSGSRD 29603
17-03-18 04:18:47.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:47.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:47.084 -07 000000444 INF: FPGA: Recv ZSGSRD 29604
17-03-18 04:18:47.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:47.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:47.094 -07 000000487 INF: FPGA: Recv ZSGSRD 29599
17-03-18 04:18:47.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:47.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:47.104 -07 000000012 INF: FPGA: Recv ZSGSRD 29595
17-03-18 04:18:47.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:47.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:47.114 -07 000000437 INF: FPGA: Recv ZSGSRD 29601
17-03-18 04:18:47.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:47.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:47.124 -07 000000455 INF: FPGA: Recv ZSGSRD 29604
17-03-18 04:18:47.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:47.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:47.134 -07 000000480 INF: FPGA: Recv ZSGSRD 29603
17-03-18 04:18:47.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:47.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:47.144 -07 000000585 INF: FPGA: Recv ZSGSRD 29599
17-03-18 04:18:47.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:47.154 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:47.154 -07 000000625 INF: FPGA: Recv ZPIEZORD 25069
17-03-18 04:18:47.164 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:47.164 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.349 V. Piezo Error = -9.9 V.
17-03-18 04:18:47.164 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29602 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29602 (-129.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29595 (-129.7 uncal um), Max = 29608 (-129.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:18:47.164 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29602, posNoise = 6, negNoise = 7
17-03-18 04:18:47.164 -07 000000610 INF: Z Motor: After move to -0.130474, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:47.164 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 04:18:47.164 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:47.164 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:47.164 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:47.164 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:47.164 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:47.164 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:47.164 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:47.164 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:47.164 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:47.164 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:47.164 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:47.164 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:47.174 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:47.174 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:47.174 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:18:47.174 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:47.184 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 04:18:47.184 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:18:47.184 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 04:18:47.184 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 04:18:47.194 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28679 150\n [Camera]
17-03-18 04:18:47.394 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:47.804 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:47.804 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:47.804 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:47.814 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:47.814 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) start.
17-03-18 04:18:47.814 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:47.814 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:47.814 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:47.814 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:47.814 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 04:18:48.004 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28679 803
17-03-18 04:18:48.104 -07 000000474 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.99219,
17-03-18 04:18:48.154 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:48.214 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 04:18:48.214 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 04:18:48.214 -07 000000625 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:48.214 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:48.214 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 410 ms.
17-03-18 04:18:48.214 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 407 ms.
17-03-18 04:18:48.224 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-18 04:18:48.224 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:48.224 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 04:18:48.244 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 428 ms.
17-03-18 04:18:48.354 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:48.354 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:48.354 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:48.354 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:48.354 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) start.
17-03-18 04:18:48.354 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:48.354 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:48.354 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:48.354 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:48.354 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 04:18:48.544 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:18:48.544 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:48.544 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28679 150' command took 2 ms to send, 1344 ms to get response, and 1353 ms overall
17-03-18 04:18:48.544 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.130891
17-03-18 04:18:48.544 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13089 mm
17-03-18 04:18:48.544 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:48.544 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 04:18:48.544 -07 000000561 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-18 04:18:48.554 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:48.554 -07 000000012 INF: Z Motor: Entering MoveAbsStepped (DAC = 28593, sync = True, waitForSettling = False)
17-03-18 04:18:48.554 -07 000000012 INF: Z Motor: Moving to -0.130890 mm, started at -0.130493 mm, distance = -0.40 um
17-03-18 04:18:48.554 -07 000000611 INF: FPGA: Recv YRDPOS 137978
17-03-18 04:18:48.564 -07 000000012 INF: FPGA: Xmit ZDACW 28593\n [Z Motor]
17-03-18 04:18:48.564 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:48.564 -07 000000561 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:48.564 -07 000000561 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:48.564 -07 000000561 INF: Y Motor: Moving 1345 steps-22
17-03-18 04:18:48.564 -07 000000438 INF: FPGA: Recv ZDACW
17-03-18 04:18:48.574 -07 000000012 INF: FPGA: 'ZDACW 28593' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 04:18:48.584 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:48.594 -07 000000012 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:48.594 -07 000000590 INF: FPGA: Recv ZDACR 28593
17-03-18 04:18:48.604 -07 000000012 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 04:18:48.604 -07 000000012 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-18 04:18:48.734 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 04:18:48.734 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 04:18:48.734 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:48.734 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 04:18:48.734 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 04:18:48.734 -07 000000625 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:48.734 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:48.734 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 04:18:48.734 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:48.744 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 04:18:48.954 -07 000000479 INF: FPGA: Recv YMVTILE
17-03-18 04:18:48.954 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 04:18:49.004 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:49.014 -07 000000590 INF: FPGA: Recv YRDPOS 139684
17-03-18 04:18:49.014 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 04:18:49.014 -07 000000561 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:49.014 -07 000000561 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 04:18:49.014 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.841 mm, average velocity = 2.117 mm/sec
17-03-18 04:18:49.964 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:49.964 -07 000000625 INF: FPGA: Recv YRDPOS 139685
17-03-18 04:18:49.974 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:49.974 -07 000000561 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:50.004 -07 000000561 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:50.004 -07 000000561 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 04:18:50.004 -07 000000561 INF: Y Motor: Moved to 68.2056 after 1451 ms (table move)
17-03-18 04:18:50.004 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130890 mm (DAC = 28593)
17-03-18 04:18:50.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.004 -07 000000012 INF: FPGA: Recv ZSGSRD 29664
17-03-18 04:18:50.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:18:50.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.014 -07 000000447 INF: FPGA: Recv ZSGSRD 29668
17-03-18 04:18:50.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.024 -07 000000480 INF: FPGA: Recv ZSGSRD 29656
17-03-18 04:18:50.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.034 -07 000000618 INF: FPGA: Recv ZSGSRD 29668
17-03-18 04:18:50.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.044 -07 000000512 INF: FPGA: Recv ZSGSRD 29662
17-03-18 04:18:50.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.054 -07 000000618 INF: FPGA: Recv ZSGSRD 29663
17-03-18 04:18:50.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.064 -07 000000561 INF: FPGA: Recv ZSGSRD 29661
17-03-18 04:18:50.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.074 -07 000000579 INF: FPGA: Recv ZSGSRD 29661
17-03-18 04:18:50.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.084 -07 000000626 INF: FPGA: Recv ZSGSRD 29664
17-03-18 04:18:50.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.094 -07 000000455 INF: FPGA: Recv ZSGSRD 29670
17-03-18 04:18:50.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.104 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:50.104 -07 000000512 INF: FPGA: Recv ZPIEZORD 25191
17-03-18 04:18:50.114 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.114 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.363 V. Piezo Error = -9.8 V.
17-03-18 04:18:50.114 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29664 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29664 (-130.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29656 (-130.1 uncal um), Max = 29670 (-130.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 04:18:50.114 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29664, posNoise = 6, negNoise = 8
17-03-18 04:18:50.114 -07 000000610 INF: Z Motor: After move to -0.130890, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:50.114 -07 000000610 INF: Z Motor: Settle wait time = 1451 ms, measure time = 109 ms (allowed 150 ms), total time = 1560 ms
17-03-18 04:18:50.114 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:50.164 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1613 ms
17-03-18 04:18:50.164 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:50.164 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.130891180984332. ----------
17-03-18 04:18:50.164 -07 000000610 INF: Cycle	123	Tile	11	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:50.164 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28416, sync = True, waitForSettling = True)
17-03-18 04:18:50.164 -07 000000610 INF: Z Motor: Moving to -0.130080 mm, started at -0.130891 mm, distance = 0.81 um
17-03-18 04:18:50.164 -07 000000610 INF: FPGA: Xmit ZDACW 28416\n [Z Motor]
17-03-18 04:18:50.164 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 04:18:50.174 -07 000000610 INF: FPGA: 'ZDACW 28416' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:50.174 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:50.174 -07 000000487 INF: FPGA: Recv ZDACR 28416
17-03-18 04:18:50.184 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.184 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:50.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.334 -07 000000012 INF: FPGA: Recv ZSGSRD 29538
17-03-18 04:18:50.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:50.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.344 -07 000000608 INF: FPGA: Recv ZSGSRD 29540
17-03-18 04:18:50.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.354 -07 000000501 INF: FPGA: Recv ZSGSRD 29542
17-03-18 04:18:50.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.364 -07 000000480 INF: FPGA: Recv ZSGSRD 29535
17-03-18 04:18:50.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.374 -07 000000590 INF: FPGA: Recv ZSGSRD 29538
17-03-18 04:18:50.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.384 -07 000000438 INF: FPGA: Recv ZSGSRD 29537
17-03-18 04:18:50.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:50.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.394 -07 000000512 INF: FPGA: Recv ZSGSRD 29541
17-03-18 04:18:50.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.404 -07 000000626 INF: FPGA: Recv ZSGSRD 29540
17-03-18 04:18:50.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.414 -07 000000608 INF: FPGA: Recv ZSGSRD 29536
17-03-18 04:18:50.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:50.424 -07 000000618 INF: FPGA: Recv ZSGSRD 29537
17-03-18 04:18:50.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.434 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:50.434 -07 000000480 INF: FPGA: Recv ZPIEZORD 24989
17-03-18 04:18:50.444 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:50.444 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.336 V. Piezo Error = -10.0 V.
17-03-18 04:18:50.444 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.1 um, Read 10 ADC samples: Avg = 29538 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29538 (-129.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29535 (-129.3 uncal um), Max = 29542 (-129.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 04:18:50.444 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29538, posNoise = 4, negNoise = 3
17-03-18 04:18:50.444 -07 000000610 INF: Z Motor: After move to -0.130080, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:50.444 -07 000000610 INF: Z Motor: MoveAbsStepped took 284 ms)
17-03-18 04:18:50.454 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:50.454 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:50.454 -07 000000474 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:50.454 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:50.454 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:50.454 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:50.454 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:50.454 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:50.454 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:50.454 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:50.454 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:50.454 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:50.454 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:18:50.454 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:50.454 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:50.454 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:50.474 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms.
17-03-18 04:18:50.474 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 04:18:50.474 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 17 ms.
17-03-18 04:18:50.474 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 04:18:50.474 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28593 150\n [Camera]
17-03-18 04:18:50.674 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:51.094 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:51.094 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:51.094 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:51.094 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:51.094 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 04:18:51.094 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:51.094 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:51.104 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:51.234 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:51.234 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 04:18:51.284 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28593 803
17-03-18 04:18:51.444 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning grn on 956
17-03-18 04:18:51.484 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 389 ms.
17-03-18 04:18:51.484 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 04:18:51.484 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:51.494 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:51.494 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 04:18:51.604 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 367 ms.
17-03-18 04:18:51.604 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms.
17-03-18 04:18:51.604 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:51.604 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:51.614 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 515 ms.
17-03-18 04:18:51.644 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1156
17-03-18 04:18:51.644 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1156
17-03-18 04:18:51.644 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:51.644 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:51.644 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 04:18:51.644 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1156
17-03-18 04:18:51.644 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1156
17-03-18 04:18:51.644 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:51.644 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:51.644 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) start.
