17-03-18 06:43:34.104 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:43:34.104 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True) 17-03-18 06:43:34.104 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8311 mm, delta = 0.5495 mm 17-03-18 06:43:34.114 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:43:34.114 -07 000000424 INF: FPGA: Recv YRDPOS 153255 17-03-18 06:43:34.124 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 06:43:34.124 -07 000000610 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:43:34.124 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False 17-03-18 06:43:34.124 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts 17-03-18 06:43:34.144 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor] 17-03-18 06:43:34.264 -07 000000430 INF: FPGA: Recv YMVTO 154377 872 17-03-18 06:43:34.264 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 113 ms to get response, and 116 ms overall 17-03-18 06:43:34.264 -07 000000610 INF: Y Motor: Position error before settling = -2 encoder counts (-0.001 mm) 17-03-18 06:43:34.264 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.550 mm) should take 878 steps, but required 872 steps (0.545 mm). Slippage = -0.004 mm (-0.01%). 17-03-18 06:43:34.264 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 116 ms, distance = 0.550 mm, average velocity = 4.737 mm/sec 17-03-18 06:43:36.884 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:43:36.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2000, R2=2082, Total=4082. Warn if over 250 bubbles per interval. 17-03-18 06:43:37.264 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:43:37.264 -07 000000487 INF: FPGA: Recv YRDPOS 154378 17-03-18 06:43:37.274 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:43:37.274 -07 000000610 INF: Y Motor: Encoder = 154378 = motor step 120607.8 = 75.3799 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:43:37.294 -07 000000610 INF: Y Motor: After move to 75.380580, error = -0.000697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:43:37.294 -07 000000610 INF: Y Motor: Position error after settling = -1 encoder counts (0.000 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 06:43:37.294 -07 000000610 INF: Y Motor: Moved to 75.3799 after 3187 ms 17-03-18 06:43:37.304 -07 000000610 INF: =================== Cycle #153, Flow Cell Temp 60° =================== 17-03-18 06:43:37.304 -07 000000610 INF: =================== Cycle #153, Flow Cell Temp 60°, FC temperature to 60° =================== 17-03-18 06:43:37.304 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl] 17-03-18 06:43:37.304 -07 000000461 INF: FPGA: Recv TEC2TEMP 17-03-18 06:43:37.314 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:43:37.314 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-18 06:43:37.314 -07 000000474 INF: FPGA: Recv TEC2EN 17-03-18 06:43:37.324 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:43:37.324 -07 000000610 INF: =================== Cycle #153, Flow Cell Temp 60° =================== 17-03-18 06:43:37.324 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:43:37.324 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 06:43:37.324 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:43:37.344 -07 000000610 INF: ReagentValve: Recv 18\r 17-03-18 06:43:37.344 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions. 17-03-18 06:43:37.344 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-18 06:43:37.644 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 06:43:37.664 -07 000000610 INF: ReagentValve: Recv 0278\r 17-03-18 06:43:37.664 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%) 17-03-18 06:43:37.714 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:43:37.734 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 06:43:37.734 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 06:43:37.834 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:43:37.834 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1 17-03-18 06:43:37.834 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:43:37.864 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-18 06:43:37.864 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-18 06:43:37.864 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 06:43:37.994 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r 17-03-18 06:43:38.034 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:43:39.494 -07 000000012 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.979922, 17-03-18 06:43:41.164 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:43:41.194 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:43:41.614 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:43:41.644 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:43:41.884 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:43:41.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2000, R2=2082, Total=4082. Warn if over 250 bubbles per interval. 17-03-18 06:43:42.064 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:43:42.094 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:43:42.094 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete 17-03-18 06:43:42.094 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:43:42.224 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:43:42.254 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 06:43:42.254 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 06:43:42.384 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:43:42.414 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 06:43:42.414 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 06:43:42.414 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 06:43:42.544 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 06:43:42.574 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:43:43.004 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:43:43.034 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:43:43.034 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 06:43:43.034 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:43:44.254 -07 000000610 INF: AsyncDelayTimer waited 1219ms 17-03-18 06:43:44.254 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start 17-03-18 06:43:44.254 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:43:44.274 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 06:43:44.274 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions. 17-03-18 06:43:44.274 -07 000000610 INF: ReagentValve: Xmit +04\r 17-03-18 06:43:44.414 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 06:43:44.434 -07 000000610 INF: ReagentValve: Recv 00CD\r 17-03-18 06:43:44.434 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%) 17-03-18 06:43:44.484 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:43:44.504 -07 000000610 INF: ReagentValve: Recv 04\r 17-03-18 06:43:44.504 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 06:43:44.604 -07 000000610 INF: =================== Cycle #153, Pumping Reagent CMS (4) =================== 17-03-18 06:43:44.604 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-18 06:43:44.604 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:43:44.634 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 06:43:44.634 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 06:43:44.634 -07 000000610 INF: =================== Cycle #153, Pumping Reagent CMS (4), Aspirating port InputPort =================== 17-03-18 06:43:44.764 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-18 06:43:44.804 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:43:44.864 -07 000000474 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.988112, 17-03-18 06:43:46.244 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:43:46.274 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:43:46.694 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:43:46.724 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:43:46.724 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete 17-03-18 06:43:46.724 -07 000000610 INF: =================== Cycle #153, Pumping Reagent CMS (4) =================== 17-03-18 06:43:46.854 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:43:46.884 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 06:43:46.884 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 06:43:46.884 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:43:46.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2000, R2=2082, Total=4082. Warn if over 250 bubbles per interval. 17-03-18 06:43:47.014 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:43:47.044 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 06:43:47.044 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 06:43:47.044 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 06:43:47.174 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 06:43:47.204 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:43:47.634 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:43:47.664 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:43:47.664 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 06:43:47.664 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:43:48.884 -07 000000610 INF: AsyncDelayTimer waited 1218ms 17-03-18 06:43:48.884 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 06:43:48.884 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:43:48.904 -07 000000610 INF: ReagentValve: Recv 04\r 17-03-18 06:43:48.904 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions. 17-03-18 06:43:48.904 -07 000000610 INF: ReagentValve: Xmit -03\r 17-03-18 06:43:49.054 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 06:43:49.074 -07 000000610 INF: ReagentValve: Recv 00E1\r 17-03-18 06:43:49.074 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%) 17-03-18 06:43:49.124 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:43:49.144 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 06:43:49.144 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 06:43:49.244 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:43:49.244 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-18 06:43:49.244 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:43:49.274 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 06:43:49.274 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 06:43:49.274 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 06:43:49.404 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-18 06:43:49.444 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:43:50.224 -07 000000474 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.042558, 17-03-18 06:43:50.314 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:43:50.354 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:43:50.354 -07 000000610 INF: LanePump: Waited 909 ms for pump motion to complete 17-03-18 06:43:50.354 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:43:50.484 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:43:50.514 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 06:43:50.514 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 06:43:50.644 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:43:50.674 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 06:43:50.674 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 06:43:50.674 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 06:43:50.804 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 06:43:50.834 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:43:51.264 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:43:51.294 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:43:51.294 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 06:43:51.294 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:43:51.294 -07 000000461 INF: WaitCommand(10000) start 17-03-18 06:43:51.294 -07 000000462 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 06:43:51.294 -07 000000462 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-18 06:43:51.884 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:43:51.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2000, R2=2082, Total=4082. Warn if over 250 bubbles per interval. 17-03-18 06:43:52.514 -07 000000462 INF: AsyncDelayTimer waited 1216ms 17-03-18 06:43:52.514 -07 000000462 INF: LanePump: Xmit /1?\r 17-03-18 06:43:52.544 -07 000000462 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 06:43:52.544 -07 000000462 INF: LanePump: Current Position of Pump is: 1110 17-03-18 06:43:52.674 -07 000000462 INF: LanePump: Xmit /1V1500OA0R\r 17-03-18 06:43:52.714 -07 000000462 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:43:54.244 -07 000000462 INF: LanePump: Xmit /1Q\r 17-03-18 06:43:54.274 -07 000000462 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:43:54.694 -07 000000462 INF: LanePump: Xmit /1Q\r 17-03-18 06:43:54.724 -07 000000462 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:43:54.724 -07 000000462 INF: LanePump: Waited 2010 ms for pump motion to complete 17-03-18 06:43:54.724 -07 000000462 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 06:43:54.724 -07 000000462 INF: =================== =================== 17-03-18 06:43:55.604 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.037119, 17-03-18 06:43:56.884 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:43:56.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2000, R2=2082, Total=4082. Warn if over 250 bubbles per interval. 17-03-18 06:44:00.974 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.012614, 17-03-18 06:44:01.304 -07 000000461 INF: WaitCommand(10000) end 17-03-18 06:44:01.304 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:44:01.304 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1 17-03-18 06:44:01.304 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:01.334 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-18 06:44:01.334 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-18 06:44:01.334 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 06:44:01.464 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r 17-03-18 06:44:01.504 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:44:01.884 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:44:01.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2000, R2=2082, Total=4082. Warn if over 250 bubbles per interval. 17-03-18 06:44:06.334 -07 000000585 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.993549, 17-03-18 06:44:06.884 -07 000000581 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1 17-03-18 06:44:06.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2001, R2=2083, Total=4084. Warn if over 250 bubbles per interval. 17-03-18 06:44:07.634 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:07.664 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:44:08.084 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:08.114 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:44:08.534 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:08.564 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:44:08.984 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:09.014 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:44:09.434 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:09.464 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:09.464 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete 17-03-18 06:44:09.464 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:44:09.594 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:09.624 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-18 06:44:09.624 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-18 06:44:09.754 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:09.784 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-18 06:44:09.784 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-18 06:44:09.784 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 06:44:09.914 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 06:44:09.944 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:10.374 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:10.404 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:10.404 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 06:44:10.404 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:44:11.624 -07 000000610 INF: AsyncDelayTimer waited 1218ms 17-03-18 06:44:11.624 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start 17-03-18 06:44:11.624 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:44:11.644 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 06:44:11.644 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions. 17-03-18 06:44:11.644 -07 000000610 INF: ReagentValve: Xmit -01\r 17-03-18 06:44:11.704 -07 000000585 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.983999, 17-03-18 06:44:11.854 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 06:44:11.874 -07 000000610 INF: ReagentValve: Recv 0198\r 17-03-18 06:44:11.874 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%) 17-03-18 06:44:11.884 -07 000000474 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1 17-03-18 06:44:11.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:44:11.924 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:44:11.944 -07 000000610 INF: ReagentValve: Recv 01\r 17-03-18 06:44:11.944 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 06:44:12.044 -07 000000610 INF: =================== Cycle #153, Pumping Reagent IMT (1) =================== 17-03-18 06:44:12.044 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-18 06:44:12.044 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:12.074 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-18 06:44:12.074 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-18 06:44:12.074 -07 000000610 INF: =================== Cycle #153, Pumping Reagent IMT (1), Aspirating port InputPort =================== 17-03-18 06:44:12.204 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-18 06:44:12.244 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:44:13.684 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:13.714 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:44:14.134 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:14.164 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:14.164 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete 17-03-18 06:44:14.164 -07 000000610 INF: =================== Cycle #153, Pumping Reagent IMT (1) =================== 17-03-18 06:44:14.294 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:14.324 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-18 06:44:14.324 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-18 06:44:14.454 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:14.484 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-18 06:44:14.484 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-18 06:44:14.484 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 06:44:14.614 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 06:44:14.644 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:15.074 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:15.104 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:15.104 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 06:44:15.104 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:44:16.324 -07 000000610 INF: AsyncDelayTimer waited 1220ms 17-03-18 06:44:16.324 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 06:44:16.324 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:44:16.344 -07 000000610 INF: ReagentValve: Recv 01\r 17-03-18 06:44:16.344 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions. 17-03-18 06:44:16.344 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-18 06:44:16.574 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 06:44:16.594 -07 000000610 INF: ReagentValve: Recv 01AC\r 17-03-18 06:44:16.594 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%) 17-03-18 06:44:16.644 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:44:16.664 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 06:44:16.664 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 06:44:16.764 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:44:16.764 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-18 06:44:16.764 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:16.794 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-18 06:44:16.794 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-18 06:44:16.794 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 06:44:16.884 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:44:16.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:44:16.924 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-18 06:44:16.964 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:44:17.074 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.985358, 17-03-18 06:44:17.834 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:17.864 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:17.864 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete 17-03-18 06:44:17.864 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:44:17.994 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:18.024 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-18 06:44:18.024 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-18 06:44:18.154 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:18.184 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-18 06:44:18.184 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-18 06:44:18.184 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 06:44:18.314 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 06:44:18.344 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:18.774 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:18.804 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:18.804 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 06:44:18.804 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:44:18.804 -07 000000610 INF: =================== Cycle #153, Flow Cell Temp 65° =================== 17-03-18 06:44:18.804 -07 000000610 INF: =================== Cycle #153, Flow Cell Temp 65°, FC temperature to 65° =================== 17-03-18 06:44:18.804 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl] 17-03-18 06:44:18.804 -07 000000474 INF: FPGA: Recv TEC2TEMP 17-03-18 06:44:18.814 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:44:18.814 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-18 06:44:18.814 -07 000000461 INF: FPGA: Recv TEC2EN 17-03-18 06:44:18.824 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:44:18.824 -07 000000610 INF: =================== Cycle #153, Flow Cell Temp 65° =================== 17-03-18 06:44:18.824 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:44:18.824 -07 000000610 INF: WaitCommand(30000) start 17-03-18 06:44:21.884 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:44:21.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:44:22.444 -07 000000474 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.986717, 17-03-18 06:44:26.884 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:44:26.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:44:27.814 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.98264, 17-03-18 06:44:31.884 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:44:31.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:44:33.184 -07 000000581 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.003063, 17-03-18 06:44:36.884 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:44:36.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:44:38.554 -07 000000625 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.000345, 17-03-18 06:44:41.884 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:44:41.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:44:43.924 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.999021, 17-03-18 06:44:46.884 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:44:46.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:44:48.834 -07 000000610 INF: WaitCommand(30000) end 17-03-18 06:44:48.834 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:44:48.834 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1 17-03-18 06:44:48.934 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:48.964 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-18 06:44:48.964 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-18 06:44:48.964 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 06:44:49.094 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r 17-03-18 06:44:49.134 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:44:49.294 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.014009, 17-03-18 06:44:49.674 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:49.704 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:49.704 -07 000000610 INF: LanePump: Waited 570 ms for pump motion to complete 17-03-18 06:44:49.704 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:44:49.834 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:49.864 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-18 06:44:49.864 -07 000000610 INF: LanePump: Current Position of Pump is: 1920 17-03-18 06:44:49.994 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:44:50.024 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-18 06:44:50.024 -07 000000610 INF: LanePump: Current Position of Pump is: 1920 17-03-18 06:44:50.024 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 06:44:50.154 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 06:44:50.184 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:50.614 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:50.644 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:50.644 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 06:44:50.644 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:44:50.644 -07 000000608 INF: WaitCommand(30000) start 17-03-18 06:44:50.644 -07 000000581 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 06:44:50.644 -07 000000581 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-18 06:44:51.864 -07 000000581 INF: AsyncDelayTimer waited 1214ms 17-03-18 06:44:51.864 -07 000000581 INF: LanePump: Xmit /1?\r 17-03-18 06:44:51.884 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:44:51.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:44:51.894 -07 000000581 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-18 06:44:51.894 -07 000000581 INF: LanePump: Current Position of Pump is: 1920 17-03-18 06:44:52.024 -07 000000581 INF: LanePump: Xmit /1V1500OA0R\r 17-03-18 06:44:52.064 -07 000000581 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:44:54.404 -07 000000581 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:54.434 -07 000000581 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:44:54.664 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.98264, 17-03-18 06:44:54.854 -07 000000581 INF: LanePump: Xmit /1Q\r 17-03-18 06:44:54.884 -07 000000581 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:44:54.884 -07 000000581 INF: LanePump: Waited 2819 ms for pump motion to complete 17-03-18 06:44:54.884 -07 000000581 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 06:44:54.884 -07 000000581 INF: =================== =================== 17-03-18 06:44:56.884 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:44:56.884 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:45:00.034 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.986717, 17-03-18 06:45:01.884 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:45:01.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:45:05.404 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.985358, 17-03-18 06:45:06.884 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:45:06.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:45:10.774 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.000345, 17-03-18 06:45:11.884 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:45:11.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:45:16.144 -07 000000474 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.011254, 17-03-18 06:45:16.894 -07 000000581 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:45:16.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:45:20.654 -07 000000608 INF: WaitCommand(30000) end 17-03-18 06:45:20.654 -07 000000610 INF: =================== Cycle #153, Flow Cell Temp 22° =================== 17-03-18 06:45:20.654 -07 000000610 INF: =================== Cycle #153, Flow Cell Temp 22°, FC temperature to 22° =================== 17-03-18 06:45:20.654 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl] 17-03-18 06:45:20.654 -07 000000461 INF: FPGA: Recv TEC2TEMP 17-03-18 06:45:20.664 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:45:20.664 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-18 06:45:20.664 -07 000000512 INF: FPGA: Recv TEC2EN 17-03-18 06:45:20.674 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:20.674 -07 000000610 INF: =================== Cycle #153, Flow Cell Temp 22° =================== 17-03-18 06:45:20.674 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:45:20.674 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:45:20.674 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1 17-03-18 06:45:20.674 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:45:20.714 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-18 06:45:20.714 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-18 06:45:20.714 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 06:45:20.844 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r 17-03-18 06:45:20.884 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:45:21.514 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.011254, 17-03-18 06:45:21.894 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:45:21.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2002, R2=2084, Total=4086. Warn if over 250 bubbles per interval. 17-03-18 06:45:24.014 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:45:24.044 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:45:24.464 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:45:24.494 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:45:24.914 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:45:24.944 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:45:24.944 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete 17-03-18 06:45:24.944 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:45:25.074 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:45:25.104 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 06:45:25.104 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 06:45:25.234 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:45:25.264 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 06:45:25.264 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 06:45:25.264 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 06:45:25.394 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 06:45:25.424 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:45:25.854 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:45:25.884 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:45:25.884 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 06:45:25.884 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:45:26.884 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.004458, 17-03-18 06:45:26.894 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 1 17-03-18 06:45:26.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=1, R2=2, Total=3. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2086, Total=4089. Warn if over 250 bubbles per interval. 17-03-18 06:45:27.104 -07 000000610 INF: AsyncDelayTimer waited 1218ms 17-03-18 06:45:27.104 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start 17-03-18 06:45:27.104 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:45:27.124 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 06:45:27.124 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions. 17-03-18 06:45:27.124 -07 000000610 INF: ReagentValve: Xmit -02\r 17-03-18 06:45:27.274 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 06:45:27.294 -07 000000610 INF: ReagentValve: Recv 00E3\r 17-03-18 06:45:27.294 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%) 17-03-18 06:45:27.344 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:45:27.364 -07 000000610 INF: ReagentValve: Recv 02\r 17-03-18 06:45:27.364 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 06:45:27.464 -07 000000610 INF: =================== Cycle #153, Pumping Reagent USM (2) =================== 17-03-18 06:45:27.464 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-18 06:45:27.464 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:45:27.494 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 06:45:27.494 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 06:45:27.494 -07 000000610 INF: =================== Cycle #153, Pumping Reagent USM (2), Aspirating port InputPort =================== 17-03-18 06:45:27.624 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-18 06:45:27.664 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:45:29.104 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:45:29.134 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:45:29.554 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:45:29.584 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:45:29.584 -07 000000610 INF: LanePump: Waited 1920 ms for pump motion to complete 17-03-18 06:45:29.584 -07 000000610 INF: =================== Cycle #153, Pumping Reagent USM (2) =================== 17-03-18 06:45:29.714 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:45:29.744 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 06:45:29.744 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 06:45:29.874 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:45:29.904 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 06:45:29.904 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 06:45:29.904 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 06:45:30.034 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 06:45:30.064 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:45:30.494 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:45:30.524 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:45:30.524 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 06:45:30.524 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:45:31.744 -07 000000610 INF: AsyncDelayTimer waited 1218ms 17-03-18 06:45:31.744 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 06:45:31.744 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:45:31.764 -07 000000610 INF: ReagentValve: Recv 02\r 17-03-18 06:45:31.764 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions. 17-03-18 06:45:31.764 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-18 06:45:31.894 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0 17-03-18 06:45:31.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:45:31.914 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 06:45:31.934 -07 000000610 INF: ReagentValve: Recv 00E3\r 17-03-18 06:45:31.934 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%) 17-03-18 06:45:31.984 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:45:32.004 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 06:45:32.004 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 06:45:32.104 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:45:32.104 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-18 06:45:32.104 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:45:32.134 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 06:45:32.134 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 06:45:32.134 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 06:45:32.254 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.016692, 17-03-18 06:45:32.264 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-18 06:45:32.304 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:45:33.174 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:45:33.204 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:45:33.204 -07 000000610 INF: LanePump: Waited 900 ms for pump motion to complete 17-03-18 06:45:33.204 -07 000000610 INF: =================== Cycle #153, Pumping Reagent PR2 (3) =================== 17-03-18 06:45:33.334 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:45:33.364 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 06:45:33.364 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 06:45:33.494 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 06:45:33.524 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 06:45:33.524 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 06:45:33.524 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 06:45:33.654 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 06:45:33.684 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:45:34.114 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 06:45:34.144 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:45:34.144 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 06:45:34.144 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:45:34.144 -07 000000512 INF: WaitCommand(10000) start 17-03-18 06:45:34.144 -07 000000487 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 06:45:34.144 -07 000000487 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-18 06:45:35.364 -07 000000487 INF: AsyncDelayTimer waited 1216ms 17-03-18 06:45:35.364 -07 000000487 INF: LanePump: Xmit /1?\r 17-03-18 06:45:35.394 -07 000000487 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 06:45:35.394 -07 000000487 INF: LanePump: Current Position of Pump is: 1110 17-03-18 06:45:35.524 -07 000000487 INF: LanePump: Xmit /1V1500OA0R\r 17-03-18 06:45:35.564 -07 000000487 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:45:36.894 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:45:36.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:45:37.094 -07 000000487 INF: LanePump: Xmit /1Q\r 17-03-18 06:45:37.124 -07 000000487 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 06:45:37.544 -07 000000487 INF: LanePump: Xmit /1Q\r 17-03-18 06:45:37.574 -07 000000487 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 06:45:37.574 -07 000000487 INF: LanePump: Waited 2009 ms for pump motion to complete 17-03-18 06:45:37.574 -07 000000487 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 06:45:37.574 -07 000000487 INF: =================== =================== 17-03-18 06:45:37.624 -07 000000581 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.020806, 17-03-18 06:45:41.894 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:45:41.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:45:42.994 -07 000000585 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.038479, 17-03-18 06:45:44.154 -07 000000512 INF: WaitCommand(10000) end 17-03-18 06:45:44.154 -07 000000610 INF: =================== Cycle #153, Imaging =================== 17-03-18 06:45:44.154 -07 000000610 INF: Imaging Cycle 153: ScanTilesCommand Cycle 153 time start. 17-03-18 06:45:44.154 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand 17-03-18 06:45:44.164 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:45:44.184 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 06:45:44.184 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions. 17-03-18 06:45:44.184 -07 000000610 INF: ReagentValve: Xmit -18\r 17-03-18 06:45:44.484 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 06:45:44.504 -07 000000610 INF: ReagentValve: Recv 0278\r 17-03-18 06:45:44.504 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%) 17-03-18 06:45:44.554 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 06:45:44.574 -07 000000610 INF: ReagentValve: Recv 18\r 17-03-18 06:45:44.574 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:45:44.574 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:45:44.574 -07 000000487 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start. 17-03-18 06:45:44.574 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:45:44.574 -07 000000487 INF: FPGA: Xmit EXLED1ON\n [RedLED] 17-03-18 06:45:44.574 -07 000000569 INF: FPGA: Recv EXLED1ON 17-03-18 06:45:44.584 -07 000000487 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:45:44.584 -07 000000487 INF: FPGA: Xmit EXLED1ADCR\n [RedLED] 17-03-18 06:45:44.584 -07 000000480 INF: FPGA: Recv EXLED1ADCR 23112 17-03-18 06:45:44.594 -07 000000487 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:44.594 -07 000000487 INF: RedLED: Using Red data: Photodiode ADC 23112 --> 7.4 mW (old method), or 204.9 mW (new method). Difference = 197.5 mW 17-03-18 06:45:44.594 -07 000000487 INF: FPGA: Xmit EXLED1OFF\n [RedLED] 17-03-18 06:45:44.594 -07 000000480 INF: FPGA: Recv EXLED1OFF 17-03-18 06:45:44.604 -07 000000487 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:44.604 -07 000000487 INF: RedLED: LED was on for 19 ms 17-03-18 06:45:44.604 -07 000000487 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 25 ms. 17-03-18 06:45:44.604 -07 000000487 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start. 17-03-18 06:45:44.604 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:45:44.604 -07 000000487 INF: FPGA: Xmit EXLED2ON\n [GreenLED] 17-03-18 06:45:44.604 -07 000000480 INF: FPGA: Recv EXLED2ON 17-03-18 06:45:44.614 -07 000000487 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:45:44.614 -07 000000487 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED] 17-03-18 06:45:44.614 -07 000000480 INF: FPGA: Recv EXLED1ADCR 2099 17-03-18 06:45:44.624 -07 000000487 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:44.624 -07 000000487 INF: GreenLED: Using Green data: Photodiode ADC 2099 --> 0.9 mW (old method), or 182.4 mW (new method). Difference = 181.5 mW 17-03-18 06:45:44.624 -07 000000487 INF: FPGA: Xmit EXLED2OFF\n [GreenLED] 17-03-18 06:45:44.624 -07 000000480 INF: FPGA: Recv EXLED2OFF 17-03-18 06:45:44.634 -07 000000487 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:44.634 -07 000000487 INF: GreenLED: LED was on for 20 ms 17-03-18 06:45:44.634 -07 000000487 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms. 17-03-18 06:45:44.634 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator] 17-03-18 06:45:44.634 -07 000000585 INF: FPGA: Recv EMCUR 17-03-18 06:45:44.644 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:45:44.644 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator] 17-03-18 06:45:45.144 -07 000000581 INF: FPGA: Recv EMOUT 17-03-18 06:45:45.144 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall 17-03-18 06:45:45.144 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator] 17-03-18 06:45:45.144 -07 000000461 INF: FPGA: Recv EMCUR 17-03-18 06:45:45.154 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:45:45.154 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 06:45:45.154 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.3798828125, Z-Position -0.126413505121525. ------ 17-03-18 06:45:45.154 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:45:45.154 -07 000000625 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17841 mm 17-03-18 06:45:45.154 -07 000000625 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:45:45.154 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True) 17-03-18 06:45:45.154 -07 000000608 INF: Y Motor: Moving to 59.9126 mm, started at 75.3799 mm, delta = -15.4673 mm 17-03-18 06:45:45.154 -07 000000581 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:45:45.154 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 38974, sync = True, waitForSettling = False) 17-03-18 06:45:45.154 -07 000000480 INF: Z Motor: Moving to -0.178412 mm, started at -0.126414 mm, distance = -52.00 um 17-03-18 06:45:45.164 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:45:45.164 -07 000000480 INF: FPGA: Xmit ZDACW 38974\n [Z Motor] 17-03-18 06:45:45.164 -07 000000581 INF: FPGA: Recv ZDACW 17-03-18 06:45:45.174 -07 000000480 INF: FPGA: 'ZDACW 38974' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 06:45:45.174 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:45:45.174 -07 000000569 INF: FPGA: Recv YRDPOS 154378 17-03-18 06:45:45.184 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall 17-03-18 06:45:45.184 -07 000000462 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:45:45.184 -07 000000608 INF: Y Motor: Encoder = 154378 = motor step 120607.8 = 75.3799 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:45:45.184 -07 000000608 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False 17-03-18 06:45:45.184 -07 000000608 INF: Y Motor: Moving to 122701 encoder counts 17-03-18 06:45:45.194 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:45:45.194 -07 000000569 INF: FPGA: Recv ZDACR 38974 17-03-18 06:45:45.204 -07 000000608 INF: FPGA: Xmit YMVTO 122701\n [Y Motor] 17-03-18 06:45:45.204 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:45:45.204 -07 000000480 INF: Z Motor: MoveAbsStepped took 41 ms (did NOT wait for settling yet)) 17-03-18 06:45:45.384 -07 000000487 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:45:45.384 -07 000000462 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 223 ms overall 17-03-18 06:45:46.884 -07 000000512 INF: FPGA: Recv YMVTO 122701 24777 17-03-18 06:45:46.884 -07 000000608 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1705 ms overall 17-03-18 06:45:46.884 -07 000000608 INF: Y Motor: Position error before settling = 0 encoder counts (0.000 mm) 17-03-18 06:45:46.884 -07 000000608 INF: Y Motor: To move from 75.380 to 59.913 (-15.467 mm) should take 24748 steps, but required 24777 steps (15.486 mm). Slippage = 0.018 mm (0.00%). 17-03-18 06:45:46.884 -07 000000608 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1706 ms, distance = 15.467 mm, average velocity = 9.066 mm/sec 17-03-18 06:45:46.894 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:45:46.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:45:48.364 -07 000000474 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.014009, 17-03-18 06:45:49.734 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:45:49.734 -07 000000474 INF: FPGA: Recv YRDPOS 122695 17-03-18 06:45:49.744 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:45:49.744 -07 000000608 INF: Y Motor: Encoder = 122695 = motor step 95855.5 = 59.9097 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:45:49.774 -07 000000608 INF: Y Motor: After move to 59.912609, error = -0.002941, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:45:49.774 -07 000000608 INF: Y Motor: Position error after settling = -6 encoder counts (-0.003 mm), Delta during settling = -6 counts (-0.003 mm) 17-03-18 06:45:49.774 -07 000000608 INF: Y Motor: Moved to 59.9097 after 4616 ms 17-03-18 06:45:49.774 -07 000000625 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178412 mm (DAC = 38974) 17-03-18 06:45:49.774 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:49.774 -07 000000487 INF: FPGA: Recv ZSGSRD 37065 17-03-18 06:45:49.784 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:45:49.784 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:49.784 -07 000000487 INF: FPGA: Recv ZSGSRD 37057 17-03-18 06:45:49.794 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:49.794 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:49.794 -07 000000487 INF: FPGA: Recv ZSGSRD 37064 17-03-18 06:45:49.804 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:49.804 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:49.804 -07 000000608 INF: FPGA: Recv ZSGSRD 37058 17-03-18 06:45:49.814 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:49.814 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:49.814 -07 000000487 INF: FPGA: Recv ZSGSRD 37067 17-03-18 06:45:49.824 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:49.824 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:49.824 -07 000000487 INF: FPGA: Recv ZSGSRD 37058 17-03-18 06:45:49.834 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:49.834 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:49.834 -07 000000487 INF: FPGA: Recv ZSGSRD 37063 17-03-18 06:45:49.844 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:49.844 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:49.844 -07 000000487 INF: FPGA: Recv ZSGSRD 37067 17-03-18 06:45:49.854 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:49.854 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:49.854 -07 000000569 INF: FPGA: Recv ZSGSRD 37065 17-03-18 06:45:49.864 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:49.864 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:49.864 -07 000000569 INF: FPGA: Recv ZSGSRD 37064 17-03-18 06:45:49.874 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:49.874 -07 000000625 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:45:49.874 -07 000000608 INF: FPGA: Recv ZPIEZORD 33277 17-03-18 06:45:49.884 -07 000000625 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:49.884 -07 000000625 INF: Z Motor: Piezo is near 51.1 V (nominally 0 to 100 V), expect near 59.5 V, since DAC is at 5.947 V. Piezo Error = -8.4 V. 17-03-18 06:45:49.884 -07 000000625 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.4 um, Read 10 ADC samples: Avg = 37063 (-177.5 uncal um), Error = 0.9 uncal um, Median = 37064 (-177.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 37057 (-177.5 uncal um), Max = 37067 (-177.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:45:49.884 -07 000000625 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37063, posNoise = 4, negNoise = 6 17-03-18 06:45:49.884 -07 000000625 INF: Z Motor: After move to -0.178412, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:45:49.884 -07 000000625 INF: Z Motor: Settle wait time = 4618 ms, measure time = 103 ms (allowed 150 ms), total time = 4721 ms 17-03-18 06:45:49.884 -07 000000625 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms 17-03-18 06:45:49.934 -07 000000625 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4775 ms 17-03-18 06:45:49.934 -07 000000625 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:45:49.934 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:45:49.934 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:45:49.934 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:45:49.934 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:45:49.934 -07 000000581 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:45:49.934 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:45:49.934 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 06:45:49.934 -07 000000581 INF: Camera: sBCa_SetPowerMode(785074288, 1) start. 17-03-18 06:45:49.964 -07 000000581 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms. 17-03-18 06:45:49.964 -07 000000581 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:45:49.964 -07 000000581 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms. 17-03-18 06:45:49.964 -07 000000581 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:45:49.974 -07 000000581 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-18 06:45:49.974 -07 000000581 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms. 17-03-18 06:45:49.984 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:45:50.024 -07 000000625 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:45:50.324 -07 000000625 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:45:50.324 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:45:50.324 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:45:50.324 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2253754584, 0x0, 559484976) start. 17-03-18 06:45:50.364 -07 000000608 INF: FPGA: Recv @CAMSNAP 380 17-03-18 06:45:50.364 -07 000000581 INF: FPGA: Recv CAMSNAP 17-03-18 06:45:50.364 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 387 ms overall 17-03-18 06:45:50.454 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2253754584, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 06:45:50.454 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:50.454 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms. 17-03-18 06:45:50.454 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 06:45:50.564 -07 000000585 INF: Image SNR check: start 17-03-18 06:45:50.564 -07 000000461 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:45:50.564 -07 000000625 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:45:50.574 -07 000000461 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:45:50.574 -07 000000461 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:45:50.574 -07 000000585 INF: Image SNR check: pass [peak (Max-Min)=122.74] 17-03-18 06:45:50.574 -07 000000585 INF: Autofocus start 17-03-18 06:45:50.574 -07 000000585 INF: MeasureProfile start 17-03-18 06:45:50.584 -07 000000585 INF: MeasureProfile done 17-03-18 06:45:50.594 -07 000000585 INF: X=0 Z correction [um]=-0.0713522 17-03-18 06:45:50.594 -07 000000585 INF: Autofocus finished 17-03-18 06:45:50.774 -07 000000487 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:45:50.774 -07 000000461 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 06:45:50.774 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.90966796875, Z-position -0.178423926621221. ---------- 17-03-18 06:45:50.774 -07 000000610 INF: Cycle 153 Tile 1 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:45:50.784 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37471, sync = True, waitForSettling = True) 17-03-18 06:45:50.784 -07 000000610 INF: Z Motor: Moving to -0.171531 mm, started at -0.178424 mm, distance = 6.89 um 17-03-18 06:45:50.784 -07 000000610 INF: FPGA: Xmit ZDACW 37471\n [Z Motor] 17-03-18 06:45:50.784 -07 000000585 INF: FPGA: Recv ZDACW 17-03-18 06:45:50.794 -07 000000610 INF: FPGA: 'ZDACW 37471' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:45:50.794 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:45:50.794 -07 000000585 INF: FPGA: Recv ZDACR 37471 17-03-18 06:45:50.804 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:50.804 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:45:50.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:50.954 -07 000000585 INF: FPGA: Recv ZSGSRD 35991 17-03-18 06:45:50.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:45:50.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:50.964 -07 000000585 INF: FPGA: Recv ZSGSRD 35990 17-03-18 06:45:50.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:50.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:50.974 -07 000000585 INF: FPGA: Recv ZSGSRD 35997 17-03-18 06:45:50.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:50.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:50.984 -07 000000585 INF: FPGA: Recv ZSGSRD 35990 17-03-18 06:45:50.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:50.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:50.994 -07 000000585 INF: FPGA: Recv ZSGSRD 35988 17-03-18 06:45:51.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:51.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:51.004 -07 000000585 INF: FPGA: Recv ZSGSRD 35993 17-03-18 06:45:51.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:51.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:51.014 -07 000000585 INF: FPGA: Recv ZSGSRD 35991 17-03-18 06:45:51.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:51.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:51.024 -07 000000585 INF: FPGA: Recv ZSGSRD 35996 17-03-18 06:45:51.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:51.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:51.034 -07 000000585 INF: FPGA: Recv ZSGSRD 35987 17-03-18 06:45:51.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:51.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:51.044 -07 000000585 INF: FPGA: Recv ZSGSRD 35994 17-03-18 06:45:51.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:51.054 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:45:51.054 -07 000000512 INF: FPGA: Recv ZPIEZORD 31854 17-03-18 06:45:51.064 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:51.064 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.718 V. Piezo Error = -9.1 V. 17-03-18 06:45:51.064 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.5 um, Read 10 ADC samples: Avg = 35992 (-170.7 uncal um), Error = 0.9 uncal um, Median = 35991 (-170.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35987 (-170.6 uncal um), Max = 35997 (-170.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:45:51.064 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35992, posNoise = 5, negNoise = 5 17-03-18 06:45:51.064 -07 000000610 INF: Z Motor: After move to -0.171531, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:45:51.064 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-18 06:45:51.064 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:45:51.064 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:45:51.064 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:45:51.064 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:45:51.064 -07 000000581 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:45:51.064 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:45:51.064 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:45:51.064 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:45:51.064 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:45:51.064 -07 000000581 INF: Camera: sBCa_SetPowerMode(785074704, 1) start. 17-03-18 06:45:51.064 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:45:51.064 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:45:51.074 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 06:45:51.074 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:45:51.084 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-18 06:45:51.084 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 06:45:51.094 -07 000000581 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 22 ms. 17-03-18 06:45:51.094 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:45:51.094 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:45:51.094 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:45:51.104 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms. 17-03-18 06:45:51.104 -07 000000581 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 37 ms. 17-03-18 06:45:51.104 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 37647 150\n [Camera] 17-03-18 06:45:51.304 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:45:51.774 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:45:51.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:45:51.774 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:45:51.774 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:45:51.774 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start. 17-03-18 06:45:51.774 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:45:51.774 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:45:51.774 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:45:51.774 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:45:51.774 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start. 17-03-18 06:45:51.944 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:45:51.944 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:45:51.964 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37647 851 17-03-18 06:45:52.114 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:45:52.184 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 406 ms. 17-03-18 06:45:52.184 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 406 ms. 17-03-18 06:45:52.184 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:52.184 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 406 ms. 17-03-18 06:45:52.184 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 407 ms. 17-03-18 06:45:52.184 -07 000000581 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:52.184 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-18 06:45:52.184 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 414 ms. 17-03-18 06:45:52.194 -07 000000581 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-18 06:45:52.194 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 422 ms. 17-03-18 06:45:52.334 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:45:52.344 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:45:52.344 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:45:52.344 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:45:52.344 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:45:52.344 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:45:52.344 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:45:52.344 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-18 06:45:52.354 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:45:52.354 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:45:52.534 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:45:52.534 -07 000000625 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:45:52.534 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 37647 150' command took 2 ms to send, 1421 ms to get response, and 1425 ms overall 17-03-18 06:45:52.534 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 06:45:52.534 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 2 at Y-position 59.90966796875, Z-Position -0.171543595417395. ------ 17-03-18 06:45:52.534 -07 000000581 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:45:52.534 -07 000000487 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17775 mm 17-03-18 06:45:52.534 -07 000000487 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:45:52.544 -07 000000625 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:45:52.544 -07 000000581 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:45:52.544 -07 000000581 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:45:52.544 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 38830, sync = True, waitForSettling = False) 17-03-18 06:45:52.544 -07 000000569 INF: Z Motor: Moving to -0.177752 mm, started at -0.171544 mm, distance = -6.21 um 17-03-18 06:45:52.544 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True) 17-03-18 06:45:52.544 -07 000000608 INF: Y Motor: Moving to 60.7426 mm, started at 59.9097 mm, delta = 0.8329 mm 17-03-18 06:45:52.554 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:45:52.554 -07 000000606 INF: FPGA: Recv YRDPOS 122695 17-03-18 06:45:52.564 -07 000000569 INF: FPGA: Xmit ZDACW 38830\n [Z Motor] 17-03-18 06:45:52.564 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 17 ms overall 17-03-18 06:45:52.564 -07 000000608 INF: Y Motor: Encoder = 122695 = motor step 95855.5 = 59.9097 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:45:52.564 -07 000000608 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:45:52.564 -07 000000608 INF: Y Motor: Moving 1333 steps0 17-03-18 06:45:52.564 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 06:45:52.574 -07 000000569 INF: FPGA: 'ZDACW 38830' command took 0 ms to send, 0 ms to get response, and 28 ms overall 17-03-18 06:45:52.574 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:45:52.574 -07 000000590 INF: FPGA: Recv ZDACR 38830 17-03-18 06:45:52.584 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:45:52.584 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:52.584 -07 000000569 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet)) 17-03-18 06:45:52.744 -07 000000591 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:45:52.744 -07 000000581 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 06:45:52.744 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 400 ms. 17-03-18 06:45:52.744 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-18 06:45:52.744 -07 000000461 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:52.754 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 400 ms. 17-03-18 06:45:52.754 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-18 06:45:52.754 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:52.754 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:45:52.754 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 412 ms. 17-03-18 06:45:52.754 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:45:52.764 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 418 ms. 17-03-18 06:45:52.964 -07 000000437 INF: FPGA: Recv YMVTILE 17-03-18 06:45:52.964 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 400 ms overall 17-03-18 06:45:53.004 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:45:53.004 -07 000000462 INF: FPGA: Recv YRDPOS 124378 17-03-18 06:45:53.014 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:45:53.014 -07 000000608 INF: Y Motor: Encoder = 124378 = motor step 97170.3 = 60.7314 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:45:53.014 -07 000000608 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm) 17-03-18 06:45:53.014 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.833 mm, average velocity = 2.082 mm/sec 17-03-18 06:45:53.734 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.011254, 17-03-18 06:45:53.964 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:45:53.964 -07 000000569 INF: FPGA: Recv YRDPOS 124378 17-03-18 06:45:53.974 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:45:53.974 -07 000000608 INF: Y Motor: Encoder = 124378 = motor step 97170.3 = 60.7314 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:45:54.004 -07 000000608 INF: Y Motor: After move to 60.742607, error = -0.011162, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:45:54.004 -07 000000608 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:45:54.004 -07 000000608 INF: Y Motor: Moved to 60.7314 after 1462 ms (table move) 17-03-18 06:45:54.004 -07 000000487 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177752 mm (DAC = 38830) 17-03-18 06:45:54.004 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:54.014 -07 000000462 INF: FPGA: Recv ZSGSRD 36961 17-03-18 06:45:54.014 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 06:45:54.014 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:54.014 -07 000000626 INF: FPGA: Recv ZSGSRD 36964 17-03-18 06:45:54.024 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:45:54.024 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:54.024 -07 000000585 INF: FPGA: Recv ZSGSRD 36957 17-03-18 06:45:54.034 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:54.034 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:54.034 -07 000000581 INF: FPGA: Recv ZSGSRD 36965 17-03-18 06:45:54.044 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:54.064 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:54.064 -07 000000591 INF: FPGA: Recv ZSGSRD 36955 17-03-18 06:45:54.074 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:45:54.074 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:54.074 -07 000000480 INF: FPGA: Recv ZSGSRD 36960 17-03-18 06:45:54.084 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:54.094 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:54.094 -07 000000581 INF: FPGA: Recv ZSGSRD 36954 17-03-18 06:45:54.104 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:45:54.104 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:54.104 -07 000000625 INF: FPGA: Recv ZSGSRD 36966 17-03-18 06:45:54.114 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:45:54.124 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:54.124 -07 000000561 INF: FPGA: Recv ZSGSRD 36959 17-03-18 06:45:54.134 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:45:54.134 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:54.134 -07 000000480 INF: FPGA: Recv ZSGSRD 36962 17-03-18 06:45:54.144 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:54.154 -07 000000487 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:45:54.154 -07 000000626 INF: FPGA: Recv ZPIEZORD 33171 17-03-18 06:45:54.164 -07 000000487 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:45:54.164 -07 000000487 INF: Z Motor: Piezo is near 50.9 V (nominally 0 to 100 V), expect near 59.3 V, since DAC is at 5.925 V. Piezo Error = -8.4 V. 17-03-18 06:45:54.164 -07 000000487 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.8 um, Read 10 ADC samples: Avg = 36960 (-176.9 uncal um), Error = 0.9 uncal um, Median = 36960 (-176.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36954 (-176.8 uncal um), Max = 36966 (-176.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:45:54.164 -07 000000487 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36960, posNoise = 6, negNoise = 6 17-03-18 06:45:54.164 -07 000000487 INF: Z Motor: After move to -0.177752, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:45:54.164 -07 000000487 INF: Z Motor: Settle wait time = 1467 ms, measure time = 151 ms (allowed 150 ms), total time = 1618 ms 17-03-18 06:45:54.164 -07 000000487 INF: Z Motor: Warning: Actual position measuring time = 151 ms, longer than max expected time of 150 ms 17-03-18 06:45:54.164 -07 000000487 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1624 ms 17-03-18 06:45:54.164 -07 000000487 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:45:54.164 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:45:54.164 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:45:54.164 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:45:54.164 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:45:54.164 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:45:54.164 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:45:54.164 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:45:54.164 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:45:54.174 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 06:45:54.174 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:45:54.184 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms. 17-03-18 06:45:54.184 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms. 17-03-18 06:45:54.184 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:45:54.234 -07 000000590 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:45:54.524 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:45:54.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:45:54.534 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:45:54.534 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2602438304, 0x0, 559484976) start. 17-03-18 06:45:54.574 -07 000000581 INF: FPGA: Recv @CAMSNAP 381 17-03-18 06:45:54.574 -07 000000626 INF: FPGA: Recv CAMSNAP 17-03-18 06:45:54.574 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 386 ms overall 17-03-18 06:45:54.654 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2602438304, 0x0, 559484976) end. Duration was 125 ms. 17-03-18 06:45:54.654 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:54.664 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 06:45:54.664 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 06:45:54.674 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:45:54.674 -07 000000480 INF: Autofocus start 17-03-18 06:45:54.674 -07 000000480 INF: MeasureProfile start 17-03-18 06:45:54.674 -07 000000626 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:45:54.684 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:45:54.684 -07 000000561 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:45:54.684 -07 000000480 INF: MeasureProfile done 17-03-18 06:45:54.684 -07 000000480 INF: X=32 Z correction [um]=0.09220707 17-03-18 06:45:54.684 -07 000000480 INF: Autofocus finished 17-03-18 06:45:54.884 -07 000000626 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:45:54.884 -07 000000561 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 196 ms to get response, and 205 ms overall 17-03-18 06:45:54.894 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.7314453125, Z-position -0.17776223277062. ---------- 17-03-18 06:45:54.894 -07 000000610 INF: Cycle 153 Tile 2 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:45:54.894 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37362, sync = True, waitForSettling = True) 17-03-18 06:45:54.894 -07 000000610 INF: Z Motor: Moving to -0.171032 mm, started at -0.177762 mm, distance = 6.73 um 17-03-18 06:45:54.894 -07 000000610 INF: FPGA: Xmit ZDACW 37362\n [Z Motor] 17-03-18 06:45:54.894 -07 000000625 INF: FPGA: Recv ZDACW 17-03-18 06:45:54.904 -07 000000610 INF: FPGA: 'ZDACW 37362' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:45:54.904 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:45:54.904 -07 000000625 INF: FPGA: Recv ZDACR 37362 17-03-18 06:45:54.914 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:54.914 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:45:55.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:55.064 -07 000000625 INF: FPGA: Recv ZSGSRD 35913 17-03-18 06:45:55.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:45:55.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:55.074 -07 000000625 INF: FPGA: Recv ZSGSRD 35919 17-03-18 06:45:55.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:55.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:55.084 -07 000000581 INF: FPGA: Recv ZSGSRD 35917 17-03-18 06:45:55.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:55.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:55.094 -07 000000590 INF: FPGA: Recv ZSGSRD 35916 17-03-18 06:45:55.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:55.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:55.104 -07 000000590 INF: FPGA: Recv ZSGSRD 35911 17-03-18 06:45:55.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:55.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:55.114 -07 000000590 INF: FPGA: Recv ZSGSRD 35914 17-03-18 06:45:55.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:55.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:55.124 -07 000000590 INF: FPGA: Recv ZSGSRD 35923 17-03-18 06:45:55.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:55.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:55.134 -07 000000590 INF: FPGA: Recv ZSGSRD 35908 17-03-18 06:45:55.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:55.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:55.144 -07 000000480 INF: FPGA: Recv ZSGSRD 35913 17-03-18 06:45:55.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:55.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:55.154 -07 000000480 INF: FPGA: Recv ZSGSRD 35913 17-03-18 06:45:55.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:55.164 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:45:55.164 -07 000000480 INF: FPGA: Recv ZPIEZORD 31743 17-03-18 06:45:55.174 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:55.174 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.701 V. Piezo Error = -9.2 V. 17-03-18 06:45:55.174 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.0 um, Read 10 ADC samples: Avg = 35915 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35914 (-170.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35908 (-170.1 uncal um), Max = 35923 (-170.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 06:45:55.174 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35915, posNoise = 8, negNoise = 7 17-03-18 06:45:55.174 -07 000000610 INF: Z Motor: After move to -0.171032, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:45:55.174 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 06:45:55.174 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:45:55.174 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:45:55.174 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:45:55.174 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:45:55.174 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:45:55.174 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:45:55.174 -07 000000581 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:45:55.174 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:45:55.174 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:45:55.174 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:45:55.174 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:45:55.174 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:45:55.184 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:45:55.184 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:45:55.184 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:45:55.184 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:45:55.194 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 06:45:55.194 -07 000000581 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 06:45:55.194 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 06:45:55.194 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:45:55.194 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 37539 150\n [Camera] 17-03-18 06:45:55.394 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:45:55.864 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:45:55.864 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:45:55.864 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:45:55.874 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:45:55.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:45:55.874 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:45:55.994 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:45:55.994 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2151893096, 0x0, 391868352) start. 