17-03-17 19:06:20.048 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:06:20.048 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True) 17-03-17 19:06:20.048 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8325 mm, delta = 0.5481 mm 17-03-17 19:06:20.048 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:06:20.058 -07 000000593 INF: FPGA: Recv YRDPOS 153258 17-03-17 19:06:20.058 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 4 ms to get response, and 5 ms overall 17-03-17 19:06:20.058 -07 000000610 INF: Y Motor: Encoder = 153258 = motor step 119732.8 = 74.8330 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:06:20.058 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False 17-03-17 19:06:20.058 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts 17-03-17 19:06:20.058 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor] 17-03-17 19:06:20.178 -07 000000623 INF: FPGA: Recv YMVTO 154377 871 17-03-17 19:06:20.178 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 113 ms to get response, and 116 ms overall 17-03-17 19:06:20.178 -07 000000610 INF: Y Motor: Position error before settling = -2 encoder counts (-0.001 mm) 17-03-17 19:06:20.178 -07 000000610 INF: Y Motor: To move from 74.833 to 75.381 (0.548 mm) should take 876 steps, but required 871 steps (0.544 mm). Slippage = -0.003 mm (-0.01%). 17-03-17 19:06:20.178 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 116 ms, distance = 0.548 mm, average velocity = 4.725 mm/sec 17-03-17 19:06:20.718 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.962185, 17-03-17 19:06:21.658 -07 000000415 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:06:21.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=235, R2=255, Total=490. Warn if over 250 bubbles per interval. 17-03-17 19:06:23.178 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:06:23.178 -07 000000415 INF: FPGA: Recv YRDPOS 154380 17-03-17 19:06:23.188 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:06:23.188 -07 000000610 INF: Y Motor: Encoder = 154380 = motor step 120609.4 = 75.3809 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:06:23.198 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.000279, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:06:23.198 -07 000000610 INF: Y Motor: Position error after settling = 1 encoder counts (0.000 mm), Delta during settling = 3 counts (0.001 mm) 17-03-17 19:06:23.198 -07 000000610 INF: Y Motor: Moved to 75.3809 after 3147 ms 17-03-17 19:06:23.208 -07 000000610 INF: =================== Cycle #22, Flow Cell Temp 60° =================== 17-03-17 19:06:23.208 -07 000000610 INF: =================== Cycle #22, Flow Cell Temp 60°, FC temperature to 60° =================== 17-03-17 19:06:23.208 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl] 17-03-17 19:06:23.208 -07 000000551 INF: FPGA: Recv TEC2TEMP 17-03-17 19:06:23.218 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:06:23.218 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-17 19:06:23.218 -07 000000438 INF: FPGA: Recv TEC2EN 17-03-17 19:06:23.228 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:06:23.228 -07 000000610 INF: =================== Cycle #22, Flow Cell Temp 60° =================== 17-03-17 19:06:23.228 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:06:23.228 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-17 19:06:23.228 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:06:23.258 -07 000000610 INF: ReagentValve: Recv 18\r 17-03-17 19:06:23.258 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions. 17-03-17 19:06:23.258 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-17 19:06:23.558 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-17 19:06:23.578 -07 000000610 INF: ReagentValve: Recv 0278\r 17-03-17 19:06:23.578 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%) 17-03-17 19:06:23.628 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:06:23.648 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-17 19:06:23.648 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-17 19:06:23.748 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:06:23.748 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1 17-03-17 19:06:23.748 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:23.778 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-17 19:06:23.778 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-17 19:06:23.778 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-17 19:06:23.908 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r 17-03-17 19:06:23.948 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:26.098 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.962185, 17-03-17 19:06:26.658 -07 000000415 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:06:26.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=235, R2=255, Total=490. Warn if over 250 bubbles per interval. 17-03-17 19:06:27.078 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:27.108 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:27.528 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:27.558 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:27.978 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:28.008 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:28.008 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete 17-03-17 19:06:28.008 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:06:28.138 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:28.168 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-17 19:06:28.168 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-17 19:06:28.298 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:28.328 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-17 19:06:28.328 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-17 19:06:28.328 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-17 19:06:28.458 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-17 19:06:28.488 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:28.918 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:28.948 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:28.948 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-17 19:06:28.948 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:06:30.168 -07 000000610 INF: AsyncDelayTimer waited 1219ms 17-03-17 19:06:30.168 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start 17-03-17 19:06:30.168 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:06:30.188 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-17 19:06:30.188 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions. 17-03-17 19:06:30.188 -07 000000610 INF: ReagentValve: Xmit +04\r 17-03-17 19:06:30.318 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-17 19:06:30.338 -07 000000610 INF: ReagentValve: Recv 00CD\r 17-03-17 19:06:30.338 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%) 17-03-17 19:06:30.388 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:06:30.408 -07 000000610 INF: ReagentValve: Recv 04\r 17-03-17 19:06:30.408 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-17 19:06:30.508 -07 000000610 INF: =================== Cycle #22, Pumping Reagent CMS (4) =================== 17-03-17 19:06:30.508 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-17 19:06:30.508 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:30.538 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-17 19:06:30.538 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-17 19:06:30.538 -07 000000610 INF: =================== Cycle #22, Pumping Reagent CMS (4), Aspirating port InputPort =================== 17-03-17 19:06:30.668 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-17 19:06:30.708 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:31.458 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.005817, 17-03-17 19:06:31.658 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1 17-03-17 19:06:31.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=236, R2=256, Total=492. Warn if over 250 bubbles per interval. 17-03-17 19:06:32.148 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:32.178 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:32.598 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:32.628 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:32.628 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete 17-03-17 19:06:32.628 -07 000000610 INF: =================== Cycle #22, Pumping Reagent CMS (4) =================== 17-03-17 19:06:32.758 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:32.788 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-17 19:06:32.788 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-17 19:06:32.918 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:32.948 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-17 19:06:32.948 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-17 19:06:32.948 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-17 19:06:33.078 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-17 19:06:33.108 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:33.538 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:33.568 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:33.568 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-17 19:06:33.568 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:06:34.788 -07 000000610 INF: AsyncDelayTimer waited 1219ms 17-03-17 19:06:34.788 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-17 19:06:34.788 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:06:34.808 -07 000000610 INF: ReagentValve: Recv 04\r 17-03-17 19:06:34.808 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions. 17-03-17 19:06:34.808 -07 000000610 INF: ReagentValve: Xmit -03\r 17-03-17 19:06:34.958 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-17 19:06:34.978 -07 000000610 INF: ReagentValve: Recv 00E1\r 17-03-17 19:06:34.978 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%) 17-03-17 19:06:35.028 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:06:35.048 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-17 19:06:35.048 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-17 19:06:35.148 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:06:35.148 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-17 19:06:35.148 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:35.178 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-17 19:06:35.178 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-17 19:06:35.178 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-17 19:06:35.308 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-17 19:06:35.348 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:36.218 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:36.248 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:36.248 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete 17-03-17 19:06:36.248 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:06:36.378 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:36.408 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-17 19:06:36.408 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-17 19:06:36.538 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:36.568 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-17 19:06:36.568 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-17 19:06:36.568 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-17 19:06:36.658 -07 000000433 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 3 R1 7 17-03-17 19:06:36.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=7, R2=3, Total=10. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=243, R2=259, Total=502. Warn if over 250 bubbles per interval. 17-03-17 19:06:36.698 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-17 19:06:36.728 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:36.828 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.038479, 17-03-17 19:06:37.158 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:37.188 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:37.188 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-17 19:06:37.188 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:06:37.188 -07 000000433 INF: =================== Dispense to DispenseAndWait =================== 17-03-17 19:06:37.188 -07 000000433 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-17 19:06:37.948 -07 000000502 INF: WaitCommand(10000) start 17-03-17 19:06:38.408 -07 000000433 INF: AsyncDelayTimer waited 1217ms 17-03-17 19:06:38.408 -07 000000433 INF: LanePump: Xmit /1?\r 17-03-17 19:06:38.498 -07 000000433 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-17 19:06:38.498 -07 000000433 INF: LanePump: Current Position of Pump is: 1110 17-03-17 19:06:38.628 -07 000000433 INF: LanePump: Xmit /1V1500OA0R\r 17-03-17 19:06:38.668 -07 000000433 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:40.198 -07 000000433 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:40.228 -07 000000433 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:40.648 -07 000000433 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:40.678 -07 000000433 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:40.678 -07 000000433 INF: LanePump: Waited 2009 ms for pump motion to complete 17-03-17 19:06:40.678 -07 000000433 INF: =================== Dispense to DispenseAndWait =================== 17-03-17 19:06:40.678 -07 000000433 INF: =================== =================== 17-03-17 19:06:41.658 -07 000000623 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:06:41.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=243, R2=259, Total=502. Warn if over 250 bubbles per interval. 17-03-17 19:06:42.198 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.003063, 17-03-17 19:06:46.658 -07 000000433 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:06:46.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=243, R2=259, Total=502. Warn if over 250 bubbles per interval. 17-03-17 19:06:47.568 -07 000000623 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.008536, 17-03-17 19:06:47.958 -07 000000502 INF: WaitCommand(10000) end 17-03-17 19:06:47.958 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:06:47.958 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1 17-03-17 19:06:47.958 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:47.988 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-17 19:06:47.988 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-17 19:06:47.988 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-17 19:06:48.118 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r 17-03-17 19:06:48.158 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:51.658 -07 000000433 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:06:51.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=243, R2=259, Total=502. Warn if over 250 bubbles per interval. 17-03-17 19:06:52.938 -07 000000623 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.043918, 17-03-17 19:06:54.288 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:54.318 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:54.738 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:54.768 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:55.188 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:55.218 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:55.638 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:55.668 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:06:56.088 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:56.118 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:56.118 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete 17-03-17 19:06:56.118 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:06:56.248 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:56.278 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-17 19:06:56.278 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-17 19:06:56.408 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:56.438 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-17 19:06:56.438 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-17 19:06:56.438 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-17 19:06:56.568 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-17 19:06:56.598 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:56.658 -07 000000623 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 3 R1 9 17-03-17 19:06:56.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=9, R2=3, Total=12. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=252, R2=262, Total=514. Warn if over 250 bubbles per interval. 17-03-17 19:06:57.028 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:06:57.058 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:06:57.058 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-17 19:06:57.058 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:06:58.278 -07 000000610 INF: AsyncDelayTimer waited 1217ms 17-03-17 19:06:58.278 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start 17-03-17 19:06:58.278 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:06:58.298 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-17 19:06:58.298 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions. 17-03-17 19:06:58.298 -07 000000610 INF: ReagentValve: Xmit -01\r 17-03-17 19:06:58.308 -07 000000541 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.020806, 17-03-17 19:06:58.508 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-17 19:06:58.528 -07 000000610 INF: ReagentValve: Recv 0198\r 17-03-17 19:06:58.528 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%) 17-03-17 19:06:58.578 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:06:58.598 -07 000000610 INF: ReagentValve: Recv 01\r 17-03-17 19:06:58.598 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-17 19:06:58.698 -07 000000610 INF: =================== Cycle #22, Pumping Reagent IMT (1) =================== 17-03-17 19:06:58.698 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-17 19:06:58.698 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:06:58.728 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-17 19:06:58.728 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-17 19:06:58.728 -07 000000610 INF: =================== Cycle #22, Pumping Reagent IMT (1), Aspirating port InputPort =================== 17-03-17 19:06:58.858 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-17 19:06:58.898 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:07:00.338 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:07:00.368 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:07:00.788 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:07:00.818 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:07:00.818 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete 17-03-17 19:07:00.818 -07 000000610 INF: =================== Cycle #22, Pumping Reagent IMT (1) =================== 17-03-17 19:07:00.948 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:07:00.978 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-17 19:07:00.978 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-17 19:07:01.108 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:07:01.138 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-17 19:07:01.138 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-17 19:07:01.138 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-17 19:07:01.268 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-17 19:07:01.298 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:07:01.658 -07 000000433 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 9 R1 3 17-03-17 19:07:01.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=3, R2=9, Total=12. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:01.728 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:07:01.758 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:07:01.758 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-17 19:07:01.758 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:07:02.978 -07 000000610 INF: AsyncDelayTimer waited 1216ms 17-03-17 19:07:02.978 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-17 19:07:02.978 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:07:02.998 -07 000000610 INF: ReagentValve: Recv 01\r 17-03-17 19:07:02.998 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions. 17-03-17 19:07:02.998 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-17 19:07:03.228 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-17 19:07:03.248 -07 000000610 INF: ReagentValve: Recv 01AC\r 17-03-17 19:07:03.248 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%) 17-03-17 19:07:03.298 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:07:03.318 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-17 19:07:03.318 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-17 19:07:03.418 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:07:03.418 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-17 19:07:03.418 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:07:03.448 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-17 19:07:03.448 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-17 19:07:03.448 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-17 19:07:03.578 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-17 19:07:03.618 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:07:03.678 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.031682, 17-03-17 19:07:04.488 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:07:04.518 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:07:04.518 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete 17-03-17 19:07:04.518 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:07:04.648 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:07:04.678 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-17 19:07:04.678 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-17 19:07:04.808 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:07:04.838 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-17 19:07:04.838 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-17 19:07:04.838 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-17 19:07:04.968 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-17 19:07:04.998 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:07:05.428 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:07:05.458 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:07:05.458 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-17 19:07:05.458 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:07:05.458 -07 000000610 INF: =================== Cycle #22, Flow Cell Temp 65° =================== 17-03-17 19:07:05.458 -07 000000610 INF: =================== Cycle #22, Flow Cell Temp 65°, FC temperature to 65° =================== 17-03-17 19:07:05.458 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl] 17-03-17 19:07:05.458 -07 000000438 INF: FPGA: Recv TEC2TEMP 17-03-17 19:07:05.468 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:07:05.468 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-17 19:07:05.468 -07 000000561 INF: FPGA: Recv TEC2EN 17-03-17 19:07:05.478 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:07:05.478 -07 000000610 INF: =================== Cycle #22, Flow Cell Temp 65° =================== 17-03-17 19:07:05.478 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:07:05.478 -07 000000610 INF: WaitCommand(30000) start 17-03-17 19:07:06.658 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:07:06.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:09.048 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.016692, 17-03-17 19:07:11.658 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:07:11.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:14.418 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.966297, 17-03-17 19:07:16.658 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:07:16.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:20.708 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.963579, 17-03-17 19:07:21.658 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:07:21.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:26.078 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.990831, 17-03-17 19:07:26.658 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:07:26.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:31.458 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.974486, 17-03-17 19:07:31.658 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:07:31.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:35.488 -07 000000610 INF: WaitCommand(30000) end 17-03-17 19:07:35.488 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:07:35.488 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1 17-03-17 19:07:35.588 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:07:35.618 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-17 19:07:35.618 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-17 19:07:35.618 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-17 19:07:35.748 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r 17-03-17 19:07:35.788 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:07:36.328 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:07:36.358 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:07:36.358 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete 17-03-17 19:07:36.358 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:07:36.488 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:07:36.518 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-17 19:07:36.518 -07 000000610 INF: LanePump: Current Position of Pump is: 1920 17-03-17 19:07:36.648 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:07:36.658 -07 000000593 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:07:36.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:36.678 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-17 19:07:36.678 -07 000000610 INF: LanePump: Current Position of Pump is: 1920 17-03-17 19:07:36.678 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-17 19:07:36.808 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-17 19:07:36.818 -07 000000593 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.024884, 17-03-17 19:07:36.838 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:07:37.268 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:07:37.298 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:07:37.298 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-17 19:07:37.298 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:07:37.298 -07 000000462 INF: WaitCommand(30000) start 17-03-17 19:07:37.298 -07 000000502 INF: =================== Dispense to DispenseAndWait =================== 17-03-17 19:07:37.298 -07 000000502 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-17 19:07:38.518 -07 000000502 INF: AsyncDelayTimer waited 1216ms 17-03-17 19:07:38.518 -07 000000502 INF: LanePump: Xmit /1?\r 17-03-17 19:07:38.548 -07 000000502 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-17 19:07:38.548 -07 000000502 INF: LanePump: Current Position of Pump is: 1920 17-03-17 19:07:38.678 -07 000000502 INF: LanePump: Xmit /1V1500OA0R\r 17-03-17 19:07:38.718 -07 000000502 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:07:41.058 -07 000000502 INF: LanePump: Xmit /1Q\r 17-03-17 19:07:41.088 -07 000000502 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:07:41.508 -07 000000502 INF: LanePump: Xmit /1Q\r 17-03-17 19:07:41.538 -07 000000502 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:07:41.538 -07 000000502 INF: LanePump: Waited 2819 ms for pump motion to complete 17-03-17 19:07:41.538 -07 000000502 INF: =================== Dispense to DispenseAndWait =================== 17-03-17 19:07:41.538 -07 000000502 INF: =================== =================== 17-03-17 19:07:41.658 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:07:41.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:42.188 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.004458, 17-03-17 19:07:46.658 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:07:46.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:47.558 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.996267, 17-03-17 19:07:51.658 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:07:51.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:53.618 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.024884, 17-03-17 19:07:56.658 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:07:56.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:07:59.248 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.001704, 17-03-17 19:08:01.658 -07 000000593 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:08:01.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:08:04.618 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.994908, 17-03-17 19:08:06.658 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:08:06.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:08:07.308 -07 000000462 INF: WaitCommand(30000) end 17-03-17 19:08:07.308 -07 000000610 INF: =================== Cycle #22, Flow Cell Temp 22° =================== 17-03-17 19:08:07.308 -07 000000610 INF: =================== Cycle #22, Flow Cell Temp 22°, FC temperature to 22° =================== 17-03-17 19:08:07.308 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl] 17-03-17 19:08:07.318 -07 000000561 INF: FPGA: Recv TEC2TEMP 17-03-17 19:08:07.318 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:08:07.318 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-17 19:08:07.318 -07 000000502 INF: FPGA: Recv TEC2EN 17-03-17 19:08:07.328 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:08:07.328 -07 000000610 INF: =================== Cycle #22, Flow Cell Temp 22° =================== 17-03-17 19:08:07.328 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:08:07.328 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:08:07.328 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1 17-03-17 19:08:07.328 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:08:07.358 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-17 19:08:07.358 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-17 19:08:07.358 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-17 19:08:07.488 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r 17-03-17 19:08:07.528 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:08:10.658 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:08:10.668 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.997626, 17-03-17 19:08:10.688 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:08:11.108 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:08:11.138 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:08:11.558 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:08:11.588 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:08:11.588 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete 17-03-17 19:08:11.588 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:08:11.658 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:08:11.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=271, Total=526. Warn if over 250 bubbles per interval. 17-03-17 19:08:11.718 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:08:11.748 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-17 19:08:11.748 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-17 19:08:11.878 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:08:11.908 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-17 19:08:11.908 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-17 19:08:11.908 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-17 19:08:12.038 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-17 19:08:12.068 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:08:12.498 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:08:12.528 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:08:12.528 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-17 19:08:12.528 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:08:13.748 -07 000000610 INF: AsyncDelayTimer waited 1219ms 17-03-17 19:08:13.748 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start 17-03-17 19:08:13.748 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:08:13.768 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-17 19:08:13.768 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions. 17-03-17 19:08:13.768 -07 000000610 INF: ReagentValve: Xmit -02\r 17-03-17 19:08:13.918 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-17 19:08:13.938 -07 000000610 INF: ReagentValve: Recv 00E3\r 17-03-17 19:08:13.938 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%) 17-03-17 19:08:13.988 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:08:14.008 -07 000000610 INF: ReagentValve: Recv 02\r 17-03-17 19:08:14.008 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-17 19:08:14.108 -07 000000610 INF: =================== Cycle #22, Pumping Reagent USM (2) =================== 17-03-17 19:08:14.108 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-17 19:08:14.108 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:08:14.138 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-17 19:08:14.138 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-17 19:08:14.138 -07 000000610 INF: =================== Cycle #22, Pumping Reagent USM (2), Aspirating port InputPort =================== 17-03-17 19:08:14.268 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-17 19:08:14.308 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:08:15.748 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:08:15.778 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:08:16.028 -07 000000593 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.986717, 17-03-17 19:08:16.198 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:08:16.228 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:08:16.228 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete 17-03-17 19:08:16.228 -07 000000610 INF: =================== Cycle #22, Pumping Reagent USM (2) =================== 17-03-17 19:08:16.358 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:08:16.388 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-17 19:08:16.388 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-17 19:08:16.518 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:08:16.548 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-17 19:08:16.548 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-17 19:08:16.548 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-17 19:08:16.658 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0 17-03-17 19:08:16.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=255, R2=272, Total=527. Warn if over 250 bubbles per interval. 17-03-17 19:08:16.678 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-17 19:08:16.708 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:08:17.138 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:08:17.168 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:08:17.168 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-17 19:08:17.168 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:08:18.388 -07 000000610 INF: AsyncDelayTimer waited 1217ms 17-03-17 19:08:18.388 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-17 19:08:18.388 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:08:18.408 -07 000000610 INF: ReagentValve: Recv 02\r 17-03-17 19:08:18.408 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions. 17-03-17 19:08:18.408 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-17 19:08:19.448 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-17 19:08:19.468 -07 000000610 INF: ReagentValve: Recv 00E3\r 17-03-17 19:08:19.468 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%) 17-03-17 19:08:19.518 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:08:19.538 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-17 19:08:19.538 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-17 19:08:19.638 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:08:19.638 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-17 19:08:19.638 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:08:19.668 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-17 19:08:19.668 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-17 19:08:19.668 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-17 19:08:19.798 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-17 19:08:19.838 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:08:20.708 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:08:20.738 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:08:20.738 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete 17-03-17 19:08:20.738 -07 000000610 INF: =================== Cycle #22, Pumping Reagent PR2 (3) =================== 17-03-17 19:08:20.868 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:08:20.898 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-17 19:08:20.898 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-17 19:08:21.028 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-17 19:08:21.058 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-17 19:08:21.058 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-17 19:08:21.058 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-17 19:08:21.188 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-17 19:08:21.218 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:08:21.388 -07 000000593 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.990831, 17-03-17 19:08:21.648 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-17 19:08:21.658 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 1 17-03-17 19:08:21.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=1, R2=0, Total=1. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=272, Total=528. Warn if over 250 bubbles per interval. 17-03-17 19:08:21.678 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:08:21.678 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-17 19:08:21.678 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:08:21.678 -07 000000424 INF: WaitCommand(10000) start 17-03-17 19:08:21.678 -07 000000569 INF: =================== Dispense to DispenseAndWait =================== 17-03-17 19:08:21.678 -07 000000569 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-17 19:08:22.898 -07 000000569 INF: AsyncDelayTimer waited 1216ms 17-03-17 19:08:22.898 -07 000000569 INF: LanePump: Xmit /1?\r 17-03-17 19:08:22.928 -07 000000569 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-17 19:08:22.928 -07 000000569 INF: LanePump: Current Position of Pump is: 1110 17-03-17 19:08:23.058 -07 000000569 INF: LanePump: Xmit /1V1500OA0R\r 17-03-17 19:08:23.098 -07 000000569 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:08:24.628 -07 000000569 INF: LanePump: Xmit /1Q\r 17-03-17 19:08:24.658 -07 000000569 INF: LanePump: Recv /0@(0x03)\r\n 17-03-17 19:08:25.078 -07 000000569 INF: LanePump: Xmit /1Q\r 17-03-17 19:08:25.108 -07 000000569 INF: LanePump: Recv /0`(0x03)\r\n 17-03-17 19:08:25.108 -07 000000569 INF: LanePump: Waited 2009 ms for pump motion to complete 17-03-17 19:08:25.108 -07 000000569 INF: =================== Dispense to DispenseAndWait =================== 17-03-17 19:08:25.108 -07 000000569 INF: =================== =================== 17-03-17 19:08:26.658 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0 17-03-17 19:08:26.