17-03-18 04:18:51.654 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:51.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:51.834 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:18:51.834 -07 000000487 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:51.834 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28593 150' command took 2 ms to send, 1342 ms to get response, and 1353 ms overall
17-03-18 04:18:51.834 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 04:18:51.834 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.20556640625, Z-Position -0.13008173025447. ------
17-03-18 04:18:51.834 -07 000000625 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:18:51.834 -07 000000611 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13673 mm
17-03-18 04:18:51.834 -07 000000611 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:51.844 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:18:51.844 -07 000000625 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:18:51.844 -07 000000625 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:18:51.844 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 29868, sync = True, waitForSettling = False)
17-03-18 04:18:51.844 -07 000000447 INF: Z Motor: Moving to -0.136727 mm, started at -0.130082 mm, distance = -6.65 um
17-03-18 04:18:51.844 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 04:18:51.844 -07 000000444 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm
17-03-18 04:18:51.854 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:51.854 -07 000000512 INF: FPGA: Recv YRDPOS 139685
17-03-18 04:18:51.864 -07 000000447 INF: FPGA: Xmit ZDACW 29868\n [Z Motor]
17-03-18 04:18:51.864 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 04:18:51.864 -07 000000444 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:51.864 -07 000000444 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:51.864 -07 000000444 INF: Y Motor: Moving 1339 steps-15
17-03-18 04:18:51.864 -07 000000474 INF: FPGA: Recv ZDACW
17-03-18 04:18:51.874 -07 000000447 INF: FPGA: 'ZDACW 29868' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 04:18:51.874 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:51.884 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:51.884 -07 000000438 INF: FPGA: Recv ZDACR 29868
17-03-18 04:18:51.894 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:51.894 -07 000000447 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet))
17-03-18 04:18:52.024 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 04:18:52.024 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 04:18:52.024 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:52.024 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 04:18:52.024 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 04:18:52.024 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:52.034 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:52.034 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 04:18:52.034 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 04:18:52.034 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 04:18:52.044 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:18:52.044 -07 000000625 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-18 04:18:52.244 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 04:18:52.244 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 04:18:52.294 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:52.304 -07 000000618 INF: FPGA: Recv YRDPOS 141368
17-03-18 04:18:52.304 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:18:52.304 -07 000000444 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:52.304 -07 000000444 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 04:18:52.304 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.837 mm, average velocity = 2.163 mm/sec
17-03-18 04:18:53.254 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:53.254 -07 000000626 INF: FPGA: Recv YRDPOS 141368
17-03-18 04:18:53.264 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:53.264 -07 000000444 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:53.294 -07 000000444 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:53.294 -07 000000444 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:18:53.294 -07 000000444 INF: Y Motor: Moved to 69.0273 after 1447 ms (table move)
17-03-18 04:18:53.294 -07 000000611 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136727 mm (DAC = 29868)
17-03-18 04:18:53.294 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:53.294 -07 000000512 INF: FPGA: Recv ZSGSRD 30577
17-03-18 04:18:53.304 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:53.304 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:53.304 -07 000000625 INF: FPGA: Recv ZSGSRD 30567
17-03-18 04:18:53.314 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:53.314 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:53.314 -07 000000487 INF: FPGA: Recv ZSGSRD 30570
17-03-18 04:18:53.324 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:53.324 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:53.324 -07 000000561 INF: FPGA: Recv ZSGSRD 30564
17-03-18 04:18:53.334 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:53.334 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:53.334 -07 000000590 INF: FPGA: Recv ZSGSRD 30574
17-03-18 04:18:53.344 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:53.344 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:53.344 -07 000000608 INF: FPGA: Recv ZSGSRD 30575
17-03-18 04:18:53.354 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:53.354 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:53.354 -07 000000579 INF: FPGA: Recv ZSGSRD 30567
17-03-18 04:18:53.364 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:53.364 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:53.364 -07 000000618 INF: FPGA: Recv ZSGSRD 30574
17-03-18 04:18:53.374 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:53.374 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:53.374 -07 000000625 INF: FPGA: Recv ZSGSRD 30572
17-03-18 04:18:53.384 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:53.384 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:53.384 -07 000000474 INF: FPGA: Recv ZSGSRD 30574
17-03-18 04:18:53.394 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:53.394 -07 000000611 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:53.394 -07 000000608 INF: FPGA: Recv ZPIEZORD 26357
17-03-18 04:18:53.404 -07 000000611 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:53.404 -07 000000611 INF: Z Motor: Piezo is near 36.3 V (nominally 0 to 100 V), expect near 45.6 V, since DAC is at 4.558 V. Piezo Error = -9.3 V.
17-03-18 04:18:53.404 -07 000000611 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.7 um, Read 10 ADC samples: Avg = 30571 (-135.9 uncal um), Error = 0.8 uncal um, Median = 30573 (-135.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 30564 (-135.9 uncal um), Max = 30577 (-136.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:18:53.404 -07 000000611 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30571, posNoise = 6, negNoise = 7
17-03-18 04:18:53.404 -07 000000611 INF: Z Motor: After move to -0.136727, error = 0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:53.404 -07 000000611 INF: Z Motor: Settle wait time = 1452 ms, measure time = 105 ms (allowed 150 ms), total time = 1557 ms
17-03-18 04:18:53.404 -07 000000611 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:53.454 -07 000000611 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 04:18:53.454 -07 000000611 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:53.454 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:53.454 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:53.454 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:53.454 -07 000000585 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:53.454 -07 000000012 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:18:53.454 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:53.454 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:53.454 -07 000000012 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:18:53.464 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.001704,
17-03-18 04:18:53.464 -07 000000012 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 04:18:53.464 -07 000000012 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:18:53.474 -07 000000012 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 04:18:53.474 -07 000000012 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 04:18:53.484 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:18:53.524 -07 000000608 INF: FPGA: Recv @CAMSNAP turning led on 42
17-03-18 04:18:53.824 -07 000000625 INF: FPGA: Recv @CAMSNAP img rdy 342
17-03-18 04:18:53.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 342
17-03-18 04:18:53.824 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:18:53.824 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-18 04:18:53.864 -07 000000512 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:18:53.864 -07 000000438 INF: FPGA: Recv CAMSNAP
17-03-18 04:18:53.864 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 374 ms to get response, and 388 ms overall
17-03-18 04:18:53.954 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 04:18:53.954 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:53.954 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:18:53.954 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 04:18:54.064 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:18:54.064 -07 000000480 INF: Autofocus start
17-03-18 04:18:54.064 -07 000000480 INF: MeasureProfile start
17-03-18 04:18:54.064 -07 000000611 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:18:54.074 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:18:54.074 -07 000000501 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:18:54.074 -07 000000480 INF: MeasureProfile done
17-03-18 04:18:54.074 -07 000000480 INF: X=-119  Z correction [um]=-0.5826735
17-03-18 04:18:54.074 -07 000000480 INF: Autofocus finished
17-03-18 04:18:54.274 -07 000000479 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:18:54.274 -07 000000501 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-18 04:18:54.274 -07 000000610 INF: Suspending Skipping AutoFocus for the next 6 cycles.
17-03-18 04:18:54.274 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.136717941396909. ----------
17-03-18 04:18:54.274 -07 000000610 INF: Cycle	123	Tile	12	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:54.284 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28254, sync = True, waitForSettling = True)
17-03-18 04:18:54.284 -07 000000610 INF: Z Motor: Moving to -0.129339 mm, started at -0.136718 mm, distance = 7.38 um
17-03-18 04:18:54.294 -07 000000610 INF: FPGA: Xmit ZDACW 28254\n [Z Motor]
17-03-18 04:18:54.294 -07 000000012 INF: FPGA: Recv ZDACW
17-03-18 04:18:54.304 -07 000000610 INF: FPGA: 'ZDACW 28254' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:54.304 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:54.304 -07 000000501 INF: FPGA: Recv ZDACR 28254
17-03-18 04:18:54.314 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.314 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:54.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:54.464 -07 000000447 INF: FPGA: Recv ZSGSRD 29426
17-03-18 04:18:54.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:54.474 -07 000000501 INF: FPGA: Recv ZSGSRD 29424
17-03-18 04:18:54.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:54.484 -07 000000480 INF: FPGA: Recv ZSGSRD 29421
17-03-18 04:18:54.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:54.494 -07 000000012 INF: FPGA: Recv ZSGSRD 29420
17-03-18 04:18:54.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:54.504 -07 000000561 INF: FPGA: Recv ZSGSRD 29424
17-03-18 04:18:54.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:54.514 -07 000000438 INF: FPGA: Recv ZSGSRD 29425
17-03-18 04:18:54.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:54.524 -07 000000474 INF: FPGA: Recv ZSGSRD 29417
17-03-18 04:18:54.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:54.534 -07 000000444 INF: FPGA: Recv ZSGSRD 29421
17-03-18 04:18:54.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:54.544 -07 000000626 INF: FPGA: Recv ZSGSRD 29427
17-03-18 04:18:54.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:54.554 -07 000000585 INF: FPGA: Recv ZSGSRD 29428
17-03-18 04:18:54.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.564 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:54.564 -07 000000438 INF: FPGA: Recv ZPIEZORD 24884
17-03-18 04:18:54.574 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:54.574 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.311 V. Piezo Error = -10.0 V.
17-03-18 04:18:54.574 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.3 um, Read 10 ADC samples: Avg = 29423 (-128.6 uncal um), Error = 0.8 uncal um, Median = 29424 (-128.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29417 (-128.5 uncal um), Max = 29428 (-128.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:18:54.574 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29423, posNoise = 5, negNoise = 6
17-03-18 04:18:54.574 -07 000000610 INF: Z Motor: After move to -0.129339, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:54.574 -07 000000610 INF: Z Motor: MoveAbsStepped took 290 ms)
17-03-18 04:18:54.574 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:54.574 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:54.574 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:54.574 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:54.574 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:54.574 -07 000000585 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:54.574 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:54.574 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:54.574 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:54.574 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:54.574 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:54.574 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:54.584 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 04:18:54.584 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:54.584 -07 000000585 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:18:54.584 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:54.584 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 04:18:54.584 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 04:18:54.584 -07 000000585 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 04:18:54.584 -07 000000585 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 04:18:54.594 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28430 150\n [Camera]
17-03-18 04:18:54.794 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:55.214 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:55.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:55.214 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:55.214 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:55.214 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) start.
17-03-18 04:18:55.214 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:55.214 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:55.214 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:55.344 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:55.344 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) start.
17-03-18 04:18:55.404 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28430 803
17-03-18 04:18:55.554 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:55.594 -07 000000479 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 04:18:55.594 -07 000000479 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 04:18:55.594 -07 000000479 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:55.604 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:55.604 -07 000000479 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 04:18:55.714 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 04:18:55.714 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 04:18:55.714 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:55.714 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:55.724 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 508 ms.
17-03-18 04:18:55.754 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:55.754 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:55.754 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:55.754 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:55.754 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 04:18:55.754 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:55.754 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:55.754 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:55.764 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:55.764 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) start.
17-03-18 04:18:55.944 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:18:55.944 -07 000000437 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:55.944 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28430 150' command took 2 ms to send, 1347 ms to get response, and 1353 ms overall
17-03-18 04:18:55.944 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 04:18:55.944 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 13 at Y-position 69.02734375, Z-Position -0.129342945858168. ------
17-03-18 04:18:55.954 -07 000000501 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13571 mm
17-03-18 04:18:55.954 -07 000000501 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:55.954 -07 000000479 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:18:55.954 -07 000000474 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:18:55.954 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 04:18:55.954 -07 000000626 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-18 04:18:55.964 -07 000000479 INF: FPGA: 'FOCMRRCUR 80' command took 2 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:18:55.964 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:55.964 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 29645, sync = True, waitForSettling = False)
17-03-18 04:18:55.964 -07 000000437 INF: Z Motor: Moving to -0.135706 mm, started at -0.129343 mm, distance = -6.36 um
17-03-18 04:18:55.964 -07 000000579 INF: FPGA: Recv YRDPOS 141369
17-03-18 04:18:55.974 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:55.974 -07 000000626 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:55.974 -07 000000437 INF: FPGA: Xmit ZDACW 29645\n [Z Motor]
17-03-18 04:18:55.974 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 04:18:55.974 -07 000000626 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:55.974 -07 000000626 INF: Y Motor: Moving 1352 steps-31
17-03-18 04:18:55.984 -07 000000437 INF: FPGA: 'ZDACW 29645' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 04:18:55.984 -07 000000479 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:18:55.994 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:18:56.004 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:56.004 -07 000000480 INF: FPGA: Recv ZDACR 29645
17-03-18 04:18:56.014 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 04:18:56.014 -07 000000437 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-18 04:18:56.134 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 04:18:56.134 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 04:18:56.134 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:56.144 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:56.144 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 04:18:56.144 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 04:18:56.144 -07 000000625 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:56.144 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:56.144 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 04:18:56.144 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 04:18:56.184 -07 000000447 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:18:56.184 -07 000000479 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall
17-03-18 04:18:56.364 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 04:18:56.364 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-18 04:18:56.414 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:56.414 -07 000000438 INF: FPGA: Recv YRDPOS 143080
17-03-18 04:18:56.424 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:56.424 -07 000000626 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:56.424 -07 000000626 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 04:18:56.424 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.845 mm, average velocity = 2.145 mm/sec
17-03-18 04:18:56.654 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:18:56.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:18:57.374 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:57.374 -07 000000625 INF: FPGA: Recv YRDPOS 143080
17-03-18 04:18:57.384 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:57.384 -07 000000626 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:57.414 -07 000000626 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:18:57.414 -07 000000626 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:18:57.414 -07 000000626 INF: Y Motor: Moved to 69.8633 after 1452 ms (table move)
17-03-18 04:18:57.414 -07 000000501 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135706 mm (DAC = 29645)
17-03-18 04:18:57.414 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:57.414 -07 000000474 INF: FPGA: Recv ZSGSRD 30418
17-03-18 04:18:57.424 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:18:57.424 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:57.424 -07 000000590 INF: FPGA: Recv ZSGSRD 30421
17-03-18 04:18:57.434 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:57.434 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:57.434 -07 000000455 INF: FPGA: Recv ZSGSRD 30419
17-03-18 04:18:57.444 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:57.444 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:57.444 -07 000000437 INF: FPGA: Recv ZSGSRD 30421
17-03-18 04:18:57.454 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:57.454 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:57.454 -07 000000585 INF: FPGA: Recv ZSGSRD 30411
17-03-18 04:18:57.464 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:57.464 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:57.464 -07 000000512 INF: FPGA: Recv ZSGSRD 30415
17-03-18 04:18:57.474 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:57.474 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:57.474 -07 000000611 INF: FPGA: Recv ZSGSRD 30414
17-03-18 04:18:57.484 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:57.484 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:57.484 -07 000000561 INF: FPGA: Recv ZSGSRD 30407
17-03-18 04:18:57.494 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:57.494 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:57.494 -07 000000438 INF: FPGA: Recv ZSGSRD 30413
17-03-18 04:18:57.504 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:57.504 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:57.504 -07 000000480 INF: FPGA: Recv ZSGSRD 30418
17-03-18 04:18:57.514 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:57.514 -07 000000501 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:57.514 -07 000000474 INF: FPGA: Recv ZPIEZORD 26219
17-03-18 04:18:57.524 -07 000000501 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:57.524 -07 000000501 INF: Z Motor: Piezo is near 36.0 V (nominally 0 to 100 V), expect near 45.2 V, since DAC is at 4.524 V. Piezo Error = -9.2 V.