17-03-18 06:45:55.994 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:45:55.994 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-18 06:45:56.054 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37539 851 17-03-18 06:45:56.204 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:45:56.384 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2151893096, 0x0, 391868352) end. Duration was 395 ms. 17-03-18 06:45:56.384 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-18 06:45:56.384 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:56.394 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 395 ms. 17-03-18 06:45:56.394 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-18 06:45:56.394 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:56.394 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:45:56.394 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 524 ms. 17-03-18 06:45:56.394 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:45:56.404 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 529 ms. 17-03-18 06:45:56.434 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:45:56.434 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:45:56.434 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:45:56.434 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:45:56.434 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:45:56.434 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:45:56.444 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:45:56.444 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-18 06:45:56.444 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:45:56.444 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 06:45:56.624 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:45:56.624 -07 000000480 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:45:56.624 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 37539 150' command took 2 ms to send, 1414 ms to get response, and 1424 ms overall 17-03-18 06:45:56.624 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.171809 17-03-18 06:45:56.624 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17181 mm 17-03-18 06:45:56.624 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:45:56.624 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True) 17-03-18 06:45:56.624 -07 000000590 INF: Y Motor: Moving to 61.5726 mm, started at 60.7314 mm, delta = 0.8412 mm 17-03-18 06:45:56.624 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 37532, sync = True, waitForSettling = False) 17-03-18 06:45:56.624 -07 000000591 INF: Z Motor: Moving to -0.171810 mm, started at -0.171049 mm, distance = -0.76 um 17-03-18 06:45:56.624 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:45:56.634 -07 000000591 INF: FPGA: Xmit ZDACW 37532\n [Z Motor] 17-03-18 06:45:56.634 -07 000000626 INF: FPGA: Recv YRDPOS 124379 17-03-18 06:45:56.634 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-18 06:45:56.634 -07 000000590 INF: Y Motor: Encoder = 124379 = motor step 97171.1 = 60.7319 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:45:56.634 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 06:45:56.634 -07 000000590 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:45:56.634 -07 000000590 INF: Y Motor: Moving 1345 steps-23 17-03-18 06:45:56.644 -07 000000591 INF: FPGA: 'ZDACW 37532' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:45:56.644 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:45:56.644 -07 000000447 INF: FPGA: Recv ZDACR 37532 17-03-18 06:45:56.654 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:45:56.654 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:56.654 -07 000000591 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet)) 17-03-18 06:45:56.834 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 398 ms. 17-03-18 06:45:56.834 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms. 17-03-18 06:45:56.834 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:56.844 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 396 ms. 17-03-18 06:45:56.844 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-18 06:45:56.844 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:56.844 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:45:56.844 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms. 17-03-18 06:45:56.844 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:45:56.854 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms. 17-03-18 06:45:56.894 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:45:56.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:45:57.024 -07 000000487 INF: FPGA: Recv YMVTILE 17-03-18 06:45:57.024 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 390 ms overall 17-03-18 06:45:57.084 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:45:57.084 -07 000000487 INF: FPGA: Recv YRDPOS 126080 17-03-18 06:45:57.094 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:45:57.094 -07 000000590 INF: Y Motor: Encoder = 126080 = motor step 98500.0 = 61.5625 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:45:57.094 -07 000000590 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm) 17-03-18 06:45:57.094 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.841 mm, average velocity = 2.157 mm/sec 17-03-18 06:45:58.044 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:45:58.044 -07 000000437 INF: FPGA: Recv YRDPOS 126080 17-03-18 06:45:58.054 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:45:58.054 -07 000000590 INF: Y Motor: Encoder = 126080 = motor step 98500.0 = 61.5625 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:45:58.084 -07 000000590 INF: Y Motor: After move to 61.572609, error = -0.010109, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:45:58.084 -07 000000590 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:45:58.084 -07 000000590 INF: Y Motor: Moved to 61.5625 after 1453 ms (table move) 17-03-18 06:45:58.084 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171810 mm (DAC = 37532) 17-03-18 06:45:58.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.084 -07 000000581 INF: FPGA: Recv ZSGSRD 36037 17-03-18 06:45:58.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 06:45:58.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.094 -07 000000561 INF: FPGA: Recv ZSGSRD 36041 17-03-18 06:45:58.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.104 -07 000000591 INF: FPGA: Recv ZSGSRD 36038 17-03-18 06:45:58.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.114 -07 000000581 INF: FPGA: Recv ZSGSRD 36032 17-03-18 06:45:58.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.124 -07 000000561 INF: FPGA: Recv ZSGSRD 36034 17-03-18 06:45:58.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.134 -07 000000462 INF: FPGA: Recv ZSGSRD 36040 17-03-18 06:45:58.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.144 -07 000000561 INF: FPGA: Recv ZSGSRD 36027 17-03-18 06:45:58.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.154 -07 000000591 INF: FPGA: Recv ZSGSRD 36027 17-03-18 06:45:58.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.164 -07 000000561 INF: FPGA: Recv ZSGSRD 36041 17-03-18 06:45:58.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.174 -07 000000591 INF: FPGA: Recv ZSGSRD 36035 17-03-18 06:45:58.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.184 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:45:58.184 -07 000000561 INF: FPGA: Recv ZPIEZORD 31958 17-03-18 06:45:58.194 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.194 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.727 V. Piezo Error = -9.0 V. 17-03-18 06:45:58.194 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.8 um, Read 10 ADC samples: Avg = 36035 (-170.9 uncal um), Error = 0.9 uncal um, Median = 36036 (-170.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36027 (-170.9 uncal um), Max = 36041 (-171.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 06:45:58.194 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36035, posNoise = 6, negNoise = 8 17-03-18 06:45:58.194 -07 000000610 INF: Z Motor: After move to -0.171810, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:45:58.194 -07 000000610 INF: Z Motor: Settle wait time = 1457 ms, measure time = 104 ms (allowed 150 ms), total time = 1561 ms 17-03-18 06:45:58.194 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 06:45:58.244 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1613 ms 17-03-18 06:45:58.244 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:45:58.244 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.5625, Z-position -0.171819836539491. ---------- 17-03-18 06:45:58.244 -07 000000610 INF: Cycle 153 Tile 3 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:45:58.244 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37355, sync = True, waitForSettling = True) 17-03-18 06:45:58.244 -07 000000610 INF: Z Motor: Moving to -0.171000 mm, started at -0.171820 mm, distance = 0.82 um 17-03-18 06:45:58.244 -07 000000610 INF: FPGA: Xmit ZDACW 37355\n [Z Motor] 17-03-18 06:45:58.244 -07 000000461 INF: FPGA: Recv ZDACW 17-03-18 06:45:58.254 -07 000000610 INF: FPGA: 'ZDACW 37355' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:45:58.254 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:45:58.254 -07 000000590 INF: FPGA: Recv ZDACR 37355 17-03-18 06:45:58.264 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.264 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:45:58.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.414 -07 000000626 INF: FPGA: Recv ZSGSRD 35913 17-03-18 06:45:58.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:45:58.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.424 -07 000000561 INF: FPGA: Recv ZSGSRD 35910 17-03-18 06:45:58.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.434 -07 000000591 INF: FPGA: Recv ZSGSRD 35907 17-03-18 06:45:58.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.444 -07 000000581 INF: FPGA: Recv ZSGSRD 35911 17-03-18 06:45:58.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.454 -07 000000591 INF: FPGA: Recv ZSGSRD 35907 17-03-18 06:45:58.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.464 -07 000000561 INF: FPGA: Recv ZSGSRD 35907 17-03-18 06:45:58.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.474 -07 000000626 INF: FPGA: Recv ZSGSRD 35904 17-03-18 06:45:58.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.484 -07 000000581 INF: FPGA: Recv ZSGSRD 35912 17-03-18 06:45:58.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.494 -07 000000626 INF: FPGA: Recv ZSGSRD 35913 17-03-18 06:45:58.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:45:58.504 -07 000000561 INF: FPGA: Recv ZSGSRD 35908 17-03-18 06:45:58.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.514 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:45:58.514 -07 000000626 INF: FPGA: Recv ZPIEZORD 31781 17-03-18 06:45:58.524 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:45:58.524 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.700 V. Piezo Error = -9.1 V. 17-03-18 06:45:58.524 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.0 um, Read 10 ADC samples: Avg = 35909 (-170.1 uncal um), Error = 0.9 uncal um, Median = 35909 (-170.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35904 (-170.1 uncal um), Max = 35913 (-170.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:45:58.524 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35909, posNoise = 4, negNoise = 5 17-03-18 06:45:58.524 -07 000000610 INF: Z Motor: After move to -0.171000, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:45:58.524 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 06:45:58.524 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:45:58.524 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:45:58.524 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:45:58.524 -07 000000437 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:45:58.524 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:45:58.524 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:45:58.524 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:45:58.524 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:45:58.524 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:45:58.524 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:45:58.524 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:45:58.524 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:45:58.534 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:45:58.534 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:45:58.534 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:45:58.534 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:45:58.544 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 06:45:58.544 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:45:58.544 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 06:45:58.544 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:45:58.544 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 37532 150\n [Camera] 17-03-18 06:45:58.744 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:45:59.104 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.981281, 17-03-18 06:45:59.214 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:45:59.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:45:59.214 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:45:59.214 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:45:59.214 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:45:59.214 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:45:59.224 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:45:59.224 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) start. 17-03-18 06:45:59.224 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:45:59.224 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-18 06:45:59.404 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37532 851 17-03-18 06:45:59.554 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:45:59.594 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 06:45:59.594 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 06:45:59.594 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:59.594 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 370 ms. 17-03-18 06:45:59.594 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms. 17-03-18 06:45:59.594 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:45:59.604 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:45:59.604 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 06:45:59.604 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:45:59.614 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 06:45:59.784 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:45:59.784 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:45:59.784 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:45:59.784 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:45:59.784 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:45:59.784 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:45:59.904 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:45:59.904 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start. 17-03-18 06:45:59.914 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:45:59.914 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-18 06:45:59.974 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:45:59.974 -07 000000590 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:45:59.974 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 37532 150' command took 2 ms to send, 1413 ms to get response, and 1425 ms overall 17-03-18 06:45:59.974 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.171262 17-03-18 06:45:59.974 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17126 mm 17-03-18 06:45:59.974 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:45:59.974 -07 000000447 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True) 17-03-18 06:45:59.974 -07 000000447 INF: Y Motor: Moving to 62.4026 mm, started at 61.5625 mm, delta = 0.8401 mm 17-03-18 06:45:59.974 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:45:59.974 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 37412, sync = True, waitForSettling = False) 17-03-18 06:45:59.974 -07 000000561 INF: Z Motor: Moving to -0.171261 mm, started at -0.171010 mm, distance = -0.25 um 17-03-18 06:45:59.984 -07 000000561 INF: FPGA: Xmit ZDACW 37412\n [Z Motor] 17-03-18 06:45:59.984 -07 000000591 INF: FPGA: Recv YRDPOS 126080 17-03-18 06:45:59.984 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-18 06:45:59.984 -07 000000447 INF: Y Motor: Encoder = 126080 = motor step 98500.0 = 61.5625 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:45:59.984 -07 000000447 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:45:59.984 -07 000000447 INF: Y Motor: Moving 1344 steps-21 17-03-18 06:45:59.984 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 06:45:59.994 -07 000000561 INF: FPGA: 'ZDACW 37412' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:45:59.994 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:45:59.994 -07 000000487 INF: FPGA: Recv ZDACR 37412 17-03-18 06:46:00.004 -07 000000447 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:00.004 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:00.004 -07 000000561 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet)) 17-03-18 06:46:00.284 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 06:46:00.284 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-18 06:46:00.284 -07 000000581 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:00.284 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 378 ms. 17-03-18 06:46:00.284 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-18 06:46:00.284 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:00.294 -07 000000581 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:00.294 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:00.294 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 508 ms. 17-03-18 06:46:00.294 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 511 ms. 17-03-18 06:46:00.374 -07 000000461 INF: FPGA: Recv YMVTILE 17-03-18 06:46:00.374 -07 000000447 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall 17-03-18 06:46:00.434 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:00.434 -07 000000480 INF: FPGA: Recv YRDPOS 127783 17-03-18 06:46:00.444 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:46:00.444 -07 000000447 INF: Y Motor: Encoder = 127783 = motor step 99830.5 = 62.3940 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:00.444 -07 000000447 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm) 17-03-18 06:46:00.444 -07 000000447 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.840 mm, average velocity = 2.121 mm/sec 17-03-18 06:46:01.394 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:01.394 -07 000000487 INF: FPGA: Recv YRDPOS 127783 17-03-18 06:46:01.404 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:01.404 -07 000000447 INF: Y Motor: Encoder = 127783 = motor step 99830.5 = 62.3940 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:01.434 -07 000000447 INF: Y Motor: After move to 62.402607, error = -0.008564, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:01.434 -07 000000447 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:01.434 -07 000000447 INF: Y Motor: Moved to 62.3940 after 1453 ms (table move) 17-03-18 06:46:01.434 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171261 mm (DAC = 37412) 17-03-18 06:46:01.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.434 -07 000000480 INF: FPGA: Recv ZSGSRD 35957 17-03-18 06:46:01.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:46:01.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.444 -07 000000480 INF: FPGA: Recv ZSGSRD 35955 17-03-18 06:46:01.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.454 -07 000000480 INF: FPGA: Recv ZSGSRD 35942 17-03-18 06:46:01.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.464 -07 000000581 INF: FPGA: Recv ZSGSRD 35946 17-03-18 06:46:01.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.474 -07 000000480 INF: FPGA: Recv ZSGSRD 35950 17-03-18 06:46:01.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.484 -07 000000581 INF: FPGA: Recv ZSGSRD 35945 17-03-18 06:46:01.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.494 -07 000000480 INF: FPGA: Recv ZSGSRD 35954 17-03-18 06:46:01.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.504 -07 000000581 INF: FPGA: Recv ZSGSRD 35954 17-03-18 06:46:01.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.514 -07 000000480 INF: FPGA: Recv ZSGSRD 35953 17-03-18 06:46:01.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.524 -07 000000581 INF: FPGA: Recv ZSGSRD 35951 17-03-18 06:46:01.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.534 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:01.534 -07 000000581 INF: FPGA: Recv ZPIEZORD 31843 17-03-18 06:46:01.544 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.544 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.709 V. Piezo Error = -9.1 V. 17-03-18 06:46:01.544 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35951 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35952 (-170.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35942 (-170.3 uncal um), Max = 35957 (-170.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 06:46:01.544 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35951, posNoise = 6, negNoise = 9 17-03-18 06:46:01.544 -07 000000610 INF: Z Motor: After move to -0.171261, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:01.544 -07 000000610 INF: Z Motor: Settle wait time = 1455 ms, measure time = 106 ms (allowed 150 ms), total time = 1561 ms 17-03-18 06:46:01.544 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:01.594 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1613 ms 17-03-18 06:46:01.594 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:01.594 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39404296875, Z-position -0.171280202719583. ---------- 17-03-18 06:46:01.594 -07 000000610 INF: Cycle 153 Tile 4 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:01.594 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37235, sync = True, waitForSettling = True) 17-03-18 06:46:01.594 -07 000000610 INF: Z Motor: Moving to -0.170451 mm, started at -0.171280 mm, distance = 0.83 um 17-03-18 06:46:01.594 -07 000000610 INF: FPGA: Xmit ZDACW 37235\n [Z Motor] 17-03-18 06:46:01.594 -07 000000461 INF: FPGA: Recv ZDACW 17-03-18 06:46:01.604 -07 000000610 INF: FPGA: 'ZDACW 37235' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:46:01.604 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:01.604 -07 000000461 INF: FPGA: Recv ZDACR 37235 17-03-18 06:46:01.614 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.614 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:01.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.764 -07 000000461 INF: FPGA: Recv ZSGSRD 35818 17-03-18 06:46:01.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:01.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.774 -07 000000487 INF: FPGA: Recv ZSGSRD 35825 17-03-18 06:46:01.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.784 -07 000000487 INF: FPGA: Recv ZSGSRD 35822 17-03-18 06:46:01.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.794 -07 000000461 INF: FPGA: Recv ZSGSRD 35824 17-03-18 06:46:01.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.804 -07 000000487 INF: FPGA: Recv ZSGSRD 35828 17-03-18 06:46:01.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.814 -07 000000487 INF: FPGA: Recv ZSGSRD 35823 17-03-18 06:46:01.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.824 -07 000000461 INF: FPGA: Recv ZSGSRD 35828 17-03-18 06:46:01.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.834 -07 000000487 INF: FPGA: Recv ZSGSRD 35824 17-03-18 06:46:01.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.844 -07 000000590 INF: FPGA: Recv ZSGSRD 35821 17-03-18 06:46:01.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:01.854 -07 000000590 INF: FPGA: Recv ZSGSRD 35824 17-03-18 06:46:01.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.864 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:01.864 -07 000000487 INF: FPGA: Recv ZPIEZORD 31669 17-03-18 06:46:01.874 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:01.874 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.682 V. Piezo Error = -9.2 V. 17-03-18 06:46:01.874 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35824 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35824 (-169.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35818 (-169.6 uncal um), Max = 35828 (-169.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:46:01.874 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35824, posNoise = 4, negNoise = 6 17-03-18 06:46:01.874 -07 000000610 INF: Z Motor: After move to -0.170451, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:01.874 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 06:46:01.874 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:01.874 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:01.874 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:01.874 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:01.874 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:01.874 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:01.874 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:01.874 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:01.874 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:01.874 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:01.874 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:01.874 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:01.884 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:46:01.884 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:01.884 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:46:01.884 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:01.894 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:01.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:01.894 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-18 06:46:01.894 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 06:46:01.894 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-18 06:46:01.894 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 06:46:01.894 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 37412 150\n [Camera] 17-03-18 06:46:02.094 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:02.564 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:02.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:02.564 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:02.564 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:02.564 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:02.564 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:02.564 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:02.574 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-18 06:46:02.574 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:02.574 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 06:46:02.754 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37412 851 17-03-18 06:46:02.904 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:02.944 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 06:46:02.944 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-18 06:46:02.944 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:02.944 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 377 ms. 17-03-18 06:46:02.944 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-18 06:46:02.944 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:02.954 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:02.954 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:02.954 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-18 06:46:02.954 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 06:46:03.134 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:03.134 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:03.134 -07 000000581 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:03.134 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:03.134 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:03.134 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:03.134 -07 000000581 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:03.134 -07 000000581 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) start. 17-03-18 06:46:03.144 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:03.144 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-18 06:46:03.324 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:46:03.324 -07 000000462 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:03.324 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 37412 150' command took 2 ms to send, 1412 ms to get response, and 1424 ms overall 17-03-18 06:46:03.324 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171011 17-03-18 06:46:03.324 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17101 mm 17-03-18 06:46:03.324 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:03.324 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True) 17-03-18 06:46:03.324 -07 000000591 INF: Y Motor: Moving to 63.2326 mm, started at 62.3940 mm, delta = 0.8386 mm 17-03-18 06:46:03.324 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 37357, sync = True, waitForSettling = False) 17-03-18 06:46:03.324 -07 000000590 INF: Z Motor: Moving to -0.171009 mm, started at -0.170464 mm, distance = -0.55 um 17-03-18 06:46:03.324 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:03.334 -07 000000590 INF: FPGA: Xmit ZDACW 37357\n [Z Motor] 17-03-18 06:46:03.334 -07 000000447 INF: FPGA: Recv YRDPOS 127784 17-03-18 06:46:03.334 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 06:46:03.334 -07 000000591 INF: Y Motor: Encoder = 127784 = motor step 99831.3 = 62.3945 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:03.334 -07 000000461 INF: FPGA: Recv ZDACW 17-03-18 06:46:03.334 -07 000000591 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:03.334 -07 000000591 INF: Y Motor: Moving 1341 steps-18 17-03-18 06:46:03.344 -07 000000590 INF: FPGA: 'ZDACW 37357' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 06:46:03.344 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:03.354 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:03.354 -07 000000480 INF: FPGA: Recv ZDACR 37357 17-03-18 06:46:03.364 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:46:03.364 -07 000000590 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet)) 17-03-18 06:46:03.514 -07 000000581 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 06:46:03.514 -07 000000581 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-18 06:46:03.514 -07 000000581 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:03.514 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 374 ms. 17-03-18 06:46:03.514 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 06:46:03.514 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:03.514 -07 000000581 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:03.514 -07 000000581 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 06:46:03.514 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:03.524 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 06:46:03.714 -07 000000474 INF: FPGA: Recv YMVTILE 17-03-18 06:46:03.714 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 379 ms overall 17-03-18 06:46:03.774 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:03.774 -07 000000462 INF: FPGA: Recv YRDPOS 129479 17-03-18 06:46:03.784 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:46:03.784 -07 000000591 INF: Y Motor: Encoder = 129479 = motor step 101155.5 = 63.2222 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:03.784 -07 000000591 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm) 17-03-18 06:46:03.784 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 379 ms, distance = 0.839 mm, average velocity = 2.213 mm/sec 17-03-18 06:46:04.464 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.970374, 17-03-18 06:46:04.734 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:04.734 -07 000000581 INF: FPGA: Recv YRDPOS 129479 17-03-18 06:46:04.744 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:04.744 -07 000000591 INF: Y Motor: Encoder = 129479 = motor step 101155.5 = 63.2222 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:04.774 -07 000000591 INF: Y Motor: After move to 63.232609, error = -0.010441, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:04.774 -07 000000591 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:04.774 -07 000000591 INF: Y Motor: Moved to 63.2222 after 1445 ms (table move) 17-03-18 06:46:04.774 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171009 mm (DAC = 37357) 17-03-18 06:46:04.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:04.774 -07 000000474 INF: FPGA: Recv ZSGSRD 35903 17-03-18 06:46:04.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:46:04.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:04.784 -07 000000591 INF: FPGA: Recv ZSGSRD 35915 17-03-18 06:46:04.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:04.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:04.794 -07 000000462 INF: FPGA: Recv ZSGSRD 35915 17-03-18 06:46:04.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:04.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:04.804 -07 000000591 INF: FPGA: Recv ZSGSRD 35909 17-03-18 06:46:04.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:04.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:04.814 -07 000000462 INF: FPGA: Recv ZSGSRD 35914 17-03-18 06:46:04.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:04.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:04.834 -07 000000447 INF: FPGA: Recv ZSGSRD 35910 17-03-18 06:46:04.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:46:04.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:04.854 -07 000000626 INF: FPGA: Recv ZSGSRD 35908 17-03-18 06:46:04.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:46:04.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:04.864 -07 000000590 INF: FPGA: Recv ZSGSRD 35918 17-03-18 06:46:04.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:04.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:04.884 -07 000000590 INF: FPGA: Recv ZSGSRD 35912 17-03-18 06:46:04.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:46:04.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:04.894 -07 000000474 INF: FPGA: Recv ZSGSRD 35909 17-03-18 06:46:04.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:04.924 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:04.924 -07 000000561 INF: FPGA: Recv ZPIEZORD 31802 17-03-18 06:46:04.934 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:46:04.934 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.700 V. Piezo Error = -9.1 V. 17-03-18 06:46:04.934 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.0 um, Read 10 ADC samples: Avg = 35911 (-170.1 uncal um), Error = 0.9 uncal um, Median = 35911 (-170.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35903 (-170.1 uncal um), Max = 35918 (-170.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 06:46:04.934 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35911, posNoise = 7, negNoise = 8 17-03-18 06:46:04.934 -07 000000610 INF: Z Motor: After move to -0.171009, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:04.934 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 153 ms (allowed 150 ms), total time = 1601 ms 17-03-18 06:46:04.934 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 153 ms, longer than max expected time of 150 ms 17-03-18 06:46:04.934 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms 17-03-18 06:46:04.934 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:04.934 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22216796875, Z-position -0.171023234233913. ---------- 17-03-18 06:46:04.934 -07 000000610 INF: Cycle 153 Tile 5 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:04.934 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37181, sync = True, waitForSettling = True) 17-03-18 06:46:04.934 -07 000000610 INF: Z Motor: Moving to -0.170204 mm, started at -0.171023 mm, distance = 0.82 um 17-03-18 06:46:04.934 -07 000000610 INF: FPGA: Xmit ZDACW 37181\n [Z Motor] 17-03-18 06:46:04.944 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 06:46:04.944 -07 000000610 INF: FPGA: 'ZDACW 37181' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-18 06:46:04.944 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:04.944 -07 000000590 INF: FPGA: Recv ZDACR 37181 17-03-18 06:46:04.954 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:04.954 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:05.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:05.104 -07 000000480 INF: FPGA: Recv ZSGSRD 35787 17-03-18 06:46:05.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:05.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:05.114 -07 000000590 INF: FPGA: Recv ZSGSRD 35788 17-03-18 06:46:05.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:05.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:05.124 -07 000000590 INF: FPGA: Recv ZSGSRD 35784 17-03-18 06:46:05.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:05.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:05.134 -07 000000447 INF: FPGA: Recv ZSGSRD 35781 17-03-18 06:46:05.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:05.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:05.144 -07 000000591 INF: FPGA: Recv ZSGSRD 35784 17-03-18 06:46:05.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:05.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:05.154 -07 000000590 INF: FPGA: Recv ZSGSRD 35790 17-03-18 06:46:05.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:05.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:05.164 -07 000000561 INF: FPGA: Recv ZSGSRD 35784 17-03-18 06:46:05.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:05.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:05.174 -07 000000591 INF: FPGA: Recv ZSGSRD 35785 17-03-18 06:46:05.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:05.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:05.184 -07 000000561 INF: FPGA: Recv ZSGSRD 35787 17-03-18 06:46:05.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:05.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:05.194 -07 000000590 INF: FPGA: Recv ZSGSRD 35786 17-03-18 06:46:05.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:05.204 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:05.204 -07 000000447 INF: FPGA: Recv ZPIEZORD 31632 17-03-18 06:46:05.214 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:05.214 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.673 V. Piezo Error = -9.2 V. 17-03-18 06:46:05.214 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.2 um, Read 10 ADC samples: Avg = 35786 (-169.3 uncal um), Error = 0.9 uncal um, Median = 35786 (-169.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35781 (-169.3 uncal um), Max = 35790 (-169.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:46:05.214 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35786, posNoise = 4, negNoise = 5 17-03-18 06:46:05.214 -07 000000610 INF: Z Motor: After move to -0.170204, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:05.214 -07 000000610 INF: Z Motor: MoveAbsStepped took 273 ms) 17-03-18 06:46:05.214 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:05.214 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:05.214 -07 000000474 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:05.214 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:05.214 -07 000000581 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:05.214 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:05.214 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:05.214 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:05.214 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:05.214 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:05.214 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:05.214 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:05.224 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 06:46:05.224 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:05.224 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:46:05.224 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:05.234 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 06:46:05.234 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-18 06:46:05.234 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 06:46:05.234 -07 000000581 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 06:46:05.234 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 37357 150\n [Camera] 17-03-18 06:46:05.434 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:05.904 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:05.904 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:05.904 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:05.904 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:05.904 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:05.904 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:06.024 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:06.024 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start. 17-03-18 06:46:06.024 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:06.024 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-18 06:46:06.094 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37357 851 17-03-18 06:46:06.244 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:06.394 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 367 ms. 17-03-18 06:46:06.394 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 367 ms. 17-03-18 06:46:06.394 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:06.394 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 06:46:06.394 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 06:46:06.394 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:06.394 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:06.404 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:06.404 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 496 ms. 17-03-18 06:46:06.404 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 498 ms. 17-03-18 06:46:06.474 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:06.474 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:06.474 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:06.474 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:06.474 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:06.474 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:06.484 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:06.484 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-18 06:46:06.484 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:06.484 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 06:46:06.664 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:46:06.664 -07 000000590 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:06.664 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 37357 150' command took 2 ms to send, 1413 ms to get response, and 1424 ms overall 17-03-18 06:46:06.664 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 06:46:06.664 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 6 at Y-position 63.22216796875, Z-Position -0.170220207716193. ------ 17-03-18 06:46:06.664 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:46:06.664 -07 000000561 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17648 mm 17-03-18 06:46:06.664 -07 000000561 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:06.674 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 38552, sync = True, waitForSettling = False) 17-03-18 06:46:06.674 -07 000000447 INF: Z Motor: Moving to -0.176480 mm, started at -0.170220 mm, distance = -6.26 um 17-03-18 06:46:06.674 -07 000000455 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:46:06.674 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 3 ms to get response, and 5 ms overall 17-03-18 06:46:06.674 -07 000000447 INF: FPGA: Xmit ZDACW 38552\n [Z Motor] 17-03-18 06:46:06.674 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True) 17-03-18 06:46:06.674 -07 000000480 INF: Y Motor: Moving to 64.0626 mm, started at 63.2222 mm, delta = 0.8404 mm 17-03-18 06:46:06.674 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 06:46:06.684 -07 000000447 INF: FPGA: 'ZDACW 38552' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:46:06.684 -07 000000591 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:46:06.694 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:06.694 -07 000000461 INF: FPGA: Recv YRDPOS 129479 17-03-18 06:46:06.704 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall 17-03-18 06:46:06.704 -07 000000480 INF: Y Motor: Encoder = 129479 = motor step 101155.5 = 63.2222 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:06.704 -07 000000480 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:06.704 -07 000000480 INF: Y Motor: Moving 1345 steps-21 17-03-18 06:46:06.704 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:06.704 -07 000000581 INF: FPGA: Recv ZDACR 38552 17-03-18 06:46:06.714 -07 000000447 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:46:06.714 -07 000000447 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet)) 17-03-18 06:46:06.714 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:06.854 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 06:46:06.854 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-18 06:46:06.854 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:06.854 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 06:46:06.854 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 06:46:06.854 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:06.864 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:46:06.864 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:46:06.864 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-18 06:46:06.864 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 06:46:06.884 -07 000000626 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:46:06.884 -07 000000591 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 208 ms overall 17-03-18 06:46:06.894 -07 000000581 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:06.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:07.094 -07 000000474 INF: FPGA: Recv YMVTILE 17-03-18 06:46:07.094 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 390 ms overall 17-03-18 06:46:07.144 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:07.144 -07 000000455 INF: FPGA: Recv YRDPOS 131186 17-03-18 06:46:07.154 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:46:07.154 -07 000000480 INF: Y Motor: Encoder = 131186 = motor step 102489.1 = 64.0557 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:07.154 -07 000000480 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm) 17-03-18 06:46:07.154 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.840 mm, average velocity = 2.155 mm/sec 17-03-18 06:46:08.104 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:08.104 -07 000000455 INF: FPGA: Recv YRDPOS 131186 17-03-18 06:46:08.114 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:08.114 -07 000000480 INF: Y Motor: Encoder = 131186 = motor step 102489.1 = 64.0557 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:08.144 -07 000000480 INF: Y Motor: After move to 64.062607, error = -0.006943, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:08.144 -07 000000480 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:08.144 -07 000000480 INF: Y Motor: Moved to 64.0557 after 1465 ms (table move) 17-03-18 06:46:08.144 -07 000000561 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176480 mm (DAC = 38552) 17-03-18 06:46:08.144 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:08.144 -07 000000447 INF: FPGA: Recv ZSGSRD 36762 17-03-18 06:46:08.154 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:46:08.154 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:08.154 -07 000000462 INF: FPGA: Recv ZSGSRD 36762 17-03-18 06:46:08.164 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:08.164 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:08.164 -07 000000455 INF: FPGA: Recv ZSGSRD 36752 17-03-18 06:46:08.174 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:08.174 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:08.174 -07 000000480 INF: FPGA: Recv ZSGSRD 36762 17-03-18 06:46:08.184 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:08.184 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:08.184 -07 000000474 INF: FPGA: Recv ZSGSRD 36761 17-03-18 06:46:08.194 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:08.194 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:08.194 -07 000000626 INF: FPGA: Recv ZSGSRD 36756 17-03-18 06:46:08.204 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:08.204 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:08.204 -07 000000455 INF: FPGA: Recv ZSGSRD 36763 17-03-18 06:46:08.214 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:08.214 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:08.214 -07 000000581 INF: FPGA: Recv ZSGSRD 36762 17-03-18 06:46:08.224 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:08.224 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:08.224 -07 000000447 INF: FPGA: Recv ZSGSRD 36765 17-03-18 06:46:08.234 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:08.234 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:08.234 -07 000000581 INF: FPGA: Recv ZSGSRD 36763 17-03-18 06:46:08.244 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:08.244 -07 000000561 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:08.244 -07 000000474 INF: FPGA: Recv ZPIEZORD 32933 17-03-18 06:46:08.254 -07 000000561 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:08.254 -07 000000561 INF: Z Motor: Piezo is near 50.4 V (nominally 0 to 100 V), expect near 58.8 V, since DAC is at 5.883 V. Piezo Error = -8.5 V. 17-03-18 06:46:08.254 -07 000000561 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.5 um, Read 10 ADC samples: Avg = 36761 (-175.6 uncal um), Error = 0.9 uncal um, Median = 36762 (-175.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36752 (-175.5 uncal um), Max = 36765 (-175.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 06:46:08.254 -07 000000561 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36761, posNoise = 4, negNoise = 9 17-03-18 06:46:08.254 -07 000000561 INF: Z Motor: After move to -0.176480, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:08.254 -07 000000561 INF: Z Motor: Settle wait time = 1470 ms, measure time = 106 ms (allowed 150 ms), total time = 1576 ms 17-03-18 06:46:08.254 -07 000000561 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:08.304 -07 000000561 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1631 ms 17-03-18 06:46:08.304 -07 000000561 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:08.304 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:08.304 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:08.304 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:08.304 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:08.304 -07 000000581 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:46:08.304 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:08.304 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 06:46:08.304 -07 000000581 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:46:08.314 -07 000000581 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 06:46:08.314 -07 000000581 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:46:08.324 -07 000000581 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms. 17-03-18 06:46:08.324 -07 000000581 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms. 17-03-18 06:46:08.324 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:46:08.374 -07 000000561 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:46:08.664 -07 000000581 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:46:08.674 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:46:08.674 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:46:08.674 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) start. 17-03-18 06:46:08.704 -07 000000480 INF: FPGA: Recv @CAMSNAP 380 17-03-18 06:46:08.714 -07 000000626 INF: FPGA: Recv CAMSNAP 17-03-18 06:46:08.714 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall 17-03-18 06:46:08.794 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 06:46:08.794 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:08.804 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 06:46:08.804 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 06:46:08.814 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:46:08.814 -07 000000455 INF: Autofocus start 17-03-18 06:46:08.814 -07 000000455 INF: MeasureProfile start 17-03-18 06:46:08.814 -07 000000474 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:46:08.824 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:46:08.824 -07 000000591 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:46:08.824 -07 000000455 INF: MeasureProfile done 17-03-18 06:46:08.824 -07 000000455 INF: X=-32 Z correction [um]=-0.2344 17-03-18 06:46:08.824 -07 000000455 INF: Autofocus finished 17-03-18 06:46:09.024 -07 000000462 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:46:09.024 -07 000000591 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 06:46:09.024 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.0556640625, Z-position -0.176483814554409. ---------- 17-03-18 06:46:09.024 -07 000000610 INF: Cycle 153 Tile 6 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:09.034 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37013, sync = True, waitForSettling = True) 17-03-18 06:46:09.034 -07 000000610 INF: Z Motor: Moving to -0.169435 mm, started at -0.176484 mm, distance = 7.05 um 17-03-18 06:46:09.034 -07 000000610 INF: FPGA: Xmit ZDACW 37013\n [Z Motor] 17-03-18 06:46:09.034 -07 000000455 INF: FPGA: Recv ZDACW 17-03-18 06:46:09.044 -07 000000610 INF: FPGA: 'ZDACW 37013' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.044 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:09.044 -07 000000561 INF: FPGA: Recv ZDACR 37013 17-03-18 06:46:09.054 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.054 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:09.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:09.204 -07 000000626 INF: FPGA: Recv ZSGSRD 35660 17-03-18 06:46:09.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:09.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:09.214 -07 000000581 INF: FPGA: Recv ZSGSRD 35667 17-03-18 06:46:09.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:09.224 -07 000000561 INF: FPGA: Recv ZSGSRD 35669 17-03-18 06:46:09.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:09.234 -07 000000626 INF: FPGA: Recv ZSGSRD 35665 17-03-18 06:46:09.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:09.244 -07 000000581 INF: FPGA: Recv ZSGSRD 35662 17-03-18 06:46:09.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:09.254 -07 000000462 INF: FPGA: Recv ZSGSRD 35666 17-03-18 06:46:09.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:09.264 -07 000000626 INF: FPGA: Recv ZSGSRD 35664 17-03-18 06:46:09.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:09.274 -07 000000447 INF: FPGA: Recv ZSGSRD 35664 17-03-18 06:46:09.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:09.284 -07 000000561 INF: FPGA: Recv ZSGSRD 35662 17-03-18 06:46:09.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:09.294 -07 000000626 INF: FPGA: Recv ZSGSRD 35663 17-03-18 06:46:09.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.304 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:09.304 -07 000000561 INF: FPGA: Recv ZPIEZORD 31445 17-03-18 06:46:09.314 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:09.314 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.648 V. Piezo Error = -9.3 V. 17-03-18 06:46:09.314 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.4 um, Read 10 ADC samples: Avg = 35664 (-168.6 uncal um), Error = 0.9 uncal um, Median = 35664 (-168.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35660 (-168.5 uncal um), Max = 35669 (-168.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:46:09.314 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35664, posNoise = 5, negNoise = 4 17-03-18 06:46:09.314 -07 000000610 INF: Z Motor: After move to -0.169435, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:09.314 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-18 06:46:09.314 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:09.314 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:09.314 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:09.314 -07 000000474 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:09.314 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:09.314 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:09.314 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:09.314 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:09.314 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:09.314 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:09.314 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:09.314 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:09.314 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:46:09.314 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:09.324 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:46:09.324 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:09.324 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 06:46:09.324 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 06:46:09.324 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 06:46:09.324 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 06:46:09.334 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 37190 150\n [Camera] 17-03-18 06:46:09.534 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:09.824 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.978563, 17-03-18 06:46:09.994 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:09.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:10.004 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:10.004 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:10.004 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:10.004 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:10.004 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:10.004 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) start. 17-03-18 06:46:10.004 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:10.004 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-18 06:46:10.194 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37190 853 17-03-18 06:46:10.344 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:10.374 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2334002848, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 06:46:10.374 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 06:46:10.374 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:10.384 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 371 ms. 17-03-18 06:46:10.384 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 06:46:10.384 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:10.384 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:10.384 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 06:46:10.384 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:10.394 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 06:46:10.564 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:10.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:10.564 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:10.564 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:10.564 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:10.684 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:10.684 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:10.684 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start. 17-03-18 06:46:10.684 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:10.684 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:46:10.754 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:46:10.754 -07 000000591 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:10.754 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 37190 150' command took 2 ms to send, 1418 ms to get response, and 1424 ms overall 17-03-18 06:46:10.754 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.169783 17-03-18 06:46:10.764 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.16978 mm 17-03-18 06:46:10.764 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:10.764 -07 000000581 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True) 17-03-18 06:46:10.764 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 37089, sync = True, waitForSettling = False) 17-03-18 06:46:10.764 -07 000000462 INF: Z Motor: Moving to -0.169783 mm, started at -0.169436 mm, distance = -0.35 um 17-03-18 06:46:10.764 -07 000000462 INF: FPGA: Xmit ZDACW 37089\n [Z Motor] 17-03-18 06:46:10.764 -07 000000581 INF: Y Motor: Moving to 64.8926 mm, started at 64.0557 mm, delta = 0.8369 mm 17-03-18 06:46:10.764 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 06:46:10.774 -07 000000462 INF: FPGA: 'ZDACW 37089' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:46:10.774 -07 000000581 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:10.774 -07 000000561 INF: FPGA: Recv YRDPOS 131186 17-03-18 06:46:10.784 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:10.784 -07 000000581 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-18 06:46:10.784 -07 000000581 INF: Y Motor: Encoder = 131186 = motor step 102489.1 = 64.0557 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:10.784 -07 000000581 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:10.784 -07 000000581 INF: Y Motor: Moving 1339 steps-14 17-03-18 06:46:10.784 -07 000000474 INF: FPGA: Recv ZDACR 37089 17-03-18 06:46:10.794 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:46:10.794 -07 000000462 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet)) 17-03-18 06:46:10.794 -07 000000581 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:11.064 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 378 ms. 17-03-18 06:46:11.064 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms. 17-03-18 06:46:11.064 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:11.064 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 06:46:11.064 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 06:46:11.064 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:11.064 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:11.064 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 502 ms. 17-03-18 06:46:11.074 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:11.074 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 06:46:11.164 -07 000000462 INF: FPGA: Recv YMVTILE 17-03-18 06:46:11.164 -07 000000581 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall 17-03-18 06:46:11.224 -07 000000581 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:11.224 -07 000000561 INF: FPGA: Recv YRDPOS 132869 17-03-18 06:46:11.234 -07 000000581 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:11.234 -07 000000581 INF: Y Motor: Encoder = 132869 = motor step 103803.9 = 64.8774 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:11.234 -07 000000581 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 06:46:11.234 -07 000000581 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.837 mm, average velocity = 2.157 mm/sec 17-03-18 06:46:11.894 -07 000000474 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:11.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:12.184 -07 000000581 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:12.184 -07 000000480 INF: FPGA: Recv YRDPOS 132869 17-03-18 06:46:12.194 -07 000000581 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.194 -07 000000581 INF: Y Motor: Encoder = 132869 = motor step 103803.9 = 64.8774 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:12.224 -07 000000581 INF: Y Motor: After move to 64.892609, error = -0.015167, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:12.224 -07 000000581 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:12.224 -07 000000581 INF: Y Motor: Moved to 64.8774 after 1459 ms (table move) 17-03-18 06:46:12.224 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169783 mm (DAC = 37089) 17-03-18 06:46:12.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.224 -07 000000581 INF: FPGA: Recv ZSGSRD 35723 17-03-18 06:46:12.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:46:12.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.234 -07 000000455 INF: FPGA: Recv ZSGSRD 35720 17-03-18 06:46:12.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.244 -07 000000581 INF: FPGA: Recv ZSGSRD 35717 17-03-18 06:46:12.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.254 -07 000000561 INF: FPGA: Recv ZSGSRD 35722 17-03-18 06:46:12.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.264 -07 000000581 INF: FPGA: Recv ZSGSRD 35720 17-03-18 06:46:12.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.274 -07 000000455 INF: FPGA: Recv ZSGSRD 35715 17-03-18 06:46:12.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.284 -07 000000462 INF: FPGA: Recv ZSGSRD 35719 17-03-18 06:46:12.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.294 -07 000000581 INF: FPGA: Recv ZSGSRD 35717 17-03-18 06:46:12.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.304 -07 000000591 INF: FPGA: Recv ZSGSRD 35720 17-03-18 06:46:12.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.314 -07 000000561 INF: FPGA: Recv ZSGSRD 35718 17-03-18 06:46:12.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.324 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:12.324 -07 000000626 INF: FPGA: Recv ZPIEZORD 31555 17-03-18 06:46:12.334 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.334 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.659 V. Piezo Error = -9.2 V. 17-03-18 06:46:12.334 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35719 (-168.9 uncal um), Error = 0.9 uncal um, Median = 35720 (-168.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35715 (-168.9 uncal um), Max = 35723 (-168.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:46:12.334 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35719, posNoise = 4, negNoise = 4 17-03-18 06:46:12.334 -07 000000610 INF: Z Motor: After move to -0.169783, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:12.334 -07 000000610 INF: Z Motor: Settle wait time = 1462 ms, measure time = 106 ms (allowed 150 ms), total time = 1568 ms 17-03-18 06:46:12.334 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:12.384 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1619 ms 17-03-18 06:46:12.384 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:12.384 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87744140625, Z-position -0.169789785502695. ---------- 17-03-18 06:46:12.384 -07 000000610 INF: Cycle 153 Tile 7 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:12.384 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36912, sync = True, waitForSettling = True) 17-03-18 06:46:12.384 -07 000000610 INF: Z Motor: Moving to -0.168972 mm, started at -0.169790 mm, distance = 0.82 um 17-03-18 06:46:12.384 -07 000000610 INF: FPGA: Xmit ZDACW 36912\n [Z Motor] 17-03-18 06:46:12.384 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 06:46:12.394 -07 000000610 INF: FPGA: 'ZDACW 36912' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:46:12.394 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:12.394 -07 000000581 INF: FPGA: Recv ZDACR 36912 17-03-18 06:46:12.404 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.404 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:12.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.554 -07 000000474 INF: FPGA: Recv ZSGSRD 35594 17-03-18 06:46:12.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:12.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.564 -07 000000581 INF: FPGA: Recv ZSGSRD 35597 17-03-18 06:46:12.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.574 -07 000000480 INF: FPGA: Recv ZSGSRD 35592 17-03-18 06:46:12.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.584 -07 000000581 INF: FPGA: Recv ZSGSRD 35597 17-03-18 06:46:12.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.594 -07 000000480 INF: FPGA: Recv ZSGSRD 35597 17-03-18 06:46:12.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.604 -07 000000474 INF: FPGA: Recv ZSGSRD 35590 17-03-18 06:46:12.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.614 -07 000000480 INF: FPGA: Recv ZSGSRD 35595 17-03-18 06:46:12.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.624 -07 000000561 INF: FPGA: Recv ZSGSRD 35594 17-03-18 06:46:12.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.634 -07 000000626 INF: FPGA: Recv ZSGSRD 35595 17-03-18 06:46:12.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:12.644 -07 000000455 INF: FPGA: Recv ZSGSRD 35593 17-03-18 06:46:12.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.654 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:12.654 -07 000000591 INF: FPGA: Recv ZPIEZORD 31365 17-03-18 06:46:12.664 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:12.664 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.632 V. Piezo Error = -9.3 V. 17-03-18 06:46:12.664 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.0 um, Read 10 ADC samples: Avg = 35594 (-168.1 uncal um), Error = 0.9 uncal um, Median = 35594 (-168.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35590 (-168.1 uncal um), Max = 35597 (-168.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:46:12.664 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35594, posNoise = 3, negNoise = 4 17-03-18 06:46:12.664 -07 000000610 INF: Z Motor: After move to -0.168972, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:12.664 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 06:46:12.664 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:12.664 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:12.664 -07 000000581 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:12.664 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:12.664 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:12.664 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:12.664 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:12.664 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:12.664 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:12.664 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:12.664 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:12.664 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:12.674 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:46:12.674 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:12.674 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:46:12.674 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:12.684 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 06:46:12.684 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 06:46:12.684 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 06:46:12.684 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 06:46:12.684 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 37089 150\n [Camera] 17-03-18 06:46:12.884 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:13.344 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:13.344 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:13.354 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:13.354 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:13.354 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:13.354 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:13.354 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start. 17-03-18 06:46:13.354 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:13.364 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:13.364 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start. 17-03-18 06:46:13.544 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37089 851 17-03-18 06:46:13.694 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1004 17-03-18 06:46:13.734 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 375 ms. 17-03-18 06:46:13.734 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms. 17-03-18 06:46:13.734 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:13.734 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 06:46:13.734 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 06:46:13.734 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:13.734 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:13.734 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 06:46:13.734 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:13.744 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 06:46:13.914 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:13.914 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:13.914 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:13.914 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:13.914 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:13.924 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:13.924 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:13.924 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-18 06:46:13.924 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:13.924 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start. 17-03-18 06:46:14.104 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:46:14.104 -07 000000581 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:14.104 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 37089 150' command took 2 ms to send, 1418 ms to get response, and 1425 ms overall 17-03-18 06:46:14.114 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.169718 17-03-18 06:46:14.114 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.16972 mm 17-03-18 06:46:14.114 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:14.114 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True) 17-03-18 06:46:14.114 -07 000000462 INF: Y Motor: Moving to 65.7226 mm, started at 64.8774 mm, delta = 0.8452 mm 17-03-18 06:46:14.114 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:14.114 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 37075, sync = True, waitForSettling = False) 17-03-18 06:46:14.114 -07 000000447 INF: Z Motor: Moving to -0.169718 mm, started at -0.168987 mm, distance = -0.73 um 17-03-18 06:46:14.114 -07 000000455 INF: FPGA: Recv YRDPOS 132869 17-03-18 06:46:14.124 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:46:14.124 -07 000000462 INF: Y Motor: Encoder = 132869 = motor step 103803.9 = 64.8774 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:14.234 -07 000000462 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:14.234 -07 000000462 INF: Y Motor: Moving 1352 steps-31 17-03-18 06:46:14.234 -07 000000447 INF: FPGA: Xmit ZDACW 37075\n [Z Motor] 17-03-18 06:46:14.234 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 06:46:14.244 -07 000000447 INF: FPGA: 'ZDACW 37075' command took 113 ms to send, 0 ms to get response, and 125 ms overall 17-03-18 06:46:14.244 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:14.244 -07 000000480 INF: FPGA: Recv ZDACR 37075 17-03-18 06:46:14.254 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:14.254 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:14.254 -07 000000447 INF: Z Motor: MoveAbsStepped took 136 ms (did NOT wait for settling yet)) 17-03-18 06:46:14.314 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 386 ms. 17-03-18 06:46:14.314 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 06:46:14.314 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:14.314 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 388 ms. 17-03-18 06:46:14.314 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 06:46:14.314 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:14.324 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:14.324 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:14.324 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-18 06:46:14.324 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms. 17-03-18 06:46:14.624 -07 000000480 INF: FPGA: Recv YMVTILE 17-03-18 06:46:14.624 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall 17-03-18 06:46:14.684 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:14.684 -07 000000474 INF: FPGA: Recv YRDPOS 134580 17-03-18 06:46:14.694 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:14.694 -07 000000462 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:14.694 -07 000000462 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm) 17-03-18 06:46:14.694 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.845 mm, average velocity = 2.140 mm/sec 17-03-18 06:46:15.184 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.993549, 17-03-18 06:46:15.644 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:15.644 -07 000000581 INF: FPGA: Recv YRDPOS 134580 17-03-18 06:46:15.654 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:15.654 -07 000000462 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:15.694 -07 000000462 INF: Y Motor: After move to 65.722610, error = -0.009720, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:15.694 -07 000000462 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:15.694 -07 000000462 INF: Y Motor: Moved to 65.7129 after 1576 ms (table move) 17-03-18 06:46:15.694 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169718 mm (DAC = 37075) 17-03-18 06:46:15.