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:08:26.748 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.981281, 17-03-17 19:08:31.658 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:08:31.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:08:31.688 -07 000000424 INF: WaitCommand(10000) end 17-03-17 19:08:31.688 -07 000000610 INF: =================== Cycle #22, Imaging =================== 17-03-17 19:08:31.688 -07 000000610 INF: Imaging Cycle 22: ScanTilesCommand Cycle 22 time start. 17-03-17 19:08:31.688 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand 17-03-17 19:08:31.688 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:08:31.718 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-17 19:08:31.718 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions. 17-03-17 19:08:31.718 -07 000000610 INF: ReagentValve: Xmit -18\r 17-03-17 19:08:32.018 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-17 19:08:32.038 -07 000000610 INF: ReagentValve: Recv 0278\r 17-03-17 19:08:32.038 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%) 17-03-17 19:08:32.088 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-17 19:08:32.108 -07 000000610 INF: ReagentValve: Recv 18\r 17-03-17 19:08:32.108 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.981281, 17-03-17 19:08:32.108 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:08:32.108 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:08:32.108 -07 000000382 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start. 17-03-17 19:08:32.108 -07 000000382 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:08:32.118 -07 000000382 INF: FPGA: Xmit EXLED1ON\n [RedLED] 17-03-17 19:08:32.118 -07 000000593 INF: FPGA: Recv EXLED1ON 17-03-17 19:08:32.128 -07 000000382 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-17 19:08:32.128 -07 000000382 INF: FPGA: Xmit EXLED1ADCR\n [RedLED] 17-03-17 19:08:32.748 -07 000000424 INF: FPGA: Recv EXLED1ADCR 22967 17-03-17 19:08:32.748 -07 000000382 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 610 ms to get response, and 620 ms overall 17-03-17 19:08:32.748 -07 000000382 INF: RedLED: Using Red data: Photodiode ADC 22967 --> 7.4 mW (old method), or 203.7 mW (new method). Difference = 196.3 mW 17-03-17 19:08:32.768 -07 000000382 INF: FPGA: Xmit EXLED1OFF\n [RedLED] 17-03-17 19:08:32.768 -07 000000462 INF: FPGA: Recv EXLED1OFF 17-03-17 19:08:32.778 -07 000000382 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 28 ms overall 17-03-17 19:08:32.778 -07 000000382 INF: RedLED: LED was on for 650 ms 17-03-17 19:08:32.778 -07 000000382 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 662 ms. 17-03-17 19:08:32.778 -07 000000382 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start. 17-03-17 19:08:32.778 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:08:32.778 -07 000000382 INF: FPGA: Xmit EXLED2ON\n [GreenLED] 17-03-17 19:08:32.778 -07 000000502 INF: FPGA: Recv EXLED2ON 17-03-17 19:08:32.788 -07 000000382 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:08:32.788 -07 000000382 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED] 17-03-17 19:08:32.788 -07 000000429 INF: FPGA: Recv EXLED1ADCR 2095 17-03-17 19:08:32.798 -07 000000382 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:32.798 -07 000000382 INF: GreenLED: Using Green data: Photodiode ADC 2095 --> 0.9 mW (old method), or 182.1 mW (new method). Difference = 181.2 mW 17-03-17 19:08:32.798 -07 000000382 INF: FPGA: Xmit EXLED2OFF\n [GreenLED] 17-03-17 19:08:32.798 -07 000000593 INF: FPGA: Recv EXLED2OFF 17-03-17 19:08:32.808 -07 000000382 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:32.808 -07 000000382 INF: GreenLED: LED was on for 19 ms 17-03-17 19:08:32.808 -07 000000382 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms. 17-03-17 19:08:32.808 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator] 17-03-17 19:08:32.808 -07 000000593 INF: FPGA: Recv EMCUR 17-03-17 19:08:32.818 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:08:32.818 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator] 17-03-17 19:08:33.318 -07 000000462 INF: FPGA: Recv EMOUT 17-03-17 19:08:33.318 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall 17-03-17 19:08:33.318 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator] 17-03-17 19:08:33.318 -07 000000502 INF: FPGA: Recv EMCUR 17-03-17 19:08:33.328 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:08:33.328 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-17 19:08:33.328 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.380859375, Z-Position -0.127434954852065. ------ 17-03-17 19:08:33.328 -07 000000593 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:08:33.328 -07 000000429 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17938 mm 17-03-17 19:08:33.328 -07 000000429 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:08:33.338 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True) 17-03-17 19:08:33.338 -07 000000424 INF: Y Motor: Moving to 59.9126 mm, started at 75.3809 mm, delta = -15.4683 mm 17-03-17 19:08:33.338 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 39186, sync = True, waitForSettling = False) 17-03-17 19:08:33.338 -07 000000561 INF: Z Motor: Moving to -0.179382 mm, started at -0.127435 mm, distance = -51.95 um 17-03-17 19:08:33.338 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:33.338 -07 000000382 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:08:33.338 -07 000000593 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 4 ms overall 17-03-17 19:08:33.338 -07 000000462 INF: FPGA: Recv YRDPOS 154381 17-03-17 19:08:33.348 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:33.348 -07 000000593 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:08:33.348 -07 000000424 INF: Y Motor: Encoder = 154381 = motor step 120610.2 = 75.3813 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:33.348 -07 000000424 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False 17-03-17 19:08:33.348 -07 000000424 INF: Y Motor: Moving to 122701 encoder counts 17-03-17 19:08:33.358 -07 000000561 INF: FPGA: Xmit ZDACW 39186\n [Z Motor] 17-03-17 19:08:33.358 -07 000000382 INF: FPGA: Recv ZDACW 17-03-17 19:08:33.368 -07 000000561 INF: FPGA: 'ZDACW 39186' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-17 19:08:33.368 -07 000000424 INF: FPGA: Xmit YMVTO 122701\n [Y Motor] 17-03-17 19:08:33.378 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:33.378 -07 000000382 INF: FPGA: Recv ZDACR 39186 17-03-17 19:08:33.388 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:08:33.388 -07 000000561 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet)) 17-03-17 19:08:33.548 -07 000000561 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:08:33.548 -07 000000593 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 210 ms overall 17-03-17 19:08:35.048 -07 000000627 INF: FPGA: Recv YMVTO 122703 24775 17-03-17 19:08:35.048 -07 000000424 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1703 ms overall 17-03-17 19:08:35.048 -07 000000424 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm) 17-03-17 19:08:35.048 -07 000000424 INF: Y Motor: To move from 75.381 to 59.913 (-15.468 mm) should take 24750 steps, but required 24775 steps (15.484 mm). Slippage = 0.016 mm (0.00%). 17-03-17 19:08:35.048 -07 000000424 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1703 ms, distance = 15.468 mm, average velocity = 9.083 mm/sec 17-03-17 19:08:36.658 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:08:36.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:08:37.898 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:37.898 -07 000000627 INF: FPGA: Recv YRDPOS 122699 17-03-17 19:08:37.908 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:37.908 -07 000000424 INF: Y Motor: Encoder = 122699 = motor step 95858.6 = 59.9116 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:37.928 -07 000000424 INF: Y Motor: After move to 59.912609, error = -0.000988, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:08:37.928 -07 000000424 INF: Y Motor: Position error after settling = -2 encoder counts (-0.001 mm), Delta during settling = -4 counts (-0.002 mm) 17-03-17 19:08:37.928 -07 000000424 INF: Y Motor: Moved to 59.9116 after 4592 ms 17-03-17 19:08:37.928 -07 000000429 INF: Z Motor: EndOfMoveAbsStepped: target = -0.179382 mm (DAC = 39186) 17-03-17 19:08:37.928 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:37.928 -07 000000462 INF: FPGA: Recv ZSGSRD 37214 17-03-17 19:08:37.938 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:08:37.938 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:37.938 -07 000000593 INF: FPGA: Recv ZSGSRD 37216 17-03-17 19:08:37.948 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:37.948 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:37.948 -07 000000462 INF: FPGA: Recv ZSGSRD 37210 17-03-17 19:08:37.958 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:37.958 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:37.958 -07 000000382 INF: FPGA: Recv ZSGSRD 37213 17-03-17 19:08:37.968 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:37.968 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:37.968 -07 000000502 INF: FPGA: Recv ZSGSRD 37211 17-03-17 19:08:37.978 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:37.978 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:37.978 -07 000000382 INF: FPGA: Recv ZSGSRD 37213 17-03-17 19:08:37.988 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:37.988 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:37.988 -07 000000627 INF: FPGA: Recv ZSGSRD 37216 17-03-17 19:08:37.998 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:37.998 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:37.998 -07 000000593 INF: FPGA: Recv ZSGSRD 37216 17-03-17 19:08:38.008 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.008 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:38.008 -07 000000382 INF: FPGA: Recv ZSGSRD 37213 17-03-17 19:08:38.018 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.018 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:38.018 -07 000000462 INF: FPGA: Recv ZSGSRD 37211 17-03-17 19:08:38.028 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.028 -07 000000429 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:38.028 -07 000000502 INF: FPGA: Recv ZPIEZORD 33613 17-03-17 19:08:38.038 -07 000000429 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.038 -07 000000429 INF: Z Motor: Piezo is near 51.8 V (nominally 0 to 100 V), expect near 59.8 V, since DAC is at 5.979 V. Piezo Error = -8.0 V. 17-03-17 19:08:38.038 -07 000000429 INF: Z Motor: ReadAdcAverage: Commanded Z = -179.4 um, Read 10 ADC samples: Avg = 37213 (-178.5 uncal um), Error = 0.9 uncal um, Median = 37213 (-178.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 37210 (-178.5 uncal um), Max = 37216 (-178.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-17 19:08:38.038 -07 000000429 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37213, posNoise = 3, negNoise = 3 17-03-17 19:08:38.038 -07 000000429 INF: Z Motor: After move to -0.179382, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:38.038 -07 000000429 INF: Z Motor: Settle wait time = 4595 ms, measure time = 105 ms (allowed 150 ms), total time = 4700 ms 17-03-17 19:08:38.038 -07 000000429 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-17 19:08:38.088 -07 000000429 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4752 ms 17-03-17 19:08:38.088 -07 000000429 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:08:38.088 -07 000000382 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.993549, 17-03-17 19:08:38.088 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:08:38.088 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:08:38.088 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:08:38.088 -07 000000482 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:08:38.088 -07 000000478 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:08:38.088 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:08:38.098 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:08:38.098 -07 000000478 INF: Camera: sBCa_SetPowerMode(785074288, 1) start. 17-03-17 19:08:38.118 -07 000000478 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 22 ms. 17-03-17 19:08:38.118 -07 000000478 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:08:38.118 -07 000000478 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms. 17-03-17 19:08:38.118 -07 000000478 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:08:38.138 -07 000000478 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-17 19:08:38.138 -07 000000478 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 41 ms. 17-03-17 19:08:38.138 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:08:38.188 -07 000000382 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:08:38.378 -07 000000627 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:08:38.388 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:08:38.388 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:08:38.388 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1187843856, 0x0, 559484976) start. 17-03-17 19:08:38.418 -07 000000547 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:08:38.428 -07 000000502 INF: FPGA: Recv CAMSNAP 17-03-17 19:08:38.428 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 280 ms to get response, and 285 ms overall 17-03-17 19:08:38.508 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1187843856, 0x0, 559484976) end. Duration was 127 ms. 17-03-17 19:08:38.508 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:38.518 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms. 17-03-17 19:08:38.518 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-17 19:08:38.528 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:08:38.528 -07 000000618 INF: Image SNR check: start 17-03-17 19:08:38.528 -07 000000502 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:08:38.538 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:08:38.538 -07 000000627 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:08:38.538 -07 000000618 INF: Image SNR check: pass [peak (Max-Min)=69.09] 17-03-17 19:08:38.538 -07 000000618 INF: Autofocus start 17-03-17 19:08:38.538 -07 000000618 INF: MeasureProfile start 17-03-17 19:08:38.558 -07 000000618 INF: MeasureProfile done 17-03-17 19:08:38.558 -07 000000618 INF: X=32 Z correction [um]=0.09220707 17-03-17 19:08:38.558 -07 000000618 INF: Autofocus finished 17-03-17 19:08:38.738 -07 000000448 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:08:38.738 -07 000000627 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-17 19:08:38.738 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91162109375, Z-position -0.179387558442485. ---------- 17-03-17 19:08:38.738 -07 000000610 INF: Cycle 22 Tile 1 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:08:38.748 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37719, sync = True, waitForSettling = True) 17-03-17 19:08:38.748 -07 000000610 INF: Z Motor: Moving to -0.172667 mm, started at -0.179388 mm, distance = 6.72 um 17-03-17 19:08:38.748 -07 000000610 INF: FPGA: Xmit ZDACW 37719\n [Z Motor] 17-03-17 19:08:38.748 -07 000000482 INF: FPGA: Recv ZDACW 17-03-17 19:08:38.758 -07 000000610 INF: FPGA: 'ZDACW 37719' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.758 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:38.758 -07 000000478 INF: FPGA: Recv ZDACR 37719 17-03-17 19:08:38.768 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.768 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:08:38.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:38.918 -07 000000627 INF: FPGA: Recv ZSGSRD 36174 17-03-17 19:08:38.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:38.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:38.928 -07 000000382 INF: FPGA: Recv ZSGSRD 36166 17-03-17 19:08:38.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:38.938 -07 000000561 INF: FPGA: Recv ZSGSRD 36169 17-03-17 19:08:38.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:38.948 -07 000000448 INF: FPGA: Recv ZSGSRD 36170 17-03-17 19:08:38.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:38.958 -07 000000627 INF: FPGA: Recv ZSGSRD 36172 17-03-17 19:08:38.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:38.968 -07 000000382 INF: FPGA: Recv ZSGSRD 36173 17-03-17 19:08:38.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:38.978 -07 000000593 INF: FPGA: Recv ZSGSRD 36165 17-03-17 19:08:38.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:38.988 -07 000000448 INF: FPGA: Recv ZSGSRD 36171 17-03-17 19:08:38.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:38.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:38.998 -07 000000424 INF: FPGA: Recv ZSGSRD 36168 17-03-17 19:08:39.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:39.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:39.008 -07 000000382 INF: FPGA: Recv ZSGSRD 36166 17-03-17 19:08:39.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:39.018 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:39.018 -07 000000593 INF: FPGA: Recv ZPIEZORD 32209 17-03-17 19:08:39.028 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:39.028 -07 000000610 INF: Z Motor: Piezo is near 48.8 V (nominally 0 to 100 V), expect near 57.6 V, since DAC is at 5.756 V. Piezo Error = -8.7 V. 17-03-17 19:08:39.028 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.7 um, Read 10 ADC samples: Avg = 36169 (-171.8 uncal um), Error = 0.9 uncal um, Median = 36170 (-171.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 36165 (-171.8 uncal um), Max = 36174 (-171.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-17 19:08:39.028 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36169, posNoise = 5, negNoise = 4 17-03-17 19:08:39.028 -07 000000610 INF: Z Motor: After move to -0.172667, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:39.028 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-17 19:08:39.028 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:08:39.028 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:08:39.028 -07 000000382 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:08:39.028 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:08:39.028 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:08:39.028 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:08:39.028 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:08:39.028 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:08:39.028 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:08:39.028 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:08:39.028 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-17 19:08:39.028 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074704, 1) start. 17-03-17 19:08:39.038 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:08:39.038 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:08:39.048 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-17 19:08:39.048 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:08:39.058 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 22 ms. 17-03-17 19:08:39.058 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:08:39.058 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:08:39.058 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:08:39.068 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms. 17-03-17 19:08:39.068 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 40 ms. 17-03-17 19:08:39.068 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37896 150\n [Camera] 17-03-17 19:08:39.268 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:08:39.668 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:08:39.668 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:08:39.668 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:39.668 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:39.668 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start. 