17-03-18 04:18:57.524 -07 000000501 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.7 um, Read 10 ADC samples: Avg = 30416 (-134.9 uncal um), Error = 0.8 uncal um, Median = 30416 (-134.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30407 (-134.9 uncal um), Max = 30421 (-135.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 04:18:57.524 -07 000000501 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30416, posNoise = 5, negNoise = 9
17-03-18 04:18:57.524 -07 000000501 INF: Z Motor: After move to -0.135706, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:57.524 -07 000000501 INF: Z Motor: Settle wait time = 1453 ms, measure time = 106 ms (allowed 150 ms), total time = 1559 ms
17-03-18 04:18:57.524 -07 000000501 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 04:18:57.574 -07 000000501 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1616 ms
17-03-18 04:18:57.574 -07 000000501 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:18:57.574 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:57.574 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:57.574 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:57.574 -07 000000585 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:57.574 -07 000000611 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:18:57.574 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:57.574 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 04:18:57.574 -07 000000611 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:18:57.584 -07 000000611 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:18:57.584 -07 000000611 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:18:57.584 -07 000000611 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 04:18:57.584 -07 000000611 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-18 04:18:57.594 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:18:57.634 -07 000000590 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:18:57.934 -07 000000561 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:18:57.934 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:18:57.934 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:18:57.934 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-18 04:18:57.974 -07 000000012 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:18:57.974 -07 000000625 INF: FPGA: Recv CAMSNAP
17-03-18 04:18:57.974 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 375 ms to get response, and 385 ms overall
17-03-18 04:18:58.054 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 114 ms.
17-03-18 04:18:58.054 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:58.054 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:18:58.054 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-18 04:18:58.074 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:18:58.074 -07 000000474 INF: Autofocus start
17-03-18 04:18:58.074 -07 000000474 INF: MeasureProfile start
17-03-18 04:18:58.074 -07 000000438 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:18:58.084 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:18:58.084 -07 000000455 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:18:58.084 -07 000000474 INF: MeasureProfile done
17-03-18 04:18:58.084 -07 000000474 INF: X=48  Z correction [um]=0.2069503
17-03-18 04:18:58.084 -07 000000474 INF: Autofocus finished
17-03-18 04:18:58.284 -07 000000561 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:18:58.284 -07 000000455 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 04:18:58.284 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.135722188514936. ----------
17-03-18 04:18:58.284 -07 000000610 INF: Cycle	123	Tile	13	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:18:58.294 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28203, sync = True, waitForSettling = True)
17-03-18 04:18:58.294 -07 000000610 INF: Z Motor: Moving to -0.129105 mm, started at -0.135722 mm, distance = 6.62 um
17-03-18 04:18:58.294 -07 000000610 INF: FPGA: Xmit ZDACW 28203\n [Z Motor]
17-03-18 04:18:58.294 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 04:18:58.304 -07 000000610 INF: FPGA: 'ZDACW 28203' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:18:58.304 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:18:58.304 -07 000000579 INF: FPGA: Recv ZDACR 28203
17-03-18 04:18:58.314 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:58.314 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:18:58.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:58.464 -07 000000618 INF: FPGA: Recv ZSGSRD 29389
17-03-18 04:18:58.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:18:58.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:58.474 -07 000000455 INF: FPGA: Recv ZSGSRD 29394
17-03-18 04:18:58.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:58.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:58.484 -07 000000479 INF: FPGA: Recv ZSGSRD 29382
17-03-18 04:18:58.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:58.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:58.494 -07 000000437 INF: FPGA: Recv ZSGSRD 29381
17-03-18 04:18:58.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:58.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:58.504 -07 000000480 INF: FPGA: Recv ZSGSRD 29389
17-03-18 04:18:58.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:58.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:58.524 -07 000000479 INF: FPGA: Recv ZSGSRD 29387
17-03-18 04:18:58.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:18:58.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:58.534 -07 000000437 INF: FPGA: Recv ZSGSRD 29380
17-03-18 04:18:58.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:58.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:58.544 -07 000000625 INF: FPGA: Recv ZSGSRD 29384
17-03-18 04:18:58.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:58.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:58.554 -07 000000438 INF: FPGA: Recv ZSGSRD 29390
17-03-18 04:18:58.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:58.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:18:58.564 -07 000000501 INF: FPGA: Recv ZSGSRD 29392
17-03-18 04:18:58.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:58.574 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:18:58.574 -07 000000590 INF: FPGA: Recv ZPIEZORD 24860
17-03-18 04:18:58.584 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:58.584 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.304 V. Piezo Error = -9.9 V.
17-03-18 04:18:58.584 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.1 um, Read 10 ADC samples: Avg = 29387 (-128.3 uncal um), Error = 0.8 uncal um, Median = 29388 (-128.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29380 (-128.3 uncal um), Max = 29394 (-128.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 04:18:58.584 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29387, posNoise = 7, negNoise = 7
17-03-18 04:18:58.584 -07 000000610 INF: Z Motor: After move to -0.129105, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:18:58.584 -07 000000610 INF: Z Motor: MoveAbsStepped took 289 ms)
17-03-18 04:18:58.584 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:18:58.584 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:18:58.584 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:18:58.584 -07 000000585 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:18:58.584 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:18:58.584 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:18:58.584 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:18:58.584 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:18:58.584 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:18:58.584 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:18:58.584 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:18:58.584 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:18:58.584 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 04:18:58.584 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:18:58.584 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 04:18:58.584 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:18:58.594 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 04:18:58.594 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 04:18:58.594 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 04:18:58.604 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 04:18:58.604 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28380 150\n [Camera]
17-03-18 04:18:58.804 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:18:58.834 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.988112,
17-03-18 04:18:59.224 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:18:59.224 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:18:59.224 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:59.224 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:59.224 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) start.
17-03-18 04:18:59.224 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:18:59.224 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:18:59.224 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:59.224 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:59.224 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 04:18:59.414 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28380 803
17-03-18 04:18:59.564 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:18:59.624 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) end. Duration was 398 ms.
17-03-18 04:18:59.624 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 04:18:59.624 -07 000000625 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:59.624 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 397 ms.
17-03-18 04:18:59.624 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 04:18:59.624 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:18:59.624 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:18:59.624 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 04:18:59.624 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:18:59.634 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-18 04:18:59.764 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:18:59.764 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:18:59.764 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:18:59.884 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:18:59.884 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:18:59.884 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:18:59.884 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:18:59.884 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 04:18:59.884 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:18:59.884 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 04:18:59.954 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:18:59.954 -07 000000012 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:18:59.954 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28380 150' command took 5 ms to send, 1345 ms to get response, and 1354 ms overall
17-03-18 04:18:59.954 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 04:18:59.954 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 14 at Y-position 69.86328125, Z-Position -0.129111674221064. ------
17-03-18 04:18:59.964 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:18:59.964 -07 000000512 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.13553 mm
17-03-18 04:18:59.964 -07 000000512 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:18:59.964 -07 000000437 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 04:18:59.964 -07 000000437 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-18 04:18:59.964 -07 000000585 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:18:59.964 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 29606, sync = True, waitForSettling = False)
17-03-18 04:18:59.964 -07 000000590 INF: Z Motor: Moving to -0.135528 mm, started at -0.129112 mm, distance = -6.42 um
17-03-18 04:18:59.974 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:18:59.974 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:18:59.974 -07 000000474 INF: FPGA: Recv YRDPOS 143081
17-03-18 04:18:59.984 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 04:18:59.984 -07 000000437 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:18:59.984 -07 000000590 INF: FPGA: Xmit ZDACW 29606\n [Z Motor]
17-03-18 04:18:59.984 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 04:18:59.984 -07 000000437 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:18:59.984 -07 000000437 INF: Y Motor: Moving 1342 steps-19
17-03-18 04:18:59.994 -07 000000590 INF: FPGA: 'ZDACW 29606' command took 1 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 04:18:59.994 -07 000000561 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:19:00.004 -07 000000437 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:19:00.014 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:00.014 -07 000000480 INF: FPGA: Recv ZDACR 29606
17-03-18 04:19:00.024 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 04:19:00.024 -07 000000590 INF: Z Motor: MoveAbsStepped took 56 ms (did NOT wait for settling yet))
17-03-18 04:19:00.194 -07 000000438 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:19:00.194 -07 000000561 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall
17-03-18 04:19:00.284 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 04:19:00.284 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 04:19:00.284 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:00.284 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 402 ms.
17-03-18 04:19:00.284 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 04:19:00.284 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:00.294 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:00.294 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 528 ms.
17-03-18 04:19:00.294 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:00.304 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms.
17-03-18 04:19:00.374 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 04:19:00.374 -07 000000437 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 392 ms overall
17-03-18 04:19:00.424 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:00.434 -07 000000444 INF: FPGA: Recv YRDPOS 144770
17-03-18 04:19:00.434 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 04:19:00.434 -07 000000437 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:00.434 -07 000000437 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 04:19:00.434 -07 000000437 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 392 ms, distance = 0.839 mm, average velocity = 2.141 mm/sec
17-03-18 04:19:01.384 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:01.384 -07 000000579 INF: FPGA: Recv YRDPOS 144770
17-03-18 04:19:01.394 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:01.394 -07 000000437 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:01.424 -07 000000437 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:19:01.424 -07 000000437 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:19:01.424 -07 000000437 INF: Y Motor: Moved to 70.6885 after 1457 ms (table move)
17-03-18 04:19:01.424 -07 000000512 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135528 mm (DAC = 29606)
17-03-18 04:19:01.424 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:01.424 -07 000000501 INF: FPGA: Recv ZSGSRD 30387
17-03-18 04:19:01.434 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:19:01.434 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:01.434 -07 000000437 INF: FPGA: Recv ZSGSRD 30383
17-03-18 04:19:01.444 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:01.444 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:01.444 -07 000000455 INF: FPGA: Recv ZSGSRD 30389
17-03-18 04:19:01.454 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:01.454 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:01.454 -07 000000437 INF: FPGA: Recv ZSGSRD 30389
17-03-18 04:19:01.464 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:01.464 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:01.464 -07 000000455 INF: FPGA: Recv ZSGSRD 30388
17-03-18 04:19:01.474 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:01.474 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:01.474 -07 000000501 INF: FPGA: Recv ZSGSRD 30387
17-03-18 04:19:01.484 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:01.484 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:01.484 -07 000000618 INF: FPGA: Recv ZSGSRD 30383
17-03-18 04:19:01.494 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:01.494 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:01.494 -07 000000455 INF: FPGA: Recv ZSGSRD 30386
17-03-18 04:19:01.504 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:01.504 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:01.504 -07 000000012 INF: FPGA: Recv ZSGSRD 30388
17-03-18 04:19:01.514 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:01.514 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:01.514 -07 000000474 INF: FPGA: Recv ZSGSRD 30386
17-03-18 04:19:01.524 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:01.524 -07 000000512 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:01.524 -07 000000625 INF: FPGA: Recv ZPIEZORD 26197
17-03-18 04:19:01.534 -07 000000512 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:01.534 -07 000000512 INF: Z Motor: Piezo is near 36.0 V (nominally 0 to 100 V), expect near 45.2 V, since DAC is at 4.518 V. Piezo Error = -9.2 V.
17-03-18 04:19:01.534 -07 000000512 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.5 um, Read 10 ADC samples: Avg = 30387 (-134.7 uncal um), Error = 0.8 uncal um, Median = 30387 (-134.7 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 30383 (-134.7 uncal um), Max = 30389 (-134.8 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 04:19:01.534 -07 000000512 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30387, posNoise = 2, negNoise = 4
17-03-18 04:19:01.534 -07 000000512 INF: Z Motor: After move to -0.135528, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:01.534 -07 000000512 INF: Z Motor: Settle wait time = 1460 ms, measure time = 106 ms (allowed 150 ms), total time = 1566 ms
17-03-18 04:19:01.534 -07 000000512 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 04:19:01.584 -07 000000512 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1619 ms
17-03-18 04:19:01.584 -07 000000512 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:19:01.584 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:01.584 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:01.584 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:01.584 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:19:01.584 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:01.584 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:01.584 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 04:19:01.584 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:19:01.594 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:19:01.594 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:19:01.594 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 04:19:01.594 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms.
17-03-18 04:19:01.604 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:19:01.644 -07 000000618 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:19:01.654 -07 000000437 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:19:01.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:19:01.944 -07 000000585 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:19:01.944 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:19:01.944 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:19:01.944 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) start.