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:15.694 -07 000000480 INF: FPGA: Recv ZSGSRD 35707 17-03-18 06:46:15.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:46:15.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:15.704 -07 000000581 INF: FPGA: Recv ZSGSRD 35702 17-03-18 06:46:15.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:15.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:15.714 -07 000000480 INF: FPGA: Recv ZSGSRD 35708 17-03-18 06:46:15.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:15.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:15.724 -07 000000474 INF: FPGA: Recv ZSGSRD 35705 17-03-18 06:46:15.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:15.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:15.734 -07 000000447 INF: FPGA: Recv ZSGSRD 35707 17-03-18 06:46:15.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:15.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:15.744 -07 000000581 INF: FPGA: Recv ZSGSRD 35718 17-03-18 06:46:15.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:15.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:15.754 -07 000000561 INF: FPGA: Recv ZSGSRD 35704 17-03-18 06:46:15.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:15.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:15.764 -07 000000581 INF: FPGA: Recv ZSGSRD 35709 17-03-18 06:46:15.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:15.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:15.774 -07 000000462 INF: FPGA: Recv ZSGSRD 35705 17-03-18 06:46:15.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:15.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:15.784 -07 000000626 INF: FPGA: Recv ZSGSRD 35707 17-03-18 06:46:15.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:15.794 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:15.794 -07 000000462 INF: FPGA: Recv ZPIEZORD 31489 17-03-18 06:46:15.804 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:15.804 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.657 V. Piezo Error = -9.3 V. 17-03-18 06:46:15.804 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.7 um, Read 10 ADC samples: Avg = 35707 (-168.8 uncal um), Error = 0.9 uncal um, Median = 35707 (-168.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35702 (-168.8 uncal um), Max = 35718 (-168.9 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:46:15.804 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35707, posNoise = 11, negNoise = 5 17-03-18 06:46:15.804 -07 000000610 INF: Z Motor: After move to -0.169718, error = 0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:15.804 -07 000000610 INF: Z Motor: Settle wait time = 1578 ms, measure time = 108 ms (allowed 150 ms), total time = 1686 ms 17-03-18 06:46:15.804 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:15.854 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1739 ms 17-03-18 06:46:15.854 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:15.854 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.712890625, Z-position -0.169712694956993. ---------- 17-03-18 06:46:15.854 -07 000000610 INF: Cycle 153 Tile 8 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:15.854 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36898, sync = True, waitForSettling = True) 17-03-18 06:46:15.854 -07 000000610 INF: Z Motor: Moving to -0.168908 mm, started at -0.169713 mm, distance = 0.80 um 17-03-18 06:46:15.854 -07 000000610 INF: FPGA: Xmit ZDACW 36898\n [Z Motor] 17-03-18 06:46:15.854 -07 000000455 INF: FPGA: Recv ZDACW 17-03-18 06:46:15.864 -07 000000610 INF: FPGA: 'ZDACW 36898' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:46:15.864 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:15.864 -07 000000447 INF: FPGA: Recv ZDACR 36898 17-03-18 06:46:15.874 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:15.874 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:16.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:16.024 -07 000000561 INF: FPGA: Recv ZSGSRD 35585 17-03-18 06:46:16.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:16.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:16.034 -07 000000581 INF: FPGA: Recv ZSGSRD 35584 17-03-18 06:46:16.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:16.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:16.044 -07 000000462 INF: FPGA: Recv ZSGSRD 35584 17-03-18 06:46:16.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:16.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:16.054 -07 000000626 INF: FPGA: Recv ZSGSRD 35584 17-03-18 06:46:16.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:16.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:16.064 -07 000000480 INF: FPGA: Recv ZSGSRD 35581 17-03-18 06:46:16.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:16.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:16.074 -07 000000581 INF: FPGA: Recv ZSGSRD 35575 17-03-18 06:46:16.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:16.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:16.084 -07 000000455 INF: FPGA: Recv ZSGSRD 35580 17-03-18 06:46:16.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:16.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:16.094 -07 000000447 INF: FPGA: Recv ZSGSRD 35583 17-03-18 06:46:16.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:16.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:16.104 -07 000000480 INF: FPGA: Recv ZSGSRD 35582 17-03-18 06:46:16.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:16.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:16.114 -07 000000561 INF: FPGA: Recv ZSGSRD 35577 17-03-18 06:46:16.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:16.124 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:16.124 -07 000000626 INF: FPGA: Recv ZPIEZORD 31348 17-03-18 06:46:16.134 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:16.134 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.630 V. Piezo Error = -9.3 V. 17-03-18 06:46:16.134 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35582 (-168.0 uncal um), Error = 0.9 uncal um, Median = 35582 (-168.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35575 (-168.0 uncal um), Max = 35585 (-168.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 06:46:16.134 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35582, posNoise = 3, negNoise = 7 17-03-18 06:46:16.134 -07 000000610 INF: Z Motor: After move to -0.168908, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:16.134 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 06:46:16.134 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:16.134 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:16.134 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:16.134 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:16.134 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:16.134 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:16.134 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:16.134 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:16.134 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:16.134 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:16.134 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:16.134 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:16.144 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:46:16.144 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:16.144 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:46:16.144 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:16.154 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 06:46:16.154 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:46:16.154 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 06:46:16.154 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:46:16.154 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 37075 150\n [Camera] 17-03-18 06:46:16.354 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:16.824 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:16.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:16.824 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:16.824 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:16.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:16.824 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:16.834 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:16.834 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-18 06:46:16.834 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:16.834 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 06:46:16.894 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:16.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:17.014 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37075 851 17-03-18 06:46:17.164 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:17.204 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 373 ms. 17-03-18 06:46:17.204 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 06:46:17.204 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:17.204 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 370 ms. 17-03-18 06:46:17.204 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 06:46:17.204 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:17.214 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:46:17.214 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 06:46:17.214 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:46:17.214 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-18 06:46:17.394 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:17.394 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:17.394 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:17.394 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:17.394 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:17.394 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:17.394 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:17.394 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start. 17-03-18 06:46:17.404 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:17.404 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-18 06:46:17.584 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:46:17.584 -07 000000581 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:17.584 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 37075 150' command took 2 ms to send, 1413 ms to get response, and 1425 ms overall 17-03-18 06:46:17.584 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.169297 17-03-18 06:46:17.584 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.16930 mm 17-03-18 06:46:17.584 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:17.584 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 36983, sync = True, waitForSettling = False) 17-03-18 06:46:17.584 -07 000000462 INF: Z Motor: Moving to -0.169297 mm, started at -0.168910 mm, distance = -0.39 um 17-03-18 06:46:17.584 -07 000000462 INF: FPGA: Xmit ZDACW 36983\n [Z Motor] 17-03-18 06:46:17.594 -07 000000447 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True) 17-03-18 06:46:17.594 -07 000000447 INF: Y Motor: Moving to 66.5526 mm, started at 65.7129 mm, delta = 0.8397 mm 17-03-18 06:46:17.594 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:17.594 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 06:46:17.594 -07 000000462 INF: FPGA: 'ZDACW 36983' command took 0 ms to send, 3 ms to get response, and 4 ms overall 17-03-18 06:46:17.594 -07 000000474 INF: FPGA: Recv YRDPOS 134580 17-03-18 06:46:17.604 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:17.604 -07 000000447 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:17.604 -07 000000447 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:17.604 -07 000000447 INF: Y Motor: Moving 1344 steps-20 17-03-18 06:46:17.604 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:17.604 -07 000000626 INF: FPGA: Recv ZDACR 36983 17-03-18 06:46:17.614 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 16 ms overall 17-03-18 06:46:17.614 -07 000000462 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet)) 17-03-18 06:46:17.614 -07 000000447 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:17.774 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 06:46:17.784 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 06:46:17.784 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:17.784 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 06:46:17.784 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 06:46:17.784 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:17.784 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:17.784 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-18 06:46:17.784 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:17.794 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 06:46:17.984 -07 000000462 INF: FPGA: Recv YMVTILE 17-03-18 06:46:17.984 -07 000000447 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall 17-03-18 06:46:18.044 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:18.044 -07 000000480 INF: FPGA: Recv YRDPOS 136269 17-03-18 06:46:18.054 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:46:18.054 -07 000000447 INF: Y Motor: Encoder = 136269 = motor step 106460.2 = 66.5376 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:18.054 -07 000000447 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 06:46:18.054 -07 000000447 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.840 mm, average velocity = 2.164 mm/sec 17-03-18 06:46:19.004 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:19.004 -07 000000455 INF: FPGA: Recv YRDPOS 136270 17-03-18 06:46:19.014 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:19.014 -07 000000447 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:19.044 -07 000000447 INF: Y Motor: After move to 66.552605, error = -0.014519, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:19.044 -07 000000447 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 06:46:19.044 -07 000000447 INF: Y Motor: Moved to 66.5381 after 1455 ms (table move) 17-03-18 06:46:19.044 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169297 mm (DAC = 36983) 17-03-18 06:46:19.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.054 -07 000000626 INF: FPGA: Recv ZSGSRD 35644 17-03-18 06:46:19.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-18 06:46:19.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.054 -07 000000480 INF: FPGA: Recv ZSGSRD 35647 17-03-18 06:46:19.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:19.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.064 -07 000000447 INF: FPGA: Recv ZSGSRD 35636 17-03-18 06:46:19.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.074 -07 000000462 INF: FPGA: Recv ZSGSRD 35645 17-03-18 06:46:19.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.084 -07 000000626 INF: FPGA: Recv ZSGSRD 35643 17-03-18 06:46:19.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.094 -07 000000455 INF: FPGA: Recv ZSGSRD 35641 17-03-18 06:46:19.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.104 -07 000000474 INF: FPGA: Recv ZSGSRD 35641 17-03-18 06:46:19.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.114 -07 000000561 INF: FPGA: Recv ZSGSRD 35647 17-03-18 06:46:19.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.124 -07 000000626 INF: FPGA: Recv ZSGSRD 35644 17-03-18 06:46:19.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.134 -07 000000581 INF: FPGA: Recv ZSGSRD 35641 17-03-18 06:46:19.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.144 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:19.144 -07 000000474 INF: FPGA: Recv ZPIEZORD 31435 17-03-18 06:46:19.154 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.154 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.643 V. Piezo Error = -9.3 V. 17-03-18 06:46:19.154 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35643 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35644 (-168.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35636 (-168.4 uncal um), Max = 35647 (-168.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 06:46:19.154 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35643, posNoise = 4, negNoise = 7 17-03-18 06:46:19.154 -07 000000610 INF: Z Motor: After move to -0.169297, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:19.154 -07 000000610 INF: Z Motor: Settle wait time = 1459 ms, measure time = 102 ms (allowed 150 ms), total time = 1561 ms 17-03-18 06:46:19.154 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:19.204 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms 17-03-18 06:46:19.204 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:19.204 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5380859375, Z-position -0.169301545379921. ---------- 17-03-18 06:46:19.204 -07 000000610 INF: Cycle 153 Tile 9 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:19.204 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36806, sync = True, waitForSettling = True) 17-03-18 06:46:19.204 -07 000000610 INF: Z Motor: Moving to -0.168487 mm, started at -0.169302 mm, distance = 0.81 um 17-03-18 06:46:19.204 -07 000000610 INF: FPGA: Xmit ZDACW 36806\n [Z Motor] 17-03-18 06:46:19.204 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 06:46:19.214 -07 000000610 INF: FPGA: 'ZDACW 36806' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:46:19.214 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:19.214 -07 000000474 INF: FPGA: Recv ZDACR 36806 17-03-18 06:46:19.224 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.224 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:19.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.374 -07 000000455 INF: FPGA: Recv ZSGSRD 35524 17-03-18 06:46:19.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:19.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.384 -07 000000581 INF: FPGA: Recv ZSGSRD 35519 17-03-18 06:46:19.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.394 -07 000000561 INF: FPGA: Recv ZSGSRD 35521 17-03-18 06:46:19.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.404 -07 000000626 INF: FPGA: Recv ZSGSRD 35515 17-03-18 06:46:19.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.414 -07 000000447 INF: FPGA: Recv ZSGSRD 35518 17-03-18 06:46:19.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.424 -07 000000581 INF: FPGA: Recv ZSGSRD 35517 17-03-18 06:46:19.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.434 -07 000000480 INF: FPGA: Recv ZSGSRD 35519 17-03-18 06:46:19.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.444 -07 000000462 INF: FPGA: Recv ZSGSRD 35522 17-03-18 06:46:19.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.454 -07 000000455 INF: FPGA: Recv ZSGSRD 35517 17-03-18 06:46:19.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:19.464 -07 000000626 INF: FPGA: Recv ZSGSRD 35517 17-03-18 06:46:19.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.474 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:19.474 -07 000000561 INF: FPGA: Recv ZPIEZORD 31228 17-03-18 06:46:19.484 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:19.484 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.616 V. Piezo Error = -9.5 V. 17-03-18 06:46:19.484 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.5 um, Read 10 ADC samples: Avg = 35519 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35518 (-167.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35515 (-167.6 uncal um), Max = 35524 (-167.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:46:19.484 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35519, posNoise = 5, negNoise = 4 17-03-18 06:46:19.484 -07 000000610 INF: Z Motor: After move to -0.168487, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:19.484 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 06:46:19.484 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:19.484 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:19.484 -07 000000474 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:19.484 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:19.484 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:19.484 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:19.484 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:19.484 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:19.484 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:19.484 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:19.484 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 06:46:19.484 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:19.494 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 06:46:19.494 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:19.494 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:46:19.494 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:19.504 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 06:46:19.504 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 06:46:19.504 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 06:46:19.504 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 06:46:19.514 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 36983 150\n [Camera] 17-03-18 06:46:19.714 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:20.174 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 660 17-03-18 06:46:20.174 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 660 17-03-18 06:46:20.184 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:20.184 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 660 17-03-18 06:46:20.184 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 660 17-03-18 06:46:20.184 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:20.184 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:20.184 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 06:46:20.184 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:20.184 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start. 17-03-18 06:46:20.374 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36983 851 17-03-18 06:46:20.514 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:20.544 -07 000000625 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.014009, 17-03-18 06:46:20.554 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 373 ms. 17-03-18 06:46:20.554 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 06:46:20.554 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:20.564 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 06:46:20.564 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 06:46:20.564 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:20.564 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:20.564 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 06:46:20.564 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:20.574 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 06:46:20.744 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:20.744 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:20.744 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:20.744 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:20.744 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2619673760, 0x0, 391868352) start. 17-03-18 06:46:20.744 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:20.744 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:20.744 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:20.744 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:20.744 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 06:46:20.934 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:46:20.934 -07 000000474 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:20.934 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 36983 150' command took 2 ms to send, 1416 ms to get response, and 1424 ms overall 17-03-18 06:46:20.934 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 06:46:20.934 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 10 at Y-position 66.5380859375, Z-Position -0.168504943074342. ------ 17-03-18 06:46:20.944 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:46:20.944 -07 000000625 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17538 mm 17-03-18 06:46:20.944 -07 000000625 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:20.944 -07 000000626 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:46:20.944 -07 000000474 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True) 17-03-18 06:46:20.944 -07 000000474 INF: Y Motor: Moving to 67.3826 mm, started at 66.5381 mm, delta = 0.8445 mm 17-03-18 06:46:20.944 -07 000000581 INF: Z Motor: Entering MoveAbsStepped (DAC = 38313, sync = True, waitForSettling = False) 17-03-18 06:46:20.944 -07 000000581 INF: Z Motor: Moving to -0.175386 mm, started at -0.168505 mm, distance = -6.88 um 17-03-18 06:46:20.954 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:20.964 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:20.964 -07 000000626 INF: FPGA: Recv YRDPOS 136270 17-03-18 06:46:20.974 -07 000000581 INF: FPGA: Xmit ZDACW 38313\n [Z Motor] 17-03-18 06:46:20.974 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall 17-03-18 06:46:20.974 -07 000000474 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:20.974 -07 000000474 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:20.974 -07 000000474 INF: Y Motor: Moving 1351 steps-31 17-03-18 06:46:20.974 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 06:46:20.984 -07 000000561 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:46:20.984 -07 000000581 INF: FPGA: 'ZDACW 38313' command took 0 ms to send, 0 ms to get response, and 33 ms overall 17-03-18 06:46:21.004 -07 000000474 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:21.014 -07 000000581 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:21.014 -07 000000626 INF: FPGA: Recv ZDACR 38313 17-03-18 06:46:21.024 -07 000000581 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 39 ms overall 17-03-18 06:46:21.024 -07 000000581 INF: Z Motor: MoveAbsStepped took 73 ms (did NOT wait for settling yet)) 17-03-18 06:46:21.124 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2619673760, 0x0, 391868352) end. Duration was 381 ms. 17-03-18 06:46:21.124 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 06:46:21.124 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:21.124 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 379 ms. 17-03-18 06:46:21.124 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-18 06:46:21.124 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:21.134 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:21.134 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 06:46:21.134 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:21.134 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 06:46:21.184 -07 000000437 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:46:21.184 -07 000000561 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 232 ms overall 17-03-18 06:46:21.374 -07 000000561 INF: FPGA: Recv YMVTILE 17-03-18 06:46:21.374 -07 000000474 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 407 ms overall 17-03-18 06:46:21.444 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:21.454 -07 000000437 INF: FPGA: Recv YRDPOS 137975 17-03-18 06:46:21.464 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:21.464 -07 000000474 INF: Y Motor: Encoder = 137975 = motor step 107793.0 = 67.3706 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:21.464 -07 000000474 INF: Y Motor: Position error before settling (table move) = -25 encoder counts (-0.012 mm) 17-03-18 06:46:21.464 -07 000000474 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 407 ms, distance = 0.845 mm, average velocity = 2.075 mm/sec 17-03-18 06:46:21.894 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:21.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:22.414 -07 000000474 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:22.414 -07 000000461 INF: FPGA: Recv YRDPOS 137975 17-03-18 06:46:22.424 -07 000000474 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:22.424 -07 000000474 INF: Y Motor: Encoder = 137975 = motor step 107793.0 = 67.3706 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:22.454 -07 000000474 INF: Y Motor: After move to 67.382607, error = -0.012001, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:22.454 -07 000000474 INF: Y Motor: Position error after settling (table move) = -25 encoder counts (-0.012 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:22.454 -07 000000474 INF: Y Motor: Moved to 67.3706 after 1506 ms (table move) 17-03-18 06:46:22.454 -07 000000625 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175386 mm (DAC = 38313) 17-03-18 06:46:22.454 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:22.454 -07 000000461 INF: FPGA: Recv ZSGSRD 36590 17-03-18 06:46:22.464 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:46:22.464 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:22.464 -07 000000581 INF: FPGA: Recv ZSGSRD 36587 17-03-18 06:46:22.474 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:22.474 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:22.474 -07 000000626 INF: FPGA: Recv ZSGSRD 36592 17-03-18 06:46:22.484 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:22.484 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:22.484 -07 000000462 INF: FPGA: Recv ZSGSRD 36593 17-03-18 06:46:22.494 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:22.494 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:22.494 -07 000000626 INF: FPGA: Recv ZSGSRD 36585 17-03-18 06:46:22.504 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:22.504 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:22.504 -07 000000462 INF: FPGA: Recv ZSGSRD 36596 17-03-18 06:46:22.514 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:22.514 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:22.514 -07 000000461 INF: FPGA: Recv ZSGSRD 36597 17-03-18 06:46:22.524 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:22.524 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:22.524 -07 000000626 INF: FPGA: Recv ZSGSRD 36593 17-03-18 06:46:22.534 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:22.534 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:22.534 -07 000000474 INF: FPGA: Recv ZSGSRD 36587 17-03-18 06:46:22.544 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:22.544 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:22.544 -07 000000590 INF: FPGA: Recv ZSGSRD 36587 17-03-18 06:46:22.554 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:22.554 -07 000000625 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:22.554 -07 000000581 INF: FPGA: Recv ZPIEZORD 32676 17-03-18 06:46:22.564 -07 000000625 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:22.564 -07 000000625 INF: Z Motor: Piezo is near 49.8 V (nominally 0 to 100 V), expect near 58.5 V, since DAC is at 5.846 V. Piezo Error = -8.7 V. 17-03-18 06:46:22.564 -07 000000625 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.4 um, Read 10 ADC samples: Avg = 36591 (-174.5 uncal um), Error = 0.9 uncal um, Median = 36591 (-174.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36585 (-174.5 uncal um), Max = 36597 (-174.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:46:22.564 -07 000000625 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36591, posNoise = 6, negNoise = 6 17-03-18 06:46:22.564 -07 000000625 INF: Z Motor: After move to -0.175386, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:22.564 -07 000000625 INF: Z Motor: Settle wait time = 1509 ms, measure time = 105 ms (allowed 150 ms), total time = 1614 ms 17-03-18 06:46:22.564 -07 000000625 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:22.614 -07 000000625 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1668 ms 17-03-18 06:46:22.614 -07 000000625 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:22.614 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:22.614 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:22.614 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:22.614 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:22.614 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:46:22.614 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:22.614 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:22.614 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:46:22.624 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms. 17-03-18 06:46:22.624 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:46:22.634 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 15 ms. 17-03-18 06:46:22.634 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 20 ms. 17-03-18 06:46:22.634 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:46:22.684 -07 000000437 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:46:22.984 -07 000000581 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:46:22.984 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:46:22.984 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:46:22.984 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) start. 17-03-18 06:46:23.024 -07 000000626 INF: FPGA: Recv @CAMSNAP 380 17-03-18 06:46:23.024 -07 000000474 INF: FPGA: Recv CAMSNAP 17-03-18 06:46:23.024 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 373 ms to get response, and 384 ms overall 17-03-18 06:46:23.114 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) end. Duration was 126 ms. 17-03-18 06:46:23.114 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:23.114 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 06:46:23.114 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 06:46:23.124 -07 000000625 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:46:23.124 -07 000000581 INF: Autofocus start 17-03-18 06:46:23.124 -07 000000581 INF: MeasureProfile start 17-03-18 06:46:23.124 -07 000000626 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:46:23.134 -07 000000625 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:46:23.134 -07 000000625 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:46:23.134 -07 000000581 INF: MeasureProfile done 17-03-18 06:46:23.134 -07 000000581 INF: X=0 Z correction [um]=-0.0713522 17-03-18 06:46:23.134 -07 000000581 INF: Autofocus finished 17-03-18 06:46:23.334 -07 000000590 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:46:23.334 -07 000000625 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall 17-03-18 06:46:23.334 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37060546875, Z-position -0.17539169849031. ---------- 17-03-18 06:46:23.334 -07 000000610 INF: Cycle 153 Tile 10 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:23.344 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36810, sync = True, waitForSettling = True) 17-03-18 06:46:23.344 -07 000000610 INF: Z Motor: Moving to -0.168505 mm, started at -0.175392 mm, distance = 6.89 um 17-03-18 06:46:23.344 -07 000000610 INF: FPGA: Xmit ZDACW 36810\n [Z Motor] 17-03-18 06:46:23.344 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 06:46:23.354 -07 000000610 INF: FPGA: 'ZDACW 36810' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:23.354 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:23.354 -07 000000461 INF: FPGA: Recv ZDACR 36810 17-03-18 06:46:23.364 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:23.364 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:23.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:23.514 -07 000000437 INF: FPGA: Recv ZSGSRD 35519 17-03-18 06:46:23.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:23.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:23.524 -07 000000561 INF: FPGA: Recv ZSGSRD 35526 17-03-18 06:46:23.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:23.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:23.534 -07 000000590 INF: FPGA: Recv ZSGSRD 35525 17-03-18 06:46:23.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:23.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:23.544 -07 000000625 INF: FPGA: Recv ZSGSRD 35517 17-03-18 06:46:23.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:23.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:23.554 -07 000000461 INF: FPGA: Recv ZSGSRD 35525 17-03-18 06:46:23.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:23.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:23.564 -07 000000581 INF: FPGA: Recv ZSGSRD 35522 17-03-18 06:46:23.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:23.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:23.574 -07 000000474 INF: FPGA: Recv ZSGSRD 35520 17-03-18 06:46:23.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:23.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:23.584 -07 000000462 INF: FPGA: Recv ZSGSRD 35525 17-03-18 06:46:23.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:23.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:23.594 -07 000000590 INF: FPGA: Recv ZSGSRD 35522 17-03-18 06:46:23.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:23.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:23.604 -07 000000474 INF: FPGA: Recv ZSGSRD 35525 17-03-18 06:46:23.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:23.614 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:23.614 -07 000000561 INF: FPGA: Recv ZPIEZORD 31285 17-03-18 06:46:23.624 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:23.624 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.617 V. Piezo Error = -9.3 V. 17-03-18 06:46:23.624 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.5 um, Read 10 ADC samples: Avg = 35523 (-167.7 uncal um), Error = 0.8 uncal um, Median = 35524 (-167.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35517 (-167.6 uncal um), Max = 35526 (-167.7 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:46:23.624 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35523, posNoise = 3, negNoise = 6 17-03-18 06:46:23.624 -07 000000610 INF: Z Motor: After move to -0.168505, error = -0.000025, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:23.624 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-18 06:46:23.624 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:23.624 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:23.624 -07 000000581 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:23.624 -07 000000474 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:23.624 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:23.624 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:23.624 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:23.624 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:23.624 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:23.624 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:23.624 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:23.624 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:23.634 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:46:23.634 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:23.634 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:46:23.634 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:23.634 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 06:46:23.634 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 06:46:23.644 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 06:46:23.644 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms. 17-03-18 06:46:23.644 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 36986 150\n [Camera] 17-03-18 06:46:23.844 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:24.314 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:24.314 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:24.314 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:24.314 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:24.314 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start. 17-03-18 06:46:24.314 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:24.314 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:24.314 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:24.314 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:24.314 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start. 17-03-18 06:46:24.504 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36986 851 17-03-18 06:46:24.654 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:24.694 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 06:46:24.694 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 06:46:24.694 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:24.694 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 06:46:24.694 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-18 06:46:24.694 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:24.694 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:24.694 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:24.694 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 06:46:24.704 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 06:46:24.884 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1228 17-03-18 06:46:24.884 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1228 17-03-18 06:46:24.884 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:24.884 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1228 17-03-18 06:46:24.884 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:24.884 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start. 17-03-18 06:46:24.884 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1228 17-03-18 06:46:24.884 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:24.884 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:24.884 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start. 17-03-18 06:46:25.064 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:46:25.064 -07 000000581 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:25.064 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 36986 150' command took 2 ms to send, 1419 ms to get response, and 1425 ms overall 17-03-18 06:46:25.074 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.168709 17-03-18 06:46:25.074 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16871 mm 17-03-18 06:46:25.074 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:25.074 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True) 17-03-18 06:46:25.074 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 36855, sync = True, waitForSettling = False) 17-03-18 06:46:25.074 -07 000000590 INF: Z Motor: Moving to -0.168711 mm, started at -0.168531 mm, distance = -0.18 um 17-03-18 06:46:25.074 -07 000000590 INF: FPGA: Xmit ZDACW 36855\n [Z Motor] 17-03-18 06:46:25.074 -07 000000626 INF: Y Motor: Moving to 68.2126 mm, started at 67.3706 mm, delta = 0.8420 mm 17-03-18 06:46:25.074 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 06:46:25.084 -07 000000590 INF: FPGA: 'ZDACW 36855' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:46:25.084 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:25.084 -07 000000462 INF: FPGA: Recv ZDACR 36855 17-03-18 06:46:25.094 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:25.094 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:25.094 -07 000000590 INF: Z Motor: MoveAbsStepped took 16 ms (did NOT wait for settling yet)) 17-03-18 06:46:25.094 -07 000000581 INF: FPGA: Recv YRDPOS 137976 17-03-18 06:46:25.104 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall 17-03-18 06:46:25.104 -07 000000626 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:25.104 -07 000000626 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:25.104 -07 000000626 INF: Y Motor: Moving 1346 steps-25 17-03-18 06:46:25.104 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:25.264 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 06:46:25.264 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 06:46:25.264 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:25.264 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 06:46:25.384 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 498 ms. 17-03-18 06:46:25.384 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:25.384 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 122 ms. 17-03-18 06:46:25.384 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:25.384 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 505 ms. 17-03-18 06:46:25.394 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 508 ms. 17-03-18 06:46:25.484 -07 000000474 INF: FPGA: Recv YMVTILE 17-03-18 06:46:25.484 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 374 ms to get response, and 378 ms overall 17-03-18 06:46:25.534 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:25.544 -07 000000581 INF: FPGA: Recv YRDPOS 139681 17-03-18 06:46:25.544 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-18 06:46:25.544 -07 000000626 INF: Y Motor: Encoder = 139681 = motor step 109125.8 = 68.2036 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:25.544 -07 000000626 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm) 17-03-18 06:46:25.544 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.842 mm, average velocity = 2.228 mm/sec 17-03-18 06:46:25.904 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.024884, 17-03-18 06:46:26.494 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:26.494 -07 000000561 INF: FPGA: Recv YRDPOS 139681 17-03-18 06:46:26.504 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.504 -07 000000626 INF: Y Motor: Encoder = 139681 = motor step 109125.8 = 68.2036 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:26.534 -07 000000626 INF: Y Motor: After move to 68.212608, error = -0.008995, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:26.534 -07 000000626 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:26.534 -07 000000626 INF: Y Motor: Moved to 68.2036 after 1459 ms (table move) 17-03-18 06:46:26.534 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168711 mm (DAC = 36855) 17-03-18 06:46:26.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.544 -07 000000461 INF: FPGA: Recv ZSGSRD 35552 17-03-18 06:46:26.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:46:26.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.544 -07 000000461 INF: FPGA: Recv ZSGSRD 35548 17-03-18 06:46:26.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.554 -07 000000461 INF: FPGA: Recv ZSGSRD 35553 17-03-18 06:46:26.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.564 -07 000000581 INF: FPGA: Recv ZSGSRD 35552 17-03-18 06:46:26.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.574 -07 000000626 INF: FPGA: Recv ZSGSRD 35551 17-03-18 06:46:26.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.584 -07 000000461 INF: FPGA: Recv ZSGSRD 35554 17-03-18 06:46:26.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.594 -07 000000626 INF: FPGA: Recv ZSGSRD 35547 17-03-18 06:46:26.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.604 -07 000000461 INF: FPGA: Recv ZSGSRD 35549 17-03-18 06:46:26.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.614 -07 000000561 INF: FPGA: Recv ZSGSRD 35549 17-03-18 06:46:26.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.624 -07 000000581 INF: FPGA: Recv ZSGSRD 35547 17-03-18 06:46:26.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.634 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:26.634 -07 000000581 INF: FPGA: Recv ZPIEZORD 31360 17-03-18 06:46:26.644 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.644 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.624 V. Piezo Error = -9.2 V. 17-03-18 06:46:26.644 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.7 um, Read 10 ADC samples: Avg = 35550 (-167.8 uncal um), Error = 0.9 uncal um, Median = 35550 (-167.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35547 (-167.8 uncal um), Max = 35554 (-167.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 06:46:26.644 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35550, posNoise = 4, negNoise = 3 17-03-18 06:46:26.644 -07 000000610 INF: Z Motor: After move to -0.168711, error = 0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:26.644 -07 000000610 INF: Z Motor: Settle wait time = 1462 ms, measure time = 104 ms (allowed 150 ms), total time = 1566 ms 17-03-18 06:46:26.644 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:26.694 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1618 ms 17-03-18 06:46:26.694 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:26.694 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20361328125, Z-position -0.168704093650737. ---------- 17-03-18 06:46:26.694 -07 000000610 INF: Cycle 153 Tile 11 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:26.694 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36678, sync = True, waitForSettling = True) 17-03-18 06:46:26.694 -07 000000610 INF: Z Motor: Moving to -0.167901 mm, started at -0.168704 mm, distance = 0.80 um 17-03-18 06:46:26.694 -07 000000610 INF: FPGA: Xmit ZDACW 36678\n [Z Motor] 17-03-18 06:46:26.694 -07 000000461 INF: FPGA: Recv ZDACW 17-03-18 06:46:26.704 -07 000000610 INF: FPGA: 'ZDACW 36678' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:46:26.704 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:26.704 -07 000000581 INF: FPGA: Recv ZDACR 36678 17-03-18 06:46:26.714 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.714 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:26.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.864 -07 000000626 INF: FPGA: Recv ZSGSRD 35428 17-03-18 06:46:26.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.874 -07 000000561 INF: FPGA: Recv ZSGSRD 35424 17-03-18 06:46:26.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.884 -07 000000561 INF: FPGA: Recv ZSGSRD 35425 17-03-18 06:46:26.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.894 -07 000000581 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:26.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:26.894 -07 000000626 INF: FPGA: Recv ZSGSRD 35429 17-03-18 06:46:26.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.904 -07 000000461 INF: FPGA: Recv ZSGSRD 35419 17-03-18 06:46:26.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.914 -07 000000480 INF: FPGA: Recv ZSGSRD 35433 17-03-18 06:46:26.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.924 -07 000000487 INF: FPGA: Recv ZSGSRD 35425 17-03-18 06:46:26.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.934 -07 000000626 INF: FPGA: Recv ZSGSRD 35420 17-03-18 06:46:26.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.944 -07 000000487 INF: FPGA: Recv ZSGSRD 35424 17-03-18 06:46:26.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:26.954 -07 000000480 INF: FPGA: Recv ZSGSRD 35420 17-03-18 06:46:26.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.964 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:26.964 -07 000000461 INF: FPGA: Recv ZPIEZORD 31132 17-03-18 06:46:26.974 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:26.974 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.597 V. Piezo Error = -9.5 V. 17-03-18 06:46:26.974 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35425 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35424 (-167.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35419 (-167.0 uncal um), Max = 35433 (-167.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:46:26.974 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35425, posNoise = 8, negNoise = 6 17-03-18 06:46:26.974 -07 000000610 INF: Z Motor: After move to -0.167901, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:26.974 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 06:46:26.974 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:26.974 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:26.974 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:26.974 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:26.974 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:26.974 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:26.974 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:26.974 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:26.974 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 06:46:26.974 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:26.974 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:26.974 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:26.974 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:46:26.984 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:46:26.984 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:26.984 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:26.984 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 06:46:26.984 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms. 17-03-18 06:46:26.984 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 06:46:26.984 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 06:46:26.994 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 36855 150\n [Camera] 17-03-18 06:46:27.194 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:27.664 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:27.664 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:27.664 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:27.664 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:27.664 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:27.664 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:27.664 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:27.664 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-18 06:46:27.664 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:27.664 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 06:46:27.854 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36855 851 17-03-18 06:46:28.004 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:28.034 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 06:46:28.034 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms. 17-03-18 06:46:28.034 -07 000000461 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:28.044 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 370 ms. 17-03-18 06:46:28.044 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 06:46:28.044 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:28.044 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:28.044 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 06:46:28.044 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:28.054 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 06:46:28.224 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:28.224 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:28.224 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:28.234 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:28.234 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:28.234 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:28.234 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:28.234 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start. 17-03-18 06:46:28.234 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:28.234 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start. 17-03-18 06:46:28.414 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:46:28.414 -07 000000447 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:28.414 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 36855 150' command took 2 ms to send, 1419 ms to get response, and 1425 ms overall 17-03-18 06:46:28.424 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.168554 17-03-18 06:46:28.424 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.16855 mm 17-03-18 06:46:28.424 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:28.424 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True) 17-03-18 06:46:28.424 -07 000000561 INF: Y Motor: Moving to 69.0426 mm, started at 68.2036 mm, delta = 0.8390 mm 17-03-18 06:46:28.424 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:28.424 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 36821, sync = True, waitForSettling = False) 17-03-18 06:46:28.424 -07 000000480 INF: Z Motor: Moving to -0.168556 mm, started at -0.167901 mm, distance = -0.65 um 17-03-18 06:46:28.424 -07 000000487 INF: FPGA: Recv YRDPOS 139681 17-03-18 06:46:28.434 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:46:28.434 -07 000000561 INF: Y Motor: Encoder = 139681 = motor step 109125.8 = 68.2036 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:28.434 -07 000000561 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:28.434 -07 000000561 INF: Y Motor: Moving 1342 steps-18 17-03-18 06:46:28.434 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:28.444 -07 000000480 INF: FPGA: Xmit ZDACW 36821\n [Z Motor] 17-03-18 06:46:28.444 -07 000000581 INF: FPGA: Recv ZDACW 17-03-18 06:46:28.454 -07 000000480 INF: FPGA: 'ZDACW 36821' command took 0 ms to send, 0 ms to get response, and 23 ms overall 17-03-18 06:46:28.454 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:28.454 -07 000000581 INF: FPGA: Recv ZDACR 36821 17-03-18 06:46:28.464 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:28.464 -07 000000480 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet)) 17-03-18 06:46:28.624 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 394 ms. 17-03-18 06:46:28.624 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-18 06:46:28.624 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:28.634 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 394 ms. 17-03-18 06:46:28.634 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-18 06:46:28.634 -07 000000461 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:28.634 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:28.634 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-18 06:46:28.634 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:28.644 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms. 17-03-18 06:46:28.804 -07 000000626 INF: FPGA: Recv YMVTILE 17-03-18 06:46:28.804 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall 17-03-18 06:46:28.864 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:28.864 -07 000000447 INF: FPGA: Recv YRDPOS 141365 17-03-18 06:46:28.874 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:28.874 -07 000000561 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:28.874 -07 000000561 INF: Y Motor: Position error before settling (table move) = -34 encoder counts (-0.017 mm) 17-03-18 06:46:28.874 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.839 mm, average velocity = 2.220 mm/sec 17-03-18 06:46:29.824 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:29.824 -07 000000581 INF: FPGA: Recv YRDPOS 141365 17-03-18 06:46:29.834 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:29.834 -07 000000561 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:29.864 -07 000000561 INF: Y Motor: After move to 69.042610, error = -0.016731, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:29.864 -07 000000561 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:29.864 -07 000000561 INF: Y Motor: Moved to 69.0259 after 1438 ms (table move) 17-03-18 06:46:29.864 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168556 mm (DAC = 36821) 17-03-18 06:46:29.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:29.864 -07 000000581 INF: FPGA: Recv ZSGSRD 35531 17-03-18 06:46:29.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 06:46:29.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:29.874 -07 000000461 INF: FPGA: Recv ZSGSRD 35524 17-03-18 06:46:29.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:29.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:29.884 -07 000000581 INF: FPGA: Recv ZSGSRD 35520 17-03-18 06:46:29.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:29.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:29.894 -07 000000461 INF: FPGA: Recv ZSGSRD 35525 17-03-18 06:46:29.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:29.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:29.904 -07 000000581 INF: FPGA: Recv ZSGSRD 35530 17-03-18 06:46:29.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:29.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:29.914 -07 000000561 INF: FPGA: Recv ZSGSRD 35531 17-03-18 06:46:29.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:29.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:29.924 -07 000000461 INF: FPGA: Recv ZSGSRD 35531 17-03-18 06:46:29.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:29.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:29.934 -07 000000480 INF: FPGA: Recv ZSGSRD 35527 17-03-18 06:46:29.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:29.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:29.944 -07 000000626 INF: FPGA: Recv ZSGSRD 35528 17-03-18 06:46:29.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:29.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:29.954 -07 000000480 INF: FPGA: Recv ZSGSRD 35527 17-03-18 06:46:29.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:29.964 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:29.964 -07 000000626 INF: FPGA: Recv ZPIEZORD 31305 17-03-18 06:46:29.974 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:29.974 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.619 V. Piezo Error = -9.3 V. 17-03-18 06:46:29.974 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35527 (-167.7 uncal um), Error = 0.9 uncal um, Median = 35528 (-167.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35520 (-167.6 uncal um), Max = 35531 (-167.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 06:46:29.974 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35527, posNoise = 4, negNoise = 7 17-03-18 06:46:29.974 -07 000000610 INF: Z Motor: After move to -0.168556, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:29.974 -07 000000610 INF: Z Motor: Settle wait time = 1440 ms, measure time = 104 ms (allowed 150 ms), total time = 1544 ms 17-03-18 06:46:29.974 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:30.024 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms 17-03-18 06:46:30.024 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:30.024 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02587890625, Z-position -0.168556336771476. ---------- 17-03-18 06:46:30.024 -07 000000610 INF: Cycle 153 Tile 12 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:30.024 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36644, sync = True, waitForSettling = True) 17-03-18 06:46:30.024 -07 000000610 INF: Z Motor: Moving to -0.167745 mm, started at -0.168556 mm, distance = 0.81 um 17-03-18 06:46:30.024 -07 000000610 INF: FPGA: Xmit ZDACW 36644\n [Z Motor] 17-03-18 06:46:30.024 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 06:46:30.034 -07 000000610 INF: FPGA: 'ZDACW 36644' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:46:30.034 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:30.034 -07 000000626 INF: FPGA: Recv ZDACR 36644 17-03-18 06:46:30.044 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:30.044 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:30.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:30.194 -07 000000591 INF: FPGA: Recv ZSGSRD 35398 17-03-18 06:46:30.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:30.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:30.204 -07 000000581 INF: FPGA: Recv ZSGSRD 35410 17-03-18 06:46:30.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:30.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:30.214 -07 000000487 INF: FPGA: Recv ZSGSRD 35395 17-03-18 06:46:30.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:30.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:30.224 -07 000000480 INF: FPGA: Recv ZSGSRD 35405 17-03-18 06:46:30.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:30.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:30.234 -07 000000480 INF: FPGA: Recv ZSGSRD 35407 17-03-18 06:46:30.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:30.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:30.244 -07 000000487 INF: FPGA: Recv ZSGSRD 35403 17-03-18 06:46:30.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:30.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:30.254 -07 000000487 INF: FPGA: Recv ZSGSRD 35403 17-03-18 06:46:30.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:30.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:30.264 -07 000000480 INF: FPGA: Recv ZSGSRD 35397 17-03-18 06:46:30.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:30.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:30.274 -07 000000480 INF: FPGA: Recv ZSGSRD 35404 17-03-18 06:46:30.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:30.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:30.284 -07 000000487 INF: FPGA: Recv ZSGSRD 35404 17-03-18 06:46:30.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:30.294 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:30.294 -07 000000487 INF: FPGA: Recv ZPIEZORD 31119 17-03-18 06:46:30.304 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:30.304 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.592 V. Piezo Error = -9.4 V. 17-03-18 06:46:30.304 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.7 um, Read 10 ADC samples: Avg = 35403 (-166.9 uncal um), Error = 0.9 uncal um, Median = 35404 (-166.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35395 (-166.8 uncal um), Max = 35410 (-166.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 06:46:30.304 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35403, posNoise = 7, negNoise = 8 17-03-18 06:46:30.304 -07 000000610 INF: Z Motor: After move to -0.167745, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:30.304 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 06:46:30.304 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:30.304 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:30.304 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:30.304 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:30.304 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:30.304 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:30.304 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:30.304 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:30.304 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:30.304 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:30.304 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:30.304 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:30.314 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:46:30.314 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:30.314 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:46:30.314 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:30.324 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 06:46:30.324 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 06:46:30.324 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 06:46:30.324 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:46:30.334 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 36821 150\n [Camera] 17-03-18 06:46:30.524 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:30.994 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 662 17-03-18 06:46:31.004 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 662 17-03-18 06:46:31.004 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:31.004 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 662 17-03-18 06:46:31.004 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 662 17-03-18 06:46:31.004 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:31.124 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:31.124 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-18 06:46:31.124 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:31.124 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:46:31.494 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 374 ms. 17-03-18 06:46:31.494 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 369 ms. 17-03-18 06:46:31.494 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms. 17-03-18 06:46:31.494 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:31.494 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms. 17-03-18 06:46:31.494 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:31.504 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:46:31.504 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:46:31.504 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 500 ms. 17-03-18 06:46:31.504 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 503 ms. 17-03-18 06:46:31.514 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36821 851 17-03-18 06:46:31.514 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:31.514 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.030322, 17-03-18 06:46:31.564 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:31.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:31.564 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:31.564 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:31.564 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:31.564 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:31.564 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:31.564 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start. 17-03-18 06:46:31.574 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:31.574 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start. 17-03-18 06:46:31.754 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:46:31.754 -07 000000455 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:31.754 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 36821 150' command took 2 ms to send, 1414 ms to get response, and 1424 ms overall 17-03-18 06:46:31.754 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.167969 17-03-18 06:46:31.754 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16797 mm 17-03-18 06:46:31.754 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:31.764 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 36693, sync = True, waitForSettling = False) 17-03-18 06:46:31.764 -07 000000455 INF: Z Motor: Moving to -0.167970 mm, started at -0.167760 mm, distance = -0.21 um 17-03-18 06:46:31.764 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True) 17-03-18 06:46:31.764 -07 000000480 INF: Y Motor: Moving to 69.8726 mm, started at 69.0259 mm, delta = 0.8467 mm 17-03-18 06:46:31.764 -07 000000455 INF: FPGA: Xmit ZDACW 36693\n [Z Motor] 17-03-18 06:46:31.764 -07 000000487 INF: FPGA: Recv ZDACW 17-03-18 06:46:31.774 -07 000000455 INF: FPGA: 'ZDACW 36693' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:46:31.774 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:31.774 -07 000000474 INF: FPGA: Recv YRDPOS 141365 17-03-18 06:46:31.784 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 17 ms overall 17-03-18 06:46:31.784 -07 000000480 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:31.784 -07 000000480 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:31.784 -07 000000480 INF: Y Motor: Moving 1355 steps-34 17-03-18 06:46:31.784 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:31.784 -07 000000461 INF: FPGA: Recv ZDACR 36693 17-03-18 06:46:31.794 -07 000000455 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:46:31.794 -07 000000455 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet)) 17-03-18 06:46:31.794 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:31.894 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:31.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:31.944 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 06:46:31.944 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 06:46:31.944 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:31.954 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 06:46:31.954 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms. 17-03-18 06:46:31.954 -07 000000590 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:31.954 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:31.954 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-18 06:46:31.954 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:31.964 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-18 06:46:32.164 -07 000000455 INF: FPGA: Recv YMVTILE 17-03-18 06:46:32.164 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 06:46:32.224 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:32.224 -07 000000487 INF: FPGA: Recv YRDPOS 143077 17-03-18 06:46:32.234 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:46:32.234 -07 000000480 INF: Y Motor: Encoder = 143077 = motor step 111778.9 = 69.8618 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:32.234 -07 000000480 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm) 17-03-18 06:46:32.234 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.847 mm, average velocity = 2.182 mm/sec 17-03-18 06:46:33.184 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:33.184 -07 000000590 INF: FPGA: Recv YRDPOS 143077 17-03-18 06:46:33.194 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:33.194 -07 000000480 INF: Y Motor: Encoder = 143077 = motor step 111778.9 = 69.8618 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:33.224 -07 000000480 INF: Y Motor: After move to 69.872612, error = -0.010796, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:33.224 -07 000000480 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:33.224 -07 000000480 INF: Y Motor: Moved to 69.8618 after 1461 ms (table move) 17-03-18 06:46:33.224 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167970 mm (DAC = 36693) 17-03-18 06:46:33.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:33.224 -07 000000480 INF: FPGA: Recv ZSGSRD 35435 17-03-18 06:46:33.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:46:33.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:33.234 -07 000000480 INF: FPGA: Recv ZSGSRD 35440 17-03-18 06:46:33.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:33.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:33.244 -07 000000480 INF: FPGA: Recv ZSGSRD 35431 17-03-18 06:46:33.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:33.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:33.254 -07 000000480 INF: FPGA: Recv ZSGSRD 35435 17-03-18 06:46:33.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:33.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:33.264 -07 000000480 INF: FPGA: Recv ZSGSRD 35438 17-03-18 06:46:33.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:33.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:33.274 -07 000000480 INF: FPGA: Recv ZSGSRD 35435 17-03-18 06:46:33.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:33.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:33.284 -07 000000480 INF: FPGA: Recv ZSGSRD 35441 17-03-18 06:46:33.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:33.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:33.294 -07 000000461 INF: FPGA: Recv ZSGSRD 35434 17-03-18 06:46:33.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:33.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:33.304 -07 000000480 INF: FPGA: Recv ZSGSRD 35445 17-03-18 06:46:33.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:33.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:33.314 -07 000000461 INF: FPGA: Recv ZSGSRD 35437 17-03-18 06:46:33.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:33.324 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:33.324 -07 000000461 INF: FPGA: Recv ZPIEZORD 31159 17-03-18 06:46:33.334 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:33.334 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.599 V. Piezo Error = -9.4 V. 17-03-18 06:46:33.334 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.0 um, Read 10 ADC samples: Avg = 35437 (-167.1 uncal um), Error = 0.9 uncal um, Median = 35436 (-167.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35431 (-167.1 uncal um), Max = 35445 (-167.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:46:33.334 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35437, posNoise = 8, negNoise = 6 17-03-18 06:46:33.334 -07 000000610 INF: Z Motor: After move to -0.167970, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:33.334 -07 000000610 INF: Z Motor: Settle wait time = 1464 ms, measure time = 104 ms (allowed 150 ms), total time = 1568 ms 17-03-18 06:46:33.334 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:33.384 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1622 ms 17-03-18 06:46:33.384 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:33.384 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86181640625, Z-position -0.167978157678718. ---------- 17-03-18 06:46:33.384 -07 000000610 INF: Cycle 153 Tile 13 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:33.384 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36516, sync = True, waitForSettling = True) 17-03-18 06:46:33.384 -07 000000610 INF: Z Motor: Moving to -0.167160 mm, started at -0.167978 mm, distance = 0.82 um 17-03-18 06:46:33.384 -07 000000610 INF: FPGA: Xmit ZDACW 36516\n [Z Motor] 17-03-18 06:46:33.384 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 06:46:33.394 -07 000000610 INF: FPGA: 'ZDACW 36516' command took 1 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:46:33.394 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:34.314 -07 000000474 INF: FPGA: Recv ZDACR 36516 17-03-18 06:46:34.314 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 915 ms to get response, and 924 ms overall 17-03-18 06:46:34.314 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:34.