17-03-17 19:08:39.668 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:08:39.668 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:08:39.668 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:39.668 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:39.668 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) start. 17-03-17 19:08:39.858 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37896 783 17-03-17 19:08:40.008 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:08:40.068 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 400 ms. 17-03-17 19:08:40.068 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-17 19:08:40.068 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:40.078 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) end. Duration was 400 ms. 17-03-17 19:08:40.078 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-17 19:08:40.078 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:40.078 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms. 17-03-17 19:08:40.078 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms. 17-03-17 19:08:40.078 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms. 17-03-17 19:08:40.088 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 416 ms. 17-03-17 19:08:40.198 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:08:40.208 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:08:40.208 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:40.338 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:08:40.338 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:08:40.338 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:40.338 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) start. 17-03-17 19:08:40.338 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:40.348 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:40.348 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start. 17-03-17 19:08:40.398 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:08:40.398 -07 000000448 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:08:40.398 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37896 150' command took 2 ms to send, 1311 ms to get response, and 1324 ms overall 17-03-17 19:08:40.398 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.173041 17-03-17 19:08:40.398 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17304 mm 17-03-17 19:08:40.398 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:08:40.398 -07 000000478 INF: Z Motor: Entering MoveAbsStepped (DAC = 37801, sync = True, waitForSettling = False) 17-03-17 19:08:40.398 -07 000000478 INF: Z Motor: Moving to -0.173042 mm, started at -0.172681 mm, distance = -0.36 um 17-03-17 19:08:40.398 -07 000000478 INF: FPGA: Xmit ZDACW 37801\n [Z Motor] 17-03-17 19:08:40.398 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True) 17-03-17 19:08:40.398 -07 000000429 INF: Y Motor: Moving to 60.7426 mm, started at 59.9116 mm, delta = 0.8310 mm 17-03-17 19:08:40.398 -07 000000618 INF: FPGA: Recv ZDACW 17-03-17 19:08:40.408 -07 000000478 INF: FPGA: 'ZDACW 37801' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-17 19:08:40.408 -07 000000478 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:40.408 -07 000000618 INF: FPGA: Recv ZDACR 37801 17-03-17 19:08:40.418 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:40.418 -07 000000478 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:40.418 -07 000000478 INF: Z Motor: MoveAbsStepped took 13 ms (did NOT wait for settling yet)) 17-03-17 19:08:40.418 -07 000000502 INF: FPGA: Recv YRDPOS 122699 17-03-17 19:08:40.428 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall 17-03-17 19:08:40.428 -07 000000429 INF: Y Motor: Encoder = 122699 = motor step 95858.6 = 59.9116 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:40.428 -07 000000429 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:08:40.428 -07 000000429 INF: Y Motor: Moving 1330 steps2 17-03-17 19:08:40.428 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:08:40.748 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 394 ms. 17-03-17 19:08:40.748 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) end. Duration was 402 ms. 17-03-17 19:08:40.748 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms. 17-03-17 19:08:40.748 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:40.748 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-17 19:08:40.748 -07 000000547 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:40.748 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:08:40.748 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:08:40.748 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 545 ms. 17-03-17 19:08:40.758 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms. 17-03-17 19:08:40.798 -07 000000502 INF: FPGA: Recv YMVTILE 17-03-17 19:08:40.798 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall 17-03-17 19:08:40.828 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:40.838 -07 000000569 INF: FPGA: Recv YRDPOS 124383 17-03-17 19:08:40.838 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 4 ms to get response, and 6 ms overall 17-03-17 19:08:40.838 -07 000000429 INF: Y Motor: Encoder = 124383 = motor step 97174.2 = 60.7339 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:40.838 -07 000000429 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm) 17-03-17 19:08:40.838 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.831 mm, average velocity = 2.198 mm/sec 17-03-17 19:08:41.658 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:08:41.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:08:41.788 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:41.788 -07 000000424 INF: FPGA: Recv YRDPOS 124383 17-03-17 19:08:41.798 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:41.798 -07 000000429 INF: Y Motor: Encoder = 124383 = motor step 97174.2 = 60.7339 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:41.818 -07 000000429 INF: Y Motor: After move to 60.742607, error = -0.008720, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:08:41.818 -07 000000429 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:08:41.818 -07 000000429 INF: Y Motor: Moved to 60.7339 after 1413 ms (table move) 17-03-17 19:08:41.818 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173042 mm (DAC = 37801) 17-03-17 19:08:41.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:41.838 -07 000000424 INF: FPGA: Recv ZSGSRD 36225 17-03-17 19:08:41.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 26 ms overall 17-03-17 19:08:41.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:41.848 -07 000000569 INF: FPGA: Recv ZSGSRD 36232 17-03-17 19:08:41.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:41.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:41.878 -07 000000429 INF: FPGA: Recv ZSGSRD 36223 17-03-17 19:08:41.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-17 19:08:41.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:41.888 -07 000000424 INF: FPGA: Recv ZSGSRD 36228 17-03-17 19:08:41.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:41.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:41.908 -07 000000424 INF: FPGA: Recv ZSGSRD 36224 17-03-17 19:08:41.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:08:41.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:41.918 -07 000000547 INF: FPGA: Recv ZSGSRD 36225 17-03-17 19:08:41.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:41.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:41.928 -07 000000429 INF: FPGA: Recv ZSGSRD 36228 17-03-17 19:08:41.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:41.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:41.938 -07 000000547 INF: FPGA: Recv ZSGSRD 36233 17-03-17 19:08:41.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:41.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:41.948 -07 000000429 INF: FPGA: Recv ZSGSRD 36229 17-03-17 19:08:41.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:41.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:41.958 -07 000000547 INF: FPGA: Recv ZSGSRD 36225 17-03-17 19:08:41.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:41.968 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:41.968 -07 000000502 INF: FPGA: Recv ZPIEZORD 32303 17-03-17 19:08:41.978 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:41.978 -07 000000610 INF: Z Motor: Piezo is near 49.0 V (nominally 0 to 100 V), expect near 57.7 V, since DAC is at 5.768 V. Piezo Error = -8.7 V. 17-03-17 19:08:41.978 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.0 um, Read 10 ADC samples: Avg = 36227 (-172.2 uncal um), Error = 0.9 uncal um, Median = 36226 (-172.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36223 (-172.1 uncal um), Max = 36233 (-172.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-17 19:08:41.978 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36227, posNoise = 6, negNoise = 4 17-03-17 19:08:41.978 -07 000000610 INF: Z Motor: After move to -0.173042, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:41.978 -07 000000610 INF: Z Motor: Settle wait time = 1416 ms, measure time = 157 ms (allowed 150 ms), total time = 1573 ms 17-03-17 19:08:41.978 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 157 ms, longer than max expected time of 150 ms 17-03-17 19:08:41.978 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1576 ms 17-03-17 19:08:41.978 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:08:41.978 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73388671875, Z-position -0.173053285270709. ---------- 17-03-17 19:08:41.978 -07 000000610 INF: Cycle 22 Tile 2 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:08:41.978 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37624, sync = True, waitForSettling = True) 17-03-17 19:08:41.978 -07 000000610 INF: Z Motor: Moving to -0.172232 mm, started at -0.173053 mm, distance = 0.82 um 17-03-17 19:08:41.978 -07 000000610 INF: FPGA: Xmit ZDACW 37624\n [Z Motor] 17-03-17 19:08:41.978 -07 000000502 INF: FPGA: Recv ZDACW 17-03-17 19:08:41.988 -07 000000610 INF: FPGA: 'ZDACW 37624' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:08:41.988 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:41.988 -07 000000478 INF: FPGA: Recv ZDACR 37624 17-03-17 19:08:41.998 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:41.998 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:08:42.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:42.148 -07 000000424 INF: FPGA: Recv ZSGSRD 36099 17-03-17 19:08:42.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:42.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:42.158 -07 000000547 INF: FPGA: Recv ZSGSRD 36110 17-03-17 19:08:42.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:42.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:42.168 -07 000000424 INF: FPGA: Recv ZSGSRD 36102 17-03-17 19:08:42.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:42.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:42.178 -07 000000547 INF: FPGA: Recv ZSGSRD 36099 17-03-17 19:08:42.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:42.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:42.188 -07 000000502 INF: FPGA: Recv ZSGSRD 36104 17-03-17 19:08:42.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:42.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:42.198 -07 000000547 INF: FPGA: Recv ZSGSRD 36100 17-03-17 19:08:42.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:42.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:42.208 -07 000000502 INF: FPGA: Recv ZSGSRD 36098 17-03-17 19:08:42.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:42.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:42.218 -07 000000547 INF: FPGA: Recv ZSGSRD 36095 17-03-17 19:08:42.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:42.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:42.228 -07 000000502 INF: FPGA: Recv ZSGSRD 36103 17-03-17 19:08:42.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:42.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:42.238 -07 000000547 INF: FPGA: Recv ZSGSRD 36109 17-03-17 19:08:42.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:42.248 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:42.248 -07 000000569 INF: FPGA: Recv ZPIEZORD 32149 17-03-17 19:08:42.258 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:42.258 -07 000000610 INF: Z Motor: Piezo is near 48.7 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.741 V. Piezo Error = -8.7 V. 17-03-17 19:08:42.258 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36102 (-171.4 uncal um), Error = 0.9 uncal um, Median = 36101 (-171.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 36095 (-171.3 uncal um), Max = 36110 (-171.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-17 19:08:42.258 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36102, posNoise = 8, negNoise = 7 17-03-17 19:08:42.258 -07 000000610 INF: Z Motor: After move to -0.172232, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:42.258 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-17 19:08:42.258 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:08:42.258 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:08:42.258 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:08:42.258 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:08:42.258 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:08:42.258 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:08:42.258 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:08:42.258 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:08:42.258 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:08:42.258 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:08:42.258 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:08:42.258 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:08:42.268 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:08:42.268 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:08:42.268 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-17 19:08:42.268 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:08:42.278 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-17 19:08:42.278 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:08:42.278 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:08:42.278 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:08:42.288 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37801 150\n [Camera] 17-03-17 19:08:42.478 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:08:42.878 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:08:42.878 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:08:42.878 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:42.888 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:08:42.888 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:08:42.888 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:42.888 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:42.888 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) start. 17-03-17 19:08:42.888 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:42.888 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start. 17-03-17 19:08:43.078 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37801 783 17-03-17 19:08:43.228 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:08:43.288 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) end. Duration was 396 ms. 17-03-17 19:08:43.288 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-17 19:08:43.288 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:43.288 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 397 ms. 17-03-17 19:08:43.288 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms. 17-03-17 19:08:43.288 -07 000000448 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:43.288 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:08:43.288 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms. 17-03-17 19:08:43.288 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:08:43.298 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms. 17-03-17 19:08:43.418 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:08:43.418 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:08:43.418 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:43.538 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:08:43.538 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:08:43.538 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:43.538 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:43.538 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-17 19:08:43.548 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.011254, 17-03-17 19:08:43.548 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:43.548 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:08:43.608 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:08:43.608 -07 000000478 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:08:43.608 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37801 150' command took 2 ms to send, 1313 ms to get response, and 1323 ms overall 17-03-17 19:08:43.608 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-17 19:08:43.608 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.73388671875, Z-Position -0.172250258752989. ------ 17-03-17 19:08:43.608 -07 000000502 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:08:43.608 -07 000000593 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17879 mm 17-03-17 19:08:43.608 -07 000000593 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:08:43.618 -07 000000547 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:08:43.618 -07 000000502 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-17 19:08:43.618 -07 000000478 INF: Z Motor: Entering MoveAbsStepped (DAC = 39057, sync = True, waitForSettling = False) 17-03-17 19:08:43.618 -07 000000478 INF: Z Motor: Moving to -0.178791 mm, started at -0.172250 mm, distance = -6.54 um 17-03-17 19:08:43.618 -07 000000478 INF: FPGA: Xmit ZDACW 39057\n [Z Motor] 17-03-17 19:08:43.618 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True) 17-03-17 19:08:43.618 -07 000000569 INF: Y Motor: Moving to 61.5726 mm, started at 60.7339 mm, delta = 0.8387 mm 17-03-17 19:08:43.618 -07 000000547 INF: FPGA: Recv ZDACW 17-03-17 19:08:43.628 -07 000000478 INF: FPGA: 'ZDACW 39057' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:08:43.628 -07 000000478 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:43.628 -07 000000424 INF: FPGA: Recv ZDACR 39057 17-03-17 19:08:43.638 -07 000000502 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:08:43.638 -07 000000478 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:43.638 -07 000000478 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet)) 17-03-17 19:08:43.648 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:43.648 -07 000000482 INF: FPGA: Recv YRDPOS 124383 17-03-17 19:08:43.658 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 36 ms overall 17-03-17 19:08:43.658 -07 000000569 INF: Y Motor: Encoder = 124383 = motor step 97174.2 = 60.7339 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:43.658 -07 000000569 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:08:43.658 -07 000000569 INF: Y Motor: Moving 1342 steps-18 17-03-17 19:08:43.658 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:08:43.838 -07 000000448 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:08:43.838 -07 000000502 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 221 ms overall 17-03-17 19:08:43.938 