17-03-18 04:19:01.984 -07 000000626 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:19:01.984 -07 000000561 INF: FPGA: Recv CAMSNAP
17-03-18 04:19:01.984 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 384 ms overall
17-03-18 04:19:02.064 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) end. Duration was 116 ms.
17-03-18 04:19:02.064 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:02.064 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:19:02.064 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-18 04:19:02.084 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:19:02.084 -07 000000012 INF: Autofocus start
17-03-18 04:19:02.084 -07 000000012 INF: MeasureProfile start
17-03-18 04:19:02.084 -07 000000447 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:19:02.094 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:19:02.094 -07 000000618 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:19:02.094 -07 000000012 INF: MeasureProfile done
17-03-18 04:19:02.094 -07 000000012 INF: X=0  Z correction [um]=-0.02394831
17-03-18 04:19:02.094 -07 000000012 INF: Autofocus finished
17-03-18 04:19:02.294 -07 000000501 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:19:02.294 -07 000000618 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 04:19:02.294 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.135535886362825. ----------
17-03-18 04:19:02.304 -07 000000610 INF: Cycle	123	Tile	14	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:19:02.304 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28113, sync = True, waitForSettling = True)
17-03-18 04:19:02.304 -07 000000610 INF: Z Motor: Moving to -0.128693 mm, started at -0.135536 mm, distance = 6.84 um
17-03-18 04:19:02.304 -07 000000610 INF: FPGA: Xmit ZDACW 28113\n [Z Motor]
17-03-18 04:19:02.304 -07 000000012 INF: FPGA: Recv ZDACW
17-03-18 04:19:02.314 -07 000000610 INF: FPGA: 'ZDACW 28113' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:19:02.314 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:02.314 -07 000000438 INF: FPGA: Recv ZDACR 28113
17-03-18 04:19:02.324 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:02.324 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:19:02.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:02.474 -07 000000480 INF: FPGA: Recv ZSGSRD 29321
17-03-18 04:19:02.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:19:02.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:02.484 -07 000000625 INF: FPGA: Recv ZSGSRD 29323
17-03-18 04:19:02.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:02.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:02.494 -07 000000474 INF: FPGA: Recv ZSGSRD 29321
17-03-18 04:19:02.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:02.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:02.504 -07 000000437 INF: FPGA: Recv ZSGSRD 29324
17-03-18 04:19:02.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:02.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:02.514 -07 000000561 INF: FPGA: Recv ZSGSRD 29329
17-03-18 04:19:02.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:02.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:02.524 -07 000000012 INF: FPGA: Recv ZSGSRD 29321
17-03-18 04:19:02.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:02.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:02.534 -07 000000625 INF: FPGA: Recv ZSGSRD 29324
17-03-18 04:19:02.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:02.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:02.544 -07 000000618 INF: FPGA: Recv ZSGSRD 29318
17-03-18 04:19:02.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:02.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:02.554 -07 000000579 INF: FPGA: Recv ZSGSRD 29328
17-03-18 04:19:02.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:02.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:02.564 -07 000000611 INF: FPGA: Recv ZSGSRD 29330
17-03-18 04:19:02.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:02.574 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:02.574 -07 000000585 INF: FPGA: Recv ZPIEZORD 24758
17-03-18 04:19:02.584 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:02.584 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.290 V. Piezo Error = -10.0 V.
17-03-18 04:19:02.584 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.7 um, Read 10 ADC samples: Avg = 29324 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29324 (-127.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29318 (-127.9 uncal um), Max = 29330 (-128.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:19:02.584 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29324, posNoise = 6, negNoise = 6
17-03-18 04:19:02.584 -07 000000610 INF: Z Motor: After move to -0.128693, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:02.584 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 04:19:02.584 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:02.584 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:02.584 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:02.584 -07 000000479 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:02.584 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:19:02.584 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:02.584 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:19:02.584 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:19:02.584 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:19:02.584 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:19:02.584 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:19:02.584 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:19:02.594 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:19:02.594 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:19:02.594 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:19:02.594 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:19:02.604 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 04:19:02.604 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 04:19:02.604 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 04:19:02.604 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 04:19:02.604 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28290 150\n [Camera]
17-03-18 04:19:02.804 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:19:03.224 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:19:03.224 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:19:03.224 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:03.224 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:03.224 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) start.
17-03-18 04:19:03.224 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:19:03.224 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:19:03.224 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:03.224 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:03.224 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) start.
17-03-18 04:19:03.414 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28290 803
17-03-18 04:19:03.564 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:19:03.604 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 04:19:03.604 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 04:19:03.604 -07 000000479 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:03.604 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 04:19:03.604 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 04:19:03.604 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:03.604 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:19:03.614 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:19:03.614 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 04:19:03.614 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 04:19:03.764 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:19:03.764 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:19:03.764 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:03.874 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:19:03.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:19:03.884 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:03.884 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:03.884 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2369425112, 0x0, 391868352) start.
17-03-18 04:19:03.884 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:03.884 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) start.
17-03-18 04:19:03.954 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:19:03.954 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:19:03.954 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28290 150' command took 2 ms to send, 1347 ms to get response, and 1354 ms overall
17-03-18 04:19:03.954 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 04:19:03.964 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.6884765625, Z-Position -0.128706948856133. ------
17-03-18 04:19:03.964 -07 000000487 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:19:03.964 -07 000000479 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.13536 mm
17-03-18 04:19:03.964 -07 000000479 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:19:03.964 -07 000000585 INF: Z Motor: Entering MoveAbsStepped (DAC = 29569, sync = True, waitForSettling = False)
17-03-18 04:19:03.964 -07 000000585 INF: Z Motor: Moving to -0.135358 mm, started at -0.128707 mm, distance = -6.65 um
17-03-18 04:19:03.964 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 04:19:03.964 -07 000000480 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 04:19:03.964 -07 000000590 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:19:03.974 -07 000000487 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:19:03.974 -07 000000585 INF: FPGA: Xmit ZDACW 29569\n [Z Motor]
17-03-18 04:19:03.974 -07 000000474 INF: FPGA: Recv ZDACW
17-03-18 04:19:03.984 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:03.984 -07 000000585 INF: FPGA: 'ZDACW 29569' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 04:19:03.984 -07 000000437 INF: FPGA: Recv YRDPOS 144771
17-03-18 04:19:03.994 -07 000000487 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:19:03.994 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 04:19:03.994 -07 000000480 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:03.994 -07 000000480 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:19:03.994 -07 000000480 INF: Y Motor: Moving 1350 steps-29
17-03-18 04:19:04.004 -07 000000585 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:04.004 -07 000000561 INF: FPGA: Recv ZDACR 29569
17-03-18 04:19:04.014 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:19:04.014 -07 000000585 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 04:19:04.014 -07 000000585 INF: Z Motor: MoveAbsStepped took 44 ms (did NOT wait for settling yet))
17-03-18 04:19:04.194 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.977204,
17-03-18 04:19:04.194 -07 000000012 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:19:04.194 -07 000000487 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 04:19:04.284 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2369425112, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 04:19:04.284 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 04:19:04.284 -07 000000625 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:04.284 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) end. Duration was 393 ms.
17-03-18 04:19:04.284 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 04:19:04.284 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:04.284 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:04.284 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 519 ms.
17-03-18 04:19:04.284 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:04.294 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 04:19:04.384 -07 000000487 INF: FPGA: Recv YMVTILE
17-03-18 04:19:04.394 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 373 ms to get response, and 398 ms overall
17-03-18 04:19:04.444 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:04.454 -07 000000579 INF: FPGA: Recv YRDPOS 146470
17-03-18 04:19:04.454 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 04:19:04.454 -07 000000480 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:04.454 -07 000000480 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 04:19:04.454 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 405 ms, distance = 0.844 mm, average velocity = 2.084 mm/sec
17-03-18 04:19:05.404 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:05.404 -07 000000012 INF: FPGA: Recv YRDPOS 146471
17-03-18 04:19:05.414 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:05.414 -07 000000480 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:05.444 -07 000000480 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:19:05.444 -07 000000480 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 04:19:05.444 -07 000000480 INF: Y Motor: Moved to 71.5190 after 1474 ms (table move)
17-03-18 04:19:05.444 -07 000000479 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135358 mm (DAC = 29569)
17-03-18 04:19:05.444 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:05.444 -07 000000585 INF: FPGA: Recv ZSGSRD 30362
17-03-18 04:19:05.454 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:19:05.454 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:05.454 -07 000000608 INF: FPGA: Recv ZSGSRD 30365
17-03-18 04:19:05.464 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:05.464 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:05.464 -07 000000579 INF: FPGA: Recv ZSGSRD 30367
17-03-18 04:19:05.474 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:05.474 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:05.474 -07 000000487 INF: FPGA: Recv ZSGSRD 30361
17-03-18 04:19:05.484 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:05.484 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:05.484 -07 000000611 INF: FPGA: Recv ZSGSRD 30361
17-03-18 04:19:05.494 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:05.494 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:05.494 -07 000000455 INF: FPGA: Recv ZSGSRD 30357
17-03-18 04:19:05.504 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:05.504 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:05.504 -07 000000447 INF: FPGA: Recv ZSGSRD 30357
17-03-18 04:19:05.514 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:05.514 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:05.514 -07 000000437 INF: FPGA: Recv ZSGSRD 30360
17-03-18 04:19:05.524 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:05.524 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:05.524 -07 000000480 INF: FPGA: Recv ZSGSRD 30356
17-03-18 04:19:05.534 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:05.534 -07 000000479 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:05.534 -07 000000438 INF: FPGA: Recv ZSGSRD 30362
17-03-18 04:19:05.544 -07 000000479 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:05.544 -07 000000479 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:05.544 -07 000000012 INF: FPGA: Recv ZPIEZORD 26168
17-03-18 04:19:05.554 -07 000000479 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:05.554 -07 000000479 INF: Z Motor: Piezo is near 35.9 V (nominally 0 to 100 V), expect near 45.1 V, since DAC is at 4.512 V. Piezo Error = -9.2 V.
17-03-18 04:19:05.554 -07 000000479 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.4 um, Read 10 ADC samples: Avg = 30361 (-134.6 uncal um), Error = 0.8 uncal um, Median = 30361 (-134.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30356 (-134.5 uncal um), Max = 30367 (-134.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 04:19:05.554 -07 000000479 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30361, posNoise = 6, negNoise = 5
17-03-18 04:19:05.554 -07 000000479 INF: Z Motor: After move to -0.135358, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:05.554 -07 000000479 INF: Z Motor: Settle wait time = 1479 ms, measure time = 105 ms (allowed 150 ms), total time = 1584 ms
17-03-18 04:19:05.554 -07 000000479 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 04:19:05.604 -07 000000479 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1636 ms
17-03-18 04:19:05.604 -07 000000479 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:19:05.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:05.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:05.604 -07 000000611 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:19:05.604 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:05.604 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:05.604 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:05.604 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:19:05.604 -07 000000611 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:19:05.614 -07 000000611 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:19:05.614 -07 000000611 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:19:05.614 -07 000000611 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 04:19:05.614 -07 000000611 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-18 04:19:05.624 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:19:05.664 -07 000000618 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:19:05.964 -07 000000438 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:19:05.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:19:05.964 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:19:05.964 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2334002848, 0x0, 559484976) start.
17-03-18 04:19:06.004 -07 000000625 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:19:06.004 -07 000000590 INF: FPGA: Recv CAMSNAP
17-03-18 04:19:06.004 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 384 ms overall
17-03-18 04:19:06.084 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2334002848, 0x0, 559484976) end. Duration was 114 ms.