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:34.464 -07 000000455 INF: FPGA: Recv ZSGSRD 35310 17-03-18 06:46:34.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:34.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:34.474 -07 000000480 INF: FPGA: Recv ZSGSRD 35316 17-03-18 06:46:34.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:34.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:34.484 -07 000000437 INF: FPGA: Recv ZSGSRD 35311 17-03-18 06:46:34.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:34.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:34.494 -07 000000590 INF: FPGA: Recv ZSGSRD 35307 17-03-18 06:46:34.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:34.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:34.504 -07 000000625 INF: FPGA: Recv ZSGSRD 35311 17-03-18 06:46:34.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:34.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:34.514 -07 000000480 INF: FPGA: Recv ZSGSRD 35312 17-03-18 06:46:34.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:34.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:34.524 -07 000000455 INF: FPGA: Recv ZSGSRD 35310 17-03-18 06:46:34.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:34.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:34.534 -07 000000474 INF: FPGA: Recv ZSGSRD 35307 17-03-18 06:46:34.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:34.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:34.544 -07 000000437 INF: FPGA: Recv ZSGSRD 35309 17-03-18 06:46:34.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:34.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:34.554 -07 000000590 INF: FPGA: Recv ZSGSRD 35310 17-03-18 06:46:34.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:34.564 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:34.564 -07 000000455 INF: FPGA: Recv ZPIEZORD 31028 17-03-18 06:46:34.574 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:34.574 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.572 V. Piezo Error = -9.4 V. 17-03-18 06:46:34.574 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.2 um, Read 10 ADC samples: Avg = 35310 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35310 (-166.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35307 (-166.3 uncal um), Max = 35316 (-166.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 06:46:34.574 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35310, posNoise = 6, negNoise = 3 17-03-18 06:46:34.574 -07 000000610 INF: Z Motor: After move to -0.167160, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:34.574 -07 000000610 INF: Z Motor: MoveAbsStepped took 1185 ms) 17-03-18 06:46:34.574 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:34.574 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:34.574 -07 000000474 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:34.574 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:34.574 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:34.574 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:34.574 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:34.574 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:34.574 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 06:46:34.574 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 06:46:34.574 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:34.574 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:34.584 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:46:34.584 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:34.584 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:46:34.584 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:34.594 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 06:46:34.594 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 06:46:34.594 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 06:46:34.594 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 06:46:34.594 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 36693 150\n [Camera] 17-03-18 06:46:34.794 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:35.254 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:35.254 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:35.264 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:35.264 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:35.264 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:35.264 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:35.264 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:35.264 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start. 17-03-18 06:46:35.264 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:35.264 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-18 06:46:35.454 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36693 851 17-03-18 06:46:35.604 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:35.644 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 06:46:35.644 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-18 06:46:35.644 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:35.644 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 06:46:35.644 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms. 17-03-18 06:46:35.644 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:35.644 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:35.644 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-18 06:46:35.654 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:35.654 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-18 06:46:35.824 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:35.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:35.824 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:35.824 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:35.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:35.944 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:35.944 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start. 17-03-18 06:46:35.944 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:35.944 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:35.944 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:46:36.014 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:46:36.014 -07 000000626 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:36.014 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 36693 150' command took 2 ms to send, 1418 ms to get response, and 1425 ms overall 17-03-18 06:46:36.024 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 06:46:36.024 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 14 at Y-position 69.86181640625, Z-Position -0.167162282736714. ------ 17-03-18 06:46:36.024 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:46:36.024 -07 000000455 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.17350 mm 17-03-18 06:46:36.024 -07 000000455 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:36.024 -07 000000474 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:46:36.034 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:46:36.034 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 37901, sync = True, waitForSettling = False) 17-03-18 06:46:36.034 -07 000000626 INF: Z Motor: Moving to -0.173500 mm, started at -0.167162 mm, distance = -6.34 um 17-03-18 06:46:36.034 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True) 17-03-18 06:46:36.034 -07 000000480 INF: Y Motor: Moving to 70.7026 mm, started at 69.8618 mm, delta = 0.8408 mm 17-03-18 06:46:36.034 -07 000000462 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:46:36.044 -07 000000626 INF: FPGA: Xmit ZDACW 37901\n [Z Motor] 17-03-18 06:46:36.044 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 06:46:36.054 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:36.054 -07 000000626 INF: FPGA: 'ZDACW 37901' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:46:36.054 -07 000000474 INF: FPGA: Recv YRDPOS 143077 17-03-18 06:46:36.064 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:46:36.064 -07 000000480 INF: Y Motor: Encoder = 143077 = motor step 111778.9 = 69.8618 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:36.064 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:36.064 -07 000000480 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:36.064 -07 000000480 INF: Y Motor: Moving 1345 steps-22 17-03-18 06:46:36.064 -07 000000474 INF: FPGA: Recv ZDACR 37901 17-03-18 06:46:36.074 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:46:36.074 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:36.074 -07 000000626 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet)) 17-03-18 06:46:36.234 -07 000000590 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:46:36.234 -07 000000462 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 203 ms overall 17-03-18 06:46:36.324 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 382 ms. 17-03-18 06:46:36.324 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 06:46:36.324 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:36.324 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 380 ms. 17-03-18 06:46:36.324 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-18 06:46:36.324 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:36.324 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:36.324 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 501 ms. 17-03-18 06:46:36.324 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:36.334 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 06:46:36.444 -07 000000625 INF: FPGA: Recv YMVTILE 17-03-18 06:46:36.444 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall 17-03-18 06:46:36.504 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:36.504 -07 000000626 INF: FPGA: Recv YRDPOS 144768 17-03-18 06:46:36.514 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:36.514 -07 000000480 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:36.514 -07 000000480 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 06:46:36.514 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.841 mm, average velocity = 2.173 mm/sec 17-03-18 06:46:36.874 -07 000000581 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.014009, 17-03-18 06:46:36.894 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:36.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:37.464 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:37.464 -07 000000462 INF: FPGA: Recv YRDPOS 144768 17-03-18 06:46:37.474 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:37.474 -07 000000480 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:37.504 -07 000000480 INF: Y Motor: After move to 70.702606, error = -0.015106, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:37.504 -07 000000480 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:37.504 -07 000000480 INF: Y Motor: Moved to 70.6875 after 1473 ms (table move) 17-03-18 06:46:37.504 -07 000000455 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173500 mm (DAC = 37901) 17-03-18 06:46:37.504 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:37.514 -07 000000590 INF: FPGA: Recv ZSGSRD 36307 17-03-18 06:46:37.514 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 06:46:37.514 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:37.514 -07 000000590 INF: FPGA: Recv ZSGSRD 36297 17-03-18 06:46:37.524 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:37.524 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:37.524 -07 000000462 INF: FPGA: Recv ZSGSRD 36292 17-03-18 06:46:37.534 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:37.534 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:37.534 -07 000000625 INF: FPGA: Recv ZSGSRD 36296 17-03-18 06:46:37.544 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:37.544 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:37.544 -07 000000487 INF: FPGA: Recv ZSGSRD 36292 17-03-18 06:46:37.554 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:37.554 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:37.554 -07 000000625 INF: FPGA: Recv ZSGSRD 36306 17-03-18 06:46:37.564 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:37.564 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:37.564 -07 000000480 INF: FPGA: Recv ZSGSRD 36298 17-03-18 06:46:37.574 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:37.574 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:37.574 -07 000000590 INF: FPGA: Recv ZSGSRD 36300 17-03-18 06:46:37.584 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:37.584 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:37.584 -07 000000462 INF: FPGA: Recv ZSGSRD 36300 17-03-18 06:46:37.594 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:37.594 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:37.594 -07 000000590 INF: FPGA: Recv ZSGSRD 36298 17-03-18 06:46:37.604 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:37.604 -07 000000455 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:37.604 -07 000000474 INF: FPGA: Recv ZPIEZORD 32356 17-03-18 06:46:37.614 -07 000000455 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:37.614 -07 000000455 INF: Z Motor: Piezo is near 49.1 V (nominally 0 to 100 V), expect near 57.8 V, since DAC is at 5.783 V. Piezo Error = -8.7 V. 17-03-18 06:46:37.614 -07 000000455 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.5 um, Read 10 ADC samples: Avg = 36299 (-172.6 uncal um), Error = 0.9 uncal um, Median = 36298 (-172.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 36292 (-172.6 uncal um), Max = 36307 (-172.7 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 06:46:37.614 -07 000000455 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36299, posNoise = 8, negNoise = 7 17-03-18 06:46:37.614 -07 000000455 INF: Z Motor: After move to -0.173500, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:37.614 -07 000000455 INF: Z Motor: Settle wait time = 1476 ms, measure time = 104 ms (allowed 150 ms), total time = 1580 ms 17-03-18 06:46:37.614 -07 000000455 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:37.664 -07 000000455 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1634 ms 17-03-18 06:46:37.664 -07 000000455 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:37.664 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:37.664 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:37.664 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:37.664 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:37.664 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:46:37.664 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:37.664 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:37.664 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:46:37.674 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 06:46:37.674 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:46:37.684 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-18 06:46:37.684 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms. 17-03-18 06:46:37.684 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:46:37.734 -07 000000581 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:46:38.034 -07 000000480 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:46:38.034 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:46:38.034 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:46:38.034 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) start. 17-03-18 06:46:38.064 -07 000000487 INF: FPGA: Recv @CAMSNAP 380 17-03-18 06:46:38.074 -07 000000626 INF: FPGA: Recv CAMSNAP 17-03-18 06:46:38.074 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall 17-03-18 06:46:38.144 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) end. Duration was 114 ms. 17-03-18 06:46:38.144 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:38.154 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 06:46:38.154 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms. 17-03-18 06:46:38.174 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:46:38.174 -07 000000487 INF: Autofocus start 17-03-18 06:46:38.174 -07 000000487 INF: MeasureProfile start 17-03-18 06:46:38.174 -07 000000626 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:46:38.184 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:46:38.184 -07 000000462 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:46:38.184 -07 000000487 INF: MeasureProfile done 17-03-18 06:46:38.184 -07 000000487 INF: X=80 Z correction [um]=0.337546 17-03-18 06:46:38.184 -07 000000487 INF: Autofocus finished 17-03-18 06:46:38.384 -07 000000625 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:46:38.384 -07 000000462 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 06:46:38.384 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6875, Z-position -0.173515828544916. ---------- 17-03-18 06:46:38.384 -07 000000610 INF: Cycle 153 Tile 14 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:38.394 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36488, sync = True, waitForSettling = True) 17-03-18 06:46:38.394 -07 000000610 INF: Z Motor: Moving to -0.167031 mm, started at -0.173516 mm, distance = 6.48 um 17-03-18 06:46:38.394 -07 000000610 INF: FPGA: Xmit ZDACW 36488\n [Z Motor] 17-03-18 06:46:38.394 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 06:46:38.404 -07 000000610 INF: FPGA: 'ZDACW 36488' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.404 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:38.404 -07 000000480 INF: FPGA: Recv ZDACR 36488 17-03-18 06:46:38.414 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.414 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:38.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:38.564 -07 000000480 INF: FPGA: Recv ZSGSRD 35292 17-03-18 06:46:38.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:38.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:38.574 -07 000000455 INF: FPGA: Recv ZSGSRD 35291 17-03-18 06:46:38.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:38.584 -07 000000455 INF: FPGA: Recv ZSGSRD 35289 17-03-18 06:46:38.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:38.594 -07 000000487 INF: FPGA: Recv ZSGSRD 35294 17-03-18 06:46:38.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:38.604 -07 000000581 INF: FPGA: Recv ZSGSRD 35293 17-03-18 06:46:38.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:38.614 -07 000000487 INF: FPGA: Recv ZSGSRD 35294 17-03-18 06:46:38.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:38.624 -07 000000480 INF: FPGA: Recv ZSGSRD 35287 17-03-18 06:46:38.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:38.634 -07 000000487 INF: FPGA: Recv ZSGSRD 35293 17-03-18 06:46:38.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:38.644 -07 000000462 INF: FPGA: Recv ZSGSRD 35292 17-03-18 06:46:38.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:38.654 -07 000000474 INF: FPGA: Recv ZSGSRD 35285 17-03-18 06:46:38.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.664 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:38.664 -07 000000447 INF: FPGA: Recv ZPIEZORD 31022 17-03-18 06:46:38.674 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:38.674 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.568 V. Piezo Error = -9.4 V. 17-03-18 06:46:38.674 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35291 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35292 (-166.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35285 (-166.1 uncal um), Max = 35294 (-166.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:46:38.674 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35291, posNoise = 3, negNoise = 6 17-03-18 06:46:38.674 -07 000000610 INF: Z Motor: After move to -0.167031, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:38.674 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms) 17-03-18 06:46:38.674 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:38.674 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:38.674 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:38.674 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:38.674 -07 000000581 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:38.674 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:38.674 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:38.674 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:38.674 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:38.674 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:38.674 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:38.674 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:38.684 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:46:38.684 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:38.684 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:46:38.684 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:38.694 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 06:46:38.694 -07 000000581 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 06:46:38.694 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 06:46:38.694 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 06:46:38.694 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 36664 150\n [Camera] 17-03-18 06:46:38.894 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:39.364 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:39.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:39.364 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:39.364 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:39.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:39.364 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:39.364 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:39.364 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start. 17-03-18 06:46:39.374 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:39.374 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start. 17-03-18 06:46:39.554 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36664 851 17-03-18 06:46:39.704 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:39.734 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 368 ms. 17-03-18 06:46:39.734 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms. 17-03-18 06:46:39.734 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:39.744 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:39.744 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 375 ms. 17-03-18 06:46:39.744 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-18 06:46:39.744 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:39.744 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:39.744 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 06:46:39.744 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-18 06:46:39.924 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:39.924 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:39.924 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:39.934 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:39.934 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:39.934 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:39.934 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:39.934 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start. 17-03-18 06:46:39.934 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:39.934 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-18 06:46:40.114 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:46:40.114 -07 000000590 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:40.114 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 36664 150' command took 2 ms to send, 1419 ms to get response, and 1426 ms overall 17-03-18 06:46:40.124 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.167884 17-03-18 06:46:40.124 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16788 mm 17-03-18 06:46:40.124 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:40.234 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True) 17-03-18 06:46:40.234 -07 000000626 INF: Y Motor: Moving to 71.5326 mm, started at 70.6875 mm, delta = 0.8451 mm 17-03-18 06:46:40.234 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:40.234 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 36674, sync = True, waitForSettling = False) 17-03-18 06:46:40.234 -07 000000447 INF: Z Motor: Moving to -0.167883 mm, started at -0.167040 mm, distance = -0.84 um 17-03-18 06:46:40.234 -07 000000590 INF: FPGA: Recv YRDPOS 144768 17-03-18 06:46:40.244 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:46:40.244 -07 000000626 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:40.244 -07 000000626 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:40.244 -07 000000626 INF: Y Motor: Moving 1352 steps-31 17-03-18 06:46:40.244 -07 000000447 INF: FPGA: Xmit ZDACW 36674\n [Z Motor] 17-03-18 06:46:40.244 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 06:46:40.254 -07 000000447 INF: FPGA: 'ZDACW 36674' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 06:46:40.254 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:40.254 -07 000000590 INF: FPGA: Recv ZDACR 36674 17-03-18 06:46:40.264 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:40.264 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:40.264 -07 000000447 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet)) 17-03-18 06:46:40.324 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 387 ms. 17-03-18 06:46:40.324 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-18 06:46:40.324 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:40.324 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 386 ms. 17-03-18 06:46:40.324 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 06:46:40.324 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:40.324 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:40.324 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-18 06:46:40.334 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:40.334 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 405 ms. 17-03-18 06:46:40.634 -07 000000447 INF: FPGA: Recv YMVTILE 17-03-18 06:46:40.634 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 06:46:40.694 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:40.694 -07 000000474 INF: FPGA: Recv YRDPOS 146468 17-03-18 06:46:40.704 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:40.704 -07 000000626 INF: Y Motor: Encoder = 146468 = motor step 114428.1 = 71.5176 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:40.704 -07 000000626 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 06:46:40.704 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.129 mm/sec 17-03-18 06:46:41.654 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:41.654 -07 000000590 INF: FPGA: Recv YRDPOS 146468 17-03-18 06:46:41.664 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:41.664 -07 000000626 INF: Y Motor: Encoder = 146468 = motor step 114428.1 = 71.5176 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:41.694 -07 000000626 INF: Y Motor: After move to 71.532608, error = -0.015030, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:41.694 -07 000000626 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:41.694 -07 000000626 INF: Y Motor: Moved to 71.5176 after 1458 ms (table move) 17-03-18 06:46:41.694 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167883 mm (DAC = 36674) 17-03-18 06:46:41.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:41.704 -07 000000590 INF: FPGA: Recv ZSGSRD 35426 17-03-18 06:46:41.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:46:41.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:41.704 -07 000000474 INF: FPGA: Recv ZSGSRD 35426 17-03-18 06:46:41.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:41.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:41.714 -07 000000480 INF: FPGA: Recv ZSGSRD 35423 17-03-18 06:46:41.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:41.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:41.724 -07 000000626 INF: FPGA: Recv ZSGSRD 35419 17-03-18 06:46:41.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:41.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:41.734 -07 000000626 INF: FPGA: Recv ZSGSRD 35420 17-03-18 06:46:41.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:41.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:41.744 -07 000000480 INF: FPGA: Recv ZSGSRD 35422 17-03-18 06:46:41.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:41.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:41.754 -07 000000447 INF: FPGA: Recv ZSGSRD 35420 17-03-18 06:46:41.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:41.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:41.764 -07 000000590 INF: FPGA: Recv ZSGSRD 35424 17-03-18 06:46:41.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:41.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:41.774 -07 000000626 INF: FPGA: Recv ZSGSRD 35430 17-03-18 06:46:41.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:41.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:41.784 -07 000000590 INF: FPGA: Recv ZSGSRD 35429 17-03-18 06:46:41.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:41.794 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:41.794 -07 000000447 INF: FPGA: Recv ZPIEZORD 31214 17-03-18 06:46:41.804 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:41.804 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.596 V. Piezo Error = -9.3 V. 17-03-18 06:46:41.804 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35424 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35424 (-167.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35419 (-167.0 uncal um), Max = 35430 (-167.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:46:41.804 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35424, posNoise = 6, negNoise = 5 17-03-18 06:46:41.804 -07 000000610 INF: Z Motor: After move to -0.167883, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:41.804 -07 000000610 INF: Z Motor: Settle wait time = 1460 ms, measure time = 104 ms (allowed 150 ms), total time = 1564 ms 17-03-18 06:46:41.804 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:41.854 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1728 ms 17-03-18 06:46:41.854 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:41.854 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.517578125, Z-position -0.167894642920875. ---------- 17-03-18 06:46:41.854 -07 000000610 INF: Cycle 153 Tile 15 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:41.854 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36498, sync = True, waitForSettling = True) 17-03-18 06:46:41.854 -07 000000610 INF: Z Motor: Moving to -0.167077 mm, started at -0.167895 mm, distance = 0.82 um 17-03-18 06:46:41.854 -07 000000610 INF: FPGA: Xmit ZDACW 36498\n [Z Motor] 17-03-18 06:46:41.854 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 06:46:41.864 -07 000000610 INF: FPGA: 'ZDACW 36498' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:46:41.864 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:41.864 -07 000000447 INF: FPGA: Recv ZDACR 36498 17-03-18 06:46:41.874 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:41.874 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:41.894 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:41.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:42.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:42.024 -07 000000480 INF: FPGA: Recv ZSGSRD 35299 17-03-18 06:46:42.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:42.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:42.034 -07 000000590 INF: FPGA: Recv ZSGSRD 35299 17-03-18 06:46:42.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:42.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:42.044 -07 000000590 INF: FPGA: Recv ZSGSRD 35294 17-03-18 06:46:42.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:42.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:42.054 -07 000000590 INF: FPGA: Recv ZSGSRD 35301 17-03-18 06:46:42.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:42.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:42.064 -07 000000447 INF: FPGA: Recv ZSGSRD 35301 17-03-18 06:46:42.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:42.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:42.074 -07 000000480 INF: FPGA: Recv ZSGSRD 35298 17-03-18 06:46:42.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:42.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:42.084 -07 000000590 INF: FPGA: Recv ZSGSRD 35301 17-03-18 06:46:42.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:42.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:42.094 -07 000000590 INF: FPGA: Recv ZSGSRD 35296 17-03-18 06:46:42.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:42.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:42.104 -07 000000480 INF: FPGA: Recv ZSGSRD 35299 17-03-18 06:46:42.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:42.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:42.114 -07 000000480 INF: FPGA: Recv ZSGSRD 35301 17-03-18 06:46:42.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:42.124 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:42.124 -07 000000626 INF: FPGA: Recv ZPIEZORD 31036 17-03-18 06:46:42.134 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:42.134 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.569 V. Piezo Error = -9.4 V. 17-03-18 06:46:42.134 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35299 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35299 (-166.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35294 (-166.2 uncal um), Max = 35301 (-166.2 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:46:42.134 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35299, posNoise = 2, negNoise = 5 17-03-18 06:46:42.134 -07 000000610 INF: Z Motor: After move to -0.167077, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:42.134 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 06:46:42.134 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:42.134 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:42.134 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:42.134 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:42.134 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:42.134 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:42.134 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:42.134 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:42.134 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:42.134 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:42.134 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:42.134 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:42.144 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 06:46:42.144 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:42.144 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 06:46:42.144 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:42.144 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 06:46:42.144 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 06:46:42.154 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 06:46:42.154 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 06:46:42.154 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 36674 150\n [Camera] 17-03-18 06:46:42.254 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.000345, 17-03-18 06:46:42.354 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:42.814 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:42.814 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:42.814 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:42.824 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:42.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:42.824 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:42.824 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:42.824 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-18 06:46:42.824 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:42.824 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:46:43.014 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36674 851 17-03-18 06:46:43.164 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:43.194 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 374 ms. 17-03-18 06:46:43.194 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms. 17-03-18 06:46:43.194 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:43.204 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 06:46:43.204 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 06:46:43.204 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:43.204 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:43.204 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 06:46:43.204 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:43.214 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 06:46:43.384 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:43.384 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:43.384 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:43.384 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:43.384 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:43.384 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:43.394 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:43.394 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start. 17-03-18 06:46:43.394 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:43.394 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start. 17-03-18 06:46:43.574 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:46:43.574 -07 000000480 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:43.574 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 36674 150' command took 2 ms to send, 1417 ms to get response, and 1425 ms overall 17-03-18 06:46:43.574 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.167470 17-03-18 06:46:43.574 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.16747 mm 17-03-18 06:46:43.574 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:43.584 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True) 17-03-18 06:46:43.584 -07 000000590 INF: Y Motor: Moving to 72.3626 mm, started at 71.5176 mm, delta = 0.8450 mm 17-03-18 06:46:43.584 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:43.584 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 36584, sync = True, waitForSettling = False) 17-03-18 06:46:43.584 -07 000000461 INF: Z Motor: Moving to -0.167471 mm, started at -0.167092 mm, distance = -0.38 um 17-03-18 06:46:43.584 -07 000000455 INF: FPGA: Recv YRDPOS 146469 17-03-18 06:46:43.594 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:46:43.594 -07 000000590 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:43.594 -07 000000461 INF: FPGA: Xmit ZDACW 36584\n [Z Motor] 17-03-18 06:46:43.594 -07 000000455 INF: FPGA: Recv ZDACW 17-03-18 06:46:43.594 -07 000000590 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:43.594 -07 000000590 INF: Y Motor: Moving 1351 steps-31 17-03-18 06:46:43.604 -07 000000461 INF: FPGA: 'ZDACW 36584' command took 0 ms to send, 0 ms to get response, and 16 ms overall 17-03-18 06:46:43.604 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:43.614 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:43.614 -07 000000561 INF: FPGA: Recv ZDACR 36584 17-03-18 06:46:43.624 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:46:43.624 -07 000000461 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet)) 17-03-18 06:46:43.784 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 397 ms. 17-03-18 06:46:43.784 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms. 17-03-18 06:46:43.784 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:43.784 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 395 ms. 17-03-18 06:46:43.784 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 06:46:43.784 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:43.794 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:43.794 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms. 17-03-18 06:46:43.794 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:43.804 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms. 17-03-18 06:46:43.974 -07 000000626 INF: FPGA: Recv YMVTILE 17-03-18 06:46:43.974 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall 17-03-18 06:46:44.034 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:44.034 -07 000000480 INF: FPGA: Recv YRDPOS 148169 17-03-18 06:46:44.044 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:44.044 -07 000000590 INF: Y Motor: Encoder = 148169 = motor step 115757.0 = 72.3481 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:44.044 -07 000000590 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 06:46:44.044 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.845 mm, average velocity = 2.201 mm/sec 17-03-18 06:46:44.994 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:44.994 -07 000000437 INF: FPGA: Recv YRDPOS 148170 17-03-18 06:46:45.004 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:45.004 -07 000000590 INF: Y Motor: Encoder = 148170 = motor step 115757.8 = 72.3486 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:45.034 -07 000000590 INF: Y Motor: After move to 72.362610, error = -0.013977, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:45.034 -07 000000590 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 06:46:45.034 -07 000000590 INF: Y Motor: Moved to 72.3486 after 1450 ms (table move) 17-03-18 06:46:45.034 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167471 mm (DAC = 36584) 17-03-18 06:46:45.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.034 -07 000000590 INF: FPGA: Recv ZSGSRD 35357 17-03-18 06:46:45.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:46:45.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.044 -07 000000591 INF: FPGA: Recv ZSGSRD 35357 17-03-18 06:46:45.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.054 -07 000000590 INF: FPGA: Recv ZSGSRD 35348 17-03-18 06:46:45.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.064 -07 000000447 INF: FPGA: Recv ZSGSRD 35360 17-03-18 06:46:45.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:45.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.074 -07 000000561 INF: FPGA: Recv ZSGSRD 35351 17-03-18 06:46:45.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:45.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.084 -07 000000561 INF: FPGA: Recv ZSGSRD 35358 17-03-18 06:46:45.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.094 -07 000000561 INF: FPGA: Recv ZSGSRD 35359 17-03-18 06:46:45.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.104 -07 000000561 INF: FPGA: Recv ZSGSRD 35363 17-03-18 06:46:45.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.114 -07 000000561 INF: FPGA: Recv ZSGSRD 35362 17-03-18 06:46:45.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.124 -07 000000461 INF: FPGA: Recv ZSGSRD 35355 17-03-18 06:46:45.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.134 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:45.134 -07 000000461 INF: FPGA: Recv ZPIEZORD 31141 17-03-18 06:46:45.144 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.144 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.582 V. Piezo Error = -9.3 V. 17-03-18 06:46:45.144 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.5 um, Read 10 ADC samples: Avg = 35357 (-166.6 uncal um), Error = 0.9 uncal um, Median = 35358 (-166.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35348 (-166.5 uncal um), Max = 35363 (-166.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 06:46:45.144 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35357, posNoise = 6, negNoise = 9 17-03-18 06:46:45.144 -07 000000610 INF: Z Motor: After move to -0.167471, error = 0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:45.144 -07 000000610 INF: Z Motor: Settle wait time = 1452 ms, measure time = 105 ms (allowed 150 ms), total time = 1557 ms 17-03-18 06:46:45.144 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:45.194 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1610 ms 17-03-18 06:46:45.194 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:45.194 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.3486328125, Z-position -0.167464220707377. ---------- 17-03-18 06:46:45.194 -07 000000610 INF: Cycle 153 Tile 16 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:45.194 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36407, sync = True, waitForSettling = True) 17-03-18 06:46:45.194 -07 000000610 INF: Z Motor: Moving to -0.166661 mm, started at -0.167464 mm, distance = 0.80 um 17-03-18 06:46:45.194 -07 000000610 INF: FPGA: Xmit ZDACW 36407\n [Z Motor] 17-03-18 06:46:45.204 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 06:46:45.204 -07 000000610 INF: FPGA: 'ZDACW 36407' command took 0 ms to send, 1 ms to get response, and 6 ms overall 17-03-18 06:46:45.204 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:45.204 -07 000000561 INF: FPGA: Recv ZDACR 36407 17-03-18 06:46:45.214 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:45.214 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:45.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.364 -07 000000447 INF: FPGA: Recv ZSGSRD 35232 17-03-18 06:46:45.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:45.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.374 -07 000000447 INF: FPGA: Recv ZSGSRD 35235 17-03-18 06:46:45.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.384 -07 000000561 INF: FPGA: Recv ZSGSRD 35225 17-03-18 06:46:45.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.394 -07 000000561 INF: FPGA: Recv ZSGSRD 35234 17-03-18 06:46:45.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.404 -07 000000561 INF: FPGA: Recv ZSGSRD 35235 17-03-18 06:46:45.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.414 -07 000000561 INF: FPGA: Recv ZSGSRD 35234 17-03-18 06:46:45.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.424 -07 000000561 INF: FPGA: Recv ZSGSRD 35238 17-03-18 06:46:45.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.434 -07 000000561 INF: FPGA: Recv ZSGSRD 35228 17-03-18 06:46:45.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.444 -07 000000447 INF: FPGA: Recv ZSGSRD 35232 17-03-18 06:46:45.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:45.454 -07 000000447 INF: FPGA: Recv ZSGSRD 35233 17-03-18 06:46:45.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:45.464 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:45.464 -07 000000561 INF: FPGA: Recv ZPIEZORD 30945 17-03-18 06:46:45.474 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:45.474 -07 000000610 INF: Z Motor: Piezo is near 46.1 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.555 V. Piezo Error = -9.4 V. 17-03-18 06:46:45.474 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.7 um, Read 10 ADC samples: Avg = 35233 (-165.8 uncal um), Error = 0.9 uncal um, Median = 35234 (-165.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35225 (-165.7 uncal um), Max = 35238 (-165.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 06:46:45.474 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35233, posNoise = 5, negNoise = 8 17-03-18 06:46:45.474 -07 000000610 INF: Z Motor: After move to -0.166661, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:45.474 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 06:46:45.474 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:45.474 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:45.474 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:45.474 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:45.474 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:45.474 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:45.474 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:45.474 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:45.474 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:45.474 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:45.474 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:45.474 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:45.484 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-18 06:46:45.484 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:46:45.484 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:45.484 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:45.494 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 06:46:45.494 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:46:45.494 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 06:46:45.494 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 06:46:45.504 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 36584 150\n [Camera] 17-03-18 06:46:45.704 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP turning red on 193 17-03-18 06:46:46.164 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:46.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:46.174 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:46.174 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:46.174 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:46.174 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:46.174 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:46.174 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 06:46:46.174 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:46.174 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2468220576, 0x0, 391868352) start. 17-03-18 06:46:46.364 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36584 851 17-03-18 06:46:46.514 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:46.544 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2468220576, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 06:46:46.544 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 06:46:46.544 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:46.544 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 06:46:46.544 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 06:46:46.544 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:46.554 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:46.554 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 06:46:46.554 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:46.564 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 06:46:46.734 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:46.734 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:46.734 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:46.734 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:46.734 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2619673760, 0x0, 391868352) start. 17-03-18 06:46:46.734 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:46.734 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:46.734 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:46.734 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:46.734 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 06:46:46.894 -07 000000474 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:46.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:46.924 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:46:46.924 -07 000000474 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:46.924 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 36584 150' command took 2 ms to send, 1417 ms to get response, and 1425 ms overall 17-03-18 06:46:46.924 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.167026 17-03-18 06:46:46.934 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16703 mm 17-03-18 06:46:46.934 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:46.934 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 36487, sync = True, waitForSettling = False) 17-03-18 06:46:46.934 -07 000000447 INF: Z Motor: Moving to -0.167027 mm, started at -0.166668 mm, distance = -0.36 um 17-03-18 06:46:46.934 -07 000000447 INF: FPGA: Xmit ZDACW 36487\n [Z Motor] 17-03-18 06:46:46.934 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True) 17-03-18 06:46:46.934 -07 000000561 INF: Y Motor: Moving to 73.1926 mm, started at 72.3486 mm, delta = 0.8440 mm 17-03-18 06:46:46.934 -07 000000487 INF: FPGA: Recv ZDACW 17-03-18 06:46:46.944 -07 000000447 INF: FPGA: 'ZDACW 36487' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:46:46.944 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:46.944 -07 000000462 INF: FPGA: Recv ZDACR 36487 17-03-18 06:46:46.954 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:46.954 -07 000000447 INF: Z Motor: MoveAbsStepped took 15 ms (did NOT wait for settling yet)) 17-03-18 06:46:46.954 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:46.954 -07 000000480 INF: FPGA: Recv YRDPOS 148170 17-03-18 06:46:46.964 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall 17-03-18 06:46:46.964 -07 000000561 INF: Y Motor: Encoder = 148170 = motor step 115757.8 = 72.3486 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:46.964 -07 000000561 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:46.964 -07 000000561 INF: Y Motor: Moving 1350 steps-30 17-03-18 06:46:46.964 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:47.124 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 380 ms. 17-03-18 06:46:47.124 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-18 06:46:47.124 -07 000000581 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:47.124 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2619673760, 0x0, 391868352) end. Duration was 384 ms. 17-03-18 06:46:47.124 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 06:46:47.124 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:47.124 -07 000000581 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:46:47.124 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:46:47.124 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 06:46:47.134 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-18 06:46:47.334 -07 000000447 INF: FPGA: Recv YMVTILE 17-03-18 06:46:47.334 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall 17-03-18 06:46:47.394 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:47.394 -07 000000474 INF: FPGA: Recv YRDPOS 149862 17-03-18 06:46:47.404 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:46:47.404 -07 000000561 INF: Y Motor: Encoder = 149862 = motor step 117079.7 = 73.1748 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:47.404 -07 000000561 INF: Y Motor: Position error before settling (table move) = -36 encoder counts (-0.018 mm) 17-03-18 06:46:47.404 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.233 mm/sec 17-03-18 06:46:47.614 -07 000000474 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.973092, 17-03-18 06:46:48.354 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:48.354 -07 000000625 INF: FPGA: Recv YRDPOS 149862 17-03-18 06:46:48.364 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:48.364 -07 000000561 INF: Y Motor: Encoder = 149862 = motor step 117079.7 = 73.1748 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:48.394 -07 000000561 INF: Y Motor: After move to 73.192604, error = -0.017799, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:48.394 -07 000000561 INF: Y Motor: Position error after settling (table move) = -36 encoder counts (-0.018 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:48.394 -07 000000561 INF: Y Motor: Moved to 73.1748 after 1456 ms (table move) 17-03-18 06:46:48.394 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167027 mm (DAC = 36487) 17-03-18 06:46:48.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.314 -07 000000625 INF: FPGA: Recv ZSGSRD 35292 17-03-18 06:46:49.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 910 ms to get response, and 915 ms overall 17-03-18 06:46:49.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.314 -07 000000581 INF: FPGA: Recv ZSGSRD 35295 17-03-18 06:46:49.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.324 -07 000000625 INF: FPGA: Recv ZSGSRD 35290 17-03-18 06:46:49.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.334 -07 000000447 INF: FPGA: Recv ZSGSRD 35294 17-03-18 06:46:49.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.344 -07 000000625 INF: FPGA: Recv ZSGSRD 35290 17-03-18 06:46:49.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.354 -07 000000581 INF: FPGA: Recv ZSGSRD 35290 17-03-18 06:46:49.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.364 -07 000000581 INF: FPGA: Recv ZSGSRD 35287 17-03-18 06:46:49.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.374 -07 000000626 INF: FPGA: Recv ZSGSRD 35289 17-03-18 06:46:49.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.384 -07 000000447 INF: FPGA: Recv ZSGSRD 35290 17-03-18 06:46:49.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.394 -07 000000625 INF: FPGA: Recv ZSGSRD 35288 17-03-18 06:46:49.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.404 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:49.404 -07 000000447 INF: FPGA: Recv ZPIEZORD 31044 17-03-18 06:46:49.414 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.414 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.568 V. Piezo Error = -9.4 V. 17-03-18 06:46:49.414 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35290 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35290 (-166.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35287 (-166.1 uncal um), Max = 35295 (-166.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 06:46:49.414 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35290, posNoise = 5, negNoise = 3 17-03-18 06:46:49.414 -07 000000610 INF: Z Motor: After move to -0.167027, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:49.414 -07 000000610 INF: Z Motor: Settle wait time = 1460 ms, measure time = 1017 ms (allowed 150 ms), total time = 2477 ms 17-03-18 06:46:49.414 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 1017 ms, longer than max expected time of 150 ms 17-03-18 06:46:49.414 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2482 ms 17-03-18 06:46:49.414 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:49.414 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.1748046875, Z-position -0.167033798493879. ---------- 17-03-18 06:46:49.414 -07 000000610 INF: Cycle 153 Tile 17 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:49.414 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36310, sync = True, waitForSettling = True) 17-03-18 06:46:49.414 -07 000000610 INF: Z Motor: Moving to -0.166217 mm, started at -0.167034 mm, distance = 0.82 um 17-03-18 06:46:49.414 -07 000000610 INF: FPGA: Xmit ZDACW 36310\n [Z Motor] 17-03-18 06:46:49.424 -07 000000462 INF: FPGA: Recv ZDACW 17-03-18 06:46:49.424 -07 000000610 INF: FPGA: 'ZDACW 36310' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 06:46:49.424 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:49.424 -07 000000625 INF: FPGA: Recv ZDACR 36310 17-03-18 06:46:49.434 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.434 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:49.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.584 -07 000000462 INF: FPGA: Recv ZSGSRD 35163 17-03-18 06:46:49.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:49.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.594 -07 000000625 INF: FPGA: Recv ZSGSRD 35166 17-03-18 06:46:49.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.604 -07 000000625 INF: FPGA: Recv ZSGSRD 35163 17-03-18 06:46:49.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.614 -07 000000625 INF: FPGA: Recv ZSGSRD 35162 17-03-18 06:46:49.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.624 -07 000000581 INF: FPGA: Recv ZSGSRD 35163 17-03-18 06:46:49.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.634 -07 000000581 INF: FPGA: Recv ZSGSRD 35165 17-03-18 06:46:49.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.644 -07 000000447 INF: FPGA: Recv ZSGSRD 35164 17-03-18 06:46:49.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.654 -07 000000462 INF: FPGA: Recv ZSGSRD 35161 17-03-18 06:46:49.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.664 -07 000000581 INF: FPGA: Recv ZSGSRD 35167 17-03-18 06:46:49.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:49.674 -07 000000462 INF: FPGA: Recv ZSGSRD 35162 17-03-18 06:46:49.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.684 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:49.684 -07 000000447 INF: FPGA: Recv ZPIEZORD 30881 17-03-18 06:46:49.694 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:49.694 -07 000000610 INF: Z Motor: Piezo is near 46.0 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.541 V. Piezo Error = -9.4 V. 17-03-18 06:46:49.694 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.2 um, Read 10 ADC samples: Avg = 35164 (-165.4 uncal um), Error = 0.9 uncal um, Median = 35163 (-165.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35161 (-165.3 uncal um), Max = 35167 (-165.4 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 06:46:49.694 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35164, posNoise = 3, negNoise = 3 17-03-18 06:46:49.694 -07 000000610 INF: Z Motor: After move to -0.166217, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:49.694 -07 000000610 INF: Z Motor: MoveAbsStepped took 273 ms) 17-03-18 06:46:49.694 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:49.694 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:49.694 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:49.694 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:49.694 -07 000000581 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:49.694 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:49.694 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:49.694 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:49.694 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 06:46:49.694 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:49.694 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:49.694 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:49.704 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 06:46:49.704 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:49.704 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:46:49.704 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:49.714 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 06:46:49.714 -07 000000625 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 06:46:49.714 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms. 17-03-18 06:46:49.714 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 06:46:49.714 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 36487 150\n [Camera] 17-03-18 06:46:49.914 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:50.384 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:50.384 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:50.384 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:50.384 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:50.384 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start. 17-03-18 06:46:50.384 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:50.384 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:50.384 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:50.384 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:50.384 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start. 17-03-18 06:46:50.574 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36487 851 17-03-18 06:46:50.724 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:50.764 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 06:46:50.764 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 06:46:50.764 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:50.764 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 06:46:50.764 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 06:46:50.764 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:50.764 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:50.764 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 06:46:50.764 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:50.774 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-18 06:46:50.944 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:50.944 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:50.944 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:51.074 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:51.074 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:51.074 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:51.074 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:51.074 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-18 06:46:51.084 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:51.084 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:46:51.134 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:46:51.134 -07 000000581 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:51.134 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 36487 150' command took 2 ms to send, 1419 ms to get response, and 1424 ms overall 17-03-18 06:46:51.144 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 06:46:51.144 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 18 at Y-position 73.1748046875, Z-Position -0.166224347764017. ------ 17-03-18 06:46:51.144 -07 000000625 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.17225 mm 17-03-18 06:46:51.144 -07 000000625 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:51.144 -07 000000581 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:46:51.454 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 371 ms. 17-03-18 06:46:51.454 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 06:46:51.454 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:51.454 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 06:46:51.454 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 06:46:51.454 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:51.454 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:51.464 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:51.464 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 511 ms. 17-03-18 06:46:51.464 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 06:46:51.474 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 37627, sync = True, waitForSettling = False) 17-03-18 06:46:51.474 -07 000000437 INF: Z Motor: Moving to -0.172245 mm, started at -0.166224 mm, distance = -6.02 um 17-03-18 06:46:51.474 -07 000000437 INF: FPGA: Xmit ZDACW 37627\n [Z Motor] 17-03-18 06:46:51.474 -07 000000455 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:46:51.474 -07 000000581 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 322 ms to get response, and 327 ms overall 17-03-18 06:46:51.474 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 06:46:51.474 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True) 17-03-18 06:46:51.474 -07 000000591 INF: Y Motor: Moving to 74.0226 mm, started at 73.1748 mm, delta = 0.8478 mm 17-03-18 06:46:51.484 -07 000000437 INF: FPGA: 'ZDACW 37627' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:51.484 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:51.484 -07 000000487 INF: FPGA: Recv YRDPOS 149862 17-03-18 06:46:51.494 -07 000000581 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:46:51.494 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 06:46:51.494 -07 000000591 INF: Y Motor: Encoder = 149862 = motor step 117079.7 = 73.1748 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:51.494 -07 000000591 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:51.494 -07 000000591 INF: Y Motor: Moving 1356 steps-36 17-03-18 06:46:51.504 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:51.504 -07 000000462 INF: FPGA: Recv ZDACR 37627 17-03-18 06:46:51.514 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:51.514 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:46:51.514 -07 000000437 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet)) 17-03-18 06:46:51.694 -07 000000462 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:46:51.694 -07 000000581 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 217 ms overall 17-03-18 06:46:51.884 -07 000000474 INF: FPGA: Recv YMVTILE 17-03-18 06:46:51.884 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 06:46:51.894 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:51.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:51.934 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:51.934 -07 000000561 INF: FPGA: Recv YRDPOS 151565 17-03-18 06:46:51.944 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:51.944 -07 000000591 INF: Y Motor: Encoder = 151565 = motor step 118410.2 = 74.0063 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:51.944 -07 000000591 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm) 17-03-18 06:46:51.944 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.848 mm, average velocity = 2.136 mm/sec 17-03-18 06:46:52.894 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:52.894 -07 000000461 INF: FPGA: Recv YRDPOS 151566 17-03-18 06:46:52.904 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:52.904 -07 000000591 INF: Y Motor: Encoder = 151566 = motor step 118410.9 = 74.0068 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:52.924 -07 000000591 INF: Y Motor: After move to 74.022606, error = -0.015770, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:52.924 -07 000000591 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 06:46:52.924 -07 000000591 INF: Y Motor: Moved to 74.0068 after 1451 ms (table move) 17-03-18 06:46:52.934 -07 000000625 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172245 mm (DAC = 37627) 17-03-18 06:46:52.934 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:52.934 -07 000000461 INF: FPGA: Recv ZSGSRD 36112 17-03-18 06:46:52.944 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:52.944 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:52.944 -07 000000455 INF: FPGA: Recv ZSGSRD 36103 17-03-18 06:46:52.954 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:52.954 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:52.954 -07 000000437 INF: FPGA: Recv ZSGSRD 36096 17-03-18 06:46:52.964 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:52.964 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:52.964 -07 000000474 INF: FPGA: Recv ZSGSRD 36091 17-03-18 06:46:52.974 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:52.984 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:52.984 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.989471, 17-03-18 06:46:52.984 -07 000000581 INF: FPGA: Recv ZSGSRD 36101 17-03-18 06:46:52.994 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:46:53.014 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:53.014 -07 000000480 INF: FPGA: Recv ZSGSRD 36105 17-03-18 06:46:53.024 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:46:53.034 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:53.034 -07 000000461 INF: FPGA: Recv ZSGSRD 36100 17-03-18 06:46:53.044 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:46:53.064 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:53.064 -07 000000474 INF: FPGA: Recv ZSGSRD 36105 17-03-18 06:46:53.074 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:46:53.074 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:53.074 -07 000000461 INF: FPGA: Recv ZSGSRD 36103 17-03-18 06:46:53.084 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:53.084 -07 000000625 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:53.084 -07 000000455 INF: FPGA: Recv ZSGSRD 36099 17-03-18 06:46:53.094 -07 000000625 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:53.094 -07 000000625 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:53.094 -07 000000461 INF: FPGA: Recv ZPIEZORD 32157 17-03-18 06:46:53.104 -07 000000625 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:53.104 -07 000000625 INF: Z Motor: Piezo is near 48.7 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.742 V. Piezo Error = -8.7 V. 17-03-18 06:46:53.104 -07 000000625 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36102 (-171.4 uncal um), Error = 0.9 uncal um, Median = 36102 (-171.4 uncal um), StdDev = 6 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 36091 (-171.3 uncal um), Max = 36112 (-171.4 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 11 (0.1 uncal um) 17-03-18 06:46:53.104 -07 000000625 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36102, posNoise = 10, negNoise = 11 17-03-18 06:46:53.104 -07 000000625 INF: Z Motor: After move to -0.172245, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:53.104 -07 000000625 INF: Z Motor: Settle wait time = 1459 ms, measure time = 169 ms (allowed 150 ms), total time = 1628 ms 17-03-18 06:46:53.104 -07 000000625 INF: Z Motor: Warning: Actual position measuring time = 169 ms, longer than max expected time of 150 ms 17-03-18 06:46:53.104 -07 000000625 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1955 ms 17-03-18 06:46:53.104 -07 000000625 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:53.104 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:53.104 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:53.104 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:53.104 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:53.104 -07 000000480 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:46:53.104 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:53.114 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:53.114 -07 000000480 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:46:53.114 -07 000000480 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 06:46:53.114 -07 000000480 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:46:53.114 -07 000000480 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms. 17-03-18 06:46:53.114 -07 000000480 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms. 17-03-18 06:46:53.124 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:46:53.164 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:46:53.464 -07 000000447 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:46:53.464 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:46:53.464 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:46:53.464 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) start. 17-03-18 06:46:53.504 -07 000000561 INF: FPGA: Recv @CAMSNAP 380 17-03-18 06:46:53.504 -07 000000561 INF: FPGA: Recv CAMSNAP 17-03-18 06:46:53.504 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 377 ms to get response, and 385 ms overall 17-03-18 06:46:53.584 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) end. Duration was 116 ms. 17-03-18 06:46:53.584 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:53.584 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 06:46:53.584 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms. 17-03-18 06:46:53.604 -07 000000447 INF: Autofocus start 17-03-18 06:46:53.604 -07 000000447 INF: MeasureProfile start 17-03-18 06:46:53.604 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:46:53.614 -07 000000447 INF: MeasureProfile done 17-03-18 06:46:53.614 -07 000000447 INF: X=-32 Z correction [um]=-0.2344 17-03-18 06:46:53.614 -07 000000447 INF: Autofocus finished 17-03-18 06:46:53.614 -07 000000447 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:46:53.614 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 9 ms to get response, and 14 ms overall 17-03-18 06:46:53.624 -07 000000561 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:46:53.824 -07 000000447 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:46:53.824 -07 000000561 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 06:46:53.824 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0068359375, Z-position -0.172250258752989. ---------- 17-03-18 06:46:53.824 -07 000000610 INF: Cycle 153 Tile 18 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:53.834 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36088, sync = True, waitForSettling = True) 17-03-18 06:46:53.834 -07 000000610 INF: Z Motor: Moving to -0.165200 mm, started at -0.172250 mm, distance = 7.05 um 17-03-18 06:46:53.834 -07 000000610 INF: FPGA: Xmit ZDACW 36088\n [Z Motor] 17-03-18 06:46:53.834 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 06:46:53.844 -07 000000610 INF: FPGA: 'ZDACW 36088' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:53.844 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:53.844 -07 000000447 INF: FPGA: Recv ZDACR 36088 17-03-18 06:46:53.854 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:53.854 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:54.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:54.004 -07 000000447 INF: FPGA: Recv ZSGSRD 35002 17-03-18 06:46:54.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:54.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:54.014 -07 000000561 INF: FPGA: Recv ZSGSRD 35000 17-03-18 06:46:54.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:54.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:54.024 -07 000000561 INF: FPGA: Recv ZSGSRD 35017 17-03-18 06:46:54.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:54.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:54.034 -07 000000561 INF: FPGA: Recv ZSGSRD 35003 17-03-18 06:46:54.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:54.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:54.044 -07 000000561 INF: FPGA: Recv ZSGSRD 35003 17-03-18 06:46:54.