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 397 ms. 17-03-17 19:08:43.938 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms. 17-03-17 19:08:43.938 -07 000000627 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:43.938 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 395 ms. 17-03-17 19:08:43.938 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-17 19:08:43.938 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:43.938 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:08:43.938 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 525 ms. 17-03-17 19:08:43.948 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:08:43.948 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms. 17-03-17 19:08:44.028 -07 000000424 INF: FPGA: Recv YMVTILE 17-03-17 19:08:44.028 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall 17-03-17 19:08:44.068 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:44.068 -07 000000561 INF: FPGA: Recv YRDPOS 126084 17-03-17 19:08:44.078 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:08:44.078 -07 000000569 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:44.078 -07 000000569 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm) 17-03-17 19:08:44.078 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.839 mm, average velocity = 2.219 mm/sec 17-03-17 19:08:45.028 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:45.028 -07 000000448 INF: FPGA: Recv YRDPOS 126084 17-03-17 19:08:45.038 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:45.038 -07 000000569 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:45.058 -07 000000569 INF: Y Motor: After move to 61.572609, error = -0.008156, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:08:45.058 -07 000000569 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:08:45.058 -07 000000569 INF: Y Motor: Moved to 61.5645 after 1437 ms (table move) 17-03-17 19:08:45.058 -07 000000593 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178791 mm (DAC = 39057) 17-03-17 19:08:45.058 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:45.058 -07 000000429 INF: FPGA: Recv ZSGSRD 37119 17-03-17 19:08:45.068 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:08:45.068 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:45.068 -07 000000569 INF: FPGA: Recv ZSGSRD 37116 17-03-17 19:08:45.078 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:45.078 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:45.078 -07 000000478 INF: FPGA: Recv ZSGSRD 37119 17-03-17 19:08:45.088 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:45.088 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:45.088 -07 000000569 INF: FPGA: Recv ZSGSRD 37119 17-03-17 19:08:45.098 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:45.098 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:45.098 -07 000000478 INF: FPGA: Recv ZSGSRD 37122 17-03-17 19:08:45.108 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:45.108 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:45.108 -07 000000618 INF: FPGA: Recv ZSGSRD 37130 17-03-17 19:08:45.118 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:45.118 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:45.118 -07 000000382 INF: FPGA: Recv ZSGSRD 37124 17-03-17 19:08:45.128 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:45.128 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:45.128 -07 000000448 INF: FPGA: Recv ZSGSRD 37117 17-03-17 19:08:45.138 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:45.138 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:45.138 -07 000000482 INF: FPGA: Recv ZSGSRD 37127 17-03-17 19:08:45.148 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:45.148 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:45.148 -07 000000482 INF: FPGA: Recv ZSGSRD 37121 17-03-17 19:08:45.158 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:45.158 -07 000000593 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:45.158 -07 000000448 INF: FPGA: Recv ZPIEZORD 33467 17-03-17 19:08:45.168 -07 000000593 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:45.168 -07 000000593 INF: Z Motor: Piezo is near 51.5 V (nominally 0 to 100 V), expect near 59.6 V, since DAC is at 5.960 V. Piezo Error = -8.1 V. 17-03-17 19:08:45.168 -07 000000593 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.8 um, Read 10 ADC samples: Avg = 37121 (-177.9 uncal um), Error = 0.9 uncal um, Median = 37120 (-177.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 37116 (-177.9 uncal um), Max = 37130 (-178.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:08:45.168 -07 000000593 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37121, posNoise = 9, negNoise = 5 17-03-17 19:08:45.168 -07 000000593 INF: Z Motor: After move to -0.178791, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:45.168 -07 000000593 INF: Z Motor: Settle wait time = 1443 ms, measure time = 105 ms (allowed 150 ms), total time = 1548 ms 17-03-17 19:08:45.168 -07 000000593 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-17 19:08:45.218 -07 000000593 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms 17-03-17 19:08:45.218 -07 000000593 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:08:45.218 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:08:45.218 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:08:45.218 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:08:45.218 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:08:45.218 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:08:45.218 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:08:45.218 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:08:45.218 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:08:45.228 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-17 19:08:45.228 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:08:45.238 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms. 17-03-17 19:08:45.238 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms. 17-03-17 19:08:45.238 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:08:45.288 -07 000000448 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:08:45.488 -07 000000482 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:08:45.488 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:08:45.488 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:08:45.488 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2451345512, 0x0, 559484976) start. 17-03-17 19:08:45.528 -07 000000569 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:08:45.528 -07 000000593 INF: FPGA: Recv CAMSNAP 17-03-17 19:08:45.528 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 285 ms overall 17-03-17 19:08:45.608 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2451345512, 0x0, 559484976) end. Duration was 125 ms. 17-03-17 19:08:45.608 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:45.618 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-17 19:08:45.618 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms. 17-03-17 19:08:45.628 -07 000000502 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:08:45.628 -07 000000448 INF: Autofocus start 17-03-17 19:08:45.628 -07 000000448 INF: MeasureProfile start 17-03-17 19:08:45.628 -07 000000482 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:08:45.638 -07 000000502 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:08:45.638 -07 000000502 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:08:45.638 -07 000000448 INF: MeasureProfile done 17-03-17 19:08:45.638 -07 000000448 INF: X=48 Z correction [um]=0.1739867 17-03-17 19:08:45.638 -07 000000448 INF: Autofocus finished 17-03-17 19:08:45.838 -07 000000482 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:08:45.838 -07 000000502 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 204 ms overall 17-03-17 19:08:45.838 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.564453125, Z-position -0.178796530925443. ---------- 17-03-17 19:08:45.848 -07 000000610 INF: Cycle 22 Tile 3 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:08:45.848 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37608, sync = True, waitForSettling = True) 17-03-17 19:08:45.848 -07 000000610 INF: Z Motor: Moving to -0.172158 mm, started at -0.178797 mm, distance = 6.64 um 17-03-17 19:08:45.848 -07 000000610 INF: FPGA: Xmit ZDACW 37608\n [Z Motor] 17-03-17 19:08:45.848 -07 000000448 INF: FPGA: Recv ZDACW 17-03-17 19:08:45.858 -07 000000610 INF: FPGA: 'ZDACW 37608' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:08:45.858 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:45.858 -07 000000448 INF: FPGA: Recv ZDACR 37608 17-03-17 19:08:45.868 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:45.868 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:08:46.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:46.018 -07 000000569 INF: FPGA: Recv ZSGSRD 36090 17-03-17 19:08:46.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:46.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:46.028 -07 000000448 INF: FPGA: Recv ZSGSRD 36090 17-03-17 19:08:46.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:46.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:46.038 -07 000000502 INF: FPGA: Recv ZSGSRD 36088 17-03-17 19:08:46.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:46.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:46.048 -07 000000569 INF: FPGA: Recv ZSGSRD 36085 17-03-17 19:08:46.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:46.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:46.058 -07 000000448 INF: FPGA: Recv ZSGSRD 36085 17-03-17 19:08:46.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:46.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:46.068 -07 000000569 INF: FPGA: Recv ZSGSRD 36093 17-03-17 19:08:46.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:46.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:46.078 -07 000000593 INF: FPGA: Recv ZSGSRD 36090 17-03-17 19:08:46.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:46.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:46.088 -07 000000482 INF: FPGA: Recv ZSGSRD 36087 17-03-17 19:08:46.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:46.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:46.098 -07 000000569 INF: FPGA: Recv ZSGSRD 36093 17-03-17 19:08:46.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:46.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:46.108 -07 000000482 INF: FPGA: Recv ZSGSRD 36088 17-03-17 19:08:46.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:46.118 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:46.118 -07 000000593 INF: FPGA: Recv ZPIEZORD 32113 17-03-17 19:08:46.128 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:46.128 -07 000000610 INF: Z Motor: Piezo is near 48.6 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.739 V. Piezo Error = -8.8 V. 17-03-17 19:08:46.128 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36089 (-171.3 uncal um), Error = 0.9 uncal um, Median = 36089 (-171.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 36085 (-171.3 uncal um), Max = 36093 (-171.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-17 19:08:46.128 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36089, posNoise = 4, negNoise = 4 17-03-17 19:08:46.128 -07 000000610 INF: Z Motor: After move to -0.172158, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:46.128 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-17 19:08:46.128 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:08:46.128 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:08:46.128 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:08:46.128 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:08:46.128 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:08:46.128 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:08:46.128 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:08:46.128 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:08:46.128 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:08:46.128 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:08:46.128 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:08:46.128 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:08:46.138 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-17 19:08:46.138 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:08:46.138 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:08:46.138 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:08:46.138 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-17 19:08:46.138 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 12 ms. 17-03-17 19:08:46.138 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-17 19:08:46.148 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-17 19:08:46.148 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37785 150\n [Camera] 17-03-17 19:08:46.348 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:08:46.658 -07 000000448 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:08:46.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:08:46.748 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:08:46.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:08:46.748 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:46.748 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:08:46.748 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:08:46.748 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:46.758 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:46.758 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 2470426896, 0x0, 391868352) start. 17-03-17 19:08:46.758 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:46.758 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-17 19:08:46.938 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37785 783 17-03-17 19:08:47.088 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:08:47.128 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 375 ms. 17-03-17 19:08:47.128 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-17 19:08:47.128 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:47.128 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 2470426896, 0x0, 391868352) end. Duration was 378 ms. 17-03-17 19:08:47.128 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-17 19:08:47.128 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:47.138 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:08:47.138 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:08:47.138 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-17 19:08:47.148 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-17 19:08:47.278 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:08:47.278 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:08:47.278 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:47.278 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:08:47.278 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:08:47.278 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:47.398 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:47.398 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start. 17-03-17 19:08:47.398 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:47.398 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start. 17-03-17 19:08:47.468 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:08:47.468 -07 000000448 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:08:47.468 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37785 150' command took 2 ms to send, 1315 ms to get response, and 1323 ms overall 17-03-17 19:08:47.468 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.172391 17-03-17 19:08:47.468 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17239 mm 17-03-17 19:08:47.468 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:08:47.478 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True) 17-03-17 19:08:47.478 -07 000000429 INF: Y Motor: Moving to 62.4026 mm, started at 61.5645 mm, delta = 0.8382 mm 17-03-17 19:08:47.478 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 37659, sync = True, waitForSettling = False) 17-03-17 19:08:47.478 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:47.478 -07 000000569 INF: Z Motor: Moving to -0.172392 mm, started at -0.172167 mm, distance = -0.23 um 17-03-17 19:08:47.478 -07 000000561 INF: FPGA: Recv YRDPOS 126085 17-03-17 19:08:47.488 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:47.488 -07 000000429 INF: Y Motor: Encoder = 126085 = motor step 98503.9 = 61.5649 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:47.488 -07 000000569 INF: FPGA: Xmit ZDACW 37659\n [Z Motor] 17-03-17 19:08:47.488 -07 000000482 INF: FPGA: Recv ZDACW 17-03-17 19:08:47.488 -07 000000429 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:08:47.488 -07 000000429 INF: Y Motor: Moving 1340 steps-17 17-03-17 19:08:47.498 -07 000000569 INF: FPGA: 'ZDACW 37659' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:08:47.498 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:08:47.508 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:47.508 -07 000000482 INF: FPGA: Recv ZDACR 37659 17-03-17 19:08:47.518 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:08:47.518 -07 000000569 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet)) 17-03-17 19:08:47.778 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 376 ms. 17-03-17 19:08:47.778 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-17 19:08:47.778 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:47.778 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 377 ms. 17-03-17 19:08:47.778 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-17 19:08:47.778 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:47.778 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:08:47.778 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:08:47.778 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 504 ms. 17-03-17 19:08:47.788 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 504 ms. 17-03-17 19:08:47.868 -07 000000424 INF: FPGA: Recv YMVTILE 17-03-17 19:08:47.868 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall 17-03-17 19:08:47.908 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:47.908 -07 000000502 INF: FPGA: Recv YRDPOS 127787 17-03-17 19:08:47.918 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:08:47.918 -07 000000429 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:47.918 -07 000000429 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm) 17-03-17 19:08:47.918 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.838 mm, average velocity = 2.183 mm/sec 17-03-17 19:08:48.868 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:48.868 -07 000000561 INF: FPGA: Recv YRDPOS 127787 17-03-17 19:08:48.878 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:48.878 -07 000000429 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:48.898 -07 000000429 INF: Y Motor: After move to 62.402607, error = -0.006611, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:08:48.898 -07 000000429 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:08:48.898 -07 000000429 INF: Y Motor: Moved to 62.3960 after 1419 ms (table move) 17-03-17 19:08:48.898 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172392 mm (DAC = 37659) 17-03-17 19:08:48.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:48.908 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.000345, 17-03-17 19:08:48.908 -07 000000448 INF: FPGA: Recv ZSGSRD 36128 17-03-17 19:08:48.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 17 ms overall 17-03-17 19:08:48.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:48.928 -07 000000593 INF: FPGA: Recv ZSGSRD 36124 17-03-17 19:08:48.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:08:48.