17-03-18 04:19:06.084 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:06.084 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 04:19:06.084 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-18 04:19:06.104 -07 000000444 INF: Autofocus start
17-03-18 04:19:06.104 -07 000000444 INF: MeasureProfile start
17-03-18 04:19:06.104 -07 000000474 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:19:06.104 -07 000000579 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:19:06.114 -07 000000474 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:19:06.114 -07 000000474 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:19:06.114 -07 000000444 INF: MeasureProfile done
17-03-18 04:19:06.114 -07 000000444 INF: X=-48  Z correction [um]=-0.2370583
17-03-18 04:19:06.114 -07 000000444 INF: Autofocus finished
17-03-18 04:19:06.314 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:19:06.314 -07 000000474 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 04:19:06.314 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.135368856847139. ----------
17-03-18 04:19:06.314 -07 000000610 INF: Cycle	123	Tile	15	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:19:06.324 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28029, sync = True, waitForSettling = True)
17-03-18 04:19:06.324 -07 000000610 INF: Z Motor: Moving to -0.128309 mm, started at -0.135369 mm, distance = 7.06 um
17-03-18 04:19:06.324 -07 000000610 INF: FPGA: Xmit ZDACW 28029\n [Z Motor]
17-03-18 04:19:06.324 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 04:19:06.334 -07 000000610 INF: FPGA: 'ZDACW 28029' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:19:06.334 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:06.334 -07 000000611 INF: FPGA: Recv ZDACR 28029
17-03-18 04:19:06.344 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:06.344 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:19:06.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:06.494 -07 000000444 INF: FPGA: Recv ZSGSRD 29268
17-03-18 04:19:06.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:19:06.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:06.504 -07 000000611 INF: FPGA: Recv ZSGSRD 29263
17-03-18 04:19:06.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:06.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:06.514 -07 000000501 INF: FPGA: Recv ZSGSRD 29262
17-03-18 04:19:06.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:06.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:06.524 -07 000000585 INF: FPGA: Recv ZSGSRD 29264
17-03-18 04:19:06.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:06.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:06.534 -07 000000579 INF: FPGA: Recv ZSGSRD 29257
17-03-18 04:19:06.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:06.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:06.544 -07 000000455 INF: FPGA: Recv ZSGSRD 29268
17-03-18 04:19:06.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:06.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:06.554 -07 000000590 INF: FPGA: Recv ZSGSRD 29262
17-03-18 04:19:06.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:06.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:06.564 -07 000000437 INF: FPGA: Recv ZSGSRD 29259
17-03-18 04:19:06.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:06.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:06.574 -07 000000512 INF: FPGA: Recv ZSGSRD 29265
17-03-18 04:19:06.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:06.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:06.584 -07 000000480 INF: FPGA: Recv ZSGSRD 29265
17-03-18 04:19:06.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:06.594 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:06.594 -07 000000585 INF: FPGA: Recv ZPIEZORD 24739
17-03-18 04:19:06.604 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:06.604 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.277 V. Piezo Error = -9.9 V.
17-03-18 04:19:06.604 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.3 um, Read 10 ADC samples: Avg = 29263 (-127.5 uncal um), Error = 0.8 uncal um, Median = 29264 (-127.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29257 (-127.5 uncal um), Max = 29268 (-127.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:19:06.604 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29263, posNoise = 5, negNoise = 6
17-03-18 04:19:06.604 -07 000000610 INF: Z Motor: After move to -0.128309, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:06.604 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 04:19:06.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:06.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:06.604 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:06.604 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:06.604 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:19:06.604 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:19:06.604 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:19:06.604 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:06.604 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:19:06.604 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:19:06.604 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:19:06.604 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:19:06.614 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 04:19:06.614 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:19:06.614 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:19:06.614 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:19:06.624 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 04:19:06.624 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 04:19:06.624 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 11 ms.
17-03-18 04:19:06.624 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 04:19:06.624 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28206 150\n [Camera]
17-03-18 04:19:06.654 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:19:06.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:19:06.824 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:19:07.244 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 614
17-03-18 04:19:07.244 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 614
17-03-18 04:19:07.244 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:07.244 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:07.244 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 04:19:07.244 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 614
17-03-18 04:19:07.244 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 614
17-03-18 04:19:07.254 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:07.254 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:07.254 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1111624864, 0x0, 418435064) start.
17-03-18 04:19:07.434 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28206 803
17-03-18 04:19:07.584 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:19:07.644 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1111624864, 0x0, 418435064) end. Duration was 392 ms.
17-03-18 04:19:07.644 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 04:19:07.644 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:07.644 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 04:19:07.644 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 04:19:07.644 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:07.644 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:07.644 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:07.644 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 04:19:07.654 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 404 ms.
17-03-18 04:19:07.784 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:19:07.784 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:19:07.784 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:07.784 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:07.784 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) start.
17-03-18 04:19:07.784 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:19:07.784 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:19:07.794 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:07.794 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:07.794 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 04:19:07.974 -07 000000479 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:19:07.974 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:19:07.974 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28206 150' command took 2 ms to send, 1348 ms to get response, and 1354 ms overall
17-03-18 04:19:07.984 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 04:19:07.984 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51904296875, Z-Position -0.128315071915486. ------
17-03-18 04:19:08.104 -07 000000012 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:19:08.104 -07 000000447 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.13460 mm
17-03-18 04:19:08.104 -07 000000447 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:19:08.104 -07 000000625 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:19:08.114 -07 000000012 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:19:08.114 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 04:19:08.114 -07 000000608 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-18 04:19:08.114 -07 000000487 INF: Z Motor: Entering MoveAbsStepped (DAC = 29403, sync = True, waitForSettling = False)
17-03-18 04:19:08.114 -07 000000487 INF: Z Motor: Moving to -0.134598 mm, started at -0.128315 mm, distance = -6.28 um
17-03-18 04:19:08.114 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:08.114 -07 000000611 INF: FPGA: Recv YRDPOS 146471
17-03-18 04:19:08.124 -07 000000608 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:08.124 -07 000000608 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:08.124 -07 000000608 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:19:08.124 -07 000000608 INF: Y Motor: Moving 1350 steps-29
17-03-18 04:19:08.124 -07 000000012 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:19:08.134 -07 000000487 INF: FPGA: Xmit ZDACW 29403\n [Z Motor]
17-03-18 04:19:08.134 -07 000000480 INF: FPGA: Recv ZDACW
17-03-18 04:19:08.144 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:19:08.144 -07 000000487 INF: FPGA: 'ZDACW 29403' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 04:19:08.154 -07 000000487 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:08.154 -07 000000438 INF: FPGA: Recv ZDACR 29403
17-03-18 04:19:08.164 -07 000000487 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:19:08.164 -07 000000487 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-18 04:19:08.194 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 402 ms.
17-03-18 04:19:08.194 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 04:19:08.194 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:08.194 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) end. Duration was 404 ms.
17-03-18 04:19:08.194 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 04:19:08.194 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:08.194 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:08.194 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:08.194 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 411 ms.
17-03-18 04:19:08.204 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms.
17-03-18 04:19:08.324 -07 000000444 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:19:08.334 -07 000000012 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 202 ms to get response, and 221 ms overall
17-03-18 04:19:08.514 -07 000000611 INF: FPGA: Recv YMVTILE
17-03-18 04:19:08.514 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 398 ms overall
17-03-18 04:19:08.564 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:08.574 -07 000000585 INF: FPGA: Recv YRDPOS 148171
17-03-18 04:19:08.574 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:19:08.574 -07 000000608 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:08.574 -07 000000608 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 04:19:08.574 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.844 mm, average velocity = 2.114 mm/sec
17-03-18 04:19:09.524 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:09.524 -07 000000480 INF: FPGA: Recv YRDPOS 148172
17-03-18 04:19:09.534 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:09.534 -07 000000608 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:09.554 -07 000000611 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 3.999021,
17-03-18 04:19:09.564 -07 000000608 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:19:09.564 -07 000000608 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 04:19:09.564 -07 000000608 INF: Y Motor: Moved to 72.3496 after 1455 ms (table move)
17-03-18 04:19:09.564 -07 000000447 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134598 mm (DAC = 29403)
17-03-18 04:19:09.574 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:09.574 -07 000000480 INF: FPGA: Recv ZSGSRD 30243
17-03-18 04:19:09.584 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 04:19:09.604 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:09.604 -07 000000512 INF: FPGA: Recv ZSGSRD 30236
17-03-18 04:19:09.614 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 04:19:09.614 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:09.614 -07 000000561 INF: FPGA: Recv ZSGSRD 30242
17-03-18 04:19:09.624 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:09.624 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:09.624 -07 000000611 INF: FPGA: Recv ZSGSRD 30239
17-03-18 04:19:09.634 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:09.634 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:09.634 -07 000000455 INF: FPGA: Recv ZSGSRD 30246
17-03-18 04:19:09.644 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:09.644 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:09.644 -07 000000012 INF: FPGA: Recv ZSGSRD 30235
17-03-18 04:19:09.654 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:09.654 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:09.654 -07 000000608 INF: FPGA: Recv ZSGSRD 30242
17-03-18 04:19:09.664 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:09.664 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:09.664 -07 000000579 INF: FPGA: Recv ZSGSRD 30251
17-03-18 04:19:09.674 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:09.674 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:09.674 -07 000000438 INF: FPGA: Recv ZSGSRD 30239
17-03-18 04:19:09.684 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:09.684 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:09.684 -07 000000487 INF: FPGA: Recv ZSGSRD 30239
17-03-18 04:19:09.694 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:09.694 -07 000000447 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:09.694 -07 000000480 INF: FPGA: Recv ZPIEZORD 26008
17-03-18 04:19:09.704 -07 000000447 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:09.704 -07 000000447 INF: Z Motor: Piezo is near 35.6 V (nominally 0 to 100 V), expect near 44.9 V, since DAC is at 4.487 V. Piezo Error = -9.3 V.
17-03-18 04:19:09.704 -07 000000447 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.6 um, Read 10 ADC samples: Avg = 30241 (-133.8 uncal um), Error = 0.8 uncal um, Median = 30240 (-133.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 30235 (-133.8 uncal um), Max = 30251 (-133.9 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:19:09.704 -07 000000447 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30241, posNoise = 10, negNoise = 6
17-03-18 04:19:09.704 -07 000000447 INF: Z Motor: After move to -0.134598, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:09.704 -07 000000447 INF: Z Motor: Settle wait time = 1458 ms, measure time = 131 ms (allowed 150 ms), total time = 1589 ms
17-03-18 04:19:09.704 -07 000000447 INF: Z Motor: Waiting extra 19 ms after reading position to reach expected total of 150 ms
17-03-18 04:19:09.724 -07 000000447 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1614 ms
17-03-18 04:19:09.724 -07 000000447 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:19:09.724 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:09.724 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:09.724 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:09.724 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:09.724 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:19:09.724 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:09.734 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 04:19:09.734 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:19:09.734 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:19:09.734 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:19:09.744 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 04:19:09.744 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-18 04:19:09.744 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:19:09.784 -07 000000585 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:19:10.084 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:19:10.084 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:19:10.084 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:19:10.094 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-18 04:19:10.134 -07 000000561 INF: FPGA: Recv @CAMSNAP 383
17-03-18 04:19:10.134 -07 000000444 INF: FPGA: Recv CAMSNAP
17-03-18 04:19:10.134 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 387 ms overall
17-03-18 04:19:10.204 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 114 ms.
17-03-18 04:19:10.204 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:10.204 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:19:10.204 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-18 04:19:10.234 -07 000000611 INF: Autofocus start
17-03-18 04:19:10.234 -07 000000611 INF: MeasureProfile start
17-03-18 04:19:10.234 -07 000000487 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:19:10.234 -07 000000438 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:19:10.244 -07 000000487 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:19:10.244 -07 000000487 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:19:10.244 -07 000000611 INF: MeasureProfile done
17-03-18 04:19:10.244 -07 000000611 INF: X=16  Z correction [um]=0.0530179
17-03-18 04:19:10.244 -07 000000611 INF: Autofocus finished
17-03-18 04:19:10.444 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:19:10.444 -07 000000487 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 204 ms overall
17-03-18 04:19:10.444 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.134597951390128. ----------
17-03-18 04:19:10.444 -07 000000610 INF: Cycle	123	Tile	16	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:19:10.454 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27927, sync = True, waitForSettling = True)
17-03-18 04:19:10.454 -07 000000610 INF: Z Motor: Moving to -0.127842 mm, started at -0.134598 mm, distance = 6.76 um
17-03-18 04:19:10.454 -07 000000610 INF: FPGA: Xmit ZDACW 27927\n [Z Motor]
17-03-18 04:19:10.454 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 04:19:10.464 -07 000000610 INF: FPGA: 'ZDACW 27927' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 04:19:10.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:10.464 -07 000000626 INF: FPGA: Recv ZDACR 27927
17-03-18 04:19:10.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:10.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:19:10.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:10.624 -07 000000444 INF: FPGA: Recv ZSGSRD 29187
17-03-18 04:19:10.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:19:10.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:10.634 -07 000000487 INF: FPGA: Recv ZSGSRD 29192
17-03-18 04:19:10.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:10.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:10.644 -07 000000501 INF: FPGA: Recv ZSGSRD 29188
17-03-18 04:19:10.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:10.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:10.654 -07 000000561 INF: FPGA: Recv ZSGSRD 29186
17-03-18 04:19:10.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:10.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:10.664 -07 000000474 INF: FPGA: Recv ZSGSRD 29191
17-03-18 04:19:10.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:10.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:10.674 -07 000000608 INF: FPGA: Recv ZSGSRD 29190
17-03-18 04:19:10.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:10.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:10.684 -07 000000579 INF: FPGA: Recv ZSGSRD 29187
17-03-18 04:19:10.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:10.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:10.694 -07 000000625 INF: FPGA: Recv ZSGSRD 29188
17-03-18 04:19:10.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:10.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:10.704 -07 000000474 INF: FPGA: Recv ZSGSRD 29190
17-03-18 04:19:10.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:10.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:10.714 -07 000000438 INF: FPGA: Recv ZSGSRD 29191
17-03-18 04:19:10.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:10.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:10.724 -07 000000585 INF: FPGA: Recv ZPIEZORD 24643
17-03-18 04:19:10.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:10.734 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.261 V. Piezo Error = -10.0 V.