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:54.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:54.054 -07 000000561 INF: FPGA: Recv ZSGSRD 35003 17-03-18 06:46:54.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:54.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:54.064 -07 000000447 INF: FPGA: Recv ZSGSRD 35006 17-03-18 06:46:54.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:54.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:54.074 -07 000000561 INF: FPGA: Recv ZSGSRD 35008 17-03-18 06:46:54.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:54.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:54.084 -07 000000447 INF: FPGA: Recv ZSGSRD 35003 17-03-18 06:46:54.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:54.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:54.094 -07 000000447 INF: FPGA: Recv ZSGSRD 35005 17-03-18 06:46:54.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:54.104 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:54.104 -07 000000447 INF: FPGA: Recv ZPIEZORD 30670 17-03-18 06:46:54.114 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:54.114 -07 000000610 INF: Z Motor: Piezo is near 45.5 V (nominally 0 to 100 V), expect near 55.1 V, since DAC is at 5.507 V. Piezo Error = -9.5 V. 17-03-18 06:46:54.114 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.2 um, Read 10 ADC samples: Avg = 35005 (-164.3 uncal um), Error = 0.9 uncal um, Median = 35003 (-164.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35000 (-164.3 uncal um), Max = 35017 (-164.4 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:46:54.114 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35005, posNoise = 12, negNoise = 5 17-03-18 06:46:54.114 -07 000000610 INF: Z Motor: After move to -0.165200, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:54.114 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-18 06:46:54.114 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:54.114 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:54.114 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:54.114 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:54.114 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:54.114 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:54.114 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:54.114 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:54.114 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:46:54.114 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:54.114 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:54.114 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:54.124 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 06:46:54.124 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:54.124 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-18 06:46:54.124 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:54.144 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 19 ms. 17-03-18 06:46:54.144 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 25 ms. 17-03-18 06:46:54.144 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 19 ms. 17-03-18 06:46:54.144 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 26 ms. 17-03-18 06:46:54.144 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 36265 150\n [Camera] 17-03-18 06:46:54.344 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:54.814 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:54.814 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:54.814 -07 000000581 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:54.814 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:54.814 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:54.814 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:54.814 -07 000000581 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:54.814 -07 000000581 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start. 17-03-18 06:46:54.824 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:54.824 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start. 17-03-18 06:46:55.004 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36265 853 17-03-18 06:46:55.154 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:55.214 -07 000000581 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 396 ms. 17-03-18 06:46:55.214 -07 000000581 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 06:46:55.214 -07 000000581 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:55.214 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 394 ms. 17-03-18 06:46:55.324 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 503 ms. 17-03-18 06:46:55.324 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:55.324 -07 000000581 INF: Camera: CopyActivePixFullImage end. Duration was 112 ms. 17-03-18 06:46:55.324 -07 000000581 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 515 ms. 17-03-18 06:46:55.324 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:55.334 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 521 ms. 17-03-18 06:46:55.374 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:55.374 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:55.374 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:55.384 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:55.384 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:55.384 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:55.384 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:55.384 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-18 06:46:55.384 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:55.384 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:46:55.564 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:46:55.574 -07 000000626 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:55.574 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 36265 150' command took 2 ms to send, 1420 ms to get response, and 1425 ms overall 17-03-18 06:46:55.574 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.165456 17-03-18 06:46:55.574 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16546 mm 17-03-18 06:46:55.574 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:46:55.574 -07 000000625 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True) 17-03-18 06:46:55.574 -07 000000625 INF: Y Motor: Moving to 74.8526 mm, started at 74.0068 mm, delta = 0.8458 mm 17-03-18 06:46:55.574 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:55.574 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 36144, sync = True, waitForSettling = False) 17-03-18 06:46:55.574 -07 000000480 INF: Z Motor: Moving to -0.165457 mm, started at -0.165203 mm, distance = -0.25 um 17-03-18 06:46:55.574 -07 000000626 INF: FPGA: Recv YRDPOS 151566 17-03-18 06:46:55.584 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:46:55.584 -07 000000625 INF: Y Motor: Encoder = 151566 = motor step 118410.9 = 74.0068 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:55.584 -07 000000625 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:46:55.584 -07 000000625 INF: Y Motor: Moving 1353 steps-33 17-03-18 06:46:55.584 -07 000000480 INF: FPGA: Xmit ZDACW 36144\n [Z Motor] 17-03-18 06:46:55.584 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 06:46:55.594 -07 000000480 INF: FPGA: 'ZDACW 36144' command took 1 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 06:46:55.594 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:55.594 -07 000000581 INF: FPGA: Recv ZDACR 36144 17-03-18 06:46:55.604 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:55.604 -07 000000480 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet)) 17-03-18 06:46:55.604 -07 000000625 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:46:55.784 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 400 ms. 17-03-18 06:46:55.784 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-18 06:46:55.784 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:55.784 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 398 ms. 17-03-18 06:46:55.784 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms. 17-03-18 06:46:55.784 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:55.794 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:55.794 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 412 ms. 17-03-18 06:46:55.794 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:46:55.794 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 416 ms. 17-03-18 06:46:55.974 -07 000000455 INF: FPGA: Recv YMVTILE 17-03-18 06:46:55.974 -07 000000625 INF: FPGA: 'YMVTILE 1327' command took 1 ms to send, 369 ms to get response, and 399 ms overall 17-03-18 06:46:56.014 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:56.014 -07 000000455 INF: FPGA: Recv YRDPOS 153253 17-03-18 06:46:56.024 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:46:56.024 -07 000000625 INF: Y Motor: Encoder = 153253 = motor step 119728.9 = 74.8306 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:56.024 -07 000000625 INF: Y Motor: Position error before settling (table move) = -45 encoder counts (-0.022 mm) 17-03-18 06:46:56.024 -07 000000625 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.846 mm, average velocity = 2.120 mm/sec 17-03-18 06:46:56.894 -07 000000581 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:46:56.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:46:56.974 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:46:56.974 -07 000000480 INF: FPGA: Recv YRDPOS 153253 17-03-18 06:46:56.984 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:56.984 -07 000000625 INF: Y Motor: Encoder = 153253 = motor step 119728.9 = 74.8306 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:46:57.004 -07 000000625 INF: Y Motor: After move to 74.852608, error = -0.022041, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:46:57.004 -07 000000625 INF: Y Motor: Position error after settling (table move) = -45 encoder counts (-0.022 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:46:57.004 -07 000000625 INF: Y Motor: Moved to 74.8306 after 1434 ms (table move) 17-03-18 06:46:57.014 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.165457 mm (DAC = 36144) 17-03-18 06:46:57.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.014 -07 000000487 INF: FPGA: Recv ZSGSRD 35050 17-03-18 06:46:57.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:46:57.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.024 -07 000000487 INF: FPGA: Recv ZSGSRD 35050 17-03-18 06:46:57.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.034 -07 000000591 INF: FPGA: Recv ZSGSRD 35043 17-03-18 06:46:57.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.044 -07 000000625 INF: FPGA: Recv ZSGSRD 35040 17-03-18 06:46:57.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.054 -07 000000474 INF: FPGA: Recv ZSGSRD 35046 17-03-18 06:46:57.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.064 -07 000000447 INF: FPGA: Recv ZSGSRD 35037 17-03-18 06:46:57.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.074 -07 000000487 INF: FPGA: Recv ZSGSRD 35047 17-03-18 06:46:57.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.084 -07 000000581 INF: FPGA: Recv ZSGSRD 35050 17-03-18 06:46:57.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.094 -07 000000591 INF: FPGA: Recv ZSGSRD 35044 17-03-18 06:46:57.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.104 -07 000000626 INF: FPGA: Recv ZSGSRD 35041 17-03-18 06:46:57.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.114 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:57.114 -07 000000474 INF: FPGA: Recv ZPIEZORD 30736 17-03-18 06:46:57.124 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.124 -07 000000610 INF: Z Motor: Piezo is near 45.7 V (nominally 0 to 100 V), expect near 55.2 V, since DAC is at 5.515 V. Piezo Error = -9.5 V. 17-03-18 06:46:57.124 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.5 um, Read 10 ADC samples: Avg = 35045 (-164.6 uncal um), Error = 0.9 uncal um, Median = 35045 (-164.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35037 (-164.5 uncal um), Max = 35050 (-164.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 06:46:57.124 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35045, posNoise = 5, negNoise = 8 17-03-18 06:46:57.124 -07 000000610 INF: Z Motor: After move to -0.165457, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:57.124 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 106 ms (allowed 150 ms), total time = 1544 ms 17-03-18 06:46:57.124 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 06:46:57.174 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms 17-03-18 06:46:57.174 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:46:57.174 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83056640625, Z-position -0.165459866519148. ---------- 17-03-18 06:46:57.174 -07 000000610 INF: Cycle 153 Tile 19 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:46:57.174 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 35967, sync = True, waitForSettling = True) 17-03-18 06:46:57.174 -07 000000610 INF: Z Motor: Moving to -0.164646 mm, started at -0.165460 mm, distance = 0.81 um 17-03-18 06:46:57.174 -07 000000610 INF: FPGA: Xmit ZDACW 35967\n [Z Motor] 17-03-18 06:46:57.174 -07 000000581 INF: FPGA: Recv ZDACW 17-03-18 06:46:57.184 -07 000000610 INF: FPGA: 'ZDACW 35967' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:46:57.184 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:46:57.184 -07 000000480 INF: FPGA: Recv ZDACR 35967 17-03-18 06:46:57.194 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.194 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:46:57.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.344 -07 000000626 INF: FPGA: Recv ZSGSRD 34919 17-03-18 06:46:57.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:46:57.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.354 -07 000000625 INF: FPGA: Recv ZSGSRD 34923 17-03-18 06:46:57.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.364 -07 000000487 INF: FPGA: Recv ZSGSRD 34924 17-03-18 06:46:57.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.374 -07 000000625 INF: FPGA: Recv ZSGSRD 34916 17-03-18 06:46:57.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.384 -07 000000474 INF: FPGA: Recv ZSGSRD 34924 17-03-18 06:46:57.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:57.394 -07 000000561 INF: FPGA: Recv ZSGSRD 34917 17-03-18 06:46:57.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:57.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:58.314 -07 000000591 INF: FPGA: Recv ZSGSRD 34919 17-03-18 06:46:58.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 903 ms to get response, and 912 ms overall 17-03-18 06:46:58.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:58.314 -07 000000461 INF: FPGA: Recv ZSGSRD 34917 17-03-18 06:46:58.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:46:58.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:58.324 -07 000000626 INF: FPGA: Recv ZSGSRD 34913 17-03-18 06:46:58.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:58.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:46:58.334 -07 000000561 INF: FPGA: Recv ZSGSRD 34918 17-03-18 06:46:58.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:58.344 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:46:58.344 -07 000000487 INF: FPGA: Recv ZPIEZORD 30578 17-03-18 06:46:58.354 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:46:58.354 -07 000000610 INF: Z Motor: Piezo is near 45.3 V (nominally 0 to 100 V), expect near 54.9 V, since DAC is at 5.488 V. Piezo Error = -9.6 V. 17-03-18 06:46:58.354 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -164.6 um, Read 10 ADC samples: Avg = 34919 (-163.8 uncal um), Error = 0.9 uncal um, Median = 34918 (-163.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 34913 (-163.8 uncal um), Max = 34924 (-163.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:46:58.354 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34919, posNoise = 5, negNoise = 6 17-03-18 06:46:58.354 -07 000000610 INF: Z Motor: After move to -0.164646, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:46:58.354 -07 000000610 INF: Z Motor: MoveAbsStepped took 1175 ms) 17-03-18 06:46:58.354 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:46:58.354 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:46:58.354 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:46:58.354 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:46:58.354 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:46:58.354 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:46:58.354 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:46:58.354 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:46:58.354 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 06:46:58.364 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:46:58.364 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:46:58.364 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:46:58.364 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 06:46:58.364 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:46:58.364 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:46:58.364 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:46:58.374 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 06:46:58.374 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 06:46:58.374 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms. 17-03-18 06:46:58.374 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 06:46:58.374 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 36144 150\n [Camera] 17-03-18 06:46:58.574 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:46:58.624 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.99219, 17-03-18 06:46:59.044 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:46:59.044 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:46:59.044 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:59.044 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:46:59.044 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:46:59.044 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:59.044 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:59.044 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start. 17-03-18 06:46:59.054 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:59.054 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-18 06:46:59.234 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36144 851 17-03-18 06:46:59.384 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:46:59.444 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 397 ms. 17-03-18 06:46:59.444 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 06:46:59.444 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:59.444 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 396 ms. 17-03-18 06:46:59.444 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms. 17-03-18 06:46:59.444 -07 000000581 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:46:59.444 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:59.444 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms. 17-03-18 06:46:59.454 -07 000000581 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:46:59.454 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms. 17-03-18 06:46:59.614 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:46:59.614 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:46:59.614 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:46:59.614 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:46:59.614 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:46:59.614 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:46:59.614 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:46:59.614 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start. 17-03-18 06:46:59.614 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:46:59.614 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start. 17-03-18 06:46:59.804 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:46:59.804 -07 000000461 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:46:59.804 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 36144 150' command took 2 ms to send, 1424 ms to get response, and 1427 ms overall 17-03-18 06:47:00.014 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 400 ms. 17-03-18 06:47:00.014 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 06:47:00.014 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:00.014 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 400 ms. 17-03-18 06:47:00.014 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-18 06:47:00.014 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:00.024 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:00.024 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms. 17-03-18 06:47:00.024 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start. 17-03-18 06:47:00.024 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:00.034 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 417 ms. 17-03-18 06:47:00.064 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms. 17-03-18 06:47:00.064 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start. 17-03-18 06:47:00.104 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms. 17-03-18 06:47:00.104 -07 000000610 INF: Move compensator for Bottom-surface imaging. 17-03-18 06:47:00.104 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator] 17-03-18 06:47:00.114 -07 000000591 INF: FPGA: Recv EMCUR 17-03-18 06:47:00.114 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-18 06:47:00.114 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator] 17-03-18 06:47:00.614 -07 000000581 INF: FPGA: Recv EMIN 17-03-18 06:47:00.614 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 494 ms to get response, and 502 ms overall 17-03-18 06:47:00.614 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator] 17-03-18 06:47:00.614 -07 000000480 INF: FPGA: Recv EMCUR 17-03-18 06:47:00.624 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:47:00.624 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 06:47:00.624 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83056640625, Z-Position -0.164650415789286. ------ 17-03-18 06:47:00.624 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:47:00.624 -07 000000487 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13923 mm 17-03-18 06:47:00.624 -07 000000487 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:00.624 -07 000000581 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True) 17-03-18 06:47:00.624 -07 000000581 INF: Y Motor: Moving to 59.9126 mm, started at 74.8306 mm, delta = -14.9180 mm 17-03-18 06:47:00.624 -07 000000561 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:47:00.624 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 30414, sync = True, waitForSettling = False) 17-03-18 06:47:00.634 -07 000000480 INF: Z Motor: Moving to -0.139226 mm, started at -0.164650 mm, distance = 25.42 um 17-03-18 06:47:00.634 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:47:00.634 -07 000000581 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:00.634 -07 000000561 INF: FPGA: Recv YRDPOS 153254 17-03-18 06:47:00.644 -07 000000581 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 06:47:00.644 -07 000000581 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:00.644 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:47:00.644 -07 000000581 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False 17-03-18 06:47:00.644 -07 000000581 INF: Y Motor: Moving to 122701 encoder counts 17-03-18 06:47:00.654 -07 000000480 INF: FPGA: Xmit ZDACW 30414\n [Z Motor] 17-03-18 06:47:00.654 -07 000000591 INF: FPGA: Recv ZDACW 17-03-18 06:47:00.664 -07 000000581 INF: FPGA: Xmit YMVTO 122701\n [Y Motor] 17-03-18 06:47:00.664 -07 000000480 INF: FPGA: 'ZDACW 30414' command took 0 ms to send, 0 ms to get response, and 28 ms overall 17-03-18 06:47:00.674 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:00.674 -07 000000591 INF: FPGA: Recv ZDACR 30414 17-03-18 06:47:00.684 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:47:00.684 -07 000000480 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet)) 17-03-18 06:47:00.844 -07 000000480 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:47:00.844 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 211 ms overall 17-03-18 06:47:01.894 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:01.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:02.284 -07 000000561 INF: FPGA: Recv YMVTO 122701 23904 17-03-18 06:47:02.284 -07 000000581 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1619 ms to get response, and 1644 ms overall 17-03-18 06:47:02.284 -07 000000581 INF: Y Motor: Position error before settling = 0 encoder counts (0.000 mm) 17-03-18 06:47:02.284 -07 000000581 INF: Y Motor: To move from 74.831 to 59.913 (-14.918 mm) should take 23870 steps, but required 23904 steps (14.940 mm). Slippage = 0.021 mm (0.00%). 17-03-18 06:47:02.284 -07 000000581 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1645 ms, distance = 14.918 mm, average velocity = 9.069 mm/sec 17-03-18 06:47:03.984 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.999021, 17-03-18 06:47:05.134 -07 000000581 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:05.134 -07 000000590 INF: FPGA: Recv YRDPOS 122695 17-03-18 06:47:05.144 -07 000000581 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:05.144 -07 000000581 INF: Y Motor: Encoder = 122695 = motor step 95855.5 = 59.9097 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:05.184 -07 000000581 INF: Y Motor: After move to 59.912609, error = -0.002941, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:05.184 -07 000000581 INF: Y Motor: Position error after settling = -6 encoder counts (-0.003 mm), Delta during settling = -6 counts (-0.003 mm) 17-03-18 06:47:05.184 -07 000000581 INF: Y Motor: Moved to 59.9097 after 4554 ms 17-03-18 06:47:05.184 -07 000000487 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139226 mm (DAC = 30414) 17-03-18 06:47:05.184 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:05.184 -07 000000626 INF: FPGA: Recv ZSGSRD 30960 17-03-18 06:47:05.194 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:47:05.194 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:05.194 -07 000000561 INF: FPGA: Recv ZSGSRD 30960 17-03-18 06:47:05.204 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:05.204 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:05.204 -07 000000626 INF: FPGA: Recv ZSGSRD 30965 17-03-18 06:47:05.214 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:05.214 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:05.214 -07 000000581 INF: FPGA: Recv ZSGSRD 30964 17-03-18 06:47:05.224 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:05.224 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:05.224 -07 000000591 INF: FPGA: Recv ZSGSRD 30963 17-03-18 06:47:05.234 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:05.234 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:05.234 -07 000000581 INF: FPGA: Recv ZSGSRD 30963 17-03-18 06:47:05.244 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:05.244 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:05.244 -07 000000561 INF: FPGA: Recv ZSGSRD 30964 17-03-18 06:47:05.254 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:05.254 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:05.254 -07 000000461 INF: FPGA: Recv ZSGSRD 30969 17-03-18 06:47:05.264 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:05.264 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:05.264 -07 000000626 INF: FPGA: Recv ZSGSRD 30958 17-03-18 06:47:05.274 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:05.274 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:05.274 -07 000000581 INF: FPGA: Recv ZSGSRD 30964 17-03-18 06:47:05.284 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:05.284 -07 000000487 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:05.284 -07 000000561 INF: FPGA: Recv ZPIEZORD 26403 17-03-18 06:47:05.294 -07 000000487 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:05.294 -07 000000487 INF: Z Motor: Piezo is near 36.4 V (nominally 0 to 100 V), expect near 46.4 V, since DAC is at 4.641 V. Piezo Error = -10.0 V. 17-03-18 06:47:05.294 -07 000000487 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.2 um, Read 10 ADC samples: Avg = 30963 (-138.4 uncal um), Error = 0.8 uncal um, Median = 30964 (-138.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30958 (-138.4 uncal um), Max = 30969 (-138.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:47:05.294 -07 000000487 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30963, posNoise = 6, negNoise = 5 17-03-18 06:47:05.294 -07 000000487 INF: Z Motor: After move to -0.139226, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:05.294 -07 000000487 INF: Z Motor: Settle wait time = 4554 ms, measure time = 104 ms (allowed 150 ms), total time = 4658 ms 17-03-18 06:47:05.294 -07 000000487 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:05.344 -07 000000487 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4713 ms 17-03-18 06:47:05.344 -07 000000487 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:05.344 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:05.344 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:05.344 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:05.344 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:05.344 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:47:05.344 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:05.344 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:05.344 -07 000000561 INF: Camera: sBCa_SetPowerMode(785074288, 1) start. 17-03-18 06:47:05.374 -07 000000561 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms. 17-03-18 06:47:05.374 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:47:05.374 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms. 17-03-18 06:47:05.374 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:47:05.384 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-18 06:47:05.384 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms. 17-03-18 06:47:05.394 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:47:05.434 -07 000000590 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:47:05.734 -07 000000590 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:47:05.734 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:47:05.734 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:47:05.734 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) start. 17-03-18 06:47:05.774 -07 000000487 INF: FPGA: Recv @CAMSNAP 380 17-03-18 06:47:05.774 -07 000000590 INF: FPGA: Recv CAMSNAP 17-03-18 06:47:05.774 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 384 ms overall 17-03-18 06:47:05.854 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) end. Duration was 114 ms. 17-03-18 06:47:05.854 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:05.854 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms. 17-03-18 06:47:05.854 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms. 17-03-18 06:47:05.874 -07 000000437 INF: Image SNR check: start 17-03-18 06:47:05.874 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:47:05.874 -07 000000581 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:47:05.884 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:47:05.884 -07 000000561 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:47:05.884 -07 000000437 INF: Image SNR check: pass [peak (Max-Min)=112.89] 17-03-18 06:47:05.884 -07 000000437 INF: Autofocus start 17-03-18 06:47:05.884 -07 000000437 INF: MeasureProfile start 17-03-18 06:47:05.894 -07 000000437 INF: MeasureProfile done 17-03-18 06:47:05.894 -07 000000437 INF: X=0 Z correction [um]=-0.02394831 17-03-18 06:47:05.894 -07 000000437 INF: Autofocus finished 17-03-18 06:47:06.084 -07 000000581 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:47:06.084 -07 000000561 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 06:47:06.084 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.90966796875, Z-position -0.13923623255648. ---------- 17-03-18 06:47:06.084 -07 000000610 INF: Cycle 153 Tile 1 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:06.094 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28922, sync = True, waitForSettling = True) 17-03-18 06:47:06.094 -07 000000610 INF: Z Motor: Moving to -0.132396 mm, started at -0.139236 mm, distance = 6.84 um 17-03-18 06:47:06.094 -07 000000610 INF: FPGA: Xmit ZDACW 28922\n [Z Motor] 17-03-18 06:47:06.094 -07 000000591 INF: FPGA: Recv ZDACW 17-03-18 06:47:06.104 -07 000000610 INF: FPGA: 'ZDACW 28922' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.104 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:06.104 -07 000000626 INF: FPGA: Recv ZDACR 28922 17-03-18 06:47:06.114 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.114 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:06.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:06.264 -07 000000480 INF: FPGA: Recv ZSGSRD 29900 17-03-18 06:47:06.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:06.274 -07 000000626 INF: FPGA: Recv ZSGSRD 29895 17-03-18 06:47:06.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:06.284 -07 000000480 INF: FPGA: Recv ZSGSRD 29904 17-03-18 06:47:06.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:06.294 -07 000000626 INF: FPGA: Recv ZSGSRD 29893 17-03-18 06:47:06.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:06.304 -07 000000480 INF: FPGA: Recv ZSGSRD 29901 17-03-18 06:47:06.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:06.314 -07 000000480 INF: FPGA: Recv ZSGSRD 29906 17-03-18 06:47:06.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:06.324 -07 000000591 INF: FPGA: Recv ZSGSRD 29896 17-03-18 06:47:06.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:06.334 -07 000000591 INF: FPGA: Recv ZSGSRD 29902 17-03-18 06:47:06.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:06.344 -07 000000591 INF: FPGA: Recv ZSGSRD 29893 17-03-18 06:47:06.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:06.354 -07 000000561 INF: FPGA: Recv ZSGSRD 29900 17-03-18 06:47:06.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.364 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:06.364 -07 000000591 INF: FPGA: Recv ZPIEZORD 25242 17-03-18 06:47:06.374 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:06.374 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.413 V. Piezo Error = -10.2 V. 17-03-18 06:47:06.374 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29899 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29900 (-131.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29893 (-131.6 uncal um), Max = 29906 (-131.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:47:06.374 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29899, posNoise = 7, negNoise = 6 17-03-18 06:47:06.374 -07 000000610 INF: Z Motor: After move to -0.132396, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:06.374 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-18 06:47:06.374 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:06.374 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:06.374 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:06.374 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:06.374 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:06.374 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:06.374 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:06.374 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:06.374 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:06.374 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:06.374 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:06.374 -07 000000461 INF: Camera: sBCa_SetPowerMode(785074704, 1) start. 17-03-18 06:47:06.374 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 06:47:06.374 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:06.384 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 06:47:06.384 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 06:47:06.394 -07 000000461 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms. 17-03-18 06:47:06.394 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:06.394 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:47:06.394 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:06.404 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 06:47:06.404 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 32 ms. 17-03-18 06:47:06.414 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 29098 150\n [Camera] 17-03-18 06:47:06.614 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:06.894 -07 000000581 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:06.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:07.074 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:07.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:07.074 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:07.074 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:07.074 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 648609776, 0x0, 391868352) start. 17-03-18 06:47:07.084 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:07.084 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:07.084 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:07.084 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:07.084 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2619673760, 0x0, 418435064) start. 17-03-18 06:47:07.274 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29098 851 17-03-18 06:47:07.424 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:07.454 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2619673760, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 06:47:07.464 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 06:47:07.464 -07 000000461 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:07.464 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:07.464 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 648609776, 0x0, 391868352) end. Duration was 386 ms. 17-03-18 06:47:07.464 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 06:47:07.464 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:07.474 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:07.474 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 06:47:07.474 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 06:47:07.644 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:07.644 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:07.644 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:07.644 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:07.644 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 06:47:07.644 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:07.644 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:07.644 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:07.644 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:07.644 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start. 17-03-18 06:47:07.834 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:47:07.834 -07 000000461 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:07.834 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 29098 150' command took 2 ms to send, 1417 ms to get response, and 1425 ms overall 17-03-18 06:47:07.844 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 06:47:07.844 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 2 at Y-position 59.90966796875, Z-Position -0.132400870837646. ------ 17-03-18 06:47:07.844 -07 000000461 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:47:07.844 -07 000000590 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13874 mm 17-03-18 06:47:07.844 -07 000000590 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:07.844 -07 000000487 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True) 17-03-18 06:47:07.844 -07 000000487 INF: Y Motor: Moving to 60.7426 mm, started at 59.9097 mm, delta = 0.8329 mm 17-03-18 06:47:07.844 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 30308, sync = True, waitForSettling = False) 17-03-18 06:47:07.844 -07 000000437 INF: Z Motor: Moving to -0.138741 mm, started at -0.132401 mm, distance = -6.34 um 17-03-18 06:47:07.854 -07 000000437 INF: FPGA: Xmit ZDACW 30308\n [Z Motor] 17-03-18 06:47:07.864 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:08.054 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 404 ms. 17-03-18 06:47:08.054 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-18 06:47:08.054 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:08.054 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 402 ms. 17-03-18 06:47:08.054 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-18 06:47:08.054 -07 000000581 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:08.054 -07 000000581 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:08.054 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-18 06:47:08.054 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 412 ms. 17-03-18 06:47:08.064 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms. 17-03-18 06:47:08.064 -07 000000447 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:47:08.064 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 06:47:08.064 -07 000000447 INF: FPGA: Recv YRDPOS 122695 17-03-18 06:47:08.064 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 199 ms to get response, and 222 ms overall 17-03-18 06:47:08.064 -07 000000461 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 219 ms to get response, and 224 ms overall 17-03-18 06:47:08.074 -07 000000487 INF: Y Motor: Encoder = 122695 = motor step 95855.5 = 59.9097 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:08.074 -07 000000487 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:08.074 -07 000000437 INF: FPGA: 'ZDACW 30308' command took 0 ms to send, 209 ms to get response, and 221 ms overall 17-03-18 06:47:08.074 -07 000000487 INF: Y Motor: Moving 1333 steps0 17-03-18 06:47:08.074 -07 000000461 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:47:08.084 -07 000000487 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:08.094 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:08.094 -07 000000447 INF: FPGA: Recv ZDACR 30308 17-03-18 06:47:08.104 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:47:08.104 -07 000000437 INF: Z Motor: MoveAbsStepped took 252 ms (did NOT wait for settling yet)) 17-03-18 06:47:08.274 -07 000000447 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:47:08.274 -07 000000461 INF: FPGA: 'FOCMRRFOC' command took 3 ms to send, 196 ms to get response, and 206 ms overall 17-03-18 06:47:08.454 -07 000000447 INF: FPGA: Recv YMVTILE 17-03-18 06:47:08.454 -07 000000487 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall 17-03-18 06:47:08.504 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:08.504 -07 000000581 INF: FPGA: Recv YRDPOS 124378 17-03-18 06:47:08.514 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:08.514 -07 000000487 INF: Y Motor: Encoder = 124378 = motor step 97170.3 = 60.7314 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:08.514 -07 000000487 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm) 17-03-18 06:47:08.514 -07 000000487 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.833 mm, average velocity = 2.152 mm/sec 17-03-18 06:47:09.354 -07 000000581 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.001704, 17-03-18 06:47:09.464 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:09.464 -07 000000437 INF: FPGA: Recv YRDPOS 124379 17-03-18 06:47:09.474 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:09.474 -07 000000487 INF: Y Motor: Encoder = 124379 = motor step 97171.1 = 60.7319 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:09.504 -07 000000487 INF: Y Motor: After move to 60.742607, error = -0.010674, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:09.504 -07 000000487 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 06:47:09.504 -07 000000487 INF: Y Motor: Moved to 60.7319 after 1658 ms (table move) 17-03-18 06:47:09.504 -07 000000590 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138741 mm (DAC = 30308) 17-03-18 06:47:09.504 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:09.514 -07 000000512 INF: FPGA: Recv ZSGSRD 30883 17-03-18 06:47:09.514 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 06:47:09.514 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:09.514 -07 000000462 INF: FPGA: Recv ZSGSRD 30890 17-03-18 06:47:09.524 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:47:09.524 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:09.524 -07 000000487 INF: FPGA: Recv ZSGSRD 30877 17-03-18 06:47:09.534 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:09.534 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:09.534 -07 000000581 INF: FPGA: Recv ZSGSRD 30883 17-03-18 06:47:09.544 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:09.544 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:09.544 -07 000000512 INF: FPGA: Recv ZSGSRD 30887 17-03-18 06:47:09.554 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:09.554 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:09.554 -07 000000581 INF: FPGA: Recv ZSGSRD 30887 17-03-18 06:47:09.564 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:09.564 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:09.564 -07 000000512 INF: FPGA: Recv ZSGSRD 30892 17-03-18 06:47:09.574 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:09.574 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:09.574 -07 000000437 INF: FPGA: Recv ZSGSRD 30891 17-03-18 06:47:09.584 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:09.584 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:09.584 -07 000000512 INF: FPGA: Recv ZSGSRD 30886 17-03-18 06:47:09.594 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:09.594 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:09.594 -07 000000447 INF: FPGA: Recv ZSGSRD 30883 17-03-18 06:47:09.604 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:09.604 -07 000000590 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:09.604 -07 000000512 INF: FPGA: Recv ZPIEZORD 26606 17-03-18 06:47:09.614 -07 000000590 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:09.614 -07 000000590 INF: Z Motor: Piezo is near 36.8 V (nominally 0 to 100 V), expect near 46.2 V, since DAC is at 4.625 V. Piezo Error = -9.4 V. 17-03-18 06:47:09.614 -07 000000590 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.7 um, Read 10 ADC samples: Avg = 30886 (-137.9 uncal um), Error = 0.8 uncal um, Median = 30886 (-137.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30877 (-137.9 uncal um), Max = 30892 (-138.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 06:47:09.614 -07 000000590 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30886, posNoise = 6, negNoise = 9 17-03-18 06:47:09.614 -07 000000590 INF: Z Motor: After move to -0.138741, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:09.614 -07 000000590 INF: Z Motor: Settle wait time = 1661 ms, measure time = 103 ms (allowed 150 ms), total time = 1764 ms 17-03-18 06:47:09.614 -07 000000590 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:09.664 -07 000000590 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1815 ms 17-03-18 06:47:09.664 -07 000000590 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:09.664 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:09.664 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:09.664 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:09.664 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:09.664 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:47:09.664 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:09.664 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 06:47:09.664 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:47:09.664 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 06:47:09.664 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:47:09.684 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms. 17-03-18 06:47:09.684 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms. 17-03-18 06:47:09.694 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:47:09.734 -07 000000512 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:47:10.034 -07 000000487 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:47:10.034 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:47:10.034 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:47:10.034 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2671971088, 0x0, 559484976) start. 17-03-18 06:47:10.074 -07 000000462 INF: FPGA: Recv @CAMSNAP 380 17-03-18 06:47:10.074 -07 000000437 INF: FPGA: Recv CAMSNAP 17-03-18 06:47:10.074 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 374 ms to get response, and 390 ms overall 17-03-18 06:47:10.164 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2671971088, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 06:47:10.164 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:10.164 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms. 17-03-18 06:47:10.164 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms. 17-03-18 06:47:10.174 -07 000000462 INF: Autofocus start 17-03-18 06:47:10.174 -07 000000462 INF: MeasureProfile start 17-03-18 06:47:10.174 -07 000000581 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:47:10.174 -07 000000461 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:47:10.184 -07 000000581 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:47:10.184 -07 000000581 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:47:10.184 -07 000000462 INF: MeasureProfile done 17-03-18 06:47:10.184 -07 000000462 INF: X=16 Z correction [um]=0.0530179 17-03-18 06:47:10.184 -07 000000462 INF: Autofocus finished 17-03-18 06:47:10.384 -07 000000461 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:47:10.384 -07 000000581 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 06:47:10.384 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73193359375, Z-position -0.138741568221564. ---------- 17-03-18 06:47:10.384 -07 000000610 INF: Cycle 153 Tile 2 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:10.394 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28832, sync = True, waitForSettling = True) 17-03-18 06:47:10.394 -07 000000610 INF: Z Motor: Moving to -0.131984 mm, started at -0.138742 mm, distance = 6.76 um 17-03-18 06:47:10.394 -07 000000610 INF: FPGA: Xmit ZDACW 28832\n [Z Motor] 17-03-18 06:47:10.394 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 06:47:10.404 -07 000000610 INF: FPGA: 'ZDACW 28832' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.404 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:10.404 -07 000000437 INF: FPGA: Recv ZDACR 28832 17-03-18 06:47:10.414 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.414 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:10.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:10.564 -07 000000581 INF: FPGA: Recv ZSGSRD 29831 17-03-18 06:47:10.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:10.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:10.574 -07 000000512 INF: FPGA: Recv ZSGSRD 29841 17-03-18 06:47:10.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:10.584 -07 000000461 INF: FPGA: Recv ZSGSRD 29835 17-03-18 06:47:10.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:10.594 -07 000000437 INF: FPGA: Recv ZSGSRD 29836 17-03-18 06:47:10.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:10.604 -07 000000590 INF: FPGA: Recv ZSGSRD 29832 17-03-18 06:47:10.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:10.614 -07 000000462 INF: FPGA: Recv ZSGSRD 29836 17-03-18 06:47:10.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:10.624 -07 000000461 INF: FPGA: Recv ZSGSRD 29834 17-03-18 06:47:10.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:10.634 -07 000000462 INF: FPGA: Recv ZSGSRD 29836 17-03-18 06:47:10.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:10.644 -07 000000590 INF: FPGA: Recv ZSGSRD 29835 17-03-18 06:47:10.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:10.654 -07 000000487 INF: FPGA: Recv ZSGSRD 29835 17-03-18 06:47:10.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.664 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:10.664 -07 000000447 INF: FPGA: Recv ZPIEZORD 25230 17-03-18 06:47:10.674 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:10.674 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.399 V. Piezo Error = -10.1 V. 17-03-18 06:47:10.674 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.0 um, Read 10 ADC samples: Avg = 29835 (-131.2 uncal um), Error = 0.8 uncal um, Median = 29835 (-131.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29831 (-131.2 uncal um), Max = 29841 (-131.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:47:10.674 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29835, posNoise = 6, negNoise = 4 17-03-18 06:47:10.674 -07 000000610 INF: Z Motor: After move to -0.131984, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:10.674 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-18 06:47:10.674 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:10.674 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:10.674 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:10.674 -07 000000581 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:10.674 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:10.674 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:10.674 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:10.674 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:10.674 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:10.674 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:10.674 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:10.674 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:10.674 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:10.684 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:10.684 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:47:10.684 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:10.694 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 06:47:10.694 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:47:10.694 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 06:47:10.694 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:47:10.704 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 29009 150\n [Camera] 17-03-18 06:47:10.904 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:11.364 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:11.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:11.364 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:11.374 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:11.374 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start. 17-03-18 06:47:11.374 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:11.374 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:11.374 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:11.374 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:11.374 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 06:47:11.564 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29009 851 17-03-18 06:47:11.714 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:11.774 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 400 ms. 17-03-18 06:47:11.774 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-18 06:47:11.774 -07 000000461 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:11.774 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 400 ms. 17-03-18 06:47:11.774 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-18 06:47:11.774 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:11.774 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:11.774 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-18 06:47:11.774 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:11.784 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms. 17-03-18 06:47:11.894 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:11.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:11.934 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:11.934 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:11.934 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:11.934 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:11.934 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start. 17-03-18 06:47:11.934 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:11.934 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:11.934 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:11.934 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:11.934 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start. 17-03-18 06:47:12.124 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:47:12.124 -07 000000581 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:12.124 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 29009 150' command took 2 ms to send, 1417 ms to get response, and 1427 ms overall 17-03-18 06:47:12.134 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.132898 17-03-18 06:47:12.134 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13290 mm 17-03-18 06:47:12.134 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:12.134 -07 000000487 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True) 17-03-18 06:47:12.134 -07 000000487 INF: Y Motor: Moving to 61.5726 mm, started at 60.7319 mm, delta = 0.8407 mm 17-03-18 06:47:12.134 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:12.134 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 29032, sync = True, waitForSettling = False) 17-03-18 06:47:12.134 -07 000000512 INF: Z Motor: Moving to -0.132900 mm, started at -0.131990 mm, distance = -0.91 um 17-03-18 06:47:12.134 -07 000000461 INF: FPGA: Recv YRDPOS 124379 17-03-18 06:47:12.144 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:47:12.144 -07 000000487 INF: Y Motor: Encoder = 124379 = motor step 97171.1 = 60.7319 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:12.144 -07 000000487 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:12.144 -07 000000487 INF: Y Motor: Moving 1345 steps-23 17-03-18 06:47:12.144 -07 000000512 INF: FPGA: Xmit ZDACW 29032\n [Z Motor] 17-03-18 06:47:12.144 -07 000000437 INF: FPGA: Recv ZDACW 17-03-18 06:47:12.154 -07 000000512 INF: FPGA: 'ZDACW 29032' command took 6 ms to send, 0 ms to get response, and 15 ms overall 17-03-18 06:47:12.154 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:12.154 -07 000000437 INF: FPGA: Recv ZDACR 29032 17-03-18 06:47:12.164 -07 000000487 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:12.164 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:12.164 -07 000000512 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet)) 17-03-18 06:47:12.334 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 391 ms. 17-03-18 06:47:12.334 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 06:47:12.334 -07 000000590 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:12.334 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 395 ms. 17-03-18 06:47:12.334 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-18 06:47:12.334 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:12.334 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:12.334 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-18 06:47:12.334 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-18 06:47:12.344 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-18 06:47:12.534 -07 000000447 INF: FPGA: Recv YMVTILE 17-03-18 06:47:12.534 -07 000000487 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 391 ms overall 17-03-18 06:47:12.594 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:12.594 -07 000000447 INF: FPGA: Recv YRDPOS 126080 17-03-18 06:47:12.604 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:12.604 -07 000000487 INF: Y Motor: Encoder = 126080 = motor step 98500.0 = 61.5625 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:12.604 -07 000000487 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm) 17-03-18 06:47:12.604 -07 000000487 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 392 ms, distance = 0.841 mm, average velocity = 2.145 mm/sec 17-03-18 06:47:13.554 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:13.554 -07 000000447 INF: FPGA: Recv YRDPOS 126080 17-03-18 06:47:13.564 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:13.564 -07 000000487 INF: Y Motor: Encoder = 126080 = motor step 98500.0 = 61.5625 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:13.594 -07 000000487 INF: Y Motor: After move to 61.572609, error = -0.010109, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:13.594 -07 000000487 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:47:13.594 -07 000000487 INF: Y Motor: Moved to 61.5625 after 1461 ms (table move) 17-03-18 06:47:13.594 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132900 mm (DAC = 29032) 17-03-18 06:47:13.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.604 -07 000000447 INF: FPGA: Recv ZSGSRD 29974 17-03-18 06:47:13.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:47:13.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.604 -07 000000462 INF: FPGA: Recv ZSGSRD 29977 17-03-18 06:47:13.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.614 -07 000000512 INF: FPGA: Recv ZSGSRD 29982 17-03-18 06:47:13.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.624 -07 000000590 INF: FPGA: Recv ZSGSRD 29978 17-03-18 06:47:13.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.634 -07 000000512 INF: FPGA: Recv ZSGSRD 29971 17-03-18 06:47:13.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.644 -07 000000462 INF: FPGA: Recv ZSGSRD 29976 17-03-18 06:47:13.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.654 -07 000000437 INF: FPGA: Recv ZSGSRD 29978 17-03-18 06:47:13.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.664 -07 000000590 INF: FPGA: Recv ZSGSRD 29982 17-03-18 06:47:13.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.674 -07 000000437 INF: FPGA: Recv ZSGSRD 29977 17-03-18 06:47:13.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.684 -07 000000447 INF: FPGA: Recv ZSGSRD 29983 17-03-18 06:47:13.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.694 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:13.694 -07 000000487 INF: FPGA: Recv ZPIEZORD 25455 17-03-18 06:47:13.704 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.704 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.430 V. Piezo Error = -9.9 V. 17-03-18 06:47:13.704 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.9 um, Read 10 ADC samples: Avg = 29978 (-132.1 uncal um), Error = 0.8 uncal um, Median = 29978 (-132.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29971 (-132.1 uncal um), Max = 29983 (-132.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 06:47:13.704 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29978, posNoise = 5, negNoise = 7 17-03-18 06:47:13.704 -07 000000610 INF: Z Motor: After move to -0.132900, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:13.704 -07 000000610 INF: Z Motor: Settle wait time = 1463 ms, measure time = 103 ms (allowed 150 ms), total time = 1566 ms 17-03-18 06:47:13.704 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:13.754 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1618 ms 17-03-18 06:47:13.754 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:13.754 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.5625, Z-position -0.132908383596845. ---------- 17-03-18 06:47:13.754 -07 000000610 INF: Cycle 153 Tile 3 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:13.754 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28855, sync = True, waitForSettling = True) 17-03-18 06:47:13.754 -07 000000610 INF: Z Motor: Moving to -0.132090 mm, started at -0.132908 mm, distance = 0.82 um 17-03-18 06:47:13.754 -07 000000610 INF: FPGA: Xmit ZDACW 28855\n [Z Motor] 17-03-18 06:47:13.754 -07 000000462 INF: FPGA: Recv ZDACW 17-03-18 06:47:13.764 -07 000000610 INF: FPGA: 'ZDACW 28855' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:47:13.764 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:13.764 -07 000000437 INF: FPGA: Recv ZDACR 28855 17-03-18 06:47:13.774 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.774 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:13.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.924 -07 000000487 INF: FPGA: Recv ZSGSRD 29848 17-03-18 06:47:13.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:13.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.934 -07 000000437 INF: FPGA: Recv ZSGSRD 29849 17-03-18 06:47:13.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.944 -07 000000487 INF: FPGA: Recv ZSGSRD 29859 17-03-18 06:47:13.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.954 -07 000000447 INF: FPGA: Recv ZSGSRD 29849 17-03-18 06:47:13.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.964 -07 000000462 INF: FPGA: Recv ZSGSRD 29843 17-03-18 06:47:13.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.974 -07 000000437 INF: FPGA: Recv ZSGSRD 29852 17-03-18 06:47:13.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.984 -07 000000487 INF: FPGA: Recv ZSGSRD 29860 17-03-18 06:47:13.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:13.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:13.994 -07 000000590 INF: FPGA: Recv ZSGSRD 29856 17-03-18 06:47:14.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:14.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:14.004 -07 000000487 INF: FPGA: Recv ZSGSRD 29844 17-03-18 06:47:14.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:14.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:14.014 -07 000000590 INF: FPGA: Recv ZSGSRD 29856 17-03-18 06:47:14.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:14.024 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:14.024 -07 000000447 INF: FPGA: Recv ZPIEZORD 25335 17-03-18 06:47:14.034 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:14.034 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.403 V. Piezo Error = -9.9 V. 17-03-18 06:47:14.034 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.1 um, Read 10 ADC samples: Avg = 29852 (-131.3 uncal um), Error = 0.8 uncal um, Median = 29850 (-131.3 uncal um), StdDev = 6 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29843 (-131.3 uncal um), Max = 29860 (-131.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 06:47:14.034 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29852, posNoise = 8, negNoise = 9 17-03-18 06:47:14.034 -07 000000610 INF: Z Motor: After move to -0.132090, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:14.034 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 06:47:14.034 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:14.034 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:14.034 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:14.034 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:14.034 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:14.034 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:14.034 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:14.034 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:14.044 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:14.044 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:14.044 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:14.044 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:14.044 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-18 06:47:14.044 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 06:47:14.044 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:14.044 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:14.064 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 06:47:14.064 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:47:14.064 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 06:47:14.064 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 06:47:14.064 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 29032 150\n [Camera] 17-03-18 06:47:14.264 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:14.724 -07 000000474 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.969015, 17-03-18 06:47:14.734 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:14.734 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:14.734 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:14.734 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:14.734 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start. 17-03-18 06:47:14.734 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:14.734 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:14.734 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:14.734 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:14.734 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start. 17-03-18 06:47:14.924 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29032 851 17-03-18 06:47:15.074 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:15.114 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 378 ms. 17-03-18 06:47:15.114 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms. 17-03-18 06:47:15.114 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:15.114 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 06:47:15.114 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 06:47:15.114 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:15.114 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:15.114 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 06:47:15.114 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:15.124 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 06:47:15.294 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:15.294 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:15.294 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:15.294 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:15.294 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start. 17-03-18 06:47:15.304 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:15.304 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:15.304 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:15.304 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:15.304 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start. 17-03-18 06:47:15.484 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:47:15.494 -07 000000512 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:15.494 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 29032 150' command took 2 ms to send, 1421 ms to get response, and 1427 ms overall 17-03-18 06:47:15.494 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.132438 17-03-18 06:47:15.494 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13244 mm 17-03-18 06:47:15.494 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:15.494 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True) 17-03-18 06:47:15.494 -07 000000590 INF: Y Motor: Moving to 62.4026 mm, started at 61.5625 mm, delta = 0.8401 mm 17-03-18 06:47:15.494 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 28931, sync = True, waitForSettling = False) 17-03-18 06:47:15.494 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:15.494 -07 000000462 INF: Z Motor: Moving to -0.132438 mm, started at -0.132099 mm, distance = -0.34 um 17-03-18 06:47:15.494 -07 000000447 INF: FPGA: Recv YRDPOS 126080 17-03-18 06:47:15.504 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:47:15.504 -07 000000590 INF: Y Motor: Encoder = 126080 = motor step 98500.0 = 61.5625 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:15.504 -07 000000590 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:15.504 -07 000000590 INF: Y Motor: Moving 1344 steps-21 17-03-18 06:47:15.504 -07 000000462 INF: FPGA: Xmit ZDACW 28931\n [Z Motor] 17-03-18 06:47:15.504 -07 000000625 INF: FPGA: Recv ZDACW 17-03-18 06:47:15.514 -07 000000462 INF: FPGA: 'ZDACW 28931' command took 2 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 06:47:15.514 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:15.514 -07 000000487 INF: FPGA: Recv ZDACR 28931 17-03-18 06:47:15.524 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:15.524 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:15.524 -07 000000462 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet)) 17-03-18 06:47:15.704 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 403 ms. 17-03-18 06:47:15.704 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-18 06:47:15.704 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:15.704 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 402 ms. 17-03-18 06:47:15.704 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-18 06:47:15.704 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:15.704 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:15.704 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms. 17-03-18 06:47:15.704 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:15.714 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms. 17-03-18 06:47:15.894 -07 000000512 INF: FPGA: Recv YMVTILE 17-03-18 06:47:15.894 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall 17-03-18 06:47:15.954 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:15.954 -07 000000512 INF: FPGA: Recv YRDPOS 127783 17-03-18 06:47:15.964 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:15.964 -07 000000590 INF: Y Motor: Encoder = 127783 = motor step 99830.5 = 62.3940 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:15.964 -07 000000590 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm) 17-03-18 06:47:15.964 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.840 mm, average velocity = 2.116 mm/sec 17-03-18 06:47:16.894 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:16.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:16.914 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:16.914 -07 000000512 INF: FPGA: Recv YRDPOS 127784 17-03-18 06:47:16.924 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:16.924 -07 000000590 INF: Y Motor: Encoder = 127784 = motor step 99831.3 = 62.3945 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:16.954 -07 000000590 INF: Y Motor: After move to 62.402607, error = -0.008076, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:16.954 -07 000000590 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 06:47:16.954 -07 000000590 INF: Y Motor: Moved to 62.3945 after 1456 ms (table move) 17-03-18 06:47:16.954 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132438 mm (DAC = 28931) 17-03-18 06:47:16.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:16.954 -07 000000462 INF: FPGA: Recv ZSGSRD 29903 17-03-18 06:47:16.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:47:16.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:16.964 -07 000000462 INF: FPGA: Recv ZSGSRD 29904 17-03-18 06:47:16.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:16.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:16.974 -07 000000447 INF: FPGA: Recv ZSGSRD 29903 17-03-18 06:47:16.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:16.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:16.984 -07 000000512 INF: FPGA: Recv ZSGSRD 29898 17-03-18 06:47:16.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:16.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:16.994 -07 000000447 INF: FPGA: Recv ZSGSRD 29906 17-03-18 06:47:17.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.004 -07 000000626 INF: FPGA: Recv ZSGSRD 29906 17-03-18 06:47:17.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.014 -07 000000487 INF: FPGA: Recv ZSGSRD 29913 17-03-18 06:47:17.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.024 -07 000000487 INF: FPGA: Recv ZSGSRD 29913 17-03-18 06:47:17.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.034 -07 000000626 INF: FPGA: Recv ZSGSRD 29901 17-03-18 06:47:17.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.044 -07 000000487 INF: FPGA: Recv ZSGSRD 29903 17-03-18 06:47:17.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.054 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:17.054 -07 000000487 INF: FPGA: Recv ZPIEZORD 25410 17-03-18 06:47:17.064 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.064 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.415 V. Piezo Error = -9.9 V. 17-03-18 06:47:17.064 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29905 (-131.7 uncal um), Error = 0.8 uncal um, Median = 29904 (-131.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29898 (-131.6 uncal um), Max = 29913 (-131.7 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 06:47:17.064 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29905, posNoise = 8, negNoise = 7 17-03-18 06:47:17.064 -07 000000610 INF: Z Motor: After move to -0.132438, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:17.064 -07 000000610 INF: Z Motor: Settle wait time = 1458 ms, measure time = 106 ms (allowed 150 ms), total time = 1564 ms 17-03-18 06:47:17.064 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:17.114 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1616 ms 17-03-18 06:47:17.114 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:17.114 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39453125, Z-position -0.132439416110496. ---------- 17-03-18 06:47:17.114 -07 000000610 INF: Cycle 153 Tile 4 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:17.114 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28754, sync = True, waitForSettling = True) 17-03-18 06:47:17.114 -07 000000610 INF: Z Motor: Moving to -0.131627 mm, started at -0.132439 mm, distance = 0.81 um 17-03-18 06:47:17.114 -07 000000610 INF: FPGA: Xmit ZDACW 28754\n [Z Motor] 17-03-18 06:47:17.114 -07 000000462 INF: FPGA: Recv ZDACW 17-03-18 06:47:17.124 -07 000000610 INF: FPGA: 'ZDACW 28754' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:47:17.124 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:17.124 -07 000000512 INF: FPGA: Recv ZDACR 28754 17-03-18 06:47:17.134 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.134 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:17.