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:48.938 -07 000000482 INF: FPGA: Recv ZSGSRD 36125 17-03-17 19:08:48.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:48.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:48.968 -07 000000462 INF: FPGA: Recv ZSGSRD 36118 17-03-17 19:08:48.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-17 19:08:48.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:48.978 -07 000000429 INF: FPGA: Recv ZSGSRD 36128 17-03-17 19:08:48.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:48.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:48.998 -07 000000462 INF: FPGA: Recv ZSGSRD 36126 17-03-17 19:08:49.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:08:49.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.008 -07 000000429 INF: FPGA: Recv ZSGSRD 36125 17-03-17 19:08:49.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.018 -07 000000429 INF: FPGA: Recv ZSGSRD 36130 17-03-17 19:08:49.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.028 -07 000000482 INF: FPGA: Recv ZSGSRD 36130 17-03-17 19:08:49.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.038 -07 000000429 INF: FPGA: Recv ZSGSRD 36122 17-03-17 19:08:49.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.048 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:49.048 -07 000000429 INF: FPGA: Recv ZPIEZORD 32164 17-03-17 19:08:49.058 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.058 -07 000000610 INF: Z Motor: Piezo is near 48.7 V (nominally 0 to 100 V), expect near 57.5 V, since DAC is at 5.746 V. Piezo Error = -8.8 V. 17-03-17 19:08:49.058 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.4 um, Read 10 ADC samples: Avg = 36126 (-171.5 uncal um), Error = 0.9 uncal um, Median = 36126 (-171.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36118 (-171.5 uncal um), Max = 36130 (-171.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-17 19:08:49.058 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36126, posNoise = 4, negNoise = 8 17-03-17 19:08:49.058 -07 000000610 INF: Z Motor: After move to -0.172392, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:49.058 -07 000000610 INF: Z Motor: Settle wait time = 1421 ms, measure time = 159 ms (allowed 150 ms), total time = 1580 ms 17-03-17 19:08:49.058 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 159 ms, longer than max expected time of 150 ms 17-03-17 19:08:49.058 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1583 ms 17-03-17 19:08:49.058 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:08:49.058 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39599609375, Z-position -0.172404439844391. ---------- 17-03-17 19:08:49.058 -07 000000610 INF: Cycle 22 Tile 4 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:08:49.058 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37482, sync = True, waitForSettling = True) 17-03-17 19:08:49.058 -07 000000610 INF: Z Motor: Moving to -0.171582 mm, started at -0.172404 mm, distance = 0.82 um 17-03-17 19:08:49.058 -07 000000610 INF: FPGA: Xmit ZDACW 37482\n [Z Motor] 17-03-17 19:08:49.068 -07 000000448 INF: FPGA: Recv ZDACW 17-03-17 19:08:49.068 -07 000000610 INF: FPGA: 'ZDACW 37482' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-17 19:08:49.068 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:49.068 -07 000000482 INF: FPGA: Recv ZDACR 37482 17-03-17 19:08:49.078 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.078 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:08:49.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.228 -07 000000429 INF: FPGA: Recv ZSGSRD 36000 17-03-17 19:08:49.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:49.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.238 -07 000000482 INF: FPGA: Recv ZSGSRD 35998 17-03-17 19:08:49.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.248 -07 000000482 INF: FPGA: Recv ZSGSRD 36005 17-03-17 19:08:49.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.258 -07 000000482 INF: FPGA: Recv ZSGSRD 36005 17-03-17 19:08:49.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.268 -07 000000448 INF: FPGA: Recv ZSGSRD 36004 17-03-17 19:08:49.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.278 -07 000000424 INF: FPGA: Recv ZSGSRD 36001 17-03-17 19:08:49.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.288 -07 000000502 INF: FPGA: Recv ZSGSRD 35992 17-03-17 19:08:49.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.298 -07 000000448 INF: FPGA: Recv ZSGSRD 36002 17-03-17 19:08:49.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.308 -07 000000429 INF: FPGA: Recv ZSGSRD 36002 17-03-17 19:08:49.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:49.318 -07 000000502 INF: FPGA: Recv ZSGSRD 35998 17-03-17 19:08:49.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.328 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:49.328 -07 000000502 INF: FPGA: Recv ZPIEZORD 32005 17-03-17 19:08:49.338 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:49.338 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.719 V. Piezo Error = -8.8 V. 17-03-17 19:08:49.338 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.6 um, Read 10 ADC samples: Avg = 36001 (-170.7 uncal um), Error = 0.9 uncal um, Median = 36002 (-170.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35992 (-170.7 uncal um), Max = 36005 (-170.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-17 19:08:49.338 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36001, posNoise = 4, negNoise = 9 17-03-17 19:08:49.338 -07 000000610 INF: Z Motor: After move to -0.171582, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:49.338 -07 000000610 INF: Z Motor: MoveAbsStepped took 273 ms) 17-03-17 19:08:49.338 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:08:49.338 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:08:49.338 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:08:49.338 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:08:49.338 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:08:49.338 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:08:49.338 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:08:49.338 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:08:49.338 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-17 19:08:49.338 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:08:49.338 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:08:49.338 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:08:49.348 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:08:49.348 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:08:49.348 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:08:49.348 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:08:49.358 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-17 19:08:49.358 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms. 17-03-17 19:08:49.358 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-17 19:08:49.358 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:08:49.358 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37659 150\n [Camera] 17-03-17 19:08:49.558 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:08:49.958 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:08:49.958 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:08:49.958 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:49.968 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:08:49.968 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:08:49.968 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:49.968 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:49.968 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start. 17-03-17 19:08:49.968 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:49.968 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:08:50.158 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37659 783 17-03-17 19:08:50.298 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:08:50.338 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 372 ms. 17-03-17 19:08:50.338 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-17 19:08:50.338 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:50.338 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 371 ms. 17-03-17 19:08:50.338 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-17 19:08:50.338 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:50.348 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:08:50.348 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-17 19:08:50.348 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:08:50.348 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-17 19:08:50.498 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1126 17-03-17 19:08:50.498 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1126 17-03-17 19:08:50.498 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:50.498 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1126 17-03-17 19:08:50.498 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1126 17-03-17 19:08:50.498 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:50.498 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:50.498 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2466021592, 0x0, 391868352) start. 17-03-17 19:08:50.508 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:50.508 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-17 19:08:50.688 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:08:50.688 -07 000000448 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:08:50.688 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37659 150' command took 2 ms to send, 1313 ms to get response, and 1323 ms overall 17-03-17 19:08:50.688 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.172229 17-03-17 19:08:50.688 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17223 mm 17-03-17 19:08:50.688 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:08:50.688 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True) 17-03-17 19:08:50.688 -07 000000429 INF: Y Motor: Moving to 63.2326 mm, started at 62.3960 mm, delta = 0.8366 mm 17-03-17 19:08:50.688 -07 000000448 INF: Z Motor: Entering MoveAbsStepped (DAC = 37623, sync = True, waitForSettling = False) 17-03-17 19:08:50.688 -07 000000448 INF: Z Motor: Moving to -0.172227 mm, started at -0.171601 mm, distance = -0.63 um 17-03-17 19:08:50.688 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:50.698 -07 000000448 INF: FPGA: Xmit ZDACW 37623\n [Z Motor] 17-03-17 19:08:50.698 -07 000000547 INF: FPGA: Recv YRDPOS 127787 17-03-17 19:08:50.698 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 4 ms overall 17-03-17 19:08:50.698 -07 000000429 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:50.698 -07 000000429 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:08:50.698 -07 000000429 INF: Y Motor: Moving 1339 steps-14 17-03-17 19:08:50.698 -07 000000424 INF: FPGA: Recv ZDACW 17-03-17 19:08:50.708 -07 000000448 INF: FPGA: 'ZDACW 37623' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-17 19:08:50.708 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:08:50.718 -07 000000448 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:50.718 -07 000000424 INF: FPGA: Recv ZDACR 37623 17-03-17 19:08:50.728 -07 000000448 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:08:50.728 -07 000000448 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet)) 17-03-17 19:08:50.878 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 376 ms. 17-03-17 19:08:50.888 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-17 19:08:50.888 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:50.888 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2466021592, 0x0, 391868352) end. Duration was 382 ms. 17-03-17 19:08:50.888 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-17 19:08:50.888 -07 000000482 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:50.888 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-17 19:08:50.888 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:08:50.888 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-17 19:08:50.898 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-17 19:08:51.078 -07 000000482 INF: FPGA: Recv YMVTILE 17-03-17 19:08:51.078 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall 17-03-17 19:08:51.118 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:51.118 -07 000000382 INF: FPGA: Recv YRDPOS 129485 17-03-17 19:08:51.128 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:08:51.128 -07 000000429 INF: Y Motor: Encoder = 129485 = motor step 101160.2 = 63.2251 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:51.128 -07 000000429 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm) 17-03-17 19:08:51.128 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.837 mm, average velocity = 2.167 mm/sec 17-03-17 19:08:51.658 -07 000000448 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:08:51.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:08:52.078 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:52.078 -07 000000482 INF: FPGA: Recv YRDPOS 129485 17-03-17 19:08:52.088 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:52.088 -07 000000429 INF: Y Motor: Encoder = 129485 = motor step 101160.2 = 63.2251 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:52.108 -07 000000429 INF: Y Motor: After move to 63.232609, error = -0.007511, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:08:52.108 -07 000000429 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:08:52.108 -07 000000429 INF: Y Motor: Moved to 63.2251 after 1414 ms (table move) 17-03-17 19:08:52.108 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172227 mm (DAC = 37623) 17-03-17 19:08:52.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.108 -07 000000502 INF: FPGA: Recv ZSGSRD 36090 17-03-17 19:08:52.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:08:52.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.118 -07 000000482 INF: FPGA: Recv ZSGSRD 36096 17-03-17 19:08:52.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.128 -07 000000502 INF: FPGA: Recv ZSGSRD 36096 17-03-17 19:08:52.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.138 -07 000000448 INF: FPGA: Recv ZSGSRD 36104 17-03-17 19:08:52.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.148 -07 000000382 INF: FPGA: Recv ZSGSRD 36097 17-03-17 19:08:52.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.158 -07 000000482 INF: FPGA: Recv ZSGSRD 36109 17-03-17 19:08:52.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.168 -07 000000429 INF: FPGA: Recv ZSGSRD 36101 17-03-17 19:08:52.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.178 -07 000000448 INF: FPGA: Recv ZSGSRD 36098 17-03-17 19:08:52.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.188 -07 000000429 INF: FPGA: Recv ZSGSRD 36102 17-03-17 19:08:52.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.198 -07 000000448 INF: FPGA: Recv ZSGSRD 36090 17-03-17 19:08:52.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.208 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:52.208 -07 000000429 INF: FPGA: Recv ZPIEZORD 32156 17-03-17 19:08:52.218 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.218 -07 000000610 INF: Z Motor: Piezo is near 48.7 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.741 V. Piezo Error = -8.7 V. 17-03-17 19:08:52.218 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36098 (-171.3 uncal um), Error = 0.9 uncal um, Median = 36098 (-171.3 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 36090 (-171.3 uncal um), Max = 36109 (-171.4 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-17 19:08:52.218 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36098, posNoise = 11, negNoise = 8 17-03-17 19:08:52.218 -07 000000610 INF: Z Motor: After move to -0.172227, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:52.218 -07 000000610 INF: Z Motor: Settle wait time = 1416 ms, measure time = 106 ms (allowed 150 ms), total time = 1522 ms 17-03-17 19:08:52.218 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-17 19:08:52.268 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1574 ms 17-03-17 19:08:52.268 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:08:52.268 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22509765625, Z-position -0.172224561904422. ---------- 17-03-17 19:08:52.268 -07 000000610 INF: Cycle 22 Tile 5 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:08:52.268 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37447, sync = True, waitForSettling = True) 17-03-17 19:08:52.268 -07 000000610 INF: Z Motor: Moving to -0.171421 mm, started at -0.172225 mm, distance = 0.80 um 17-03-17 19:08:52.278 -07 000000610 INF: FPGA: Xmit ZDACW 37447\n [Z Motor] 17-03-17 19:08:52.278 -07 000000547 INF: FPGA: Recv ZDACW 17-03-17 19:08:52.288 -07 000000610 INF: FPGA: 'ZDACW 37447' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-17 19:08:52.288 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:52.288 -07 000000382 INF: FPGA: Recv ZDACR 37447 17-03-17 19:08:52.298 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.298 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:08:52.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.448 -07 000000382 INF: FPGA: Recv ZSGSRD 35969 17-03-17 19:08:52.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:52.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.458 -07 000000547 INF: FPGA: Recv ZSGSRD 35977 17-03-17 19:08:52.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.468 -07 000000429 INF: FPGA: Recv ZSGSRD 35983 17-03-17 19:08:52.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.478 -07 000000547 INF: FPGA: Recv ZSGSRD 35977 17-03-17 19:08:52.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.488 -07 000000429 INF: FPGA: Recv ZSGSRD 35978 17-03-17 19:08:52.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.498 -07 000000547 INF: FPGA: Recv ZSGSRD 35978 17-03-17 19:08:52.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.508 -07 000000429 INF: FPGA: Recv ZSGSRD 35979 17-03-17 19:08:52.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.518 -07 000000429 INF: FPGA: Recv ZSGSRD 35974 17-03-17 19:08:52.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.528 -07 000000547 INF: FPGA: Recv ZSGSRD 35970 17-03-17 19:08:52.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:52.538 -07 000000429 INF: FPGA: Recv ZSGSRD 35975 17-03-17 19:08:52.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.548 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:52.548 -07 000000429 INF: FPGA: Recv ZPIEZORD 31969 17-03-17 19:08:52.558 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:52.558 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.714 V. Piezo Error = -8.8 V. 17-03-17 19:08:52.558 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.4 um, Read 10 ADC samples: Avg = 35976 (-170.6 uncal um), Error = 0.9 uncal um, Median = 35977 (-170.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35969 (-170.5 uncal um), Max = 35983 (-170.