17-03-18 04:19:10.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.8 um, Read 10 ADC samples: Avg = 29189 (-127.1 uncal um), Error = 0.8 uncal um, Median = 29189 (-127.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 29186 (-127.0 uncal um), Max = 29192 (-127.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 04:19:10.734 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29189, posNoise = 3, negNoise = 3
17-03-18 04:19:10.734 -07 000000610 INF: Z Motor: After move to -0.127842, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:10.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 04:19:10.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:10.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:10.734 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:10.734 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:10.734 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:19:10.734 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:10.734 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:19:10.744 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:19:10.744 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-18 04:19:10.744 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:19:10.744 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:19:10.744 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:19:10.744 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 04:19:10.744 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:19:10.744 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 04:19:10.744 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:19:10.754 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 04:19:10.754 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 04:19:10.754 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 04:19:10.754 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 04:19:10.754 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28104 150\n [Camera]
17-03-18 04:19:10.954 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:19:11.374 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:19:11.374 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:19:11.374 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:11.384 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:19:11.384 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:19:11.384 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:11.384 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:11.384 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 04:19:11.384 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:11.384 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) start.
17-03-18 04:19:11.564 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28104 803
17-03-18 04:19:11.654 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:19:11.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:19:11.714 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:19:11.774 -07 000000479 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 397 ms.
17-03-18 04:19:11.774 -07 000000479 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 04:19:11.774 -07 000000479 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:11.784 -07 000000479 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:19:11.784 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 04:19:11.784 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 04:19:11.784 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:11.784 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:19:11.784 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms.
17-03-18 04:19:11.784 -07 000000479 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-18 04:19:11.924 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:19:11.924 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:19:11.924 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:11.924 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:11.924 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) start.
17-03-18 04:19:11.924 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:19:11.924 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:19:11.924 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:11.924 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:11.924 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) start.
17-03-18 04:19:12.114 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:19:12.114 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:19:12.114 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28104 150' command took 3 ms to send, 1343 ms to get response, and 1353 ms overall
17-03-18 04:19:12.114 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 04:19:12.114 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.349609375, Z-Position -0.127839680216996. ------
17-03-18 04:19:12.114 -07 000000474 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:19:12.114 -07 000000625 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.13445 mm
17-03-18 04:19:12.114 -07 000000625 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:19:12.124 -07 000000585 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:19:12.124 -07 000000474 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:19:12.124 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 04:19:12.124 -07 000000501 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 04:19:12.124 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:12.124 -07 000000487 INF: Z Motor: Entering MoveAbsStepped (DAC = 29371, sync = True, waitForSettling = False)
17-03-18 04:19:12.124 -07 000000487 INF: Z Motor: Moving to -0.134452 mm, started at -0.127840 mm, distance = -6.61 um
17-03-18 04:19:12.124 -07 000000480 INF: FPGA: Recv YRDPOS 148172
17-03-18 04:19:12.134 -07 000000501 INF: FPGA: 'YRDPOS' command took 2 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 04:19:12.134 -07 000000474 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:19:12.134 -07 000000501 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:12.134 -07 000000501 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:19:12.134 -07 000000501 INF: Y Motor: Moving 1349 steps-28
17-03-18 04:19:12.144 -07 000000487 INF: FPGA: Xmit ZDACW 29371\n [Z Motor]
17-03-18 04:19:12.144 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 04:19:12.154 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:19:12.154 -07 000000487 INF: FPGA: 'ZDACW 29371' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-18 04:19:12.164 -07 000000487 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:12.164 -07 000000447 INF: FPGA: Recv ZDACR 29371
17-03-18 04:19:12.174 -07 000000487 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:19:12.174 -07 000000487 INF: Z Motor: MoveAbsStepped took 45 ms (did NOT wait for settling yet))
17-03-18 04:19:12.304 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2334002848, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 04:19:12.304 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 04:19:12.304 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:12.314 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:19:12.314 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2298580584, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 04:19:12.314 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 04:19:12.314 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:12.314 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 04:19:12.314 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 04:19:12.314 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 04:19:12.334 -07 000000618 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:19:12.334 -07 000000474 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 211 ms overall
17-03-18 04:19:12.534 -07 000000487 INF: FPGA: Recv YMVTILE
17-03-18 04:19:12.534 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 400 ms overall
17-03-18 04:19:12.574 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:12.584 -07 000000447 INF: FPGA: Recv YRDPOS 149864
17-03-18 04:19:12.584 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 04:19:12.584 -07 000000501 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:12.584 -07 000000501 INF: Y Motor: Position error before settling (table move) = -34 encoder counts (-0.017 mm)
17-03-18 04:19:12.584 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.843 mm, average velocity = 2.107 mm/sec
17-03-18 04:19:13.534 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:13.534 -07 000000474 INF: FPGA: Recv YRDPOS 149864
17-03-18 04:19:13.544 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:13.544 -07 000000501 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:13.574 -07 000000501 INF: Y Motor: After move to 73.192604, error = -0.016823, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:19:13.574 -07 000000501 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:19:13.574 -07 000000501 INF: Y Motor: Moved to 73.1758 after 1450 ms (table move)
17-03-18 04:19:13.574 -07 000000625 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134452 mm (DAC = 29371)
17-03-18 04:19:13.574 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:13.574 -07 000000480 INF: FPGA: Recv ZSGSRD 30220
17-03-18 04:19:13.584 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:19:13.584 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:13.584 -07 000000447 INF: FPGA: Recv ZSGSRD 30224
17-03-18 04:19:13.594 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:13.594 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:13.594 -07 000000561 INF: FPGA: Recv ZSGSRD 30218
17-03-18 04:19:13.604 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:13.604 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:13.604 -07 000000487 INF: FPGA: Recv ZSGSRD 30225
17-03-18 04:19:13.614 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:13.614 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:13.614 -07 000000585 INF: FPGA: Recv ZSGSRD 30226
17-03-18 04:19:13.624 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:13.624 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:13.624 -07 000000618 INF: FPGA: Recv ZSGSRD 30221
17-03-18 04:19:13.634 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:13.634 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:13.634 -07 000000012 INF: FPGA: Recv ZSGSRD 30222
17-03-18 04:19:13.644 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:13.644 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:13.644 -07 000000611 INF: FPGA: Recv ZSGSRD 30225
17-03-18 04:19:13.654 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:13.654 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:13.654 -07 000000480 INF: FPGA: Recv ZSGSRD 30215
17-03-18 04:19:13.664 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:13.664 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:13.664 -07 000000608 INF: FPGA: Recv ZSGSRD 30217
17-03-18 04:19:13.674 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:13.674 -07 000000625 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:13.674 -07 000000444 INF: FPGA: Recv ZPIEZORD 25991
17-03-18 04:19:13.684 -07 000000625 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:13.684 -07 000000625 INF: Z Motor: Piezo is near 35.5 V (nominally 0 to 100 V), expect near 44.8 V, since DAC is at 4.482 V. Piezo Error = -9.3 V.
17-03-18 04:19:13.684 -07 000000625 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.5 um, Read 10 ADC samples: Avg = 30221 (-133.7 uncal um), Error = 0.8 uncal um, Median = 30222 (-133.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30215 (-133.6 uncal um), Max = 30226 (-133.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:19:13.684 -07 000000625 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30221, posNoise = 5, negNoise = 6
17-03-18 04:19:13.684 -07 000000625 INF: Z Motor: After move to -0.134452, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:13.684 -07 000000625 INF: Z Motor: Settle wait time = 1449 ms, measure time = 106 ms (allowed 150 ms), total time = 1555 ms
17-03-18 04:19:13.684 -07 000000625 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 04:19:13.734 -07 000000625 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-18 04:19:13.734 -07 000000625 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:19:13.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:13.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:13.734 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:13.734 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:13.734 -07 000000585 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:19:13.734 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:13.734 -07 000000585 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:19:13.734 -07 000000585 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:19:13.744 -07 000000585 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:19:13.744 -07 000000585 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:19:13.744 -07 000000585 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 04:19:13.744 -07 000000585 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-18 04:19:13.754 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:19:13.794 -07 000000474 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:19:14.094 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:19:14.094 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:19:14.094 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:19:14.094 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 594000200, 0x0, 559484976) start.
17-03-18 04:19:14.134 -07 000000512 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:19:14.134 -07 000000590 INF: FPGA: Recv CAMSNAP
17-03-18 04:19:14.134 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 384 ms overall
17-03-18 04:19:14.214 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 594000200, 0x0, 559484976) end. Duration was 114 ms.
17-03-18 04:19:14.214 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:14.214 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:19:14.214 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-18 04:19:14.234 -07 000000487 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:19:14.234 -07 000000479 INF: Autofocus start
17-03-18 04:19:14.234 -07 000000479 INF: MeasureProfile start
17-03-18 04:19:14.234 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:19:14.244 -07 000000487 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:19:14.244 -07 000000487 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:19:14.244 -07 000000479 INF: MeasureProfile done
17-03-18 04:19:14.244 -07 000000479 INF: X=-23  Z correction [um]=-0.1153628
17-03-18 04:19:14.244 -07 000000479 INF: Autofocus finished
17-03-18 04:19:14.444 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:19:14.444 -07 000000487 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 205 ms overall
17-03-18 04:19:14.444 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17578125, Z-position -0.134469467147293. ----------
17-03-18 04:19:14.454 -07 000000610 INF: Cycle	123	Tile	17	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:19:14.454 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27858, sync = True, waitForSettling = True)
17-03-18 04:19:14.454 -07 000000610 INF: Z Motor: Moving to -0.127526 mm, started at -0.134469 mm, distance = 6.94 um
17-03-18 04:19:14.454 -07 000000610 INF: FPGA: Xmit ZDACW 27858\n [Z Motor]
17-03-18 04:19:14.454 -07 000000479 INF: FPGA: Recv ZDACW
17-03-18 04:19:14.464 -07 000000610 INF: FPGA: 'ZDACW 27858' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:19:14.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:14.464 -07 000000512 INF: FPGA: Recv ZDACR 27858
17-03-18 04:19:14.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:14.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:19:14.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:14.624 -07 000000487 INF: FPGA: Recv ZSGSRD 29138
17-03-18 04:19:14.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:19:14.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:14.634 -07 000000611 INF: FPGA: Recv ZSGSRD 29146
17-03-18 04:19:14.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:14.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:14.644 -07 000000590 INF: FPGA: Recv ZSGSRD 29137
17-03-18 04:19:14.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:14.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:14.654 -07 000000438 INF: FPGA: Recv ZSGSRD 29145
17-03-18 04:19:14.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:14.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:14.664 -07 000000487 INF: FPGA: Recv ZSGSRD 29140
17-03-18 04:19:14.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:14.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:14.674 -07 000000447 INF: FPGA: Recv ZSGSRD 29136
17-03-18 04:19:14.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:14.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:14.684 -07 000000512 INF: FPGA: Recv ZSGSRD 29144
17-03-18 04:19:14.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:14.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:14.694 -07 000000585 INF: FPGA: Recv ZSGSRD 29145
17-03-18 04:19:14.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:14.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:14.704 -07 000000512 INF: FPGA: Recv ZSGSRD 29143
17-03-18 04:19:14.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:14.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:14.714 -07 000000561 INF: FPGA: Recv ZSGSRD 29146
17-03-18 04:19:14.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:14.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:14.724 -07 000000608 INF: FPGA: Recv ZPIEZORD 24542
17-03-18 04:19:14.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:14.734 -07 000000610 INF: Z Motor: Piezo is near 32.4 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.251 V. Piezo Error = -10.1 V.
17-03-18 04:19:14.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29142 (-126.8 uncal um), Error = 0.8 uncal um, Median = 29144 (-126.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29136 (-126.7 uncal um), Max = 29146 (-126.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:19:14.734 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29142, posNoise = 4, negNoise = 6
17-03-18 04:19:14.734 -07 000000610 INF: Z Motor: After move to -0.127526, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:14.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 04:19:14.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:14.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:14.734 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:14.734 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:14.734 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:19:14.734 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:19:14.734 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:19:14.734 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:14.734 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:19:14.734 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:19:14.734 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:19:14.734 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:19:14.744 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:19:14.744 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:19:14.744 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:19:14.744 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:19:14.754 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 04:19:14.754 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 04:19:14.754 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 04:19:14.754 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 04:19:14.754 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 28035 150\n [Camera]
17-03-18 04:19:14.924 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.016692,
17-03-18 04:19:14.954 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:19:15.374 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:19:15.374 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:19:15.374 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:15.374 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:15.374 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2373830416, 0x0, 391868352) start.