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.284 -07 000000462 INF: FPGA: Recv ZSGSRD 29777 17-03-18 06:47:17.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:17.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.294 -07 000000512 INF: FPGA: Recv ZSGSRD 29779 17-03-18 06:47:17.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.304 -07 000000512 INF: FPGA: Recv ZSGSRD 29780 17-03-18 06:47:17.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.314 -07 000000625 INF: FPGA: Recv ZSGSRD 29779 17-03-18 06:47:17.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.324 -07 000000474 INF: FPGA: Recv ZSGSRD 29784 17-03-18 06:47:17.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.334 -07 000000447 INF: FPGA: Recv ZSGSRD 29786 17-03-18 06:47:17.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.344 -07 000000474 INF: FPGA: Recv ZSGSRD 29777 17-03-18 06:47:17.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.354 -07 000000455 INF: FPGA: Recv ZSGSRD 29775 17-03-18 06:47:17.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.364 -07 000000487 INF: FPGA: Recv ZSGSRD 29777 17-03-18 06:47:17.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:17.374 -07 000000447 INF: FPGA: Recv ZSGSRD 29775 17-03-18 06:47:17.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.384 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:17.384 -07 000000487 INF: FPGA: Recv ZPIEZORD 25240 17-03-18 06:47:17.394 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:17.394 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.388 V. Piezo Error = -10.0 V. 17-03-18 06:47:17.394 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.6 um, Read 10 ADC samples: Avg = 29779 (-130.8 uncal um), Error = 0.8 uncal um, Median = 29778 (-130.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29775 (-130.8 uncal um), Max = 29786 (-130.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:47:17.394 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29779, posNoise = 7, negNoise = 4 17-03-18 06:47:17.394 -07 000000610 INF: Z Motor: After move to -0.131627, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:17.394 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 06:47:17.394 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:17.394 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:17.394 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:17.394 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:17.394 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:17.394 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:17.394 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:17.394 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:17.394 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:17.394 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:17.394 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:17.394 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:17.394 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:17.394 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:17.404 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:47:17.404 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:17.414 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 06:47:17.414 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 06:47:17.414 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 06:47:17.414 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:47:17.424 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28931 150\n [Camera] 17-03-18 06:47:17.614 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:18.084 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:18.084 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:18.084 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:18.084 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:18.084 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start. 17-03-18 06:47:18.084 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:18.084 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:18.084 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:18.084 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:18.084 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start. 17-03-18 06:47:18.274 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28931 851 17-03-18 06:47:18.424 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:18.464 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 06:47:18.464 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 06:47:18.464 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:18.464 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 06:47:18.464 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 06:47:18.464 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:18.464 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:18.464 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 06:47:18.474 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:18.474 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 06:47:18.654 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:18.654 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:18.654 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:18.654 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:18.654 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start. 17-03-18 06:47:18.654 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:18.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:18.654 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:18.654 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:18.654 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start. 17-03-18 06:47:18.844 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:47:18.844 -07 000000474 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:18.844 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28931 150' command took 2 ms to send, 1414 ms to get response, and 1424 ms overall 17-03-18 06:47:18.844 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.132180 17-03-18 06:47:18.844 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13218 mm 17-03-18 06:47:18.844 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:18.844 -07 000000447 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True) 17-03-18 06:47:18.844 -07 000000447 INF: Y Motor: Moving to 63.2326 mm, started at 62.3945 mm, delta = 0.8381 mm 17-03-18 06:47:18.844 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:18.844 -07 000000474 INF: Z Motor: Entering MoveAbsStepped (DAC = 28875, sync = True, waitForSettling = False) 17-03-18 06:47:18.854 -07 000000474 INF: Z Motor: Moving to -0.132181 mm, started at -0.131630 mm, distance = -0.55 um 17-03-18 06:47:18.854 -07 000000474 INF: FPGA: Xmit ZDACW 28875\n [Z Motor] 17-03-18 06:47:18.854 -07 000000455 INF: FPGA: Recv YRDPOS 127784 17-03-18 06:47:18.854 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 06:47:18.854 -07 000000447 INF: Y Motor: Encoder = 127784 = motor step 99831.3 = 62.3945 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:18.854 -07 000000447 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:18.854 -07 000000447 INF: Y Motor: Moving 1341 steps-18 17-03-18 06:47:18.854 -07 000000455 INF: FPGA: Recv ZDACW 17-03-18 06:47:18.864 -07 000000474 INF: FPGA: 'ZDACW 28875' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:18.864 -07 000000474 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:18.864 -07 000000455 INF: FPGA: Recv ZDACR 28875 17-03-18 06:47:18.874 -07 000000447 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:18.874 -07 000000474 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:18.874 -07 000000474 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet)) 17-03-18 06:47:19.034 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 384 ms. 17-03-18 06:47:19.034 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 06:47:19.034 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:19.044 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 382 ms. 17-03-18 06:47:19.044 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms. 17-03-18 06:47:19.044 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:19.044 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:19.044 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-18 06:47:19.044 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:19.054 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms. 17-03-18 06:47:19.244 -07 000000512 INF: FPGA: Recv YMVTILE 17-03-18 06:47:19.244 -07 000000447 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall 17-03-18 06:47:19.444 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:19.444 -07 000000437 INF: FPGA: Recv YRDPOS 129479 17-03-18 06:47:19.454 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:47:19.454 -07 000000447 INF: Y Motor: Encoder = 129479 = motor step 101155.5 = 63.2222 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:19.454 -07 000000447 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm) 17-03-18 06:47:19.454 -07 000000447 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.838 mm, average velocity = 2.122 mm/sec 17-03-18 06:47:20.094 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.990831, 17-03-18 06:47:20.414 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:20.414 -07 000000480 INF: FPGA: Recv YRDPOS 129479 17-03-18 06:47:20.424 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:47:20.424 -07 000000447 INF: Y Motor: Encoder = 129479 = motor step 101155.5 = 63.2222 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:20.454 -07 000000447 INF: Y Motor: After move to 63.232609, error = -0.010441, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:20.454 -07 000000447 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:47:20.454 -07 000000447 INF: Y Motor: Moved to 63.2222 after 1605 ms (table move) 17-03-18 06:47:20.454 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132181 mm (DAC = 28875) 17-03-18 06:47:20.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.464 -07 000000474 INF: FPGA: Recv ZSGSRD 29869 17-03-18 06:47:20.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-18 06:47:20.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.474 -07 000000447 INF: FPGA: Recv ZSGSRD 29865 17-03-18 06:47:20.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.484 -07 000000474 INF: FPGA: Recv ZSGSRD 29867 17-03-18 06:47:20.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.494 -07 000000591 INF: FPGA: Recv ZSGSRD 29864 17-03-18 06:47:20.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.504 -07 000000487 INF: FPGA: Recv ZSGSRD 29865 17-03-18 06:47:20.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.514 -07 000000474 INF: FPGA: Recv ZSGSRD 29865 17-03-18 06:47:20.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.524 -07 000000437 INF: FPGA: Recv ZSGSRD 29861 17-03-18 06:47:20.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.534 -07 000000462 INF: FPGA: Recv ZSGSRD 29866 17-03-18 06:47:20.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.544 -07 000000512 INF: FPGA: Recv ZSGSRD 29861 17-03-18 06:47:20.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.554 -07 000000462 INF: FPGA: Recv ZSGSRD 29865 17-03-18 06:47:20.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.564 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:20.564 -07 000000512 INF: FPGA: Recv ZPIEZORD 25365 17-03-18 06:47:20.574 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.574 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.406 V. Piezo Error = -9.9 V. 17-03-18 06:47:20.574 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29865 (-131.4 uncal um), Error = 0.8 uncal um, Median = 29865 (-131.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29861 (-131.4 uncal um), Max = 29869 (-131.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:47:20.574 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29865, posNoise = 4, negNoise = 4 17-03-18 06:47:20.574 -07 000000610 INF: Z Motor: After move to -0.132181, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:20.574 -07 000000610 INF: Z Motor: Settle wait time = 1607 ms, measure time = 113 ms (allowed 150 ms), total time = 1720 ms 17-03-18 06:47:20.574 -07 000000610 INF: Z Motor: Waiting extra 37 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:20.614 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1762 ms 17-03-18 06:47:20.614 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:20.614 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22216796875, Z-position -0.132182447624826. ---------- 17-03-18 06:47:20.614 -07 000000610 INF: Cycle 153 Tile 5 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:20.614 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28698, sync = True, waitForSettling = True) 17-03-18 06:47:20.614 -07 000000610 INF: Z Motor: Moving to -0.131371 mm, started at -0.132182 mm, distance = 0.81 um 17-03-18 06:47:20.614 -07 000000610 INF: FPGA: Xmit ZDACW 28698\n [Z Motor] 17-03-18 06:47:20.614 -07 000000437 INF: FPGA: Recv ZDACW 17-03-18 06:47:20.624 -07 000000610 INF: FPGA: 'ZDACW 28698' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:47:20.624 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:20.624 -07 000000455 INF: FPGA: Recv ZDACR 28698 17-03-18 06:47:20.634 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.634 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:20.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.784 -07 000000437 INF: FPGA: Recv ZSGSRD 29737 17-03-18 06:47:20.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:20.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.794 -07 000000455 INF: FPGA: Recv ZSGSRD 29737 17-03-18 06:47:20.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.804 -07 000000437 INF: FPGA: Recv ZSGSRD 29739 17-03-18 06:47:20.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.814 -07 000000455 INF: FPGA: Recv ZSGSRD 29743 17-03-18 06:47:20.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.824 -07 000000437 INF: FPGA: Recv ZSGSRD 29734 17-03-18 06:47:20.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.834 -07 000000455 INF: FPGA: Recv ZSGSRD 29737 17-03-18 06:47:20.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.844 -07 000000447 INF: FPGA: Recv ZSGSRD 29740 17-03-18 06:47:20.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.854 -07 000000455 INF: FPGA: Recv ZSGSRD 29737 17-03-18 06:47:20.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.864 -07 000000447 INF: FPGA: Recv ZSGSRD 29741 17-03-18 06:47:20.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:20.874 -07 000000455 INF: FPGA: Recv ZSGSRD 29737 17-03-18 06:47:20.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.884 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:20.884 -07 000000447 INF: FPGA: Recv ZPIEZORD 25226 17-03-18 06:47:20.894 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:20.894 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.379 V. Piezo Error = -9.9 V. 17-03-18 06:47:20.894 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29738 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29737 (-130.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29734 (-130.6 uncal um), Max = 29743 (-130.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:47:20.894 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29738, posNoise = 5, negNoise = 4 17-03-18 06:47:20.894 -07 000000610 INF: Z Motor: After move to -0.131371, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:20.894 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms) 17-03-18 06:47:20.894 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:20.894 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:20.894 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:20.894 -07 000000474 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:20.894 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:20.894 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:20.894 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:20.894 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:20.894 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 06:47:20.894 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:20.894 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:20.894 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:20.904 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:47:20.904 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:20.904 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:20.904 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:20.914 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms. 17-03-18 06:47:20.914 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms. 17-03-18 06:47:20.914 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms. 17-03-18 06:47:20.914 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms. 17-03-18 06:47:20.914 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28875 150\n [Camera] 17-03-18 06:47:21.114 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:21.584 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:21.584 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:21.584 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:21.584 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:21.584 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:21.584 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:21.584 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:21.584 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-18 06:47:21.594 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:21.594 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:47:21.774 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28875 851 17-03-18 06:47:21.894 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:21.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:21.924 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:21.964 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 373 ms. 17-03-18 06:47:21.964 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 06:47:21.964 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:21.964 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 06:47:21.964 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 06:47:21.964 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:21.964 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:21.964 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 06:47:21.964 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:21.974 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 06:47:22.144 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:22.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:22.154 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:22.154 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:22.154 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:22.154 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:22.154 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:22.154 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start. 17-03-18 06:47:22.154 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:22.154 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start. 17-03-18 06:47:22.344 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:47:22.344 -07 000000480 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:22.344 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28875 150' command took 2 ms to send, 1421 ms to get response, and 1424 ms overall 17-03-18 06:47:22.344 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 06:47:22.344 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 6 at Y-position 63.22216796875, Z-Position -0.131366572682822. ------ 17-03-18 06:47:22.344 -07 000000581 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:47:22.344 -07 000000561 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13783 mm 17-03-18 06:47:22.344 -07 000000561 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:22.354 -07 000000461 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:47:22.354 -07 000000581 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 06:47:22.354 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 30109, sync = True, waitForSettling = False) 17-03-18 06:47:22.354 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True) 17-03-18 06:47:22.354 -07 000000447 INF: Z Motor: Moving to -0.137830 mm, started at -0.131367 mm, distance = -6.46 um 17-03-18 06:47:22.354 -07 000000512 INF: Y Motor: Moving to 64.0626 mm, started at 63.2222 mm, delta = 0.8404 mm 17-03-18 06:47:22.354 -07 000000581 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:47:22.364 -07 000000447 INF: FPGA: Xmit ZDACW 30109\n [Z Motor] 17-03-18 06:47:22.364 -07 000000591 INF: FPGA: Recv ZDACW 17-03-18 06:47:22.374 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:22.374 -07 000000447 INF: FPGA: 'ZDACW 30109' command took 0 ms to send, 0 ms to get response, and 17 ms overall 17-03-18 06:47:22.384 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:22.534 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 377 ms. 17-03-18 06:47:22.534 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 06:47:22.534 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:22.534 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 06:47:22.534 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 06:47:22.534 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:22.534 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:22.534 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 06:47:22.544 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:22.544 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 06:47:22.584 -07 000000487 INF: FPGA: Recv YRDPOS 129480 17-03-18 06:47:22.584 -07 000000487 INF: FPGA: Recv ZDACR 30109 17-03-18 06:47:22.584 -07 000000487 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:47:22.584 -07 000000581 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 227 ms to get response, and 235 ms overall 17-03-18 06:47:22.584 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 207 ms to get response, and 234 ms overall 17-03-18 06:47:22.584 -07 000000512 INF: Y Motor: Encoder = 129480 = motor step 101156.3 = 63.2227 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:22.584 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 197 ms to get response, and 216 ms overall 17-03-18 06:47:22.584 -07 000000447 INF: Z Motor: MoveAbsStepped took 236 ms (did NOT wait for settling yet)) 17-03-18 06:47:22.594 -07 000000512 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:22.594 -07 000000512 INF: Y Motor: Moving 1344 steps-21 17-03-18 06:47:22.594 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:22.974 -07 000000487 INF: FPGA: Recv YMVTILE 17-03-18 06:47:22.974 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 378 ms overall 17-03-18 06:47:23.024 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:23.024 -07 000000437 INF: FPGA: Recv YRDPOS 131186 17-03-18 06:47:23.034 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:47:23.034 -07 000000512 INF: Y Motor: Encoder = 131186 = motor step 102489.1 = 64.0557 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:23.034 -07 000000512 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm) 17-03-18 06:47:23.034 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.840 mm, average velocity = 2.223 mm/sec 17-03-18 06:47:23.984 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:23.984 -07 000000447 INF: FPGA: Recv YRDPOS 131186 17-03-18 06:47:23.994 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:23.994 -07 000000512 INF: Y Motor: Encoder = 131186 = motor step 102489.1 = 64.0557 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:24.024 -07 000000512 INF: Y Motor: After move to 64.062607, error = -0.006943, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:24.024 -07 000000512 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:47:24.024 -07 000000512 INF: Y Motor: Moved to 64.0557 after 1669 ms (table move) 17-03-18 06:47:24.024 -07 000000561 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137830 mm (DAC = 30109) 17-03-18 06:47:24.024 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:24.024 -07 000000437 INF: FPGA: Recv ZSGSRD 30750 17-03-18 06:47:24.034 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:47:24.034 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:24.034 -07 000000447 INF: FPGA: Recv ZSGSRD 30742 17-03-18 06:47:24.044 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:24.044 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:24.044 -07 000000512 INF: FPGA: Recv ZSGSRD 30747 17-03-18 06:47:24.054 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:24.054 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:24.054 -07 000000437 INF: FPGA: Recv ZSGSRD 30746 17-03-18 06:47:24.064 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:24.064 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:24.064 -07 000000512 INF: FPGA: Recv ZSGSRD 30748 17-03-18 06:47:24.074 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:24.074 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:24.074 -07 000000437 INF: FPGA: Recv ZSGSRD 30744 17-03-18 06:47:24.084 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:24.084 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:24.084 -07 000000437 INF: FPGA: Recv ZSGSRD 30741 17-03-18 06:47:24.094 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:24.094 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:24.094 -07 000000581 INF: FPGA: Recv ZSGSRD 30744 17-03-18 06:47:24.104 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:24.104 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:24.104 -07 000000512 INF: FPGA: Recv ZSGSRD 30740 17-03-18 06:47:24.114 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:24.114 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:24.114 -07 000000512 INF: FPGA: Recv ZSGSRD 30744 17-03-18 06:47:24.124 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:24.124 -07 000000561 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:24.124 -07 000000581 INF: FPGA: Recv ZPIEZORD 26528 17-03-18 06:47:24.134 -07 000000561 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:24.134 -07 000000561 INF: Z Motor: Piezo is near 36.7 V (nominally 0 to 100 V), expect near 45.9 V, since DAC is at 4.594 V. Piezo Error = -9.3 V. 17-03-18 06:47:24.134 -07 000000561 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.8 um, Read 10 ADC samples: Avg = 30745 (-137.0 uncal um), Error = 0.8 uncal um, Median = 30744 (-137.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30740 (-137.0 uncal um), Max = 30750 (-137.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:47:24.134 -07 000000561 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30745, posNoise = 5, negNoise = 5 17-03-18 06:47:24.134 -07 000000561 INF: Z Motor: After move to -0.137830, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:24.134 -07 000000561 INF: Z Motor: Settle wait time = 1672 ms, measure time = 106 ms (allowed 150 ms), total time = 1778 ms 17-03-18 06:47:24.134 -07 000000561 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:24.184 -07 000000561 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1831 ms 17-03-18 06:47:24.184 -07 000000561 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:24.184 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:24.184 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:24.184 -07 000000581 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:24.184 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:24.184 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:47:24.184 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:24.184 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:24.184 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:47:24.194 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:24.194 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:47:24.204 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms. 17-03-18 06:47:24.204 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms. 17-03-18 06:47:24.204 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:47:24.254 -07 000000581 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:47:24.554 -07 000000561 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:47:24.554 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:47:24.554 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:47:24.664 -07 000000487 INF: FPGA: Recv @CAMSNAP 382 17-03-18 06:47:24.664 -07 000000487 INF: FPGA: Recv CAMSNAP 17-03-18 06:47:24.664 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2352550048, 0x0, 559484976) start. 17-03-18 06:47:24.664 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 455 ms to get response, and 458 ms overall 17-03-18 06:47:24.784 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2352550048, 0x0, 559484976) end. Duration was 115 ms. 17-03-18 06:47:24.784 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:24.784 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 06:47:24.784 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 227 ms. 17-03-18 06:47:24.864 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:47:24.864 -07 000000581 INF: Autofocus start 17-03-18 06:47:24.864 -07 000000581 INF: MeasureProfile start 17-03-18 06:47:24.864 -07 000000447 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:47:24.874 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:47:24.874 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:47:24.884 -07 000000581 INF: MeasureProfile done 17-03-18 06:47:24.884 -07 000000581 INF: X=-48 Z correction [um]=-0.2370583 17-03-18 06:47:24.884 -07 000000581 INF: Autofocus finished 17-03-18 06:47:25.074 -07 000000581 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:47:25.074 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 06:47:25.074 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.0556640625, Z-position -0.137835754309576. ---------- 17-03-18 06:47:25.084 -07 000000610 INF: Cycle 153 Tile 6 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:25.084 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28570, sync = True, waitForSettling = True) 17-03-18 06:47:25.084 -07 000000610 INF: Z Motor: Moving to -0.130785 mm, started at -0.137836 mm, distance = 7.05 um 17-03-18 06:47:25.084 -07 000000610 INF: FPGA: Xmit ZDACW 28570\n [Z Motor] 17-03-18 06:47:25.084 -07 000000437 INF: FPGA: Recv ZDACW 17-03-18 06:47:25.094 -07 000000610 INF: FPGA: 'ZDACW 28570' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:47:25.094 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:25.094 -07 000000561 INF: FPGA: Recv ZDACR 28570 17-03-18 06:47:25.104 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:25.104 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:25.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:25.254 -07 000000561 INF: FPGA: Recv ZSGSRD 29654 17-03-18 06:47:25.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:25.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:25.264 -07 000000581 INF: FPGA: Recv ZSGSRD 29648 17-03-18 06:47:25.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:25.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:25.274 -07 000000561 INF: FPGA: Recv ZSGSRD 29647 17-03-18 06:47:25.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:25.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:25.284 -07 000000487 INF: FPGA: Recv ZSGSRD 29650 17-03-18 06:47:25.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:25.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:25.294 -07 000000561 INF: FPGA: Recv ZSGSRD 29646 17-03-18 06:47:25.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:25.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:25.304 -07 000000437 INF: FPGA: Recv ZSGSRD 29653 17-03-18 06:47:25.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:25.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:25.314 -07 000000447 INF: FPGA: Recv ZSGSRD 29645 17-03-18 06:47:25.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:25.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:25.324 -07 000000437 INF: FPGA: Recv ZSGSRD 29650 17-03-18 06:47:25.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:25.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:25.334 -07 000000561 INF: FPGA: Recv ZSGSRD 29649 17-03-18 06:47:25.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:25.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:25.344 -07 000000487 INF: FPGA: Recv ZSGSRD 29646 17-03-18 06:47:25.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:25.354 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:25.354 -07 000000447 INF: FPGA: Recv ZPIEZORD 25071 17-03-18 06:47:25.364 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:25.364 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.360 V. Piezo Error = -10.0 V. 17-03-18 06:47:25.364 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.8 um, Read 10 ADC samples: Avg = 29649 (-130.0 uncal um), Error = 0.8 uncal um, Median = 29648 (-130.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29645 (-130.0 uncal um), Max = 29654 (-130.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:47:25.364 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29649, posNoise = 5, negNoise = 4 17-03-18 06:47:25.364 -07 000000610 INF: Z Motor: After move to -0.130785, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:25.364 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms) 17-03-18 06:47:25.364 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:25.364 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:25.364 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:25.364 -07 000000581 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:25.364 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:25.364 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:25.364 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:25.364 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:25.364 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-18 06:47:25.364 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:25.364 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:25.364 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:25.374 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:47:25.374 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:25.374 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:25.374 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:25.384 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms. 17-03-18 06:47:25.384 -07 000000581 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms. 17-03-18 06:47:25.384 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-18 06:47:25.384 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms. 17-03-18 06:47:25.384 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28747 150\n [Camera] 17-03-18 06:47:25.464 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.019446, 17-03-18 06:47:25.584 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:26.054 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:26.054 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:26.054 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:26.054 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:26.054 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:26.054 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:26.064 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:26.064 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-18 06:47:26.064 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:26.064 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 06:47:26.244 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28747 851 17-03-18 06:47:26.394 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:26.454 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 391 ms. 17-03-18 06:47:26.454 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 06:47:26.454 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:26.454 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 389 ms. 17-03-18 06:47:26.454 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 06:47:26.454 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:26.454 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:26.454 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-18 06:47:26.454 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:26.464 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 405 ms. 17-03-18 06:47:26.624 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:26.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:26.624 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:26.624 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:26.624 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:26.624 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:26.634 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:26.634 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start. 17-03-18 06:47:26.634 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:26.634 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-18 06:47:26.814 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:47:26.814 -07 000000512 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:26.814 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28747 150' command took 2 ms to send, 1415 ms to get response, and 1427 ms overall 17-03-18 06:47:26.814 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.131434 17-03-18 06:47:26.814 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13143 mm 17-03-18 06:47:26.814 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:26.824 -07 000000487 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True) 17-03-18 06:47:26.824 -07 000000487 INF: Y Motor: Moving to 64.8926 mm, started at 64.0557 mm, delta = 0.8369 mm 17-03-18 06:47:26.824 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:26.824 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 28712, sync = True, waitForSettling = False) 17-03-18 06:47:26.824 -07 000000512 INF: Z Motor: Moving to -0.131435 mm, started at -0.130795 mm, distance = -0.64 um 17-03-18 06:47:26.824 -07 000000626 INF: FPGA: Recv YRDPOS 131187 17-03-18 06:47:26.834 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:47:26.834 -07 000000487 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:26.834 -07 000000512 INF: FPGA: Xmit ZDACW 28712\n [Z Motor] 17-03-18 06:47:26.834 -07 000000581 INF: FPGA: Recv ZDACW 17-03-18 06:47:26.834 -07 000000487 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:26.834 -07 000000487 INF: Y Motor: Moving 1338 steps-14 17-03-18 06:47:26.844 -07 000000512 INF: FPGA: 'ZDACW 28712' command took 0 ms to send, 0 ms to get response, and 17 ms overall 17-03-18 06:47:26.844 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:26.844 -07 000000447 INF: FPGA: Recv ZDACR 28712 17-03-18 06:47:26.854 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:26.854 -07 000000512 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet)) 17-03-18 06:47:26.854 -07 000000487 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:26.894 -07 000000581 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:26.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:27.024 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 391 ms. 17-03-18 06:47:27.024 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 06:47:27.024 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:27.024 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 396 ms. 17-03-18 06:47:27.024 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 06:47:27.024 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:27.024 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:27.034 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:27.034 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms. 17-03-18 06:47:27.034 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms. 17-03-18 06:47:27.224 -07 000000561 INF: FPGA: Recv YMVTILE 17-03-18 06:47:27.224 -07 000000487 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall 17-03-18 06:47:27.284 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:27.284 -07 000000512 INF: FPGA: Recv YRDPOS 132869 17-03-18 06:47:27.294 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:47:27.294 -07 000000487 INF: Y Motor: Encoder = 132869 = motor step 103803.9 = 64.8774 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:27.294 -07 000000487 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 06:47:27.294 -07 000000487 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.837 mm, average velocity = 2.124 mm/sec 17-03-18 06:47:28.244 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:28.244 -07 000000437 INF: FPGA: Recv YRDPOS 132869 17-03-18 06:47:28.254 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:28.254 -07 000000487 INF: Y Motor: Encoder = 132869 = motor step 103803.9 = 64.8774 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:28.284 -07 000000487 INF: Y Motor: After move to 64.892609, error = -0.015167, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:28.284 -07 000000487 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:47:28.284 -07 000000487 INF: Y Motor: Moved to 64.8774 after 1462 ms (table move) 17-03-18 06:47:28.284 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131435 mm (DAC = 28712) 17-03-18 06:47:28.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.294 -07 000000447 INF: FPGA: Recv ZSGSRD 29745 17-03-18 06:47:28.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 06:47:28.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.294 -07 000000581 INF: FPGA: Recv ZSGSRD 29739 17-03-18 06:47:28.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.304 -07 000000625 INF: FPGA: Recv ZSGSRD 29747 17-03-18 06:47:28.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.314 -07 000000561 INF: FPGA: Recv ZSGSRD 29751 17-03-18 06:47:28.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.324 -07 000000437 INF: FPGA: Recv ZSGSRD 29746 17-03-18 06:47:28.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.334 -07 000000437 INF: FPGA: Recv ZSGSRD 29745 17-03-18 06:47:28.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.344 -07 000000487 INF: FPGA: Recv ZSGSRD 29750 17-03-18 06:47:28.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.354 -07 000000512 INF: FPGA: Recv ZSGSRD 29747 17-03-18 06:47:28.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.364 -07 000000487 INF: FPGA: Recv ZSGSRD 29750 17-03-18 06:47:28.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.374 -07 000000437 INF: FPGA: Recv ZSGSRD 29754 17-03-18 06:47:28.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.384 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:28.384 -07 000000625 INF: FPGA: Recv ZPIEZORD 25239 17-03-18 06:47:28.394 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.394 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.381 V. Piezo Error = -9.9 V. 17-03-18 06:47:28.394 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29747 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29747 (-130.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29739 (-130.6 uncal um), Max = 29754 (-130.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 06:47:28.394 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29747, posNoise = 7, negNoise = 8 17-03-18 06:47:28.394 -07 000000610 INF: Z Motor: After move to -0.131435, error = 0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:28.394 -07 000000610 INF: Z Motor: Settle wait time = 1464 ms, measure time = 103 ms (allowed 150 ms), total time = 1567 ms 17-03-18 06:47:28.394 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:28.444 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1622 ms 17-03-18 06:47:28.444 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:28.444 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87744140625, Z-position -0.131424390592098. ---------- 17-03-18 06:47:28.444 -07 000000610 INF: Cycle 153 Tile 7 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:28.444 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28535, sync = True, waitForSettling = True) 17-03-18 06:47:28.444 -07 000000610 INF: Z Motor: Moving to -0.130625 mm, started at -0.131424 mm, distance = 0.80 um 17-03-18 06:47:28.444 -07 000000610 INF: FPGA: Xmit ZDACW 28535\n [Z Motor] 17-03-18 06:47:28.444 -07 000000625 INF: FPGA: Recv ZDACW 17-03-18 06:47:28.454 -07 000000610 INF: FPGA: 'ZDACW 28535' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:47:28.454 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:28.454 -07 000000581 INF: FPGA: Recv ZDACR 28535 17-03-18 06:47:28.464 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.464 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:28.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.614 -07 000000512 INF: FPGA: Recv ZSGSRD 29620 17-03-18 06:47:28.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:28.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.624 -07 000000487 INF: FPGA: Recv ZSGSRD 29622 17-03-18 06:47:28.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.634 -07 000000512 INF: FPGA: Recv ZSGSRD 29622 17-03-18 06:47:28.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.644 -07 000000561 INF: FPGA: Recv ZSGSRD 29624 17-03-18 06:47:28.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.654 -07 000000437 INF: FPGA: Recv ZSGSRD 29621 17-03-18 06:47:28.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.664 -07 000000561 INF: FPGA: Recv ZSGSRD 29620 17-03-18 06:47:28.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.674 -07 000000512 INF: FPGA: Recv ZSGSRD 29628 17-03-18 06:47:28.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.684 -07 000000487 INF: FPGA: Recv ZSGSRD 29624 17-03-18 06:47:28.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.694 -07 000000512 INF: FPGA: Recv ZSGSRD 29617 17-03-18 06:47:28.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:28.704 -07 000000437 INF: FPGA: Recv ZSGSRD 29625 17-03-18 06:47:28.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.714 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:28.714 -07 000000561 INF: FPGA: Recv ZPIEZORD 25055 17-03-18 06:47:28.724 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:28.724 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.354 V. Piezo Error = -10.0 V. 17-03-18 06:47:28.724 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29622 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29622 (-129.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29617 (-129.8 uncal um), Max = 29628 (-129.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:47:28.724 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29622, posNoise = 6, negNoise = 5 17-03-18 06:47:28.724 -07 000000610 INF: Z Motor: After move to -0.130625, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:28.724 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 06:47:28.724 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:28.724 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:28.724 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:28.724 -07 000000581 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:28.724 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:28.724 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:28.724 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:28.724 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:28.724 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:28.724 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:28.724 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:28.724 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:28.734 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:47:28.734 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:28.734 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 06:47:28.734 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:28.744 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 06:47:28.744 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 06:47:28.744 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 06:47:28.744 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 06:47:28.744 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28712 150\n [Camera] 17-03-18 06:47:28.944 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:29.404 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:29.404 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:29.414 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:29.414 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:29.414 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:29.414 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:29.414 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2468220576, 0x0, 391868352) start. 17-03-18 06:47:29.414 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:29.424 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:29.424 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 06:47:29.604 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28712 851 17-03-18 06:47:29.754 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:29.794 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2468220576, 0x0, 391868352) end. Duration was 383 ms. 17-03-18 06:47:29.794 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 06:47:29.794 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:29.804 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:29.804 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 06:47:29.804 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 381 ms. 17-03-18 06:47:29.804 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms. 17-03-18 06:47:29.804 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:29.804 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:29.814 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms. 17-03-18 06:47:29.974 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:29.974 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:29.974 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:29.974 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:29.974 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:29.974 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:30.094 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:30.094 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start. 17-03-18 06:47:30.094 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:30.094 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-18 06:47:30.164 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:47:30.164 -07 000000590 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:30.164 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28712 150' command took 2 ms to send, 1417 ms to get response, and 1424 ms overall 17-03-18 06:47:30.164 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.131322 17-03-18 06:47:30.174 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13132 mm 17-03-18 06:47:30.174 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:30.174 -07 000000487 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True) 17-03-18 06:47:30.174 -07 000000487 INF: Y Motor: Moving to 65.7226 mm, started at 64.8774 mm, delta = 0.8452 mm 17-03-18 06:47:30.174 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:30.174 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 28687, sync = True, waitForSettling = False) 17-03-18 06:47:30.174 -07 000000512 INF: Z Motor: Moving to -0.131321 mm, started at -0.130621 mm, distance = -0.70 um 17-03-18 06:47:30.174 -07 000000437 INF: FPGA: Recv YRDPOS 132869 17-03-18 06:47:30.184 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:47:30.184 -07 000000512 INF: FPGA: Xmit ZDACW 28687\n [Z Motor] 17-03-18 06:47:30.184 -07 000000487 INF: Y Motor: Encoder = 132869 = motor step 103803.9 = 64.8774 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:30.184 -07 000000487 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:30.184 -07 000000487 INF: Y Motor: Moving 1352 steps-31 17-03-18 06:47:30.184 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 06:47:30.194 -07 000000512 INF: FPGA: 'ZDACW 28687' command took 0 ms to send, 0 ms to get response, and 16 ms overall 17-03-18 06:47:30.194 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:30.194 -07 000000581 INF: FPGA: Recv ZDACR 28687 17-03-18 06:47:30.204 -07 000000487 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:30.204 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:30.204 -07 000000512 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet)) 17-03-18 06:47:30.484 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 383 ms. 17-03-18 06:47:30.484 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-18 06:47:30.484 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:30.484 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 389 ms. 17-03-18 06:47:30.484 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 06:47:30.484 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:30.484 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:30.484 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:30.484 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 512 ms. 17-03-18 06:47:30.494 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 514 ms. 17-03-18 06:47:30.574 -07 000000561 INF: FPGA: Recv YMVTILE 17-03-18 06:47:30.574 -07 000000487 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 06:47:30.624 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:30.634 -07 000000512 INF: FPGA: Recv YRDPOS 134580 17-03-18 06:47:30.634 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-18 06:47:30.634 -07 000000487 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:30.634 -07 000000487 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm) 17-03-18 06:47:30.634 -07 000000487 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.845 mm, average velocity = 2.124 mm/sec 17-03-18 06:47:30.834 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.018051, 17-03-18 06:47:31.584 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:31.584 -07 000000581 INF: FPGA: Recv YRDPOS 134580 17-03-18 06:47:31.594 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:31.594 -07 000000487 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:31.634 -07 000000487 INF: Y Motor: After move to 65.722610, error = -0.009720, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:31.634 -07 000000487 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:47:31.634 -07 000000487 INF: Y Motor: Moved to 65.7129 after 1457 ms (table move) 17-03-18 06:47:31.634 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131321 mm (DAC = 28687) 17-03-18 06:47:31.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.634 -07 000000487 INF: FPGA: Recv ZSGSRD 29728 17-03-18 06:47:31.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:47:31.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.644 -07 000000437 INF: FPGA: Recv ZSGSRD 29731 17-03-18 06:47:31.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.654 -07 000000487 INF: FPGA: Recv ZSGSRD 29728 17-03-18 06:47:31.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.664 -07 000000512 INF: FPGA: Recv ZSGSRD 29730 17-03-18 06:47:31.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.674 -07 000000487 INF: FPGA: Recv ZSGSRD 29728 17-03-18 06:47:31.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.684 -07 000000480 INF: FPGA: Recv ZSGSRD 29732 17-03-18 06:47:31.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.694 -07 000000512 INF: FPGA: Recv ZSGSRD 29736 17-03-18 06:47:31.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.704 -07 000000512 INF: FPGA: Recv ZSGSRD 29738 17-03-18 06:47:31.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.714 -07 000000581 INF: FPGA: Recv ZSGSRD 29728 17-03-18 06:47:31.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.724 -07 000000561 INF: FPGA: Recv ZSGSRD 29734 17-03-18 06:47:31.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.734 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:31.734 -07 000000480 INF: FPGA: Recv ZPIEZORD 25228 17-03-18 06:47:31.744 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.744 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.377 V. Piezo Error = -9.9 V. 17-03-18 06:47:31.744 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29731 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29730 (-130.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29728 (-130.5 uncal um), Max = 29738 (-130.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 06:47:31.744 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29731, posNoise = 7, negNoise = 3 17-03-18 06:47:31.744 -07 000000610 INF: Z Motor: After move to -0.131321, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:31.744 -07 000000610 INF: Z Motor: Settle wait time = 1459 ms, measure time = 107 ms (allowed 150 ms), total time = 1566 ms 17-03-18 06:47:31.744 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:31.794 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1619 ms 17-03-18 06:47:31.794 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:31.794 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.712890625, Z-position -0.13132160319783. ---------- 17-03-18 06:47:31.794 -07 000000610 INF: Cycle 153 Tile 8 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:31.794 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28510, sync = True, waitForSettling = True) 17-03-18 06:47:31.794 -07 000000610 INF: Z Motor: Moving to -0.130510 mm, started at -0.131322 mm, distance = 0.81 um 17-03-18 06:47:31.794 -07 000000610 INF: FPGA: Xmit ZDACW 28510\n [Z Motor] 17-03-18 06:47:31.794 -07 000000581 INF: FPGA: Recv ZDACW 17-03-18 06:47:31.804 -07 000000610 INF: FPGA: 'ZDACW 28510' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:47:31.804 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:31.804 -07 000000480 INF: FPGA: Recv ZDACR 28510 17-03-18 06:47:31.814 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.814 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:31.894 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:31.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:31.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.964 -07 000000581 INF: FPGA: Recv ZSGSRD 29614 17-03-18 06:47:31.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.974 -07 000000480 INF: FPGA: Recv ZSGSRD 29604 17-03-18 06:47:31.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.984 -07 000000487 INF: FPGA: Recv ZSGSRD 29605 17-03-18 06:47:31.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:31.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:31.994 -07 000000480 INF: FPGA: Recv ZSGSRD 29606 17-03-18 06:47:32.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:32.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:32.004 -07 000000625 INF: FPGA: Recv ZSGSRD 29606 17-03-18 06:47:32.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:32.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:32.014 -07 000000512 INF: FPGA: Recv ZSGSRD 29611 17-03-18 06:47:32.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:32.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:32.024 -07 000000590 INF: FPGA: Recv ZSGSRD 29606 17-03-18 06:47:32.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:32.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:32.034 -07 000000437 INF: FPGA: Recv ZSGSRD 29608 17-03-18 06:47:32.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:32.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:32.044 -07 000000461 INF: FPGA: Recv ZSGSRD 29608 17-03-18 06:47:32.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:32.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:32.054 -07 000000581 INF: FPGA: Recv ZSGSRD 29601 17-03-18 06:47:32.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:32.064 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:32.064 -07 000000461 INF: FPGA: Recv ZPIEZORD 25049 17-03-18 06:47:32.074 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:32.074 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.350 V. Piezo Error = -10.0 V. 17-03-18 06:47:32.074 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29607 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29606 (-129.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29601 (-129.7 uncal um), Max = 29614 (-129.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:47:32.074 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29607, posNoise = 7, negNoise = 6 17-03-18 06:47:32.074 -07 000000610 INF: Z Motor: After move to -0.130510, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:32.074 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 06:47:32.074 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:32.074 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:32.074 -07 000000581 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:32.074 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:32.074 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:32.074 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:32.074 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:32.074 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:32.074 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:32.074 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:32.074 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:32.074 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:32.084 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:47:32.084 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:32.084 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:32.084 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:32.094 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 06:47:32.094 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 06:47:32.094 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 06:47:32.094 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:47:32.104 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28687 150\n [Camera] 17-03-18 06:47:32.304 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:32.764 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:32.764 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:32.764 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:32.764 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:32.764 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:32.774 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:32.774 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:32.774 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-18 06:47:32.774 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:32.774 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 06:47:32.954 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28687 851 17-03-18 06:47:33.104 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:33.144 -07 000000625 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 06:47:33.144 -07 000000625 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 06:47:33.144 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:33.144 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 370 ms. 17-03-18 06:47:33.144 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 06:47:33.144 -07 000000461 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:33.154 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:47:33.154 -07 000000625 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 06:47:33.154 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-18 06:47:33.164 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 06:47:33.334 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:33.334 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:33.334 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:33.334 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:33.334 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:33.334 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:33.334 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:33.334 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start. 17-03-18 06:47:33.344 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:33.344 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start. 17-03-18 06:47:33.524 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:47:33.524 -07 000000625 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:33.524 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28687 150' command took 2 ms to send, 1415 ms to get response, and 1425 ms overall 17-03-18 06:47:33.524 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.130831 17-03-18 06:47:33.524 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13083 mm 17-03-18 06:47:33.524 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:33.524 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True) 17-03-18 06:47:33.524 -07 000000461 INF: Y Motor: Moving to 66.5526 mm, started at 65.7129 mm, delta = 0.8397 mm 17-03-18 06:47:33.524 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:33.534 -07 000000625 INF: Z Motor: Entering MoveAbsStepped (DAC = 28580, sync = True, waitForSettling = False) 17-03-18 06:47:33.534 -07 000000625 INF: Z Motor: Moving to -0.130831 mm, started at -0.130525 mm, distance = -0.31 um 17-03-18 06:47:33.534 -07 000000625 INF: FPGA: Xmit ZDACW 28580\n [Z Motor] 17-03-18 06:47:33.534 -07 000000480 INF: FPGA: Recv YRDPOS 134580 17-03-18 06:47:33.534 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 06:47:33.534 -07 000000461 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:33.534 -07 000000461 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:33.534 -07 000000461 INF: Y Motor: Moving 1344 steps-20 17-03-18 06:47:33.534 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 06:47:33.544 -07 000000625 INF: FPGA: 'ZDACW 28580' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:33.544 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:33.554 -07 000000625 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:33.554 -07 000000480 INF: FPGA: Recv ZDACR 28580 17-03-18 06:47:33.564 -07 000000625 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:47:33.564 -07 000000625 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet)) 17-03-18 06:47:33.714 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 06:47:33.714 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 06:47:33.714 -07 000000590 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:33.714 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:33.714 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 06:47:33.714 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 06:47:33.714 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:33.724 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:33.724 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-18 06:47:33.724 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-18 06:47:33.914 -07 000000625 INF: FPGA: Recv YMVTILE 17-03-18 06:47:33.914 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall 17-03-18 06:47:33.974 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:33.974 -07 000000480 INF: FPGA: Recv YRDPOS 136269 17-03-18 06:47:33.984 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:47:33.984 -07 000000461 INF: Y Motor: Encoder = 136269 = motor step 106460.2 = 66.5376 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:33.984 -07 000000461 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 06:47:33.984 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.840 mm, average velocity = 2.181 mm/sec 17-03-18 06:47:34.934 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:34.934 -07 000000480 INF: FPGA: Recv YRDPOS 136269 17-03-18 06:47:34.944 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:34.944 -07 000000461 INF: Y Motor: Encoder = 136269 = motor step 106460.2 = 66.5376 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:34.974 -07 000000461 INF: Y Motor: After move to 66.552605, error = -0.015007, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:34.974 -07 000000461 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:47:34.974 -07 000000461 INF: Y Motor: Moved to 66.5376 after 1445 ms (table move) 17-03-18 06:47:34.974 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130831 mm (DAC = 28580) 17-03-18 06:47:34.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:34.984 -07 000000487 INF: FPGA: Recv ZSGSRD 29658 17-03-18 06:47:34.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:47:34.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:34.984 -07 000000462 INF: FPGA: Recv ZSGSRD 29655 17-03-18 06:47:34.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:47:34.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:34.994 -07 000000474 INF: FPGA: Recv ZSGSRD 29660 17-03-18 06:47:35.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.004 -07 000000590 INF: FPGA: Recv ZSGSRD 29655 17-03-18 06:47:35.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.014 -07 000000625 INF: FPGA: Recv ZSGSRD 29657 17-03-18 06:47:35.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.024 -07 000000462 INF: FPGA: Recv ZSGSRD 29653 17-03-18 06:47:35.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.034 -07 000000625 INF: FPGA: Recv ZSGSRD 29654 17-03-18 06:47:35.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.044 -07 000000461 INF: FPGA: Recv ZSGSRD 29657 17-03-18 06:47:35.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.054 -07 000000487 INF: FPGA: Recv ZSGSRD 29656 17-03-18 06:47:35.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.064 -07 000000462 INF: FPGA: Recv ZSGSRD 29656 17-03-18 06:47:35.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.074 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:35.074 -07 000000625 INF: FPGA: Recv ZPIEZORD 25160 17-03-18 06:47:35.084 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.084 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.361 V. Piezo Error = -9.9 V. 17-03-18 06:47:35.084 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.8 um, Read 10 ADC samples: Avg = 29656 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29656 (-130.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29653 (-130.0 uncal um), Max = 29660 (-130.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 06:47:35.084 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29656, posNoise = 4, negNoise = 3 17-03-18 06:47:35.084 -07 000000610 INF: Z Motor: After move to -0.130831, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:35.084 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 104 ms (allowed 150 ms), total time = 1550 ms 17-03-18 06:47:35.084 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:35.134 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms 17-03-18 06:47:35.134 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:35.134 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53759765625, Z-position -0.130839787287198. ---------- 17-03-18 06:47:35.134 -07 000000610 INF: Cycle 153 Tile 9 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:35.134 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28403, sync = True, waitForSettling = True) 17-03-18 06:47:35.134 -07 000000610 INF: Z Motor: Moving to -0.130021 mm, started at -0.130840 mm, distance = 0.82 um 17-03-18 06:47:35.134 -07 000000610 INF: FPGA: Xmit ZDACW 28403\n [Z Motor] 17-03-18 06:47:35.134 -07 000000487 INF: FPGA: Recv ZDACW 17-03-18 06:47:35.144 -07 000000610 INF: FPGA: 'ZDACW 28403' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:47:35.144 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:35.144 -07 000000461 INF: FPGA: Recv ZDACR 28403 17-03-18 06:47:35.154 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.154 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:35.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.304 -07 000000591 INF: FPGA: Recv ZSGSRD 29533 17-03-18 06:47:35.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:35.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.314 -07 000000480 INF: FPGA: Recv ZSGSRD 29527 17-03-18 06:47:35.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.324 -07 000000474 INF: FPGA: Recv ZSGSRD 29521 17-03-18 06:47:35.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.334 -07 000000462 INF: FPGA: Recv ZSGSRD 29532 17-03-18 06:47:35.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.344 -07 000000625 INF: FPGA: Recv ZSGSRD 29529 17-03-18 06:47:35.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.354 -07 000000487 INF: FPGA: Recv ZSGSRD 29535 17-03-18 06:47:35.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.364 -07 000000625 INF: FPGA: Recv ZSGSRD 29531 17-03-18 06:47:35.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.374 -07 000000590 INF: FPGA: Recv ZSGSRD 29526 17-03-18 06:47:35.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.384 -07 000000474 INF: FPGA: Recv ZSGSRD 29533 17-03-18 06:47:35.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:35.394 -07 000000487 INF: FPGA: Recv ZSGSRD 29530 17-03-18 06:47:35.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.404 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:35.404 -07 000000625 INF: FPGA: Recv ZPIEZORD 24999 17-03-18 06:47:35.414 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:35.414 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.334 V. Piezo Error = -9.9 V. 17-03-18 06:47:35.414 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.0 um, Read 10 ADC samples: Avg = 29530 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29530 (-129.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29521 (-129.2 uncal um), Max = 29535 (-129.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 06:47:35.414 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29530, posNoise = 5, negNoise = 9 17-03-18 06:47:35.414 -07 000000610 INF: Z Motor: After move to -0.130021, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:35.414 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 06:47:35.414 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:35.414 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:35.414 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:35.414 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:35.414 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:35.414 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:35.414 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:35.414 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:35.414 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:35.414 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:35.414 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:35.414 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:35.424 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:47:35.424 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:35.424 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:35.424 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:35.434 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 06:47:35.434 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:47:35.434 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 06:47:35.434 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:47:35.444 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28580 150\n [Camera] 17-03-18 06:47:35.644 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:36.104 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:36.104 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:36.104 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:36.104 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:36.114 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:36.114 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:36.234 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:36.234 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-18 06:47:36.234 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:36.234 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-18 06:47:36.254 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.001704, 17-03-18 06:47:36.294 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28580 851 17-03-18 06:47:36.444 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:36.604 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 06:47:36.604 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 06:47:36.604 -07 000000461 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:36.604 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 371 ms. 17-03-18 06:47:36.604 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 06:47:36.604 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:36.604 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:36.604 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 500 ms. 17-03-18 06:47:36.614 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:36.614 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 507 ms. 17-03-18 06:47:36.674 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:36.674 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:36.674 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:36.674 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:36.674 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:36.684 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:36.684 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:36.684 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-18 06:47:36.694 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:36.694 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 06:47:36.864 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:47:36.864 -07 000000461 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:36.864 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28580 150' command took 2 ms to send, 1415 ms to get response, and 1424 ms overall 17-03-18 06:47:36.864 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 06:47:36.864 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 10 at Y-position 66.53759765625, Z-Position -0.130030336557336. ------ 17-03-18 06:47:36.874 -07 000000487 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13685 mm 17-03-18 06:47:36.874 -07 000000487 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:36.874 -07 000000625 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:47:36.874 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True) 17-03-18 06:47:36.874 -07 000000474 INF: Z Motor: Entering MoveAbsStepped (DAC = 29894, sync = True, waitForSettling = False) 17-03-18 06:47:36.874 -07 000000474 INF: Z Motor: Moving to -0.136846 mm, started at -0.130030 mm, distance = -6.82 um 17-03-18 06:47:36.874 -07 000000590 INF: Y Motor: Moving to 67.3826 mm, started at 66.5376 mm, delta = 0.8450 mm 17-03-18 06:47:36.874 -07 000000461 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:47:36.884 -07 000000625 INF: FPGA: 'FOCMRRCUR 80' command took 1 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:47:36.884 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:36.884 -07 000000626 INF: FPGA: Recv YRDPOS 136269 17-03-18 06:47:36.894 -07 000000474 INF: FPGA: Xmit ZDACW 29894\n [Z Motor] 17-03-18 06:47:36.894 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-18 06:47:36.894 -07 000000590 INF: Y Motor: Encoder = 136269 = motor step 106460.2 = 66.5376 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:36.894 -07 000000590 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:36.894 -07 000000590 INF: Y Motor: Moving 1352 steps-31 17-03-18 06:47:36.894 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:36.