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-17 19:08:52.558 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35976, posNoise = 7, negNoise = 7 17-03-17 19:08:52.558 -07 000000610 INF: Z Motor: After move to -0.171421, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:52.558 -07 000000610 INF: Z Motor: MoveAbsStepped took 284 ms) 17-03-17 19:08:52.558 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:08:52.558 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:08:52.558 -07 000000478 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:08:52.558 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:08:52.558 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:08:52.558 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:08:52.558 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:08:52.558 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:08:52.558 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:08:52.558 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:08:52.558 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:08:52.558 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:08:52.568 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:08:52.568 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:08:52.568 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:08:52.568 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:08:52.578 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:08:52.578 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-17 19:08:52.578 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-17 19:08:52.578 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-17 19:08:52.588 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37623 150\n [Camera] 17-03-17 19:08:52.778 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:08:53.178 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:08:53.178 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:08:53.178 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:53.178 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:53.178 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-17 19:08:53.188 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:08:53.188 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:08:53.188 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:53.188 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:53.188 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) start. 17-03-17 19:08:53.378 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37623 783 17-03-17 19:08:53.528 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:08:53.558 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms. 17-03-17 19:08:53.558 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-17 19:08:53.558 -07 000000448 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:53.568 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) end. Duration was 375 ms. 17-03-17 19:08:53.568 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-17 19:08:53.568 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:53.568 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:08:53.568 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-17 19:08:53.568 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:08:53.578 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-17 19:08:53.718 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:08:53.718 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:08:53.718 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:08:53.718 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:08:53.718 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:53.718 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:53.718 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start. 17-03-17 19:08:53.718 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:53.718 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:53.718 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start. 17-03-17 19:08:53.908 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:08:53.908 -07 000000618 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:08:53.908 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37623 150' command took 2 ms to send, 1313 ms to get response, and 1324 ms overall 17-03-17 19:08:53.908 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.171839 17-03-17 19:08:53.908 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17184 mm 17-03-17 19:08:53.908 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:08:53.908 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True) 17-03-17 19:08:53.908 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 37538, sync = True, waitForSettling = False) 17-03-17 19:08:53.908 -07 000000429 INF: Z Motor: Moving to -0.171838 mm, started at -0.171441 mm, distance = -0.40 um 17-03-17 19:08:53.908 -07 000000429 INF: FPGA: Xmit ZDACW 37538\n [Z Motor] 17-03-17 19:08:53.908 -07 000000618 INF: Y Motor: Moving to 64.0626 mm, started at 63.2251 mm, delta = 0.8375 mm 17-03-17 19:08:53.918 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:54.098 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 380 ms. 17-03-17 19:08:54.098 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-17 19:08:54.098 -07 000000448 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:54.098 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 382 ms. 17-03-17 19:08:54.098 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-17 19:08:54.098 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:54.108 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:08:54.108 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:08:54.108 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-17 19:08:54.118 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-17 19:08:54.118 -07 000000502 INF: FPGA: Recv ZDACW 17-03-17 19:08:54.118 -07 000000502 INF: FPGA: Recv YRDPOS 129485 17-03-17 19:08:54.118 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 198 ms to get response, and 209 ms overall 17-03-17 19:08:54.118 -07 000000618 INF: Y Motor: Encoder = 129485 = motor step 101160.2 = 63.2251 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:54.118 -07 000000618 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:08:54.118 -07 000000618 INF: Y Motor: Moving 1340 steps-15 17-03-17 19:08:54.118 -07 000000429 INF: FPGA: 'ZDACW 37538' command took 0 ms to send, 207 ms to get response, and 209 ms overall 17-03-17 19:08:54.118 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:08:54.128 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:54.128 -07 000000502 INF: FPGA: Recv ZDACR 37538 17-03-17 19:08:54.138 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:54.138 -07 000000429 INF: Z Motor: MoveAbsStepped took 222 ms (did NOT wait for settling yet)) 17-03-17 19:08:54.428 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.007176, 17-03-17 19:08:54.498 -07 000000448 INF: FPGA: Recv YMVTILE 17-03-17 19:08:54.498 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 377 ms to get response, and 378 ms overall 17-03-17 19:08:54.538 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:54.538 -07 000000502 INF: FPGA: Recv YRDPOS 131190 17-03-17 19:08:54.548 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:08:54.548 -07 000000618 INF: Y Motor: Encoder = 131190 = motor step 102492.2 = 64.0576 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:54.548 -07 000000618 INF: Y Motor: Position error before settling (table move) = -10 encoder counts (-0.005 mm) 17-03-17 19:08:54.548 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.216 mm/sec 17-03-17 19:08:55.498 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:55.498 -07 000000429 INF: FPGA: Recv YRDPOS 131190 17-03-17 19:08:55.508 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:55.508 -07 000000618 INF: Y Motor: Encoder = 131190 = motor step 102492.2 = 64.0576 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:55.518 -07 000000618 INF: Y Motor: After move to 64.062607, error = -0.004990, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:08:55.518 -07 000000618 INF: Y Motor: Position error after settling (table move) = -10 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:08:55.518 -07 000000618 INF: Y Motor: Moved to 64.0576 after 1608 ms (table move) 17-03-17 19:08:55.518 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171838 mm (DAC = 37538) 17-03-17 19:08:55.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.528 -07 000000502 INF: FPGA: Recv ZSGSRD 36037 17-03-17 19:08:55.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-17 19:08:55.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.528 -07 000000618 INF: FPGA: Recv ZSGSRD 36047 17-03-17 19:08:55.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:08:55.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.538 -07 000000618 INF: FPGA: Recv ZSGSRD 36036 17-03-17 19:08:55.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.548 -07 000000618 INF: FPGA: Recv ZSGSRD 36031 17-03-17 19:08:55.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.558 -07 000000502 INF: FPGA: Recv ZSGSRD 36039 17-03-17 19:08:55.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.568 -07 000000618 INF: FPGA: Recv ZSGSRD 36041 17-03-17 19:08:55.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.578 -07 000000448 INF: FPGA: Recv ZSGSRD 36048 17-03-17 19:08:55.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.588 -07 000000448 INF: FPGA: Recv ZSGSRD 36038 17-03-17 19:08:55.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.598 -07 000000448 INF: FPGA: Recv ZSGSRD 36042 17-03-17 19:08:55.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.608 -07 000000429 INF: FPGA: Recv ZSGSRD 36042 17-03-17 19:08:55.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.618 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:55.618 -07 000000448 INF: FPGA: Recv ZPIEZORD 32044 17-03-17 19:08:55.628 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.628 -07 000000610 INF: Z Motor: Piezo is near 48.5 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.728 V. Piezo Error = -8.8 V. 17-03-17 19:08:55.628 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.8 um, Read 10 ADC samples: Avg = 36040 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36040 (-171.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 36031 (-170.9 uncal um), Max = 36048 (-171.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-17 19:08:55.628 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36040, posNoise = 8, negNoise = 9 17-03-17 19:08:55.628 -07 000000610 INF: Z Motor: After move to -0.171838, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:55.628 -07 000000610 INF: Z Motor: Settle wait time = 1610 ms, measure time = 102 ms (allowed 150 ms), total time = 1712 ms 17-03-17 19:08:55.628 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms 17-03-17 19:08:55.678 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1763 ms 17-03-17 19:08:55.678 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:08:55.678 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.0576171875, Z-position -0.1718519576002. ---------- 17-03-17 19:08:55.678 -07 000000610 INF: Cycle 22 Tile 6 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:08:55.678 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37361, sync = True, waitForSettling = True) 17-03-17 19:08:55.678 -07 000000610 INF: Z Motor: Moving to -0.171028 mm, started at -0.171852 mm, distance = 0.82 um 17-03-17 19:08:55.678 -07 000000610 INF: FPGA: Xmit ZDACW 37361\n [Z Motor] 17-03-17 19:08:55.678 -07 000000502 INF: FPGA: Recv ZDACW 17-03-17 19:08:55.688 -07 000000610 INF: FPGA: 'ZDACW 37361' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:08:55.688 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:55.688 -07 000000429 INF: FPGA: Recv ZDACR 37361 17-03-17 19:08:55.698 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.698 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:08:55.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.848 -07 000000593 INF: FPGA: Recv ZSGSRD 35915 17-03-17 19:08:55.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:55.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.858 -07 000000429 INF: FPGA: Recv ZSGSRD 35913 17-03-17 19:08:55.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.868 -07 000000502 INF: FPGA: Recv ZSGSRD 35915 17-03-17 19:08:55.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.878 -07 000000618 INF: FPGA: Recv ZSGSRD 35914 17-03-17 19:08:55.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.888 -07 000000502 INF: FPGA: Recv ZSGSRD 35920 17-03-17 19:08:55.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.898 -07 000000429 INF: FPGA: Recv ZSGSRD 35918 17-03-17 19:08:55.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.908 -07 000000502 INF: FPGA: Recv ZSGSRD 35910 17-03-17 19:08:55.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.918 -07 000000429 INF: FPGA: Recv ZSGSRD 35911 17-03-17 19:08:55.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.928 -07 000000569 INF: FPGA: Recv ZSGSRD 35911 17-03-17 19:08:55.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:55.938 -07 000000448 INF: FPGA: Recv ZSGSRD 35912 17-03-17 19:08:55.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.948 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:55.948 -07 000000569 INF: FPGA: Recv ZPIEZORD 31872 17-03-17 19:08:55.958 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:55.958 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.701 V. Piezo Error = -8.9 V. 17-03-17 19:08:55.958 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.0 um, Read 10 ADC samples: Avg = 35914 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35914 (-170.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35910 (-170.1 uncal um), Max = 35920 (-170.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-17 19:08:55.958 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35914, posNoise = 6, negNoise = 4 17-03-17 19:08:55.958 -07 000000610 INF: Z Motor: After move to -0.171028, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:55.958 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-17 19:08:55.958 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:08:55.958 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:08:55.958 -07 000000448 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:08:55.958 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:08:55.958 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:08:55.958 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:08:55.958 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:08:55.958 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:08:55.958 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:08:55.958 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:08:55.958 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:08:55.958 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:08:55.968 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-17 19:08:55.968 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:08:55.968 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 5 ms. 17-03-17 19:08:55.968 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:08:55.978 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:08:55.978 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:08:55.978 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-17 19:08:55.978 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:08:55.988 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37538 150\n [Camera] 17-03-17 19:08:56.188 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:08:56.588 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:08:56.588 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:08:56.588 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:56.588 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:56.588 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1064702000, 0x0, 391868352) start. 17-03-17 19:08:56.588 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:08:56.588 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:08:56.588 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:56.698 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:08:56.698 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:08:56.708 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:56.708 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start. 17-03-17 19:08:56.778 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37538 783 17-03-17 19:08:56.928 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:08:56.968 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1064702000, 0x0, 391868352) end. Duration was 385 ms. 17-03-17 19:08:56.968 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-17 19:08:56.968 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:56.978 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:08:56.978 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-17 19:08:57.078 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 370 ms. 17-03-17 19:08:57.078 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-17 19:08:57.078 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:57.078 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:08:57.088 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 498 ms. 17-03-17 19:08:57.118 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:08:57.118 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:08:57.118 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:08:57.118 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:08:57.118 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:08:57.118 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:08:57.118 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:08:57.118 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-17 19:08:57.128 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:08:57.128 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-17 19:08:57.308 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:08:57.308 -07 000000618 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:08:57.308 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37538 150' command took 2 ms to send, 1315 ms to get response, and 1323 ms overall 17-03-17 19:08:57.308 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-17 19:08:57.308 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.0576171875, Z-Position -0.171042506870338. ------ 17-03-17 19:08:57.318 -07 000000627 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17760 mm 17-03-17 19:08:57.318 -07 000000627 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:08:57.318 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:08:57.318 -07 000000476 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True) 17-03-17 19:08:57.318 -07 000000476 INF: Y Motor: Moving to 64.8926 mm, started at 64.0576 mm, delta = 0.8350 mm 17-03-17 19:08:57.318 -07 000000618 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:08:57.318 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 38797, sync = True, waitForSettling = False) 17-03-17 19:08:57.318 -07 000000561 INF: Z Motor: Moving to -0.177601 mm, started at -0.171043 mm, distance = -6.56 um 17-03-17 19:08:57.328 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 2 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:08:57.328 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:57.328 -07 000000618 INF: FPGA: Recv YRDPOS 131190 17-03-17 19:08:57.338 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-17 19:08:57.338 -07 000000476 INF: Y Motor: Encoder = 131190 = motor step 102492.2 = 64.0576 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:57.338 -07 000000561 INF: FPGA: Xmit ZDACW 38797\n [Z Motor] 17-03-17 19:08:57.338 -07 000000476 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:08:57.338 -07 000000476 INF: Y Motor: Moving 1336 steps-10 17-03-17 19:08:57.338 -07 000000478 INF: FPGA: Recv ZDACW 17-03-17 19:08:57.348 -07 000000482 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:08:57.348 -07 000000561 INF: FPGA: 'ZDACW 38797' command took 0 ms to send, 0 ms to get response, and 21 ms overall 17-03-17 19:08:57.358 -07 000000476 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:08:57.368 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:57.368 -07 000000502 INF: FPGA: Recv ZDACR 38797 17-03-17 19:08:57.378 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-17 19:08:57.378 -07 000000561 INF: Z Motor: MoveAbsStepped took 51 ms (did NOT wait for settling yet)) 17-03-17 19:08:57.498 