17-03-18 04:19:15.374 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:19:15.374 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:19:15.374 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:15.374 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:15.374 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 04:19:15.564 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28035 803
17-03-18 04:19:15.714 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:19:15.774 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2373830416, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 04:19:15.774 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 04:19:15.774 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:15.774 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 04:19:15.774 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 04:19:15.774 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:15.774 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:19:15.774 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 04:19:15.774 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:19:15.784 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-18 04:19:15.914 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:19:15.914 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:19:15.914 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:15.914 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:15.914 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 04:19:15.914 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:19:15.914 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:19:15.914 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:15.914 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:15.914 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 04:19:16.104 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1347
17-03-18 04:19:16.104 -07 000000625 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:19:16.104 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 28035 150' command took 2 ms to send, 1347 ms to get response, and 1354 ms overall
17-03-18 04:19:16.104 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 04:19:16.114 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 18 at Y-position 73.17578125, Z-Position -0.127537742246333. ------
17-03-18 04:19:16.114 -07 000000611 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:19:16.114 -07 000000512 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.13340 mm
17-03-18 04:19:16.114 -07 000000512 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:19:16.234 -07 000000608 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:19:16.234 -07 000000611 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 123 ms overall
17-03-18 04:19:16.234 -07 000000611 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:19:16.234 -07 000000479 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 04:19:16.234 -07 000000479 INF: Y Motor: Moving to 74.0226 mm, started at 73.1758 mm, delta = 0.8468 mm
17-03-18 04:19:16.234 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 29142, sync = True, waitForSettling = False)
17-03-18 04:19:16.234 -07 000000626 INF: Z Motor: Moving to -0.133404 mm, started at -0.127538 mm, distance = -5.87 um
17-03-18 04:19:16.244 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:16.244 -07 000000585 INF: FPGA: Recv YRDPOS 149865
17-03-18 04:19:16.254 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 04:19:16.254 -07 000000479 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:16.254 -07 000000626 INF: FPGA: Xmit ZDACW 29142\n [Z Motor]
17-03-18 04:19:16.254 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 04:19:16.254 -07 000000479 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:19:16.254 -07 000000479 INF: Y Motor: Moving 1354 steps-34
17-03-18 04:19:16.264 -07 000000626 INF: FPGA: 'ZDACW 29142' command took 0 ms to send, 0 ms to get response, and 21 ms overall
17-03-18 04:19:16.264 -07 000000479 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:19:16.274 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:16.274 -07 000000444 INF: FPGA: Recv ZDACR 29142
17-03-18 04:19:16.284 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 04:19:16.284 -07 000000626 INF: Z Motor: MoveAbsStepped took 42 ms (did NOT wait for settling yet))
17-03-18 04:19:16.314 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 04:19:16.314 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 04:19:16.314 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:16.324 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 04:19:16.324 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 04:19:16.324 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:16.324 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:19:16.324 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 04:19:16.324 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 412 ms.
17-03-18 04:19:16.334 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-18 04:19:16.444 -07 000000438 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:19:16.444 -07 000000611 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 200 ms to get response, and 202 ms overall
17-03-18 04:19:16.634 -07 000000437 INF: FPGA: Recv YMVTILE
17-03-18 04:19:16.634 -07 000000479 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-18 04:19:16.654 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:19:16.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:19:16.674 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:16.674 -07 000000625 INF: FPGA: Recv YRDPOS 151569
17-03-18 04:19:16.684 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:19:16.684 -07 000000479 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:16.684 -07 000000479 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 04:19:16.684 -07 000000479 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.847 mm, average velocity = 2.205 mm/sec
17-03-18 04:19:17.634 -07 000000479 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:17.634 -07 000000480 INF: FPGA: Recv YRDPOS 151569
17-03-18 04:19:17.644 -07 000000479 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:19:17.644 -07 000000479 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:17.664 -07 000000479 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:19:17.664 -07 000000479 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:19:17.664 -07 000000479 INF: Y Motor: Moved to 74.0083 after 1425 ms (table move)
17-03-18 04:19:17.664 -07 000000512 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133404 mm (DAC = 29142)
17-03-18 04:19:17.664 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:17.674 -07 000000585 INF: FPGA: Recv ZSGSRD 30065
17-03-18 04:19:17.674 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:19:17.674 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:17.674 -07 000000561 INF: FPGA: Recv ZSGSRD 30056
17-03-18 04:19:17.684 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 04:19:17.684 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:17.684 -07 000000438 INF: FPGA: Recv ZSGSRD 30053
17-03-18 04:19:17.694 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:17.694 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:17.694 -07 000000474 INF: FPGA: Recv ZSGSRD 30056
17-03-18 04:19:17.704 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:17.704 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:17.704 -07 000000437 INF: FPGA: Recv ZSGSRD 30057
17-03-18 04:19:17.714 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:17.714 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:17.714 -07 000000608 INF: FPGA: Recv ZSGSRD 30060
17-03-18 04:19:17.724 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:17.724 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:17.724 -07 000000590 INF: FPGA: Recv ZSGSRD 30054
17-03-18 04:19:17.734 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:17.734 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:17.734 -07 000000012 INF: FPGA: Recv ZSGSRD 30056
17-03-18 04:19:17.744 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:17.744 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:17.744 -07 000000480 INF: FPGA: Recv ZSGSRD 30053
17-03-18 04:19:17.754 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:17.754 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:17.754 -07 000000444 INF: FPGA: Recv ZSGSRD 30054
17-03-18 04:19:17.764 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:17.764 -07 000000512 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:17.764 -07 000000501 INF: FPGA: Recv ZPIEZORD 25799
17-03-18 04:19:17.774 -07 000000512 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:17.774 -07 000000512 INF: Z Motor: Piezo is near 35.1 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.447 V. Piezo Error = -9.4 V.
17-03-18 04:19:17.774 -07 000000512 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.4 um, Read 10 ADC samples: Avg = 30056 (-132.6 uncal um), Error = 0.8 uncal um, Median = 30056 (-132.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30053 (-132.6 uncal um), Max = 30065 (-132.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 04:19:17.774 -07 000000512 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30056, posNoise = 9, negNoise = 3
17-03-18 04:19:17.774 -07 000000512 INF: Z Motor: After move to -0.133404, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:17.774 -07 000000512 INF: Z Motor: Settle wait time = 1428 ms, measure time = 104 ms (allowed 150 ms), total time = 1532 ms
17-03-18 04:19:17.774 -07 000000512 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 04:19:17.824 -07 000000512 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1706 ms
17-03-18 04:19:17.824 -07 000000512 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:19:17.824 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:17.824 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:17.824 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:17.834 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:17.834 -07 000000437 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:19:17.834 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:17.834 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:19:17.834 -07 000000437 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:19:17.834 -07 000000437 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:19:17.834 -07 000000437 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:19:17.844 -07 000000437 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 04:19:17.844 -07 000000437 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-18 04:19:17.844 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:19:17.884 -07 000000625 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:19:18.184 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:19:18.184 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:19:18.184 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:19:18.194 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-18 04:19:18.224 -07 000000611 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:19:18.224 -07 000000437 INF: FPGA: Recv CAMSNAP
17-03-18 04:19:18.224 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall
17-03-18 04:19:18.304 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 116 ms.
17-03-18 04:19:18.304 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:18.304 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 04:19:18.304 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-18 04:19:18.324 -07 000000444 INF: Autofocus start
17-03-18 04:19:18.324 -07 000000444 INF: MeasureProfile start
17-03-18 04:19:18.324 -07 000000585 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:19:18.334 -07 000000437 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:19:18.334 -07 000000585 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 5 ms overall
17-03-18 04:19:18.334 -07 000000585 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:19:18.334 -07 000000444 INF: MeasureProfile done
17-03-18 04:19:18.334 -07 000000444 INF: X=112  Z correction [um]=0.5148152
17-03-18 04:19:18.334 -07 000000444 INF: Autofocus finished
17-03-18 04:19:18.534 -07 000000479 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:19:18.534 -07 000000585 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 196 ms to get response, and 202 ms overall
17-03-18 04:19:18.544 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.133409472143902. ----------
17-03-18 04:19:18.544 -07 000000610 INF: Cycle	123	Tile	18	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:19:18.544 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27767, sync = True, waitForSettling = True)
17-03-18 04:19:18.544 -07 000000610 INF: Z Motor: Moving to -0.127109 mm, started at -0.133409 mm, distance = 6.30 um
17-03-18 04:19:18.544 -07 000000610 INF: FPGA: Xmit ZDACW 27767\n [Z Motor]
17-03-18 04:19:18.544 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 04:19:18.554 -07 000000610 INF: FPGA: 'ZDACW 27767' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 04:19:18.554 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:18.554 -07 000000438 INF: FPGA: Recv ZDACR 27767
17-03-18 04:19:18.564 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:18.564 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:19:18.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:18.714 -07 000000590 INF: FPGA: Recv ZSGSRD 29074
17-03-18 04:19:18.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:19:18.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:18.724 -07 000000579 INF: FPGA: Recv ZSGSRD 29075
17-03-18 04:19:18.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:18.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:18.734 -07 000000585 INF: FPGA: Recv ZSGSRD 29078
17-03-18 04:19:18.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:18.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:18.744 -07 000000438 INF: FPGA: Recv ZSGSRD 29070
17-03-18 04:19:18.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:18.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:18.754 -07 000000455 INF: FPGA: Recv ZSGSRD 29084
17-03-18 04:19:18.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:18.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:18.764 -07 000000501 INF: FPGA: Recv ZSGSRD 29081
17-03-18 04:19:18.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:18.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:18.774 -07 000000579 INF: FPGA: Recv ZSGSRD 29075
17-03-18 04:19:18.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:18.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:18.784 -07 000000611 INF: FPGA: Recv ZSGSRD 29074
17-03-18 04:19:18.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:18.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:18.794 -07 000000444 INF: FPGA: Recv ZSGSRD 29071
17-03-18 04:19:18.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:18.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:18.804 -07 000000561 INF: FPGA: Recv ZSGSRD 29078
17-03-18 04:19:18.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:18.814 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:18.814 -07 000000437 INF: FPGA: Recv ZPIEZORD 24468
17-03-18 04:19:18.824 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:18.824 -07 000000610 INF: Z Motor: Piezo is near 32.3 V (nominally 0 to 100 V), expect near 42.4 V, since DAC is at 4.237 V. Piezo Error = -10.1 V.
17-03-18 04:19:18.824 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.1 um, Read 10 ADC samples: Avg = 29076 (-126.3 uncal um), Error = 0.8 uncal um, Median = 29075 (-126.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29070 (-126.3 uncal um), Max = 29084 (-126.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 04:19:18.824 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29076, posNoise = 8, negNoise = 6
17-03-18 04:19:18.824 -07 000000610 INF: Z Motor: After move to -0.127109, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:18.824 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 04:19:18.824 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:18.824 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:18.824 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:18.824 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:19:18.824 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:18.824 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:18.824 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:19:18.824 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:19:18.824 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:19:18.824 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:19:18.824 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:19:18.824 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:19:18.834 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 04:19:18.834 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:19:18.834 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 04:19:18.834 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:19:18.844 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 04:19:18.844 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 04:19:18.844 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 04:19:18.844 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 04:19:18.844 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 27944 150\n [Camera]
17-03-18 04:19:19.044 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:19:19.464 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:19:19.464 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:19:19.464 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:19.464 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:19:19.464 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:19:19.464 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:19.464 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:19.464 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) start.
17-03-18 04:19:19.474 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:19.474 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 04:19:19.654 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27944 803
17-03-18 04:19:19.804 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:19:19.854 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 1111624864, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 04:19:19.854 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 04:19:19.854 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:19.854 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 04:19:19.854 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 04:19:19.854 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:19.854 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:19.854 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 04:19:19.854 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:19.864 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 04:19:20.004 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:19:20.004 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:19:20.004 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:20.004 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:19:20.004 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:19:20.004 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:20.014 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:20.014 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 04:19:20.014 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:20.014 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 04:19:20.194 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:19:20.194 -07 000000474 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:19:20.194 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 27944 150' command took 2 ms to send, 1347 ms to get response, and 1353 ms overall
17-03-18 04:19:20.194 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 04:19:20.194 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.00830078125, Z-Position -0.127113744244977. ------
17-03-18 04:19:20.204 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:19:20.204 -07 000000480 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.13343 mm
17-03-18 04:19:20.204 -07 000000480 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 04:19:20.324 -07 000000012 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:19:20.324 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 125 ms overall
17-03-18 04:19:20.334 -07 000000474 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 04:19:20.334 -07 000000474 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 04:19:20.334 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:20.334 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 29148, sync = True, waitForSettling = False)
17-03-18 04:19:20.334 -07 000000618 INF: Z Motor: Moving to -0.133431 mm, started at -0.127114 mm, distance = -6.32 um
17-03-18 04:19:20.334 -07 000000611 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.046637,
17-03-18 04:19:20.334 -07 000000590 INF: FPGA: Recv YRDPOS 151569
17-03-18 04:19:20.344 -07 000000618 INF: FPGA: Xmit ZDACW 29148\n [Z Motor]
17-03-18 04:19:20.344 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:20.344 -07 000000474 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:20.344 -07 000000474 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 04:19:20.344 -07 000000474 INF: Y Motor: Moving 1351 steps-29
17-03-18 04:19:20.344 -07 000000479 INF: FPGA: Recv ZDACW
17-03-18 04:19:20.354 -07 000000444 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 04:19:20.354 -07 000000618 INF: FPGA: 'ZDACW 29148' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 04:19:20.374 -07 000000474 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 04:19:20.384 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:20.384 -07 000000437 INF: FPGA: Recv ZDACR 29148
17-03-18 04:19:20.394 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 39 ms overall
17-03-18 04:19:20.394 -07 000000618 INF: Z Motor: MoveAbsStepped took 59 ms (did NOT wait for settling yet))
17-03-18 04:19:20.414 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 04:19:20.414 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 04:19:20.414 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:20.414 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 04:19:20.414 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 04:19:20.414 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:20.424 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:20.424 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:20.424 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 416 ms.