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:36.894 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 06:47:36.904 -07 000000625 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:47:36.904 -07 000000474 INF: FPGA: 'ZDACW 29894' command took 0 ms to send, 0 ms to get response, and 22 ms overall 17-03-18 06:47:36.914 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:36.924 -07 000000474 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:36.924 -07 000000480 INF: FPGA: Recv ZDACR 29894 17-03-18 06:47:36.934 -07 000000474 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 28 ms overall 17-03-18 06:47:36.934 -07 000000474 INF: Z Motor: MoveAbsStepped took 53 ms (did NOT wait for settling yet)) 17-03-18 06:47:37.074 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 385 ms. 17-03-18 06:47:37.074 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 06:47:37.074 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:37.074 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:37.074 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-18 06:47:37.074 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 06:47:37.074 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 06:47:37.074 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:37.074 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:37.084 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms. 17-03-18 06:47:37.104 -07 000000474 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:47:37.104 -07 000000625 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall 17-03-18 06:47:37.294 -07 000000461 INF: FPGA: Recv YMVTILE 17-03-18 06:47:37.294 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 399 ms overall 17-03-18 06:47:37.344 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:37.344 -07 000000474 INF: FPGA: Recv YRDPOS 137975 17-03-18 06:47:37.354 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:47:37.354 -07 000000590 INF: Y Motor: Encoder = 137975 = motor step 107793.0 = 67.3706 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:37.354 -07 000000590 INF: Y Motor: Position error before settling (table move) = -25 encoder counts (-0.012 mm) 17-03-18 06:47:37.354 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.845 mm, average velocity = 2.118 mm/sec 17-03-18 06:47:38.304 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:38.304 -07 000000461 INF: FPGA: Recv YRDPOS 137975 17-03-18 06:47:38.314 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:38.314 -07 000000590 INF: Y Motor: Encoder = 137975 = motor step 107793.0 = 67.3706 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:38.344 -07 000000590 INF: Y Motor: After move to 67.382607, error = -0.012001, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:38.344 -07 000000590 INF: Y Motor: Position error after settling (table move) = -25 encoder counts (-0.012 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:47:38.344 -07 000000590 INF: Y Motor: Moved to 67.3706 after 1466 ms (table move) 17-03-18 06:47:38.344 -07 000000487 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136846 mm (DAC = 29894) 17-03-18 06:47:38.344 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:38.344 -07 000000590 INF: FPGA: Recv ZSGSRD 30594 17-03-18 06:47:38.354 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 06:47:38.354 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:38.354 -07 000000461 INF: FPGA: Recv ZSGSRD 30593 17-03-18 06:47:38.364 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:38.364 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:38.364 -07 000000461 INF: FPGA: Recv ZSGSRD 30589 17-03-18 06:47:38.374 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:38.374 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:38.374 -07 000000462 INF: FPGA: Recv ZSGSRD 30591 17-03-18 06:47:38.384 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:38.384 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:38.384 -07 000000480 INF: FPGA: Recv ZSGSRD 30605 17-03-18 06:47:38.394 -07 000000487 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:38.394 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:38.394 -07 000000461 INF: FPGA: Recv ZSGSRD 30600 17-03-18 06:47:38.404 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:38.404 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:38.404 -07 000000461 INF: FPGA: Recv ZSGSRD 30594 17-03-18 06:47:38.414 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:38.414 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:38.414 -07 000000461 INF: FPGA: Recv ZSGSRD 30591 17-03-18 06:47:38.424 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:38.424 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:38.424 -07 000000461 INF: FPGA: Recv ZSGSRD 30589 17-03-18 06:47:38.434 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:38.434 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:38.434 -07 000000461 INF: FPGA: Recv ZSGSRD 30586 17-03-18 06:47:38.444 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:38.444 -07 000000487 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:38.444 -07 000000461 INF: FPGA: Recv ZPIEZORD 26385 17-03-18 06:47:38.454 -07 000000487 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:38.454 -07 000000487 INF: Z Motor: Piezo is near 36.4 V (nominally 0 to 100 V), expect near 45.6 V, since DAC is at 4.562 V. Piezo Error = -9.3 V. 17-03-18 06:47:38.454 -07 000000487 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.8 um, Read 10 ADC samples: Avg = 30593 (-136.1 uncal um), Error = 0.8 uncal um, Median = 30592 (-136.1 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 30586 (-136.0 uncal um), Max = 30605 (-136.1 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 06:47:38.454 -07 000000487 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30593, posNoise = 12, negNoise = 7 17-03-18 06:47:38.454 -07 000000487 INF: Z Motor: After move to -0.136846, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:38.454 -07 000000487 INF: Z Motor: Settle wait time = 1469 ms, measure time = 104 ms (allowed 150 ms), total time = 1573 ms 17-03-18 06:47:38.454 -07 000000487 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:38.504 -07 000000487 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1626 ms 17-03-18 06:47:38.504 -07 000000487 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:38.504 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:38.504 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:38.504 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:38.504 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:38.504 -07 000000447 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:47:38.504 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:38.504 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:38.504 -07 000000447 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:47:38.514 -07 000000447 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:38.514 -07 000000447 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:47:38.524 -07 000000447 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms. 17-03-18 06:47:38.524 -07 000000447 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 19 ms. 17-03-18 06:47:38.524 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:47:38.574 -07 000000590 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:47:38.874 -07 000000590 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:47:38.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:47:38.874 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:47:38.874 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2317127784, 0x0, 559484976) start. 17-03-18 06:47:38.914 -07 000000626 INF: FPGA: Recv @CAMSNAP 383 17-03-18 06:47:38.914 -07 000000590 INF: FPGA: Recv CAMSNAP 17-03-18 06:47:38.914 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 386 ms to get response, and 388 ms overall 17-03-18 06:47:39.004 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2317127784, 0x0, 559484976) end. Duration was 126 ms. 17-03-18 06:47:39.004 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:39.004 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 06:47:39.004 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 06:47:39.014 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:47:39.014 -07 000000447 INF: Autofocus start 17-03-18 06:47:39.014 -07 000000447 INF: MeasureProfile start 17-03-18 06:47:39.014 -07 000000591 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:47:39.024 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:47:39.024 -07 000000455 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:47:39.024 -07 000000447 INF: MeasureProfile done 17-03-18 06:47:39.024 -07 000000447 INF: X=16 Z correction [um]=0.0530179 17-03-18 06:47:39.024 -07 000000447 INF: Autofocus finished 17-03-18 06:47:39.224 -07 000000590 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:47:39.224 -07 000000455 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 06:47:39.224 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37060546875, Z-position -0.136859274064028. ---------- 17-03-18 06:47:39.224 -07 000000610 INF: Cycle 153 Tile 10 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:39.234 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28418, sync = True, waitForSettling = True) 17-03-18 06:47:39.234 -07 000000610 INF: Z Motor: Moving to -0.130089 mm, started at -0.136859 mm, distance = 6.77 um 17-03-18 06:47:39.234 -07 000000610 INF: FPGA: Xmit ZDACW 28418\n [Z Motor] 17-03-18 06:47:39.234 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 06:47:39.244 -07 000000610 INF: FPGA: 'ZDACW 28418' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.244 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:39.244 -07 000000474 INF: FPGA: Recv ZDACR 28418 17-03-18 06:47:39.254 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.254 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:39.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:39.404 -07 000000474 INF: FPGA: Recv ZSGSRD 29545 17-03-18 06:47:39.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:39.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:39.414 -07 000000462 INF: FPGA: Recv ZSGSRD 29535 17-03-18 06:47:39.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:39.424 -07 000000626 INF: FPGA: Recv ZSGSRD 29538 17-03-18 06:47:39.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:39.434 -07 000000590 INF: FPGA: Recv ZSGSRD 29541 17-03-18 06:47:39.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:39.444 -07 000000626 INF: FPGA: Recv ZSGSRD 29542 17-03-18 06:47:39.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:39.454 -07 000000462 INF: FPGA: Recv ZSGSRD 29538 17-03-18 06:47:39.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:39.464 -07 000000447 INF: FPGA: Recv ZSGSRD 29544 17-03-18 06:47:39.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:39.474 -07 000000590 INF: FPGA: Recv ZSGSRD 29534 17-03-18 06:47:39.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:39.484 -07 000000447 INF: FPGA: Recv ZSGSRD 29543 17-03-18 06:47:39.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:39.494 -07 000000590 INF: FPGA: Recv ZSGSRD 29541 17-03-18 06:47:39.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.504 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:39.504 -07 000000447 INF: FPGA: Recv ZPIEZORD 25018 17-03-18 06:47:39.514 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:39.514 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.336 V. Piezo Error = -9.9 V. 17-03-18 06:47:39.514 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.1 um, Read 10 ADC samples: Avg = 29540 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29541 (-129.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29534 (-129.3 uncal um), Max = 29545 (-129.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:47:39.514 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29540, posNoise = 5, negNoise = 6 17-03-18 06:47:39.514 -07 000000610 INF: Z Motor: After move to -0.130089, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:39.514 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms) 17-03-18 06:47:39.514 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:39.514 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:39.514 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:39.514 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:39.514 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:39.514 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:39.514 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:39.514 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:39.514 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:39.514 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:39.514 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:39.514 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:39.524 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:47:39.524 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:39.524 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:39.524 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:39.524 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 06:47:39.524 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 06:47:39.534 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 06:47:39.534 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 06:47:39.534 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28595 150\n [Camera] 17-03-18 06:47:39.734 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:40.204 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 661 17-03-18 06:47:40.204 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 661 17-03-18 06:47:40.204 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:40.204 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 661 17-03-18 06:47:40.204 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 661 17-03-18 06:47:40.204 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:40.204 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:40.204 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2336209168, 0x0, 391868352) start. 17-03-18 06:47:40.214 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:40.214 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2468220576, 0x0, 418435064) start. 17-03-18 06:47:40.394 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28595 851 17-03-18 06:47:40.544 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:40.584 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2468220576, 0x0, 418435064) end. Duration was 374 ms. 17-03-18 06:47:40.584 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms. 17-03-18 06:47:40.584 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:40.584 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2336209168, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 06:47:40.584 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 06:47:40.584 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:40.584 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:40.594 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:40.594 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 06:47:40.594 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 06:47:40.764 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:40.764 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:40.764 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:40.874 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:40.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:40.884 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:40.884 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 06:47:40.884 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:40.884 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:40.884 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:47:40.954 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:47:40.954 -07 000000474 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:40.954 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28595 150' command took 2 ms to send, 1417 ms to get response, and 1424 ms overall 17-03-18 06:47:40.954 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.130431 17-03-18 06:47:40.954 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13043 mm 17-03-18 06:47:40.954 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:40.964 -07 000000625 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True) 17-03-18 06:47:40.964 -07 000000625 INF: Y Motor: Moving to 68.2126 mm, started at 67.3706 mm, delta = 0.8420 mm 17-03-18 06:47:40.964 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:40.964 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 28493, sync = True, waitForSettling = False) 17-03-18 06:47:40.964 -07 000000447 INF: Z Motor: Moving to -0.130433 mm, started at -0.130095 mm, distance = -0.34 um 17-03-18 06:47:40.964 -07 000000462 INF: FPGA: Recv YRDPOS 137975 17-03-18 06:47:40.974 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:47:40.974 -07 000000625 INF: Y Motor: Encoder = 137975 = motor step 107793.0 = 67.3706 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:40.974 -07 000000625 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:40.974 -07 000000625 INF: Y Motor: Moving 1347 steps-25 17-03-18 06:47:40.974 -07 000000447 INF: FPGA: Xmit ZDACW 28493\n [Z Motor] 17-03-18 06:47:40.974 -07 000000591 INF: FPGA: Recv ZDACW 17-03-18 06:47:40.984 -07 000000447 INF: FPGA: 'ZDACW 28493' command took 0 ms to send, 0 ms to get response, and 16 ms overall 17-03-18 06:47:40.984 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:40.984 -07 000000462 INF: FPGA: Recv ZDACR 28493 17-03-18 06:47:40.994 -07 000000625 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:40.994 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:40.994 -07 000000447 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet)) 17-03-18 06:47:41.264 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 379 ms. 17-03-18 06:47:41.264 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-18 06:47:41.264 -07 000000590 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:41.264 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 386 ms. 17-03-18 06:47:41.264 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 06:47:41.264 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:41.264 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:41.274 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:41.274 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 505 ms. 17-03-18 06:47:41.274 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-18 06:47:41.364 -07 000000462 INF: FPGA: Recv YMVTILE 17-03-18 06:47:41.364 -07 000000625 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 06:47:41.424 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:41.424 -07 000000462 INF: FPGA: Recv YRDPOS 139681 17-03-18 06:47:41.434 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:41.434 -07 000000625 INF: Y Motor: Encoder = 139681 = motor step 109125.8 = 68.2036 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:41.434 -07 000000625 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm) 17-03-18 06:47:41.434 -07 000000625 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.842 mm, average velocity = 2.121 mm/sec 17-03-18 06:47:41.614 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.007176, 17-03-18 06:47:41.894 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:41.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:42.384 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:42.384 -07 000000591 INF: FPGA: Recv YRDPOS 139681 17-03-18 06:47:42.394 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:42.394 -07 000000625 INF: Y Motor: Encoder = 139681 = motor step 109125.8 = 68.2036 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:42.424 -07 000000625 INF: Y Motor: After move to 68.212608, error = -0.008995, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:42.424 -07 000000625 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:47:42.424 -07 000000625 INF: Y Motor: Moved to 68.2036 after 1459 ms (table move) 17-03-18 06:47:42.424 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130433 mm (DAC = 28493) 17-03-18 06:47:42.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.424 -07 000000591 INF: FPGA: Recv ZSGSRD 29593 17-03-18 06:47:42.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:47:42.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.434 -07 000000462 INF: FPGA: Recv ZSGSRD 29588 17-03-18 06:47:42.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.444 -07 000000474 INF: FPGA: Recv ZSGSRD 29587 17-03-18 06:47:42.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.454 -07 000000447 INF: FPGA: Recv ZSGSRD 29596 17-03-18 06:47:42.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:47:42.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.464 -07 000000462 INF: FPGA: Recv ZSGSRD 29592 17-03-18 06:47:42.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.474 -07 000000474 INF: FPGA: Recv ZSGSRD 29595 17-03-18 06:47:42.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.484 -07 000000462 INF: FPGA: Recv ZSGSRD 29595 17-03-18 06:47:42.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.494 -07 000000591 INF: FPGA: Recv ZSGSRD 29597 17-03-18 06:47:42.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.504 -07 000000625 INF: FPGA: Recv ZSGSRD 29599 17-03-18 06:47:42.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.514 -07 000000455 INF: FPGA: Recv ZSGSRD 29592 17-03-18 06:47:42.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.524 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:42.524 -07 000000626 INF: FPGA: Recv ZPIEZORD 25081 17-03-18 06:47:42.534 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.534 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.348 V. Piezo Error = -9.9 V. 17-03-18 06:47:42.534 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.4 um, Read 10 ADC samples: Avg = 29593 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29594 (-129.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29587 (-129.6 uncal um), Max = 29599 (-129.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:47:42.534 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29593, posNoise = 6, negNoise = 6 17-03-18 06:47:42.534 -07 000000610 INF: Z Motor: After move to -0.130433, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:42.534 -07 000000610 INF: Z Motor: Settle wait time = 1461 ms, measure time = 106 ms (allowed 150 ms), total time = 1567 ms 17-03-18 06:47:42.534 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:42.584 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1620 ms 17-03-18 06:47:42.584 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:42.584 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20361328125, Z-position -0.130435061922267. ---------- 17-03-18 06:47:42.584 -07 000000610 INF: Cycle 153 Tile 11 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:42.584 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28316, sync = True, waitForSettling = True) 17-03-18 06:47:42.584 -07 000000610 INF: Z Motor: Moving to -0.129622 mm, started at -0.130435 mm, distance = 0.81 um 17-03-18 06:47:42.584 -07 000000610 INF: FPGA: Xmit ZDACW 28316\n [Z Motor] 17-03-18 06:47:42.584 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 06:47:42.594 -07 000000610 INF: FPGA: 'ZDACW 28316' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:47:42.594 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:42.594 -07 000000455 INF: FPGA: Recv ZDACR 28316 17-03-18 06:47:42.604 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.604 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:42.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.754 -07 000000474 INF: FPGA: Recv ZSGSRD 29468 17-03-18 06:47:42.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:42.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.764 -07 000000462 INF: FPGA: Recv ZSGSRD 29461 17-03-18 06:47:42.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.774 -07 000000455 INF: FPGA: Recv ZSGSRD 29466 17-03-18 06:47:42.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.784 -07 000000462 INF: FPGA: Recv ZSGSRD 29470 17-03-18 06:47:42.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.794 -07 000000590 INF: FPGA: Recv ZSGSRD 29466 17-03-18 06:47:42.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.804 -07 000000447 INF: FPGA: Recv ZSGSRD 29469 17-03-18 06:47:42.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.814 -07 000000455 INF: FPGA: Recv ZSGSRD 29471 17-03-18 06:47:42.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.824 -07 000000462 INF: FPGA: Recv ZSGSRD 29469 17-03-18 06:47:42.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.834 -07 000000462 INF: FPGA: Recv ZSGSRD 29469 17-03-18 06:47:42.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:42.844 -07 000000625 INF: FPGA: Recv ZSGSRD 29463 17-03-18 06:47:42.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.854 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:42.854 -07 000000462 INF: FPGA: Recv ZPIEZORD 24938 17-03-18 06:47:42.864 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:42.864 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.321 V. Piezo Error = -9.9 V. 17-03-18 06:47:42.864 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.6 um, Read 10 ADC samples: Avg = 29467 (-128.8 uncal um), Error = 0.8 uncal um, Median = 29468 (-128.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29461 (-128.8 uncal um), Max = 29471 (-128.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:47:42.864 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29467, posNoise = 4, negNoise = 6 17-03-18 06:47:42.864 -07 000000610 INF: Z Motor: After move to -0.129622, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:42.864 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 06:47:42.864 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:42.864 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:42.864 -07 000000625 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:42.864 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:42.864 -07 000000474 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:42.864 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:42.864 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:42.864 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:42.864 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:42.864 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:42.864 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:42.864 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:42.874 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:47:42.874 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:42.874 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-18 06:47:42.874 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:42.874 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 06:47:42.874 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 06:47:42.874 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 06:47:42.874 -07 000000474 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 06:47:42.884 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28493 150\n [Camera] 17-03-18 06:47:43.084 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:43.544 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:43.544 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:43.544 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:43.554 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:43.554 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:43.554 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:43.554 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:43.554 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start. 17-03-18 06:47:43.554 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:43.554 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2331803864, 0x0, 418435064) start. 17-03-18 06:47:43.744 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28493 851 17-03-18 06:47:43.894 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:43.924 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2331803864, 0x0, 418435064) end. Duration was 370 ms. 17-03-18 06:47:43.924 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 374 ms. 17-03-18 06:47:43.924 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms. 17-03-18 06:47:43.924 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:43.924 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 06:47:43.924 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:43.934 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:47:43.934 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 06:47:43.934 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:47:43.944 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-18 06:47:44.114 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:44.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:44.114 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:44.124 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:44.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:44.124 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:44.124 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:44.124 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-18 06:47:44.124 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:44.124 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-18 06:47:44.304 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:47:44.304 -07 000000591 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:44.304 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28493 150' command took 2 ms to send, 1416 ms to get response, and 1424 ms overall 17-03-18 06:47:44.304 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.130157 17-03-18 06:47:44.304 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13016 mm 17-03-18 06:47:44.304 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:44.444 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 28433, sync = True, waitForSettling = False) 17-03-18 06:47:44.444 -07 000000447 INF: Z Motor: Moving to -0.130158 mm, started at -0.129626 mm, distance = -0.53 um 17-03-18 06:47:44.444 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True) 17-03-18 06:47:44.444 -07 000000455 INF: Y Motor: Moving to 69.0426 mm, started at 68.2036 mm, delta = 0.8390 mm 17-03-18 06:47:44.444 -07 000000447 INF: FPGA: Xmit ZDACW 28433\n [Z Motor] 17-03-18 06:47:44.444 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 06:47:44.454 -07 000000447 INF: FPGA: 'ZDACW 28433' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:47:44.454 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:44.454 -07 000000590 INF: FPGA: Recv YRDPOS 139681 17-03-18 06:47:44.464 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-18 06:47:44.464 -07 000000455 INF: Y Motor: Encoder = 139681 = motor step 109125.8 = 68.2036 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:44.464 -07 000000455 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:44.464 -07 000000455 INF: Y Motor: Moving 1342 steps-18 17-03-18 06:47:44.464 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:44.464 -07 000000581 INF: FPGA: Recv ZDACR 28433 17-03-18 06:47:44.474 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:47:44.474 -07 000000447 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet)) 17-03-18 06:47:44.474 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:44.504 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 383 ms. 17-03-18 06:47:44.504 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 06:47:44.504 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:44.504 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 379 ms. 17-03-18 06:47:44.504 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-18 06:47:44.504 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:44.514 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:47:44.514 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-18 06:47:44.514 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:47:44.514 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms. 17-03-18 06:47:44.844 -07 000000474 INF: FPGA: Recv YMVTILE 17-03-18 06:47:44.844 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 06:47:44.904 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:44.904 -07 000000447 INF: FPGA: Recv YRDPOS 141365 17-03-18 06:47:44.914 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:47:44.914 -07 000000455 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:44.914 -07 000000455 INF: Y Motor: Position error before settling (table move) = -34 encoder counts (-0.017 mm) 17-03-18 06:47:44.914 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.839 mm, average velocity = 2.162 mm/sec 17-03-18 06:47:45.864 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:45.864 -07 000000474 INF: FPGA: Recv YRDPOS 141365 17-03-18 06:47:45.874 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:45.874 -07 000000455 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:45.904 -07 000000455 INF: Y Motor: After move to 69.042610, error = -0.016731, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:45.904 -07 000000455 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:47:45.904 -07 000000455 INF: Y Motor: Moved to 69.0259 after 1458 ms (table move) 17-03-18 06:47:45.904 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130158 mm (DAC = 28433) 17-03-18 06:47:45.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:45.904 -07 000000561 INF: FPGA: Recv ZSGSRD 29556 17-03-18 06:47:45.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:47:45.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:45.914 -07 000000455 INF: FPGA: Recv ZSGSRD 29550 17-03-18 06:47:45.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:45.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:45.924 -07 000000455 INF: FPGA: Recv ZSGSRD 29540 17-03-18 06:47:45.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:45.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:45.934 -07 000000590 INF: FPGA: Recv ZSGSRD 29548 17-03-18 06:47:45.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:45.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:45.944 -07 000000462 INF: FPGA: Recv ZSGSRD 29556 17-03-18 06:47:45.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:45.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:45.954 -07 000000590 INF: FPGA: Recv ZSGSRD 29548 17-03-18 06:47:45.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:45.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:45.964 -07 000000474 INF: FPGA: Recv ZSGSRD 29554 17-03-18 06:47:45.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:45.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:45.974 -07 000000590 INF: FPGA: Recv ZSGSRD 29551 17-03-18 06:47:45.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:45.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:45.984 -07 000000581 INF: FPGA: Recv ZSGSRD 29550 17-03-18 06:47:45.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:45.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:45.994 -07 000000462 INF: FPGA: Recv ZSGSRD 29555 17-03-18 06:47:46.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.004 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:46.004 -07 000000561 INF: FPGA: Recv ZPIEZORD 25045 17-03-18 06:47:46.014 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.014 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.339 V. Piezo Error = -9.9 V. 17-03-18 06:47:46.014 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.2 um, Read 10 ADC samples: Avg = 29551 (-129.4 uncal um), Error = 0.8 uncal um, Median = 29550 (-129.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29540 (-129.3 uncal um), Max = 29556 (-129.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um) 17-03-18 06:47:46.014 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29551, posNoise = 5, negNoise = 11 17-03-18 06:47:46.014 -07 000000610 INF: Z Motor: After move to -0.130158, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:46.014 -07 000000610 INF: Z Motor: Settle wait time = 1460 ms, measure time = 106 ms (allowed 150 ms), total time = 1566 ms 17-03-18 06:47:46.014 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:46.064 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1751 ms 17-03-18 06:47:46.064 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:46.064 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02587890625, Z-position -0.130165245012313. ---------- 17-03-18 06:47:46.064 -07 000000610 INF: Cycle 153 Tile 12 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:46.064 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28256, sync = True, waitForSettling = True) 17-03-18 06:47:46.064 -07 000000610 INF: Z Motor: Moving to -0.129348 mm, started at -0.130165 mm, distance = 0.82 um 17-03-18 06:47:46.064 -07 000000610 INF: FPGA: Xmit ZDACW 28256\n [Z Motor] 17-03-18 06:47:46.064 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 06:47:46.074 -07 000000610 INF: FPGA: 'ZDACW 28256' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:47:46.074 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:46.074 -07 000000581 INF: FPGA: Recv ZDACR 28256 17-03-18 06:47:46.084 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.084 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:46.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:46.234 -07 000000474 INF: FPGA: Recv ZSGSRD 29425 17-03-18 06:47:46.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:46.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:46.244 -07 000000581 INF: FPGA: Recv ZSGSRD 29422 17-03-18 06:47:46.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:46.254 -07 000000626 INF: FPGA: Recv ZSGSRD 29423 17-03-18 06:47:46.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:46.264 -07 000000561 INF: FPGA: Recv ZSGSRD 29428 17-03-18 06:47:46.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:46.274 -07 000000455 INF: FPGA: Recv ZSGSRD 29429 17-03-18 06:47:46.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:46.284 -07 000000581 INF: FPGA: Recv ZSGSRD 29424 17-03-18 06:47:46.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:46.294 -07 000000474 INF: FPGA: Recv ZSGSRD 29427 17-03-18 06:47:46.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:46.304 -07 000000561 INF: FPGA: Recv ZSGSRD 29427 17-03-18 06:47:46.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:46.314 -07 000000455 INF: FPGA: Recv ZSGSRD 29425 17-03-18 06:47:46.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:46.324 -07 000000447 INF: FPGA: Recv ZSGSRD 29422 17-03-18 06:47:46.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.334 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:46.334 -07 000000455 INF: FPGA: Recv ZPIEZORD 24902 17-03-18 06:47:46.344 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:46.344 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.312 V. Piezo Error = -9.9 V. 17-03-18 06:47:46.344 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.3 um, Read 10 ADC samples: Avg = 29425 (-128.6 uncal um), Error = 0.8 uncal um, Median = 29425 (-128.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29422 (-128.6 uncal um), Max = 29429 (-128.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 06:47:46.344 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29425, posNoise = 4, negNoise = 3 17-03-18 06:47:46.344 -07 000000610 INF: Z Motor: After move to -0.129348, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:46.344 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 06:47:46.344 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:46.344 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:46.344 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:46.344 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:46.344 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:46.344 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:46.344 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:46.344 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:46.344 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 06:47:46.344 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:46.344 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 06:47:46.344 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:46.354 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:46.354 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:46.354 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:47:46.354 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:46.364 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 06:47:46.364 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms. 17-03-18 06:47:46.364 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 06:47:46.364 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms. 17-03-18 06:47:46.374 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28433 150\n [Camera] 17-03-18 06:47:46.564 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:46.894 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:46.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:46.984 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.985358, 17-03-18 06:47:47.034 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:47.034 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:47.034 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:47.034 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:47.034 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:47.044 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:47.044 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:47.044 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-18 06:47:47.044 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:47.044 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 06:47:47.224 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28433 851 17-03-18 06:47:47.374 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:47.414 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 367 ms. 17-03-18 06:47:47.414 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 367 ms. 17-03-18 06:47:47.414 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:47.414 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 06:47:47.414 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms. 17-03-18 06:47:47.414 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:47.414 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:47.414 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:47.424 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 06:47:47.424 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms. 17-03-18 06:47:47.604 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:47.604 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:47.604 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:47.604 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:47.604 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:47.604 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:47.604 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:47.604 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start. 17-03-18 06:47:47.614 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:47.614 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start. 17-03-18 06:47:47.794 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:47:47.794 -07 000000581 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:47.794 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28433 150' command took 2 ms to send, 1415 ms to get response, and 1424 ms overall 17-03-18 06:47:47.794 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.129766 17-03-18 06:47:47.794 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.12977 mm 17-03-18 06:47:47.794 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:47.794 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True) 17-03-18 06:47:47.804 -07 000000626 INF: Y Motor: Moving to 69.8726 mm, started at 69.0259 mm, delta = 0.8467 mm 17-03-18 06:47:47.804 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 28347, sync = True, waitForSettling = False) 17-03-18 06:47:47.804 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:47.804 -07 000000590 INF: Z Motor: Moving to -0.129764 mm, started at -0.129356 mm, distance = -0.41 um 17-03-18 06:47:47.804 -07 000000462 INF: FPGA: Recv YRDPOS 141365 17-03-18 06:47:47.814 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:47.814 -07 000000626 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:47.814 -07 000000626 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:47.814 -07 000000626 INF: Y Motor: Moving 1355 steps-34 17-03-18 06:47:47.814 -07 000000590 INF: FPGA: Xmit ZDACW 28347\n [Z Motor] 17-03-18 06:47:47.814 -07 000000512 INF: FPGA: Recv ZDACW 17-03-18 06:47:47.824 -07 000000590 INF: FPGA: 'ZDACW 28347' command took 2 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:47:47.824 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:47.834 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:47.834 -07 000000512 INF: FPGA: Recv ZDACR 28347 17-03-18 06:47:47.844 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:47:47.844 -07 000000590 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet)) 17-03-18 06:47:47.984 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 06:47:47.984 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-18 06:47:47.984 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:47.984 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 06:47:47.984 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-18 06:47:47.984 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:47.994 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:47.994 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:47.994 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-18 06:47:47.994 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 06:47:48.204 -07 000000581 INF: FPGA: Recv YMVTILE 17-03-18 06:47:48.204 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 388 ms overall 17-03-18 06:47:48.254 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:48.254 -07 000000455 INF: FPGA: Recv YRDPOS 143077 17-03-18 06:47:48.264 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:47:48.264 -07 000000626 INF: Y Motor: Encoder = 143077 = motor step 111778.9 = 69.8618 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:48.264 -07 000000626 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm) 17-03-18 06:47:48.264 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.847 mm, average velocity = 2.171 mm/sec 17-03-18 06:47:49.214 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:49.214 -07 000000462 INF: FPGA: Recv YRDPOS 143078 17-03-18 06:47:49.224 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:49.224 -07 000000626 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:49.254 -07 000000626 INF: Y Motor: After move to 69.872612, error = -0.010307, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:49.254 -07 000000626 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 06:47:49.254 -07 000000626 INF: Y Motor: Moved to 69.8623 after 1452 ms (table move) 17-03-18 06:47:49.254 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129764 mm (DAC = 28347) 17-03-18 06:47:49.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.254 -07 000000626 INF: FPGA: Recv ZSGSRD 29492 17-03-18 06:47:49.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:47:49.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.264 -07 000000512 INF: FPGA: Recv ZSGSRD 29496 17-03-18 06:47:49.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.274 -07 000000462 INF: FPGA: Recv ZSGSRD 29487 17-03-18 06:47:49.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.284 -07 000000512 INF: FPGA: Recv ZSGSRD 29489 17-03-18 06:47:49.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.294 -07 000000462 INF: FPGA: Recv ZSGSRD 29485 17-03-18 06:47:49.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.304 -07 000000462 INF: FPGA: Recv ZSGSRD 29481 17-03-18 06:47:49.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.314 -07 000000626 INF: FPGA: Recv ZSGSRD 29492 17-03-18 06:47:49.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.324 -07 000000626 INF: FPGA: Recv ZSGSRD 29491 17-03-18 06:47:49.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.334 -07 000000561 INF: FPGA: Recv ZSGSRD 29490 17-03-18 06:47:49.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.344 -07 000000626 INF: FPGA: Recv ZSGSRD 29492 17-03-18 06:47:49.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.354 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:49.354 -07 000000561 INF: FPGA: Recv ZPIEZORD 25013 17-03-18 06:47:49.364 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.364 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.325 V. Piezo Error = -9.8 V. 17-03-18 06:47:49.364 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.8 um, Read 10 ADC samples: Avg = 29490 (-129.0 uncal um), Error = 0.8 uncal um, Median = 29490 (-129.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29481 (-128.9 uncal um), Max = 29496 (-129.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 06:47:49.364 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29490, posNoise = 6, negNoise = 9 17-03-18 06:47:49.364 -07 000000610 INF: Z Motor: After move to -0.129764, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:49.364 -07 000000610 INF: Z Motor: Settle wait time = 1454 ms, measure time = 106 ms (allowed 150 ms), total time = 1560 ms 17-03-18 06:47:49.364 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:49.414 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms 17-03-18 06:47:49.414 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:49.414 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.8623046875, Z-position -0.129773368071666. ---------- 17-03-18 06:47:49.414 -07 000000610 INF: Cycle 153 Tile 13 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:49.414 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28171, sync = True, waitForSettling = True) 17-03-18 06:47:49.414 -07 000000610 INF: Z Motor: Moving to -0.128959 mm, started at -0.129773 mm, distance = 0.81 um 17-03-18 06:47:49.414 -07 000000610 INF: FPGA: Xmit ZDACW 28171\n [Z Motor] 17-03-18 06:47:49.414 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 06:47:49.424 -07 000000610 INF: FPGA: 'ZDACW 28171' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:47:49.424 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:49.424 -07 000000447 INF: FPGA: Recv ZDACR 28171 17-03-18 06:47:49.434 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.434 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:49.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.584 -07 000000462 INF: FPGA: Recv ZSGSRD 29366 17-03-18 06:47:49.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:49.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.594 -07 000000447 INF: FPGA: Recv ZSGSRD 29368 17-03-18 06:47:49.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.604 -07 000000462 INF: FPGA: Recv ZSGSRD 29366 17-03-18 06:47:49.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.614 -07 000000462 INF: FPGA: Recv ZSGSRD 29363 17-03-18 06:47:49.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.624 -07 000000590 INF: FPGA: Recv ZSGSRD 29368 17-03-18 06:47:49.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.634 -07 000000581 INF: FPGA: Recv ZSGSRD 29366 17-03-18 06:47:49.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.644 -07 000000590 INF: FPGA: Recv ZSGSRD 29366 17-03-18 06:47:49.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.654 -07 000000581 INF: FPGA: Recv ZSGSRD 29365 17-03-18 06:47:49.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.664 -07 000000581 INF: FPGA: Recv ZSGSRD 29365 17-03-18 06:47:49.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:49.674 -07 000000581 INF: FPGA: Recv ZSGSRD 29366 17-03-18 06:47:49.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.684 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:49.684 -07 000000590 INF: FPGA: Recv ZPIEZORD 24826 17-03-18 06:47:49.694 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:49.694 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.299 V. Piezo Error = -10.0 V. 17-03-18 06:47:49.694 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.0 um, Read 10 ADC samples: Avg = 29366 (-128.2 uncal um), Error = 0.8 uncal um, Median = 29366 (-128.2 uncal um), StdDev = 1 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 29363 (-128.2 uncal um), Max = 29368 (-128.2 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 06:47:49.694 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29366, posNoise = 2, negNoise = 3 17-03-18 06:47:49.694 -07 000000610 INF: Z Motor: After move to -0.128959, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:49.694 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 06:47:49.694 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:49.694 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:49.694 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:49.694 -07 000000437 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:49.694 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:49.694 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:49.694 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:49.694 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:49.694 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:49.694 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:49.694 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:49.694 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:49.694 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:49.694 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:49.704 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 06:47:49.704 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:49.714 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 06:47:49.714 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 06:47:49.714 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 06:47:49.714 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:47:49.714 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28347 150\n [Camera] 17-03-18 06:47:49.924 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning red on 194 17-03-18 06:47:50.384 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:50.394 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:50.394 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:50.394 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:50.394 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:50.394 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:50.394 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:50.394 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 06:47:50.394 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:50.394 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start. 17-03-18 06:47:50.574 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28347 851 17-03-18 06:47:50.724 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:50.774 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 06:47:50.774 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 06:47:50.774 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:50.774 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:50.774 -07 000000474 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 06:47:50.774 -07 000000474 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 06:47:50.774 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:50.784 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:50.784 -07 000000474 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 06:47:50.784 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 06:47:50.954 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:50.954 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:50.954 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:50.954 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:50.954 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2619673760, 0x0, 391868352) start. 17-03-18 06:47:50.954 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:50.954 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:50.954 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:50.954 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:50.954 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 06:47:51.144 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:47:51.144 -07 000000581 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:51.144 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28347 150' command took 2 ms to send, 1413 ms to get response, and 1424 ms overall 17-03-18 06:47:51.144 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 06:47:51.144 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 14 at Y-position 69.8623046875, Z-Position -0.128976765766087. ------ 17-03-18 06:47:51.154 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:47:51.154 -07 000000581 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.13531 mm 17-03-18 06:47:51.154 -07 000000581 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:51.154 -07 000000590 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:47:51.154 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True) 17-03-18 06:47:51.154 -07 000000480 INF: Y Motor: Moving to 70.7026 mm, started at 69.8623 mm, delta = 0.8403 mm 17-03-18 06:47:51.154 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 29559, sync = True, waitForSettling = False) 17-03-18 06:47:51.154 -07 000000626 INF: Z Motor: Moving to -0.135312 mm, started at -0.128977 mm, distance = -6.34 um 17-03-18 06:47:51.164 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:51.164 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:51.164 -07 000000561 INF: FPGA: Recv YRDPOS 143078 17-03-18 06:47:51.174 -07 000000626 INF: FPGA: Xmit ZDACW 29559\n [Z Motor] 17-03-18 06:47:51.174 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-18 06:47:51.174 -07 000000480 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:51.174 -07 000000480 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:51.174 -07 000000480 INF: Y Motor: Moving 1344 steps-22 17-03-18 06:47:51.174 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 06:47:51.184 -07 000000462 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:47:51.184 -07 000000626 INF: FPGA: 'ZDACW 29559' command took 0 ms to send, 0 ms to get response, and 25 ms overall 17-03-18 06:47:51.194 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:51.204 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:51.204 -07 000000455 INF: FPGA: Recv ZDACR 29559 17-03-18 06:47:51.214 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:47:51.214 -07 000000626 INF: Z Motor: MoveAbsStepped took 55 ms (did NOT wait for settling yet)) 17-03-18 06:47:51.334 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 06:47:51.334 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms. 17-03-18 06:47:51.334 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:51.334 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2619673760, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 06:47:51.334 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 06:47:51.334 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:51.334 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:51.334 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:51.334 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 06:47:51.344 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 06:47:51.384 -07 000000626 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:47:51.384 -07 000000462 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall 17-03-18 06:47:51.564 -07 000000561 INF: FPGA: Recv YMVTILE 17-03-18 06:47:51.564 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 06:47:51.624 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:51.624 -07 000000437 INF: FPGA: Recv YRDPOS 144767 17-03-18 06:47:51.634 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:47:51.634 -07 000000480 INF: Y Motor: Encoder = 144767 = motor step 113099.2 = 70.6870 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:51.634 -07 000000480 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm) 17-03-18 06:47:51.634 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.840 mm, average velocity = 2.117 mm/sec 17-03-18 06:47:51.894 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:51.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:52.354 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.962185, 17-03-18 06:47:52.584 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:52.584 -07 000000447 INF: FPGA: Recv YRDPOS 144768 17-03-18 06:47:52.594 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:52.594 -07 000000480 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:52.624 -07 000000480 INF: Y Motor: After move to 70.702606, error = -0.015106, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:52.624 -07 000000480 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 06:47:52.624 -07 000000480 INF: Y Motor: Moved to 70.6875 after 1469 ms (table move) 17-03-18 06:47:52.624 -07 000000581 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135312 mm (DAC = 29559) 17-03-18 06:47:52.624 -07 000000581 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:52.624 -07 000000447 INF: FPGA: Recv ZSGSRD 30354 17-03-18 06:47:52.634 -07 000000581 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:47:52.634 -07 000000581 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:52.634 -07 000000480 INF: FPGA: Recv ZSGSRD 30352 17-03-18 06:47:52.644 -07 000000581 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:52.644 -07 000000581 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:52.644 -07 000000561 INF: FPGA: Recv ZSGSRD 30349 17-03-18 06:47:52.654 -07 000000581 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:52.654 -07 000000581 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:52.654 -07 000000590 INF: FPGA: Recv ZSGSRD 30350 17-03-18 06:47:52.664 -07 000000581 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:52.684 -07 000000581 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:52.684 -07 000000447 INF: FPGA: Recv ZSGSRD 30358 17-03-18 06:47:52.694 -07 000000581 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:47:52.694 -07 000000581 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:52.694 -07 000000437 INF: FPGA: Recv ZSGSRD 30352 17-03-18 06:47:52.704 -07 000000581 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:52.714 -07 000000581 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:52.714 -07 000000512 INF: FPGA: Recv ZSGSRD 30351 17-03-18 06:47:52.724 -07 000000581 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:47:52.724 -07 000000581 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:52.724 -07 000000480 INF: FPGA: Recv ZSGSRD 30353 17-03-18 06:47:52.734 -07 000000581 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:52.754 -07 000000581 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:52.754 -07 000000590 INF: FPGA: Recv ZSGSRD 30356 17-03-18 06:47:52.764 -07 000000581 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:47:52.764 -07 000000581 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:52.764 -07 000000480 INF: FPGA: Recv ZSGSRD 30356 17-03-18 06:47:52.774 -07 000000581 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:52.774 -07 000000581 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:52.774 -07 000000447 INF: FPGA: Recv ZPIEZORD 26143 17-03-18 06:47:52.784 -07 000000581 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:52.784 -07 000000581 INF: Z Motor: Piezo is near 35.8 V (nominally 0 to 100 V), expect near 45.1 V, since DAC is at 4.510 V. Piezo Error = -9.3 V. 17-03-18 06:47:52.784 -07 000000581 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.3 um, Read 10 ADC samples: Avg = 30353 (-134.5 uncal um), Error = 0.8 uncal um, Median = 30352 (-134.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 30349 (-134.5 uncal um), Max = 30358 (-134.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:47:52.784 -07 000000581 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30353, posNoise = 5, negNoise = 4 17-03-18 06:47:52.784 -07 000000581 INF: Z Motor: After move to -0.135312, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:52.784 -07 000000581 INF: Z Motor: Settle wait time = 1472 ms, measure time = 154 ms (allowed 150 ms), total time = 1626 ms 17-03-18 06:47:52.784 -07 000000581 INF: Z Motor: Warning: Actual position measuring time = 154 ms, longer than max expected time of 150 ms 17-03-18 06:47:52.784 -07 000000581 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1630 ms 17-03-18 06:47:52.784 -07 000000581 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:52.784 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:52.784 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:52.784 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:52.784 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:52.784 -07 000000447 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:47:52.784 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:52.784 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:52.784 -07 000000447 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:47:52.794 -07 000000447 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:52.794 -07 000000447 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:47:52.804 -07 000000447 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms. 17-03-18 06:47:52.804 -07 000000447 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms. 17-03-18 06:47:52.804 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:47:52.854 -07 000000447 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:47:53.154 -07 000000561 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:47:53.154 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:47:53.154 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:47:53.154 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) start. 17-03-18 06:47:53.194 -07 000000437 INF: FPGA: Recv @CAMSNAP 380 17-03-18 06:47:53.194 -07 000000447 INF: FPGA: Recv CAMSNAP 17-03-18 06:47:53.194 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 373 ms to get response, and 384 ms overall 17-03-18 06:47:53.284 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) end. Duration was 126 ms. 17-03-18 06:47:53.284 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:53.284 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 06:47:53.284 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 06:47:53.294 -07 000000447 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:47:53.294 -07 000000480 INF: Autofocus start 17-03-18 06:47:53.294 -07 000000480 INF: MeasureProfile start 17-03-18 06:47:53.294 -07 000000590 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:47:53.304 -07 000000447 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:47:53.304 -07 000000447 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:47:53.304 -07 000000480 INF: MeasureProfile done 17-03-18 06:47:53.304 -07 000000480 INF: X=48 Z correction [um]=0.2069503 17-03-18 06:47:53.304 -07 000000480 INF: Autofocus finished 17-03-18 06:47:53.504 -07 000000474 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:47:53.504 -07 000000447 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 06:47:53.504 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6875, Z-position -0.135317463150005. ---------- 17-03-18 06:47:53.504 -07 000000610 INF: Cycle 153 Tile 14 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:53.514 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28117, sync = True, waitForSettling = True) 17-03-18 06:47:53.514 -07 000000610 INF: Z Motor: Moving to -0.128711 mm, started at -0.135317 mm, distance = 6.61 um 17-03-18 06:47:53.514 -07 000000610 INF: FPGA: Xmit ZDACW 28117\n [Z Motor] 17-03-18 06:47:53.514 -07 000000512 INF: FPGA: Recv ZDACW 17-03-18 06:47:53.524 -07 000000610 INF: FPGA: 'ZDACW 28117' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:47:53.524 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:53.524 -07 000000447 INF: FPGA: Recv ZDACR 28117 17-03-18 06:47:53.534 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:53.534 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:53.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:53.684 -07 000000474 INF: FPGA: Recv ZSGSRD 29327 17-03-18 06:47:53.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:53.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:53.694 -07 000000437 INF: FPGA: Recv ZSGSRD 29327 17-03-18 06:47:53.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:53.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:53.704 -07 000000474 INF: FPGA: Recv ZSGSRD 29326 17-03-18 06:47:53.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:53.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:53.714 -07 000000447 INF: FPGA: Recv ZSGSRD 29325 17-03-18 06:47:53.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:53.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:53.724 -07 000000512 INF: FPGA: Recv ZSGSRD 29321 17-03-18 06:47:53.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:53.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:53.734 -07 000000581 INF: FPGA: Recv ZSGSRD 29331 17-03-18 06:47:53.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:53.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:53.744 -07 000000590 INF: FPGA: Recv ZSGSRD 29323 17-03-18 06:47:53.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:53.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:53.754 -07 000000561 INF: FPGA: Recv ZSGSRD 29327 17-03-18 06:47:53.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:53.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:53.764 -07 000000474 INF: FPGA: Recv ZSGSRD 29327 17-03-18 06:47:53.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:53.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:53.774 -07 000000447 INF: FPGA: Recv ZSGSRD 29322 17-03-18 06:47:53.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:53.784 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:53.784 -07 000000474 INF: FPGA: Recv ZPIEZORD 24820 17-03-18 06:47:53.794 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:53.794 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.290 V. Piezo Error = -9.9 V. 17-03-18 06:47:53.794 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.7 um, Read 10 ADC samples: Avg = 29326 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29326 (-127.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29321 (-127.9 uncal um), Max = 29331 (-128.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:47:53.794 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29326, posNoise = 5, negNoise = 5 17-03-18 06:47:53.794 -07 000000610 INF: Z Motor: After move to -0.128711, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:53.794 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-18 06:47:53.794 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:53.794 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:53.794 -07 000000437 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:53.794 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:53.794 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:53.794 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:53.794 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:53.794 -07 000000581 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:53.794 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:53.794 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:53.794 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:53.794 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:53.804 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:47:53.804 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:53.804 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 06:47:53.804 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:53.814 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 06:47:53.814 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 06:47:53.814 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 06:47:53.814 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms. 17-03-18 06:47:53.814 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28294 150\n [Camera] 17-03-18 06:47:54.014 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:54.484 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:54.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:54.484 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:54.484 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:54.484 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start. 17-03-18 06:47:54.484 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:54.484 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:54.484 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:54.484 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:54.484 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start. 17-03-18 06:47:54.674 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28294 851 17-03-18 06:47:54.824 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:54.864 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 382 ms. 17-03-18 06:47:54.864 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 06:47:54.864 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:54.864 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 381 ms. 17-03-18 06:47:54.864 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms. 17-03-18 06:47:54.864 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:54.874 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:54.874 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-18 06:47:54.874 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:54.874 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-18 06:47:55.044 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:55.044 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:55.044 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:55.054 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:55.054 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:55.054 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:55.054 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start. 17-03-18 06:47:55.054 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:55.054 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:55.054 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start. 17-03-18 06:47:55.234 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:47:55.234 -07 000000512 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:55.234 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28294 150' command took 2 ms to send, 1419 ms to get response, and 1426 ms overall 17-03-18 06:47:55.244 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.129351 17-03-18 06:47:55.244 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.12935 mm 17-03-18 06:47:55.244 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:55.244 -07 000000625 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True) 17-03-18 06:47:55.244 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 28257, sync = True, waitForSettling = False) 17-03-18 06:47:55.244 -07 000000447 INF: Z Motor: Moving to -0.129352 mm, started at -0.128720 mm, distance = -0.63 um 17-03-18 06:47:55.244 -07 000000447 INF: FPGA: Xmit ZDACW 28257\n [Z Motor] 17-03-18 06:47:55.244 -07 000000625 INF: Y Motor: Moving to 71.5326 mm, started at 70.6875 mm, delta = 0.8451 mm 17-03-18 06:47:55.244 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 06:47:55.254 -07 000000447 INF: FPGA: 'ZDACW 28257' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 06:47:55.254 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:55.254 -07 000000474 INF: FPGA: Recv YRDPOS 144768 17-03-18 06:47:55.264 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:55.264 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall 17-03-18 06:47:55.264 -07 000000625 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:55.264 -07 000000625 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:55.264 -07 000000625 INF: Y Motor: Moving 1352 steps-32 17-03-18 06:47:55.264 -07 000000480 INF: FPGA: Recv ZDACR 28257 17-03-18 06:47:55.274 -07 000000625 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:55.274 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:47:55.274 -07 000000447 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet)) 17-03-18 06:47:55.434 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 378 ms. 17-03-18 06:47:55.434 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-18 06:47:55.434 -07 000000581 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:55.544 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 498 ms. 17-03-18 06:47:55.544 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 498 ms. 17-03-18 06:47:55.544 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:55.554 -07 000000581 INF: Camera: CopyActivePixFullImage end. Duration was 122 ms. 17-03-18 06:47:55.554 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:55.554 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 506 ms. 17-03-18 06:47:55.564 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 509 ms. 17-03-18 06:47:55.644 -07 000000561 INF: FPGA: Recv YMVTILE 17-03-18 06:47:55.644 -07 000000625 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 06:47:55.704 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:55.704 -07 000000474 INF: FPGA: Recv YRDPOS 146468 17-03-18 06:47:55.714 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:47:55.714 -07 000000625 INF: Y Motor: Encoder = 146468 = motor step 114428.1 = 71.5176 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:55.714 -07 000000625 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 06:47:55.714 -07 000000625 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.845 mm, average velocity = 2.178 mm/sec 17-03-18 06:47:56.664 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:56.664 -07 000000561 INF: FPGA: Recv YRDPOS 146468 17-03-18 06:47:56.674 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:56.674 -07 000000625 INF: Y Motor: Encoder = 146468 = motor step 114428.1 = 71.5176 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:56.704 -07 000000625 INF: Y Motor: After move to 71.532608, error = -0.015030, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:47:56.704 -07 000000625 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:47:56.704 -07 000000625 INF: Y Motor: Moved to 71.5176 after 1459 ms (table move) 17-03-18 06:47:56.704 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129352 mm (DAC = 28257) 17-03-18 06:47:56.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:56.704 -07 000000625 INF: FPGA: Recv ZSGSRD 29427 17-03-18 06:47:56.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:47:56.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:56.714 -07 000000474 INF: FPGA: Recv ZSGSRD 29431 17-03-18 06:47:56.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:56.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:56.724 -07 000000625 INF: FPGA: Recv ZSGSRD 29427 17-03-18 06:47:56.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:56.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:56.734 -07 000000487 INF: FPGA: Recv ZSGSRD 29424 17-03-18 06:47:56.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:56.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:56.744 -07 000000447 INF: FPGA: Recv ZSGSRD 29422 17-03-18 06:47:56.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:56.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:56.754 -07 000000487 INF: FPGA: Recv ZSGSRD 29431 17-03-18 06:47:56.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:56.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:56.764 -07 000000487 INF: FPGA: Recv ZSGSRD 29420 17-03-18 06:47:56.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:56.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:56.774 -07 000000487 INF: FPGA: Recv ZSGSRD 29424 17-03-18 06:47:56.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:56.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:56.784 -07 000000447 INF: FPGA: Recv ZSGSRD 29424 17-03-18 06:47:56.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:47:56.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:56.794 -07 000000447 INF: FPGA: Recv ZSGSRD 29426 17-03-18 06:47:56.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:56.804 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:56.804 -07 000000487 INF: FPGA: Recv ZPIEZORD 24957 17-03-18 06:47:56.814 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:56.814 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.312 V. Piezo Error = -9.8 V. 17-03-18 06:47:56.814 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.4 um, Read 10 ADC samples: Avg = 29426 (-128.6 uncal um), Error = 0.8 uncal um, Median = 29425 (-128.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29420 (-128.5 uncal um), Max = 29431 (-128.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 06:47:56.814 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29426, posNoise = 5, negNoise = 6 17-03-18 06:47:56.814 -07 000000610 INF: Z Motor: After move to -0.129352, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:56.814 -07 000000610 INF: Z Motor: Settle wait time = 1461 ms, measure time = 105 ms (allowed 150 ms), total time = 1566 ms 17-03-18 06:47:56.814 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-18 06:47:56.864 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1618 ms 17-03-18 06:47:56.864 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:47:56.864 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.517578125, Z-position -0.129362218494593. ---------- 17-03-18 06:47:56.864 -07 000000610 INF: Cycle 153 Tile 15 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:47:56.864 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28080, sync = True, waitForSettling = True) 17-03-18 06:47:56.864 -07 000000610 INF: Z Motor: Moving to -0.128542 mm, started at -0.129362 mm, distance = 0.82 um 17-03-18 06:47:56.864 -07 000000610 INF: FPGA: Xmit ZDACW 28080\n [Z Motor] 17-03-18 06:47:56.864 -07 000000581 INF: FPGA: Recv ZDACW 17-03-18 06:47:56.874 -07 000000610 INF: FPGA: 'ZDACW 28080' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:47:56.874 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:56.874 -07 000000581 INF: FPGA: Recv ZDACR 28080 17-03-18 06:47:56.884 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:56.884 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:47:56.894 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:47:56.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:47:57.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:57.034 -07 000000487 INF: FPGA: Recv ZSGSRD 29302 17-03-18 06:47:57.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:47:57.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:57.044 -07 000000474 INF: FPGA: Recv ZSGSRD 29298 17-03-18 06:47:57.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:57.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:57.054 -07 000000487 INF: FPGA: Recv ZSGSRD 29300 17-03-18 06:47:57.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:57.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:57.064 -07 000000561 INF: FPGA: Recv ZSGSRD 29298 17-03-18 06:47:57.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:57.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:57.074 -07 000000561 INF: FPGA: Recv ZSGSRD 29296 17-03-18 06:47:57.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:57.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:57.084 -07 000000447 INF: FPGA: Recv ZSGSRD 29298 17-03-18 06:47:57.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:57.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:57.094 -07 000000447 INF: FPGA: Recv ZSGSRD 29304 17-03-18 06:47:57.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:57.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:57.104 -07 000000447 INF: FPGA: Recv ZSGSRD 29299 17-03-18 06:47:57.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:57.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:57.114 -07 000000512 INF: FPGA: Recv ZSGSRD 29302 17-03-18 06:47:57.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:57.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:47:57.124 -07 000000561 INF: FPGA: Recv ZSGSRD 29298 17-03-18 06:47:57.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:57.134 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:47:57.134 -07 000000512 INF: FPGA: Recv ZPIEZORD 24791 17-03-18 06:47:57.144 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:47:57.144 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.285 V. Piezo Error = -9.9 V. 17-03-18 06:47:57.144 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.5 um, Read 10 ADC samples: Avg = 29300 (-127.8 uncal um), Error = 0.8 uncal um, Median = 29298 (-127.8 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29296 (-127.8 uncal um), Max = 29304 (-127.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:47:57.144 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29300, posNoise = 4, negNoise = 4 17-03-18 06:47:57.144 -07 000000610 INF: Z Motor: After move to -0.128542, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:47:57.144 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms) 17-03-18 06:47:57.144 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:47:57.144 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:47:57.144 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:47:57.144 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:47:57.144 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:47:57.144 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:47:57.144 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:47:57.144 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:47:57.144 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:47:57.144 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:47:57.144 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:47:57.144 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:47:57.154 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:47:57.154 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:47:57.154 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:47:57.154 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:47:57.164 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 06:47:57.164 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 06:47:57.164 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 06:47:57.164 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 06:47:57.164 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28257 150\n [Camera] 17-03-18 06:47:57.364 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:47:57.724 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.988112, 17-03-18 06:47:57.834 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:47:57.834 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:47:57.834 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:57.834 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:47:57.834 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:47:57.834 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:57.834 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:57.834 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-18 06:47:57.844 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:57.844 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 06:47:58.024 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28257 851 17-03-18 06:47:58.174 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:47:58.204 -07 000000581 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 366 ms. 17-03-18 06:47:58.204 -07 000000581 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 367 ms. 17-03-18 06:47:58.204 -07 000000581 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:58.214 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 373 ms. 17-03-18 06:47:58.214 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 06:47:58.214 -07 000000437 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:58.214 -07 000000581 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:58.214 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:47:58.214 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 06:47:58.214 -07 000000581 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms. 17-03-18 06:47:58.394 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:47:58.394 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:47:58.394 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:47:58.404 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:47:58.404 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start. 17-03-18 06:47:58.404 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:47:58.404 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:47:58.404 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:47:58.404 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:47:58.404 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start. 17-03-18 06:47:58.584 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:47:58.594 -07 000000474 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:47:58.594 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28257 150' command took 4 ms to send, 1410 ms to get response, and 1424 ms overall 17-03-18 06:47:58.594 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.128892 17-03-18 06:47:58.594 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.12889 mm 17-03-18 06:47:58.594 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:47:58.594 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True) 17-03-18 06:47:58.594 -07 000000590 INF: Y Motor: Moving to 72.3626 mm, started at 71.5176 mm, delta = 0.8450 mm 17-03-18 06:47:58.594 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:58.594 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 28156, sync = True, waitForSettling = False) 17-03-18 06:47:58.594 -07 000000437 INF: Z Motor: Moving to -0.128890 mm, started at -0.128553 mm, distance = -0.34 um 17-03-18 06:47:58.594 -07 000000480 INF: FPGA: Recv YRDPOS 146468 17-03-18 06:47:58.604 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:47:58.604 -07 000000590 INF: Y Motor: Encoder = 146468 = motor step 114428.1 = 71.5176 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:58.604 -07 000000590 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:47:58.604 -07 000000590 INF: Y Motor: Moving 1352 steps-31 17-03-18 06:47:58.604 -07 000000437 INF: FPGA: Xmit ZDACW 28156\n [Z Motor] 17-03-18 06:47:58.604 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 06:47:58.614 -07 000000437 INF: FPGA: 'ZDACW 28156' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 06:47:58.614 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:47:58.624 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:47:58.624 -07 000000480 INF: FPGA: Recv ZDACR 28156 17-03-18 06:47:58.634 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:47:58.634 -07 000000437 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet)) 17-03-18 06:47:58.794 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 383 ms. 17-03-18 06:47:58.794 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-18 06:47:58.794 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:58.794 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 390 ms. 17-03-18 06:47:58.794 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 06:47:58.794 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:47:58.794 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:58.794 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:47:58.794 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms. 17-03-18 06:47:58.804 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms. 17-03-18 06:47:58.984 -07 000000480 INF: FPGA: Recv YMVTILE 17-03-18 06:47:58.984 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall 17-03-18 06:47:59.044 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:47:59.044 -07 000000447 INF: FPGA: Recv YRDPOS 148169 17-03-18 06:47:59.054 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:47:59.054 -07 000000590 INF: Y Motor: Encoder = 148169 = motor step 115757.0 = 72.3481 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:47:59.054 -07 000000590 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 06:47:59.054 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.845 mm, average velocity = 2.178 mm/sec 17-03-18 06:48:00.004 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:48:00.004 -07 000000480 INF: FPGA: Recv YRDPOS 148169 17-03-18 06:48:00.014 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:48:00.014 -07 000000590 INF: Y Motor: Encoder = 148169 = motor step 115757.0 = 72.3481 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:48:00.044 -07 000000590 INF: Y Motor: After move to 72.362610, error = -0.014465, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:48:00.044 -07 000000590 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:48:00.044 -07 000000590 INF: Y Motor: Moved to 72.3481 after 1447 ms (table move) 17-03-18 06:48:00.044 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128890 mm (DAC = 28156) 17-03-18 06:48:00.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.044 -07 000000561 INF: FPGA: Recv ZSGSRD 29357 17-03-18 06:48:00.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:48:00.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.054 -07 000000590 INF: FPGA: Recv ZSGSRD 29350 17-03-18 06:48:00.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.064 -07 000000437 INF: FPGA: Recv ZSGSRD 29347 17-03-18 06:48:00.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.074 -07 000000581 INF: FPGA: Recv ZSGSRD 29351 17-03-18 06:48:00.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.084 -07 000000561 INF: FPGA: Recv ZSGSRD 29354 17-03-18 06:48:00.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.094 -07 000000581 INF: FPGA: Recv ZSGSRD 29352 17-03-18 06:48:00.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.104 -07 000000437 INF: FPGA: Recv ZSGSRD 29348 17-03-18 06:48:00.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.114 -07 000000590 INF: FPGA: Recv ZSGSRD 29355 17-03-18 06:48:00.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.124 -07 000000447 INF: FPGA: Recv ZSGSRD 29356 17-03-18 06:48:00.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.134 -07 000000581 INF: FPGA: Recv ZSGSRD 29350 17-03-18 06:48:00.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.144 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:48:00.144 -07 000000591 INF: FPGA: Recv ZPIEZORD 24856 17-03-18 06:48:00.154 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.154 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.296 V. Piezo Error = -9.9 V. 17-03-18 06:48:00.154 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.9 um, Read 10 ADC samples: Avg = 29352 (-128.1 uncal um), Error = 0.8 uncal um, Median = 29352 (-128.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29347 (-128.1 uncal um), Max = 29357 (-128.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:48:00.154 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29352, posNoise = 5, negNoise = 5 17-03-18 06:48:00.154 -07 000000610 INF: Z Motor: After move to -0.128890, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:48:00.154 -07 000000610 INF: Z Motor: Settle wait time = 1449 ms, measure time = 105 ms (allowed 150 ms), total time = 1554 ms 17-03-18 06:48:00.154 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-18 06:48:00.204 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms 17-03-18 06:48:00.204 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:48:00.204 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34814453125, Z-position -0.128886826796103. ---------- 17-03-18 06:48:00.204 -07 000000610 INF: Cycle 153 Tile 16 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:48:00.204 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27980, sync = True, waitForSettling = True) 17-03-18 06:48:00.204 -07 000000610 INF: Z Motor: Moving to -0.128084 mm, started at -0.128887 mm, distance = 0.80 um 17-03-18 06:48:00.204 -07 000000610 INF: FPGA: Xmit ZDACW 27980\n [Z Motor] 17-03-18 06:48:00.204 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 06:48:00.214 -07 000000610 INF: FPGA: 'ZDACW 27980' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:48:00.214 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:48:00.214 -07 000000581 INF: FPGA: Recv ZDACR 27980 17-03-18 06:48:00.224 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.224 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:48:00.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.374 -07 000000590 INF: FPGA: Recv ZSGSRD 29231 17-03-18 06:48:00.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:48:00.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.384 -07 000000447 INF: FPGA: Recv ZSGSRD 29227 17-03-18 06:48:00.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.394 -07 000000561 INF: FPGA: Recv ZSGSRD 29230 17-03-18 06:48:00.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.404 -07 000000437 INF: FPGA: Recv ZSGSRD 29222 17-03-18 06:48:00.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.414 -07 000000480 INF: FPGA: Recv ZSGSRD 29227 17-03-18 06:48:00.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.424 -07 000000581 INF: FPGA: Recv ZSGSRD 29231 17-03-18 06:48:00.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.434 -07 000000590 INF: FPGA: Recv ZSGSRD 29225 17-03-18 06:48:00.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.444 -07 000000591 INF: FPGA: Recv ZSGSRD 29227 17-03-18 06:48:00.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.454 -07 000000480 INF: FPGA: Recv ZSGSRD 29224 17-03-18 06:48:00.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:00.464 -07 000000581 INF: FPGA: Recv ZSGSRD 29225 17-03-18 06:48:00.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.474 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:48:00.474 -07 000000590 INF: FPGA: Recv ZPIEZORD 24694 17-03-18 06:48:00.484 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:00.484 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.269 V. Piezo Error = -9.9 V. 17-03-18 06:48:00.484 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.1 um, Read 10 ADC samples: Avg = 29227 (-127.3 uncal um), Error = 0.8 uncal um, Median = 29227 (-127.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29222 (-127.3 uncal um), Max = 29231 (-127.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:48:00.484 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29227, posNoise = 4, negNoise = 5 17-03-18 06:48:00.484 -07 000000610 INF: Z Motor: After move to -0.128084, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:48:00.484 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 06:48:00.484 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:48:00.484 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:48:00.484 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:48:00.484 -07 000000474 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:48:00.484 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:48:00.484 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:48:00.484 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:48:00.484 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:48:00.484 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:48:00.484 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:48:00.484 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 06:48:00.484 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:48:00.494 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:48:00.494 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:48:00.494 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:48:00.494 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:48:00.504 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 06:48:00.504 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 06:48:00.504 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 06:48:00.504 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:48:00.504 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28156 150\n [Camera] 17-03-18 06:48:00.704 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:48:01.174 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:48:01.174 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:48:01.174 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:48:01.174 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:48:01.174 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:48:01.174 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:48:01.304 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:48:01.304 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-18 06:48:01.304 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:48:01.304 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:48:01.364 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28156 851 17-03-18 06:48:01.514 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:48:01.674 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 375 ms. 17-03-18 06:48:01.674 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms. 17-03-18 06:48:01.674 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:01.674 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 371 ms. 17-03-18 06:48:01.674 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 06:48:01.674 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:01.684 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:48:01.684 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 504 ms. 17-03-18 06:48:01.684 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:48:01.684 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 508 ms. 17-03-18 06:48:01.744 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:48:01.744 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:48:01.744 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:48:01.744 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:48:01.744 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:48:01.744 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:48:01.744 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:48:01.744 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start. 17-03-18 06:48:01.754 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:48:01.754 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start. 17-03-18 06:48:01.894 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:48:01.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:48:01.934 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:48:01.934 -07 000000461 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:48:01.934 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28156 150' command took 2 ms to send, 1414 ms to get response, and 1424 ms overall 17-03-18 06:48:01.934 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.128565 17-03-18 06:48:01.934 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.12856 mm 17-03-18 06:48:01.934 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:48:01.934 -07 000000437 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True) 17-03-18 06:48:01.934 -07 000000437 INF: Y Motor: Moving to 73.1926 mm, started at 72.3481 mm, delta = 0.8445 mm 17-03-18 06:48:01.934 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 28085, sync = True, waitForSettling = False) 17-03-18 06:48:01.934 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:48:01.934 -07 000000480 INF: Z Motor: Moving to -0.128565 mm, started at -0.128084 mm, distance = -0.48 um 17-03-18 06:48:01.944 -07 000000480 INF: FPGA: Xmit ZDACW 28085\n [Z Motor] 17-03-18 06:48:01.944 -07 000000461 INF: FPGA: Recv YRDPOS 148169 17-03-18 06:48:01.944 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 06:48:01.944 -07 000000437 INF: Y Motor: Encoder = 148169 = motor step 115757.0 = 72.3481 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:48:01.944 -07 000000437 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:48:01.944 -07 000000437 INF: Y Motor: Moving 1351 steps-30 17-03-18 06:48:01.944 -07 000000581 INF: FPGA: Recv ZDACW 17-03-18 06:48:01.954 -07 000000480 INF: FPGA: 'ZDACW 28085' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:48:01.954 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:48:01.954 -07 000000626 INF: FPGA: Recv ZDACR 28085 17-03-18 06:48:01.964 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:01.964 -07 000000480 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet)) 17-03-18 06:48:01.964 -07 000000437 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:48:02.124 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 06:48:02.124 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 06:48:02.124 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:02.124 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 378 ms. 17-03-18 06:48:02.134 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms. 17-03-18 06:48:02.134 -07 000000590 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:02.134 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:48:02.134 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-18 06:48:02.134 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:48:02.144 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-18 06:48:02.334 -07 000000591 INF: FPGA: Recv YMVTILE 17-03-18 06:48:02.334 -07 000000437 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 393 ms overall 17-03-18 06:48:02.394 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:48:02.394 -07 000000462 INF: FPGA: Recv YRDPOS 149862 17-03-18 06:48:02.404 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:48:02.404 -07 000000437 INF: Y Motor: Encoder = 149862 = motor step 117079.7 = 73.1748 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:48:02.404 -07 000000437 INF: Y Motor: Position error before settling (table move) = -36 encoder counts (-0.018 mm) 17-03-18 06:48:02.404 -07 000000437 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 393 ms, distance = 0.844 mm, average velocity = 2.149 mm/sec 17-03-18 06:48:03.094 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 3.977204, 17-03-18 06:48:03.354 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:48:03.354 -07 000000447 INF: FPGA: Recv YRDPOS 149862 17-03-18 06:48:03.364 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:48:03.364 -07 000000437 INF: Y Motor: Encoder = 149862 = motor step 117079.7 = 73.1748 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:48:03.394 -07 000000437 INF: Y Motor: After move to 73.192604, error = -0.017799, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:48:03.394 -07 000000437 INF: Y Motor: Position error after settling (table move) = -36 encoder counts (-0.018 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:48:03.394 -07 000000437 INF: Y Motor: Moved to 73.1748 after 1453 ms (table move) 17-03-18 06:48:03.394 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128565 mm (DAC = 28085) 17-03-18 06:48:03.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.394 -07 000000474 INF: FPGA: Recv ZSGSRD 29298 17-03-18 06:48:03.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:48:03.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.404 -07 000000474 INF: FPGA: Recv ZSGSRD 29289 17-03-18 06:48:03.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.414 -07 000000474 INF: FPGA: Recv ZSGSRD 29300 17-03-18 06:48:03.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.444 -07 000000474 INF: FPGA: Recv ZSGSRD 29300 17-03-18 06:48:03.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:48:03.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.454 -07 000000480 INF: FPGA: Recv ZSGSRD 29301 17-03-18 06:48:03.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.474 -07 000000447 INF: FPGA: Recv ZSGSRD 29304 17-03-18 06:48:03.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:48:03.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.484 -07 000000461 INF: FPGA: Recv ZSGSRD 29302 17-03-18 06:48:03.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.514 -07 000000437 INF: FPGA: Recv ZSGSRD 29295 17-03-18 06:48:03.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 06:48:03.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.524 -07 000000480 INF: FPGA: Recv ZSGSRD 29302 17-03-18 06:48:03.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.534 -07 000000447 INF: FPGA: Recv ZSGSRD 29299 17-03-18 06:48:03.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.544 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:48:03.544 -07 000000437 INF: FPGA: Recv ZPIEZORD 24812 17-03-18 06:48:03.554 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.554 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.285 V. Piezo Error = -9.9 V. 17-03-18 06:48:03.554 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29299 (-127.8 uncal um), Error = 0.8 uncal um, Median = 29300 (-127.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29289 (-127.7 uncal um), Max = 29304 (-127.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-18 06:48:03.554 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29299, posNoise = 5, negNoise = 10 17-03-18 06:48:03.554 -07 000000610 INF: Z Motor: After move to -0.128565, error = 0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:48:03.554 -07 000000610 INF: Z Motor: Settle wait time = 1456 ms, measure time = 154 ms (allowed 150 ms), total time = 1610 ms 17-03-18 06:48:03.554 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 154 ms, longer than max expected time of 150 ms 17-03-18 06:48:03.554 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1614 ms 17-03-18 06:48:03.554 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:48:03.554 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.1748046875, Z-position -0.128546343552589. ---------- 17-03-18 06:48:03.554 -07 000000610 INF: Cycle 153 Tile 17 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:48:03.554 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27908, sync = True, waitForSettling = True) 17-03-18 06:48:03.554 -07 000000610 INF: Z Motor: Moving to -0.127755 mm, started at -0.128546 mm, distance = 0.79 um 17-03-18 06:48:03.554 -07 000000610 INF: FPGA: Xmit ZDACW 27908\n [Z Motor] 17-03-18 06:48:03.554 -07 000000474 INF: FPGA: Recv ZDACW 17-03-18 06:48:03.564 -07 000000610 INF: FPGA: 'ZDACW 27908' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 06:48:03.564 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:48:03.564 -07 000000461 INF: FPGA: Recv ZDACR 27908 17-03-18 06:48:03.574 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.574 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:48:03.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.724 -07 000000447 INF: FPGA: Recv ZSGSRD 29177 17-03-18 06:48:03.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:48:03.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.734 -07 000000437 INF: FPGA: Recv ZSGSRD 29179 17-03-18 06:48:03.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.744 -07 000000480 INF: FPGA: Recv ZSGSRD 29181 17-03-18 06:48:03.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.754 -07 000000591 INF: FPGA: Recv ZSGSRD 29178 17-03-18 06:48:03.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.764 -07 000000480 INF: FPGA: Recv ZSGSRD 29182 17-03-18 06:48:03.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.774 -07 000000591 INF: FPGA: Recv ZSGSRD 29178 17-03-18 06:48:03.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.784 -07 000000480 INF: FPGA: Recv ZSGSRD 29168 17-03-18 06:48:03.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.794 -07 000000461 INF: FPGA: Recv ZSGSRD 29182 17-03-18 06:48:03.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.804 -07 000000462 INF: FPGA: Recv ZSGSRD 29176 17-03-18 06:48:03.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:03.814 -07 000000461 INF: FPGA: Recv ZSGSRD 29182 17-03-18 06:48:03.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.824 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:48:03.824 -07 000000480 INF: FPGA: Recv ZPIEZORD 24618 17-03-18 06:48:03.834 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:03.834 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.258 V. Piezo Error = -10.0 V. 17-03-18 06:48:03.834 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.8 um, Read 10 ADC samples: Avg = 29178 (-127.0 uncal um), Error = 0.8 uncal um, Median = 29178 (-127.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29168 (-126.9 uncal um), Max = 29182 (-127.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-18 06:48:03.834 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29178, posNoise = 4, negNoise = 10 17-03-18 06:48:03.834 -07 000000610 INF: Z Motor: After move to -0.127755, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:48:03.834 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 06:48:03.834 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:48:03.834 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:48:03.834 -07 000000437 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:48:03.834 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:48:03.834 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:48:03.834 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:48:03.834 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:48:03.834 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:48:03.834 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:48:03.834 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:48:03.834 -07 000000474 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 06:48:03.834 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:48:03.834 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:48:03.844 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:48:03.844 -07 000000474 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 06:48:03.844 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:48:03.854 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-18 06:48:03.854 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-18 06:48:03.854 -07 000000474 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-18 06:48:03.854 -07 000000474 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 06:48:03.854 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 28085 150\n [Camera] 17-03-18 06:48:04.054 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:48:04.524 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:48:04.524 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:48:04.524 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:48:04.524 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:48:04.524 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:48:04.524 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:48:04.524 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:48:04.524 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start. 17-03-18 06:48:04.534 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:48:04.534 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-18 06:48:04.714 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28085 851 17-03-18 06:48:04.864 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:48:04.904 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 374 ms. 17-03-18 06:48:04.904 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms. 17-03-18 06:48:04.904 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:04.904 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 371 ms. 17-03-18 06:48:04.904 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-18 06:48:04.904 -07 000000461 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:04.904 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:48:04.904 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 06:48:04.914 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:48:04.914 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 06:48:05.094 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:48:05.094 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:48:05.094 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:48:05.094 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:48:05.094 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:48:05.094 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:48:05.204 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:48:05.204 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start. 17-03-18 06:48:05.214 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:48:05.214 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:48:05.284 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:48:05.284 -07 000000625 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:48:05.284 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 28085 150' command took 2 ms to send, 1413 ms to get response, and 1424 ms overall 17-03-18 06:48:05.284 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 06:48:05.284 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 18 at Y-position 73.1748046875, Z-Position -0.127769013883436. ------ 17-03-18 06:48:05.284 -07 000000447 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:48:05.284 -07 000000474 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.13379 mm 17-03-18 06:48:05.284 -07 000000474 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:48:05.294 -07 000000591 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:48:05.294 -07 000000625 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True) 17-03-18 06:48:05.294 -07 000000447 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-18 06:48:05.294 -07 000000625 INF: Y Motor: Moving to 74.0226 mm, started at 73.1748 mm, delta = 0.8478 mm 17-03-18 06:48:05.294 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:48:05.294 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 29226, sync = True, waitForSettling = False) 17-03-18 06:48:05.294 -07 000000437 INF: Z Motor: Moving to -0.133788 mm, started at -0.127769 mm, distance = -6.02 um 17-03-18 06:48:05.294 -07 000000591 INF: FPGA: Recv YRDPOS 149862 17-03-18 06:48:05.304 -07 000000447 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 06:48:05.304 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:48:05.304 -07 000000625 INF: Y Motor: Encoder = 149862 = motor step 117079.7 = 73.1748 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:48:05.304 -07 000000625 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:48:05.304 -07 000000625 INF: Y Motor: Moving 1356 steps-36 17-03-18 06:48:05.314 -07 000000437 INF: FPGA: Xmit ZDACW 29226\n [Z Motor] 17-03-18 06:48:05.314 -07 000000461 INF: FPGA: Recv ZDACW 17-03-18 06:48:05.324 -07 000000625 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:48:05.324 -07 000000437 INF: FPGA: 'ZDACW 29226' command took 0 ms to send, 0 ms to get response, and 26 ms overall 17-03-18 06:48:05.334 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:48:05.334 -07 000000455 INF: FPGA: Recv ZDACR 29226 17-03-18 06:48:05.344 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 06:48:05.344 -07 000000437 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet)) 17-03-18 06:48:05.504 -07 000000487 INF: FPGA: Recv FOCMRRFOC 17-03-18 06:48:05.504 -07 000000447 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 212 ms overall 17-03-18 06:48:05.584 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 06:48:05.584 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 06:48:05.584 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:05.584 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 06:48:05.584 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-18 06:48:05.584 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:05.594 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:48:05.594 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 497 ms. 17-03-18 06:48:05.594 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:48:05.594 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 502 ms. 17-03-18 06:48:05.694 -07 000000447 INF: FPGA: Recv YMVTILE 17-03-18 06:48:05.694 -07 000000625 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 06:48:05.744 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:48:05.744 -07 000000455 INF: FPGA: Recv YRDPOS 151566 17-03-18 06:48:05.754 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:05.754 -07 000000625 INF: Y Motor: Encoder = 151566 = motor step 118410.9 = 74.0068 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:48:05.754 -07 000000625 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm) 17-03-18 06:48:05.754 -07 000000625 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.848 mm, average velocity = 2.136 mm/sec 17-03-18 06:48:06.704 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:48:06.704 -07 000000462 INF: FPGA: Recv YRDPOS 151566 17-03-18 06:48:06.714 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:48:06.714 -07 000000625 INF: Y Motor: Encoder = 151566 = motor step 118410.9 = 74.0068 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:48:06.734 -07 000000625 INF: Y Motor: After move to 74.022606, error = -0.015770, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:48:06.734 -07 000000625 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:48:06.734 -07 000000625 INF: Y Motor: Moved to 74.0068 after 1444 ms (table move) 17-03-18 06:48:06.734 -07 000000474 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133788 mm (DAC = 29226) 17-03-18 06:48:06.734 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:06.744 -07 000000625 INF: FPGA: Recv ZSGSRD 30119 17-03-18 06:48:06.744 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 06:48:06.744 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:06.744 -07 000000625 INF: FPGA: Recv ZSGSRD 30112 17-03-18 06:48:06.754 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 06:48:06.754 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:06.754 -07 000000625 INF: FPGA: Recv ZSGSRD 30113 17-03-18 06:48:06.764 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:06.764 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:06.764 -07 000000625 INF: FPGA: Recv ZSGSRD 30111 17-03-18 06:48:06.774 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:06.774 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:06.774 -07 000000625 INF: FPGA: Recv ZSGSRD 30117 17-03-18 06:48:06.784 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:06.784 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:06.784 -07 000000487 INF: FPGA: Recv ZSGSRD 30116 17-03-18 06:48:06.794 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:48:06.794 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:06.794 -07 000000455 INF: FPGA: Recv ZSGSRD 30116 17-03-18 06:48:06.804 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:06.804 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:06.804 -07 000000487 INF: FPGA: Recv ZSGSRD 30112 17-03-18 06:48:06.814 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:06.814 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:06.814 -07 000000512 INF: FPGA: Recv ZSGSRD 30114 17-03-18 06:48:06.824 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:06.824 -07 000000474 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:06.824 -07 000000512 INF: FPGA: Recv ZSGSRD 30119 17-03-18 06:48:06.834 -07 000000474 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:06.834 -07 000000474 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:48:06.834 -07 000000512 INF: FPGA: Recv ZPIEZORD 25885 17-03-18 06:48:06.844 -07 000000474 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:06.844 -07 000000474 INF: Z Motor: Piezo is near 35.3 V (nominally 0 to 100 V), expect near 44.6 V, since DAC is at 4.460 V. Piezo Error = -9.3 V. 17-03-18 06:48:06.844 -07 000000474 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.8 um, Read 10 ADC samples: Avg = 30115 (-133.0 uncal um), Error = 0.8 uncal um, Median = 30115 (-133.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 30111 (-133.0 uncal um), Max = 30119 (-133.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 06:48:06.844 -07 000000474 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30115, posNoise = 4, negNoise = 4 17-03-18 06:48:06.844 -07 000000474 INF: Z Motor: After move to -0.133788, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:48:06.844 -07 000000474 INF: Z Motor: Settle wait time = 1446 ms, measure time = 101 ms (allowed 150 ms), total time = 1547 ms 17-03-18 06:48:06.844 -07 000000474 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms 17-03-18 06:48:06.894 -07 000000474 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms 17-03-18 06:48:06.894 -07 000000474 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:48:06.894 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:48:06.894 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:48:06.894 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:48:06.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:48:06.894 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:48:06.894 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:48:06.894 -07 000000462 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 06:48:06.894 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:48:06.894 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:48:06.894 -07 000000462 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 06:48:06.904 -07 000000462 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 06:48:06.904 -07 000000462 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 06:48:06.914 -07 000000462 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-18 06:48:06.914 -07 000000462 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms. 17-03-18 06:48:06.914 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 06:48:06.964 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 06:48:07.264 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 06:48:07.264 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 06:48:07.264 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 06:48:07.264 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) start. 17-03-18 06:48:07.294 -07 000000474 INF: FPGA: Recv @CAMSNAP 380 17-03-18 06:48:07.304 -07 000000462 INF: FPGA: Recv CAMSNAP 17-03-18 06:48:07.304 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall 17-03-18 06:48:07.384 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2585563240, 0x0, 559484976) end. Duration was 123 ms. 17-03-18 06:48:07.384 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:07.384 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 06:48:07.384 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 125 ms. 17-03-18 06:48:07.404 -07 000000480 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 06:48:07.404 -07 000000625 INF: Autofocus start 17-03-18 06:48:07.404 -07 000000625 INF: MeasureProfile start 17-03-18 06:48:07.404 -07 000000455 INF: FPGA: Recv FOCMRRCUR 17-03-18 06:48:07.414 -07 000000480 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:48:07.414 -07 000000480 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 06:48:07.414 -07 000000625 INF: MeasureProfile done 17-03-18 06:48:07.414 -07 000000625 INF: X=-16 Z correction [um]=-0.08128808 17-03-18 06:48:07.414 -07 000000625 INF: Autofocus finished 17-03-18 06:48:07.614 -07 000000455 INF: FPGA: Recv FOCMRRIMG 17-03-18 06:48:07.614 -07 000000480 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 06:48:07.614 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0068359375, Z-position -0.133788500660266. ---------- 17-03-18 06:48:07.614 -07 000000610 INF: Cycle 153 Tile 18 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:48:07.624 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27721, sync = True, waitForSettling = True) 17-03-18 06:48:07.624 -07 000000610 INF: Z Motor: Moving to -0.126899 mm, started at -0.133789 mm, distance = 6.89 um 17-03-18 06:48:07.624 -07 000000610 INF: FPGA: Xmit ZDACW 27721\n [Z Motor] 17-03-18 06:48:07.624 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 06:48:07.634 -07 000000610 INF: FPGA: 'ZDACW 27721' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:48:07.634 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:48:07.634 -07 000000625 INF: FPGA: Recv ZDACR 27721 17-03-18 06:48:07.644 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:07.644 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:48:07.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:07.794 -07 000000591 INF: FPGA: Recv ZSGSRD 29040 17-03-18 06:48:07.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:48:07.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:07.804 -07 000000462 INF: FPGA: Recv ZSGSRD 29039 17-03-18 06:48:07.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:07.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:07.814 -07 000000512 INF: FPGA: Recv ZSGSRD 29039 17-03-18 06:48:07.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:07.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:07.824 -07 000000462 INF: FPGA: Recv ZSGSRD 29041 17-03-18 06:48:07.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:07.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:07.834 -07 000000591 INF: FPGA: Recv ZSGSRD 29041 17-03-18 06:48:07.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:07.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:07.844 -07 000000462 INF: FPGA: Recv ZSGSRD 29039 17-03-18 06:48:07.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:07.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:07.854 -07 000000512 INF: FPGA: Recv ZSGSRD 29044 17-03-18 06:48:07.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:07.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:07.864 -07 000000462 INF: FPGA: Recv ZSGSRD 29041 17-03-18 06:48:07.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:07.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:07.874 -07 000000474 INF: FPGA: Recv ZSGSRD 29044 17-03-18 06:48:07.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:07.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:07.884 -07 000000512 INF: FPGA: Recv ZSGSRD 29045 17-03-18 06:48:07.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:07.894 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:48:07.894 -07 000000625 INF: FPGA: Recv ZPIEZORD 24466 17-03-18 06:48:07.904 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:07.904 -07 000000610 INF: Z Motor: Piezo is near 32.3 V (nominally 0 to 100 V), expect near 42.3 V, since DAC is at 4.230 V. Piezo Error = -10.0 V. 17-03-18 06:48:07.904 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.9 um, Read 10 ADC samples: Avg = 29041 (-126.1 uncal um), Error = 0.8 uncal um, Median = 29041 (-126.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 29039 (-126.1 uncal um), Max = 29045 (-126.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um) 17-03-18 06:48:07.904 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29041, posNoise = 4, negNoise = 2 17-03-18 06:48:07.904 -07 000000610 INF: Z Motor: After move to -0.126899, error = 0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:48:07.904 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-18 06:48:07.904 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:48:07.904 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:48:07.904 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:48:07.904 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:48:07.904 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:48:07.904 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:48:07.904 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:48:07.904 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:48:07.904 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 06:48:07.904 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:48:07.904 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 06:48:07.904 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:48:07.914 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 06:48:07.914 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:48:07.914 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:48:07.914 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:48:07.914 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 06:48:07.914 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 06:48:07.924 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 06:48:07.924 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 06:48:07.924 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 27898 150\n [Camera] 17-03-18 06:48:08.124 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning red on 195 17-03-18 06:48:08.464 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.011254, 17-03-18 06:48:08.584 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:48:08.584 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:48:08.594 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:48:08.594 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:48:08.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:48:08.594 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:48:08.594 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:48:08.594 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start. 17-03-18 06:48:08.594 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:48:08.594 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start. 17-03-18 06:48:08.784 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27898 851 17-03-18 06:48:08.934 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:48:08.964 -07 000000625 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 368 ms. 17-03-18 06:48:08.964 -07 000000625 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms. 17-03-18 06:48:08.964 -07 000000625 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:08.974 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 374 ms. 17-03-18 06:48:08.974 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms. 17-03-18 06:48:08.974 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:08.974 -07 000000625 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:48:08.974 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:48:08.974 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 06:48:08.984 -07 000000625 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms. 17-03-18 06:48:09.154 -07 000000474 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:48:09.154 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:48:09.154 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:48:09.154 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:48:09.154 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:48:09.164 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:48:09.164 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:48:09.164 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start. 17-03-18 06:48:09.164 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:48:09.164 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-18 06:48:09.344 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP 1417 17-03-18 06:48:09.344 -07 000000625 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:48:09.344 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 27898 150' command took 2 ms to send, 1418 ms to get response, and 1424 ms overall 17-03-18 06:48:09.344 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.127274 17-03-18 06:48:09.354 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12727 mm 17-03-18 06:48:09.354 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 06:48:09.354 -07 000000625 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True) 17-03-18 06:48:09.354 -07 000000625 INF: Y Motor: Moving to 74.8526 mm, started at 74.0068 mm, delta = 0.8458 mm 17-03-18 06:48:09.354 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:48:09.354 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 27803, sync = True, waitForSettling = False) 17-03-18 06:48:09.354 -07 000000455 INF: Z Motor: Moving to -0.127274 mm, started at -0.126889 mm, distance = -0.39 um 17-03-18 06:48:09.364 -07 000000455 INF: FPGA: Xmit ZDACW 27803\n [Z Motor] 17-03-18 06:48:09.544 -07 000000474 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 380 ms. 17-03-18 06:48:09.544 -07 000000474 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-18 06:48:09.544 -07 000000474 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:09.544 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 381 ms. 17-03-18 06:48:09.544 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 06:48:09.544 -07 000000590 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:09.664 -07 000000474 INF: Camera: CopyActivePixFullImage end. Duration was 117 ms. 17-03-18 06:48:09.664 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 117 ms. 17-03-18 06:48:09.664 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 507 ms. 17-03-18 06:48:09.674 -07 000000474 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 510 ms. 17-03-18 06:48:09.674 -07 000000590 INF: FPGA: Recv YRDPOS 151567 17-03-18 06:48:09.674 -07 000000590 INF: FPGA: Recv ZDACW 17-03-18 06:48:09.674 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 314 ms to get response, and 321 ms overall 17-03-18 06:48:09.674 -07 000000625 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:48:09.674 -07 000000455 INF: FPGA: 'ZDACW 27803' command took 0 ms to send, 304 ms to get response, and 320 ms overall 17-03-18 06:48:09.674 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:48:09.674 -07 000000590 INF: FPGA: Recv ZDACR 27803 17-03-18 06:48:09.674 -07 000000625 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 06:48:09.674 -07 000000625 INF: Y Motor: Moving 1352 steps-32 17-03-18 06:48:09.684 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:48:09.684 -07 000000625 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 06:48:09.684 -07 000000455 INF: Z Motor: MoveAbsStepped took 326 ms (did NOT wait for settling yet)) 17-03-18 06:48:10.054 -07 000000474 INF: FPGA: Recv YMVTILE 17-03-18 06:48:10.054 -07 000000625 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 379 ms overall 17-03-18 06:48:10.094 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:48:10.094 -07 000000590 INF: FPGA: Recv YRDPOS 153253 17-03-18 06:48:10.104 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 06:48:10.104 -07 000000625 INF: Y Motor: Encoder = 153253 = motor step 119728.9 = 74.8306 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:48:10.104 -07 000000625 INF: Y Motor: Position error before settling (table move) = -45 encoder counts (-0.022 mm) 17-03-18 06:48:10.104 -07 000000625 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 379 ms, distance = 0.846 mm, average velocity = 2.232 mm/sec 17-03-18 06:48:11.054 -07 000000625 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 06:48:11.054 -07 000000455 INF: FPGA: Recv YRDPOS 153253 17-03-18 06:48:11.064 -07 000000625 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:48:11.064 -07 000000625 INF: Y Motor: Encoder = 153253 = motor step 119728.9 = 74.8306 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 06:48:11.084 -07 000000625 INF: Y Motor: After move to 74.852608, error = -0.022041, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 06:48:11.084 -07 000000625 INF: Y Motor: Position error after settling (table move) = -45 encoder counts (-0.022 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 06:48:11.084 -07 000000625 INF: Y Motor: Moved to 74.8306 after 1729 ms (table move) 17-03-18 06:48:11.084 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.127274 mm (DAC = 27803) 17-03-18 06:48:11.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.084 -07 000000590 INF: FPGA: Recv ZSGSRD 29100 17-03-18 06:48:11.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 06:48:11.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.094 -07 000000626 INF: FPGA: Recv ZSGSRD 29102 17-03-18 06:48:11.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.104 -07 000000590 INF: FPGA: Recv ZSGSRD 29097 17-03-18 06:48:11.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.114 -07 000000561 INF: FPGA: Recv ZSGSRD 29103 17-03-18 06:48:11.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.124 -07 000000590 INF: FPGA: Recv ZSGSRD 29101 17-03-18 06:48:11.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.134 -07 000000561 INF: FPGA: Recv ZSGSRD 29107 17-03-18 06:48:11.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.144 -07 000000590 INF: FPGA: Recv ZSGSRD 29101 17-03-18 06:48:11.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.154 -07 000000626 INF: FPGA: Recv ZSGSRD 29099 17-03-18 06:48:11.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.164 -07 000000590 INF: FPGA: Recv ZSGSRD 29102 17-03-18 06:48:11.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.174 -07 000000625 INF: FPGA: Recv ZSGSRD 29096 17-03-18 06:48:11.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.184 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:48:11.184 -07 000000581 INF: FPGA: Recv ZPIEZORD 24613 17-03-18 06:48:11.194 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.194 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.4 V, since DAC is at 4.242 V. Piezo Error = -9.8 V. 17-03-18 06:48:11.194 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.3 um, Read 10 ADC samples: Avg = 29101 (-126.5 uncal um), Error = 0.8 uncal um, Median = 29101 (-126.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29096 (-126.5 uncal um), Max = 29107 (-126.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 06:48:11.194 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29101, posNoise = 6, negNoise = 5 17-03-18 06:48:11.194 -07 000000610 INF: Z Motor: After move to -0.127274, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:48:11.194 -07 000000610 INF: Z Motor: Settle wait time = 1731 ms, measure time = 105 ms (allowed 150 ms), total time = 1836 ms 17-03-18 06:48:11.194 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-18 06:48:11.244 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1889 ms 17-03-18 06:48:11.244 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 06:48:11.244 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83056640625, Z-position -0.127274349548521. ---------- 17-03-18 06:48:11.244 -07 000000610 INF: Cycle 153 Tile 19 Exposure Settings A 466 G 224 T 224 C 466 17-03-18 06:48:11.244 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27626, sync = True, waitForSettling = True) 17-03-18 06:48:11.244 -07 000000610 INF: Z Motor: Moving to -0.126464 mm, started at -0.127274 mm, distance = 0.81 um 17-03-18 06:48:11.244 -07 000000610 INF: FPGA: Xmit ZDACW 27626\n [Z Motor] 17-03-18 06:48:11.244 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 06:48:11.254 -07 000000610 INF: FPGA: 'ZDACW 27626' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 06:48:11.254 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 06:48:11.254 -07 000000455 INF: FPGA: Recv ZDACR 27626 17-03-18 06:48:11.264 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.264 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 06:48:11.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.414 -07 000000474 INF: FPGA: Recv ZSGSRD 28981 17-03-18 06:48:11.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 06:48:11.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.424 -07 000000626 INF: FPGA: Recv ZSGSRD 28978 17-03-18 06:48:11.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.434 -07 000000561 INF: FPGA: Recv ZSGSRD 28977 17-03-18 06:48:11.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.444 -07 000000626 INF: FPGA: Recv ZSGSRD 28974 17-03-18 06:48:11.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.454 -07 000000561 INF: FPGA: Recv ZSGSRD 28982 17-03-18 06:48:11.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.464 -07 000000581 INF: FPGA: Recv ZSGSRD 28983 17-03-18 06:48:11.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.474 -07 000000474 INF: FPGA: Recv ZSGSRD 28975 17-03-18 06:48:11.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.484 -07 000000455 INF: FPGA: Recv ZSGSRD 28970 17-03-18 06:48:11.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.494 -07 000000561 INF: FPGA: Recv ZSGSRD 28971 17-03-18 06:48:11.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 06:48:11.504 -07 000000474 INF: FPGA: Recv ZSGSRD 28980 17-03-18 06:48:11.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.514 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 06:48:11.514 -07 000000455 INF: FPGA: Recv ZPIEZORD 24419 17-03-18 06:48:11.524 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 06:48:11.524 -07 000000610 INF: Z Motor: Piezo is near 32.2 V (nominally 0 to 100 V), expect near 42.2 V, since DAC is at 4.215 V. Piezo Error = -10.0 V. 17-03-18 06:48:11.524 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.5 um, Read 10 ADC samples: Avg = 28977 (-125.7 uncal um), Error = 0.8 uncal um, Median = 28978 (-125.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 28970 (-125.7 uncal um), Max = 28983 (-125.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 06:48:11.524 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 28977, posNoise = 6, negNoise = 7 17-03-18 06:48:11.524 -07 000000610 INF: Z Motor: After move to -0.126464, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 06:48:11.524 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 06:48:11.524 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 06:48:11.524 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 06:48:11.524 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 06:48:11.524 -07 000000581 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 06:48:11.524 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 06:48:11.524 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 06:48:11.524 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 06:48:11.524 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 06:48:11.524 -07 000000581 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 06:48:11.524 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 06:48:11.524 -07 000000625 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-18 06:48:11.524 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 06:48:11.534 -07 000000625 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 06:48:11.534 -07 000000581 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 06:48:11.534 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 06:48:11.534 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 06:48:11.544 -07 000000625 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms. 17-03-18 06:48:11.544 -07 000000625 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 06:48:11.544 -07 000000581 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 11 ms. 17-03-18 06:48:11.544 -07 000000581 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 06:48:11.544 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 466 466 224 224 27803 150\n [Camera] 17-03-18 06:48:11.744 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 06:48:11.894 -07 000000474 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 06:48:11.894 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 152. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=2003, R2=2087, Total=4090. Warn if over 250 bubbles per interval. 17-03-18 06:48:12.214 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658 17-03-18 06:48:12.214 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658 17-03-18 06:48:12.214 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:48:12.214 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658 17-03-18 06:48:12.214 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658 17-03-18 06:48:12.214 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:48:12.214 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:48:12.214 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-18 06:48:12.224 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:48:12.224 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 06:48:12.404 -07 000000625 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27803 851 17-03-18 06:48:12.554 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1001 17-03-18 06:48:12.594 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 370 ms. 17-03-18 06:48:12.594 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 374 ms. 17-03-18 06:48:12.594 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms. 17-03-18 06:48:12.594 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:12.594 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms. 17-03-18 06:48:12.594 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:12.594 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:48:12.594 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 06:48:12.594 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 06:48:12.604 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-18 06:48:12.774 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1225 17-03-18 06:48:12.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1225 17-03-18 06:48:12.774 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 06:48:12.784 -07 000000581 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1225 17-03-18 06:48:12.784 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1225 17-03-18 06:48:12.784 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 06:48:12.784 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 06:48:12.784 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start. 17-03-18 06:48:12.784 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 06:48:12.784 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start. 17-03-18 06:48:12.964 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1418 17-03-18 06:48:12.964 -07 000000625 INF: FPGA: Recv CAMDBLSNAP 17-03-18 06:48:12.964 -07 000000610 INF: FPGA: 'CAMDBLSNAP 466 466 224 224 27803 150' command took 2 ms to send, 1419 ms to get response, and 1424 ms overall 17-03-18 06:48:13.184 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 399 ms. 17-03-18 06:48:13.184 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-18 06:48:13.184 -07 000000455 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:13.184 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 398 ms. 17-03-18 06:48:13.184 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-18 06:48:13.184 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 06:48:13.184 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 06:48:13.184 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms. 17-03-18 06:48:13.184 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start. 17-03-18 06:48:13.184 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 06:48:13.194 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms. 17-03-18 06:48:13.234 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms. 17-03-18 06:48:13.234 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start. 17-03-18 06:48:13.274 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms. 17-03-18 06:48:13.284 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles. 17-03-18 06:48:13.284 -07 000000610 INF: Imaging Cycle 153: ScanTilesCommand Cycle 153 time end. Duration was 149122 ms. 17-03-18 06:48:13.284 -07 000000610 INF: =================== Cycle #153 =================== 17-03-18 06:48:13.284 -07 000000610 INF: =================== =================== 17-03-18 06:48:13.284 -07 000000561 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED] 17-03-18 06:48:13.284 -07 000000455 INF: FPGA: Recv EXLED1ADCR 23 17-03-18 06:48:13.294 -07 000000561 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 06:48:13.294 -07 000000561 INF: GreenLED: Using Green data: Photodiode ADC 23 --> 0.0 mW (old method), or 1.7 mW (new method). Difference = 1.6 mW 17-03-18 06:48:13.294 -07 000000561 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 153, FrontChillerTemperature: 4.011254, FrontChillerHeatSinkTemperature: 0.617698, AmbientTemperature: 18.72098, FlowCellCompartmentTemperature: 21.98965, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.59168, GreenLEDSensorTemperature: 25.94754, PhotodiodePowerAdcGreen: 23, PhotodiodePowerMwGreen: 1.653493 17-03-18 06:48:13.414 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.