17-03-18 04:19:20.424 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 420 ms.
17-03-18 04:19:20.554 -07 000000618 INF: FPGA: Recv FOCMRRFOC
17-03-18 04:19:20.554 -07 000000444 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 223 ms overall
17-03-18 04:19:20.744 -07 000000479 INF: FPGA: Recv YMVTILE
17-03-18 04:19:20.744 -07 000000474 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 407 ms overall
17-03-18 04:19:20.774 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:20.784 -07 000000512 INF: FPGA: Recv YRDPOS 153256
17-03-18 04:19:20.784 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 04:19:20.784 -07 000000474 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:20.784 -07 000000474 INF: Y Motor: Position error before settling (table move) = -42 encoder counts (-0.021 mm)
17-03-18 04:19:20.784 -07 000000474 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 407 ms, distance = 0.844 mm, average velocity = 2.074 mm/sec
17-03-18 04:19:21.654 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 04:19:21.654 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 122. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1734, R2=1802, Total=3536. Warn if over 250 bubbles per interval.
17-03-18 04:19:21.734 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 04:19:21.734 -07 000000012 INF: FPGA: Recv YRDPOS 153256
17-03-18 04:19:21.744 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:19:21.744 -07 000000474 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 04:19:21.764 -07 000000474 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 04:19:21.764 -07 000000474 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 04:19:21.764 -07 000000474 INF: Y Motor: Moved to 74.8320 after 1430 ms (table move)
17-03-18 04:19:21.764 -07 000000480 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133431 mm (DAC = 29148)
17-03-18 04:19:21.764 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:21.764 -07 000000561 INF: FPGA: Recv ZSGSRD 30060
17-03-18 04:19:21.774 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:19:21.774 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:21.774 -07 000000474 INF: FPGA: Recv ZSGSRD 30058
17-03-18 04:19:21.784 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:21.784 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:21.784 -07 000000618 INF: FPGA: Recv ZSGSRD 30060
17-03-18 04:19:21.794 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:21.794 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:21.794 -07 000000608 INF: FPGA: Recv ZSGSRD 30058
17-03-18 04:19:21.804 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:21.804 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:21.804 -07 000000438 INF: FPGA: Recv ZSGSRD 30057
17-03-18 04:19:21.814 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:21.814 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:21.814 -07 000000444 INF: FPGA: Recv ZSGSRD 30070
17-03-18 04:19:21.824 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:21.824 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:21.824 -07 000000474 INF: FPGA: Recv ZSGSRD 30060
17-03-18 04:19:21.834 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:21.834 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:21.834 -07 000000611 INF: FPGA: Recv ZSGSRD 30060
17-03-18 04:19:21.844 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:21.844 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:21.844 -07 000000608 INF: FPGA: Recv ZSGSRD 30058
17-03-18 04:19:21.854 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:21.854 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:21.854 -07 000000438 INF: FPGA: Recv ZSGSRD 30051
17-03-18 04:19:21.864 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:21.864 -07 000000480 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:21.864 -07 000000512 INF: FPGA: Recv ZPIEZORD 25795
17-03-18 04:19:21.874 -07 000000480 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:21.874 -07 000000480 INF: Z Motor: Piezo is near 35.1 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.448 V. Piezo Error = -9.4 V.
17-03-18 04:19:21.874 -07 000000480 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.4 um, Read 10 ADC samples: Avg = 30059 (-132.6 uncal um), Error = 0.8 uncal um, Median = 30059 (-132.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 30051 (-132.6 uncal um), Max = 30070 (-132.7 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 04:19:21.874 -07 000000480 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30059, posNoise = 11, negNoise = 8
17-03-18 04:19:21.874 -07 000000480 INF: Z Motor: After move to -0.133431, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:21.874 -07 000000480 INF: Z Motor: Settle wait time = 1434 ms, measure time = 105 ms (allowed 150 ms), total time = 1539 ms
17-03-18 04:19:21.874 -07 000000480 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 04:19:21.924 -07 000000480 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1716 ms
17-03-18 04:19:21.924 -07 000000480 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 04:19:21.924 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:21.924 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:21.924 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:21.924 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:21.924 -07 000000474 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 04:19:21.924 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:21.924 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:19:21.924 -07 000000474 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 04:19:21.934 -07 000000474 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 04:19:21.934 -07 000000474 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 04:19:21.934 -07 000000474 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 8 ms.
17-03-18 04:19:21.934 -07 000000474 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms.
17-03-18 04:19:21.944 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 04:19:21.984 -07 000000608 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 04:19:22.284 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 04:19:22.284 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 04:19:22.294 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 04:19:22.294 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-18 04:19:22.324 -07 000000579 INF: FPGA: Recv @CAMSNAP 380
17-03-18 04:19:22.324 -07 000000447 INF: FPGA: Recv CAMSNAP
17-03-18 04:19:22.324 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 379 ms to get response, and 387 ms overall
17-03-18 04:19:22.404 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 114 ms.
17-03-18 04:19:22.404 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:22.404 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 04:19:22.404 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-18 04:19:22.424 -07 000000437 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 04:19:22.424 -07 000000561 INF: Autofocus start
17-03-18 04:19:22.424 -07 000000561 INF: MeasureProfile start
17-03-18 04:19:22.424 -07 000000479 INF: FPGA: Recv FOCMRRCUR 
17-03-18 04:19:22.434 -07 000000437 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 04:19:22.434 -07 000000437 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 04:19:22.444 -07 000000561 INF: MeasureProfile done
17-03-18 04:19:22.444 -07 000000561 INF: X=16  Z correction [um]=0.0530179
17-03-18 04:19:22.444 -07 000000561 INF: Autofocus finished
17-03-18 04:19:22.634 -07 000000590 INF: FPGA: Recv FOCMRRIMG
17-03-18 04:19:22.634 -07 000000437 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 204 ms overall
17-03-18 04:19:22.644 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.133428744780328. ----------
17-03-18 04:19:22.644 -07 000000610 INF: Cycle	123	Tile	19	Exposure Settings		A	418	G	201	T	201	C	418
17-03-18 04:19:22.644 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27672, sync = True, waitForSettling = True)
17-03-18 04:19:22.644 -07 000000610 INF: Z Motor: Moving to -0.126674 mm, started at -0.133429 mm, distance = 6.75 um
17-03-18 04:19:22.644 -07 000000610 INF: FPGA: Xmit ZDACW 27672\n [Z Motor]
17-03-18 04:19:22.644 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 04:19:22.654 -07 000000610 INF: FPGA: 'ZDACW 27672' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 04:19:22.654 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 04:19:22.654 -07 000000579 INF: FPGA: Recv ZDACR 27672
17-03-18 04:19:22.664 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:22.664 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 04:19:22.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:22.814 -07 000000474 INF: FPGA: Recv ZSGSRD 29009
17-03-18 04:19:22.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 04:19:22.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:22.824 -07 000000012 INF: FPGA: Recv ZSGSRD 29011
17-03-18 04:19:22.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:22.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:22.834 -07 000000438 INF: FPGA: Recv ZSGSRD 29005
17-03-18 04:19:22.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:22.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:22.844 -07 000000561 INF: FPGA: Recv ZSGSRD 29005
17-03-18 04:19:22.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:22.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:22.854 -07 000000447 INF: FPGA: Recv ZSGSRD 29017
17-03-18 04:19:22.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:22.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:22.864 -07 000000512 INF: FPGA: Recv ZSGSRD 29007
17-03-18 04:19:22.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:22.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:22.874 -07 000000444 INF: FPGA: Recv ZSGSRD 29011
17-03-18 04:19:22.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:22.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:22.884 -07 000000437 INF: FPGA: Recv ZSGSRD 29011
17-03-18 04:19:22.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:22.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:22.894 -07 000000561 INF: FPGA: Recv ZSGSRD 29007
17-03-18 04:19:22.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:22.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 04:19:22.904 -07 000000447 INF: FPGA: Recv ZSGSRD 29007
17-03-18 04:19:22.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:22.914 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 04:19:22.914 -07 000000474 INF: FPGA: Recv ZPIEZORD 24396
17-03-18 04:19:22.924 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 04:19:22.924 -07 000000610 INF: Z Motor: Piezo is near 32.1 V (nominally 0 to 100 V), expect near 42.2 V, since DAC is at 4.222 V. Piezo Error = -10.1 V.
17-03-18 04:19:22.924 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.7 um, Read 10 ADC samples: Avg = 29009 (-125.9 uncal um), Error = 0.8 uncal um, Median = 29008 (-125.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29005 (-125.9 uncal um), Max = 29017 (-126.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 04:19:22.924 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29009, posNoise = 8, negNoise = 4
17-03-18 04:19:22.924 -07 000000610 INF: Z Motor: After move to -0.126674, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 04:19:22.924 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 04:19:22.924 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 04:19:22.924 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 04:19:22.924 -07 000000479 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 04:19:22.924 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 04:19:22.924 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 04:19:22.924 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 04:19:22.924 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 04:19:22.924 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 04:19:22.924 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 04:19:22.924 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 04:19:22.924 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 04:19:22.924 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 04:19:22.934 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 04:19:22.934 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 04:19:22.934 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 04:19:22.934 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 04:19:22.944 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 04:19:22.944 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 04:19:22.944 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 04:19:22.944 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 04:19:22.944 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 418 418 201 201 27849 150\n [Camera]
17-03-18 04:19:23.144 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 04:19:23.564 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 610
17-03-18 04:19:23.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 610
17-03-18 04:19:23.564 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:23.564 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:23.564 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 04:19:23.564 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 610
17-03-18 04:19:23.564 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 610
17-03-18 04:19:23.564 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:23.564 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:23.564 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) start.
17-03-18 04:19:23.754 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27849 803
17-03-18 04:19:23.904 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 953
17-03-18 04:19:23.964 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 04:19:23.964 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 04:19:23.964 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:23.964 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2298580584, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 04:19:23.964 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 04:19:23.964 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:23.964 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 04:19:23.964 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 04:19:23.974 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:19:23.974 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 04:19:24.104 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1154
17-03-18 04:19:24.104 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1154
17-03-18 04:19:24.104 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 04:19:24.104 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 04:19:24.104 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) start.
17-03-18 04:19:24.104 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1154
17-03-18 04:19:24.104 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1154
17-03-18 04:19:24.114 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 04:19:24.114 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 04:19:24.114 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) start.
17-03-18 04:19:24.294 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1346
17-03-18 04:19:24.294 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 04:19:24.294 -07 000000610 INF: FPGA: 'CAMDBLSNAP 418 418 201 201 27849 150' command took 2 ms to send, 1348 ms to get response, and 1353 ms overall
17-03-18 04:19:24.494 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 04:19:24.494 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 04:19:24.494 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:24.494 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 04:19:24.494 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 04:19:24.494 -07 000000474 INF: Camera: CopyActivePixFullImage start.
17-03-18 04:19:24.494 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 04:19:24.504 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 04:19:24.504 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 04:19:24.504 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 04:19:24.504 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 04:19:24.544 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 04:19:24.544 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 04:19:24.584 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms.
17-03-18 04:19:24.604 -07 000000610 INF: Enabling Skipping AutoFocus in the next 5 cycles.
17-03-18 04:19:24.604 -07 000000610 INF: Imaging Cycle 123: ScanTilesCommand Cycle 123 time end. Duration was 145824 ms.
17-03-18 04:19:24.604 -07 000000610 INF: =================== Cycle #123 ===================
17-03-18 04:19:24.604 -07 000000610 INF: ===================  ===================
17-03-18 04:19:24.604 -07 000000437 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 04:19:24.604 -07 000000579 INF: FPGA: Recv EXLED1ADCR 22
17-03-18 04:19:24.614 -07 000000437 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 04:19:24.614 -07 000000437 INF: GreenLED: Using Green data: Photodiode ADC 22 --> 0.0 mW (old method), or 1.6 mW (new method). Difference = 1.6 mW
17-03-18 04:19:24.614 -07 000000437 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 123, FrontChillerTemperature: 4.046637, FrontChillerHeatSinkTemperature: 0.550775, AmbientTemperature: 18.63913, FlowCellCompartmentTemperature: 22.00126, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.46851, GreenLEDSensorTemperature: 26.0939, PhotodiodePowerAdcGreen: 22, PhotodiodePowerMwGreen: 1.562308
17-03-18 04:19:24.714 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.