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 377 ms. 17-03-17 19:08:57.498 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-17 19:08:57.498 -07 000000448 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:57.498 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 374 ms. 17-03-17 19:08:57.498 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms. 17-03-17 19:08:57.498 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:57.508 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:08:57.508 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-17 19:08:57.508 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:08:57.508 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-17 19:08:57.548 -07 000000502 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:08:57.548 -07 000000482 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall 17-03-17 19:08:57.728 -07 000000561 INF: FPGA: Recv YMVTILE 17-03-17 19:08:57.728 -07 000000476 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-17 19:08:57.778 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:57.778 -07 000000569 INF: FPGA: Recv YRDPOS 132873 17-03-17 19:08:57.788 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:08:57.788 -07 000000476 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:57.788 -07 000000476 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm) 17-03-17 19:08:57.788 -07 000000476 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.835 mm, average velocity = 2.103 mm/sec 17-03-17 19:08:58.738 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:08:58.738 -07 000000569 INF: FPGA: Recv YRDPOS 132874 17-03-17 19:08:58.748 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:58.748 -07 000000476 INF: Y Motor: Encoder = 132874 = motor step 103807.8 = 64.8799 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:08:58.768 -07 000000476 INF: Y Motor: After move to 64.892609, error = -0.012726, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:08:58.768 -07 000000476 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 1 counts (0.000 mm) 17-03-17 19:08:58.768 -07 000000476 INF: Y Motor: Moved to 64.8799 after 1444 ms (table move) 17-03-17 19:08:58.768 -07 000000627 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177601 mm (DAC = 38797) 17-03-17 19:08:58.768 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:58.768 -07 000000569 INF: FPGA: Recv ZSGSRD 36937 17-03-17 19:08:58.778 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:08:58.778 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:58.778 -07 000000429 INF: FPGA: Recv ZSGSRD 36933 17-03-17 19:08:58.788 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:58.788 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:58.788 -07 000000429 INF: FPGA: Recv ZSGSRD 36939 17-03-17 19:08:58.798 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:58.798 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:58.798 -07 000000429 INF: FPGA: Recv ZSGSRD 36934 17-03-17 19:08:58.808 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:58.808 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:58.808 -07 000000429 INF: FPGA: Recv ZSGSRD 36939 17-03-17 19:08:58.818 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:58.818 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:58.818 -07 000000476 INF: FPGA: Recv ZSGSRD 36936 17-03-17 19:08:58.828 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:58.828 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:58.828 -07 000000429 INF: FPGA: Recv ZSGSRD 36940 17-03-17 19:08:58.838 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:58.838 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:58.838 -07 000000476 INF: FPGA: Recv ZSGSRD 36935 17-03-17 19:08:58.848 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:58.848 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:58.848 -07 000000569 INF: FPGA: Recv ZSGSRD 36936 17-03-17 19:08:58.858 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:58.858 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:58.858 -07 000000476 INF: FPGA: Recv ZSGSRD 36935 17-03-17 19:08:58.868 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:58.868 -07 000000627 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:58.868 -07 000000429 INF: FPGA: Recv ZPIEZORD 33271 17-03-17 19:08:58.878 -07 000000627 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:58.878 -07 000000627 INF: Z Motor: Piezo is near 51.1 V (nominally 0 to 100 V), expect near 59.2 V, since DAC is at 5.920 V. Piezo Error = -8.1 V. 17-03-17 19:08:58.878 -07 000000627 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.6 um, Read 10 ADC samples: Avg = 36936 (-176.7 uncal um), Error = 0.9 uncal um, Median = 36936 (-176.7 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 36933 (-176.7 uncal um), Max = 36940 (-176.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-17 19:08:58.878 -07 000000627 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36936, posNoise = 4, negNoise = 3 17-03-17 19:08:58.878 -07 000000627 INF: Z Motor: After move to -0.177601, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:58.878 -07 000000627 INF: Z Motor: Settle wait time = 1446 ms, measure time = 106 ms (allowed 150 ms), total time = 1552 ms 17-03-17 19:08:58.878 -07 000000627 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-17 19:08:58.928 -07 000000627 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms 17-03-17 19:08:58.928 -07 000000627 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:08:58.928 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:08:58.928 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:08:58.928 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:08:58.928 -07 000000476 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:08:58.928 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:08:58.928 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:08:58.928 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:08:58.928 -07 000000476 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:08:58.938 -07 000000476 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms. 17-03-17 19:08:58.938 -07 000000476 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:08:58.948 -07 000000476 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms. 17-03-17 19:08:58.948 -07 000000476 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms. 17-03-17 19:08:58.948 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:08:58.998 -07 000000627 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:08:59.198 -07 000000429 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:08:59.198 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:08:59.198 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:08:59.198 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2486767776, 0x0, 559484976) start. 17-03-17 19:08:59.238 -07 000000476 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:08:59.238 -07 000000429 INF: FPGA: Recv CAMSNAP 17-03-17 19:08:59.238 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 285 ms overall 17-03-17 19:08:59.328 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2486767776, 0x0, 559484976) end. Duration was 125 ms. 17-03-17 19:08:59.328 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:08:59.328 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-17 19:08:59.328 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms. 17-03-17 19:08:59.338 -07 000000476 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:08:59.338 -07 000000502 INF: Autofocus start 17-03-17 19:08:59.338 -07 000000502 INF: MeasureProfile start 17-03-17 19:08:59.338 -07 000000627 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:08:59.348 -07 000000476 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:08:59.348 -07 000000476 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:08:59.348 -07 000000502 INF: MeasureProfile done 17-03-17 19:08:59.348 -07 000000502 INF: X=-48 Z correction [um]=-0.3191189 17-03-17 19:08:59.348 -07 000000502 INF: Autofocus finished 17-03-17 19:08:59.548 -07 000000569 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:08:59.548 -07 000000476 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 203 ms overall 17-03-17 19:08:59.548 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.8798828125, Z-position -0.177608051679218. ---------- 17-03-17 19:08:59.548 -07 000000610 INF: Cycle 22 Tile 7 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:08:59.558 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37240, sync = True, waitForSettling = True) 17-03-17 19:08:59.558 -07 000000610 INF: Z Motor: Moving to -0.170474 mm, started at -0.177608 mm, distance = 7.13 um 17-03-17 19:08:59.558 -07 000000610 INF: FPGA: Xmit ZDACW 37240\n [Z Motor] 17-03-17 19:08:59.558 -07 000000476 INF: FPGA: Recv ZDACW 17-03-17 19:08:59.568 -07 000000610 INF: FPGA: 'ZDACW 37240' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:59.568 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:08:59.568 -07 000000502 INF: FPGA: Recv ZDACR 37240 17-03-17 19:08:59.578 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:59.578 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:08:59.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:59.728 -07 000000569 INF: FPGA: Recv ZSGSRD 35830 17-03-17 19:08:59.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:08:59.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:59.738 -07 000000627 INF: FPGA: Recv ZSGSRD 35829 17-03-17 19:08:59.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:59.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:59.748 -07 000000429 INF: FPGA: Recv ZSGSRD 35822 17-03-17 19:08:59.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:59.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:59.758 -07 000000476 INF: FPGA: Recv ZSGSRD 35825 17-03-17 19:08:59.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:59.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:59.768 -07 000000429 INF: FPGA: Recv ZSGSRD 35830 17-03-17 19:08:59.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:59.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:59.788 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.031682, 17-03-17 19:08:59.788 -07 000000429 INF: FPGA: Recv ZSGSRD 35827 17-03-17 19:08:59.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:08:59.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:59.798 -07 000000476 INF: FPGA: Recv ZSGSRD 35826 17-03-17 19:08:59.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:59.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:59.818 -07 000000618 INF: FPGA: Recv ZSGSRD 35830 17-03-17 19:08:59.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:08:59.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:59.848 -07 000000429 INF: FPGA: Recv ZSGSRD 35828 17-03-17 19:08:59.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 28 ms overall 17-03-17 19:08:59.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:08:59.858 -07 000000593 INF: FPGA: Recv ZSGSRD 35827 17-03-17 19:08:59.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:08:59.878 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:08:59.878 -07 000000593 INF: FPGA: Recv ZPIEZORD 31791 17-03-17 19:08:59.888 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:08:59.888 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.682 V. Piezo Error = -8.9 V. 17-03-17 19:08:59.888 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35827 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35828 (-169.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35822 (-169.6 uncal um), Max = 35830 (-169.6 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:08:59.888 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35827, posNoise = 3, negNoise = 5 17-03-17 19:08:59.888 -07 000000610 INF: Z Motor: After move to -0.170474, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:08:59.888 -07 000000610 INF: Z Motor: MoveAbsStepped took 330 ms) 17-03-17 19:08:59.888 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:08:59.888 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:08:59.888 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:08:59.888 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:08:59.888 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:08:59.888 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:08:59.888 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:08:59.888 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:08:59.888 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:08:59.888 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:08:59.888 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:08:59.888 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:08:59.888 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:08:59.888 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:08:59.888 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:08:59.888 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:08:59.898 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-17 19:08:59.898 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-17 19:08:59.898 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-17 19:08:59.898 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-17 19:08:59.908 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37417 150\n [Camera] 17-03-17 19:09:00.108 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:00.508 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:00.508 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:00.508 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:00.508 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:00.508 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:00.508 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:00.618 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:00.618 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-17 19:09:00.618 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:00.618 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-17 19:09:00.698 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37417 783 17-03-17 19:09:00.848 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:00.988 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 372 ms. 17-03-17 19:09:00.988 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-17 19:09:00.988 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:00.998 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 379 ms. 17-03-17 19:09:00.998 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-17 19:09:00.998 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:00.998 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:00.998 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:00.998 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 494 ms. 17-03-17 19:09:01.008 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 496 ms. 17-03-17 19:09:01.038 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:01.038 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:01.038 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:01.038 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:01.048 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:01.048 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:01.048 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:01.048 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-17 19:09:01.048 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:01.048 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-17 19:09:01.228 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:09:01.228 -07 000000502 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:01.228 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37417 150' command took 2 ms to send, 1315 ms to get response, and 1323 ms overall 17-03-17 19:09:01.228 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.171040 17-03-17 19:09:01.228 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17104 mm 17-03-17 19:09:01.228 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:01.238 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True) 17-03-17 19:09:01.238 -07 000000429 INF: Y Motor: Moving to 65.7226 mm, started at 64.8799 mm, delta = 0.8427 mm 17-03-17 19:09:01.238 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:01.238 -07 000000478 INF: Z Motor: Entering MoveAbsStepped (DAC = 37364, sync = True, waitForSettling = False) 17-03-17 19:09:01.238 -07 000000478 INF: Z Motor: Moving to -0.171041 mm, started at -0.170484 mm, distance = -0.56 um 17-03-17 19:09:01.238 -07 000000627 INF: FPGA: Recv YRDPOS 132874 17-03-17 19:09:01.248 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 11 ms overall 17-03-17 19:09:01.248 -07 000000429 INF: Y Motor: Encoder = 132874 = motor step 103807.8 = 64.8799 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:01.248 -07 000000429 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:01.248 -07 000000429 INF: Y Motor: Moving 1348 steps-27 17-03-17 19:09:01.248 -07 000000478 INF: FPGA: Xmit ZDACW 37364\n [Z Motor] 17-03-17 19:09:01.248 -07 000000569 INF: FPGA: Recv ZDACW 17-03-17 19:09:01.258 -07 000000478 INF: FPGA: 'ZDACW 37364' command took 1 ms to send, 0 ms to get response, and 18 ms overall 17-03-17 19:09:01.258 -07 000000478 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:01.258 -07 000000627 INF: FPGA: Recv ZDACR 37364 17-03-17 19:09:01.268 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:01.268 -07 000000478 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:01.268 -07 000000478 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet)) 17-03-17 19:09:01.428 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 377 ms. 17-03-17 19:09:01.428 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms. 17-03-17 19:09:01.428 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:01.428 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 379 ms. 17-03-17 19:09:01.428 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-17 19:09:01.428 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:01.438 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:01.438 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms. 17-03-17 19:09:01.438 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:01.448 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-17 19:09:01.638 -07 000000462 INF: FPGA: Recv YMVTILE 17-03-17 19:09:01.638 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 396 ms overall 17-03-17 19:09:01.658 -07 000000593 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:01.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:01.678 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:01.678 -07 000000448 INF: FPGA: Recv YRDPOS 134584 17-03-17 19:09:01.688 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:09:01.688 -07 000000429 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:01.688 -07 000000429 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm) 17-03-17 19:09:01.688 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.123 mm/sec 17-03-17 19:09:02.638 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:02.638 -07 000000593 INF: FPGA: Recv YRDPOS 134584 17-03-17 19:09:02.648 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:02.648 -07 000000429 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:02.668 -07 000000429 INF: Y Motor: After move to 65.722610, error = -0.007767, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:02.668 -07 000000429 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:09:02.668 -07 000000429 INF: Y Motor: Moved to 65.7148 after 1429 ms (table move) 17-03-17 19:09:02.668 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171041 mm (DAC = 37364) 17-03-17 19:09:02.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:02.668 -07 000000462 INF: FPGA: Recv ZSGSRD 35917 17-03-17 19:09:02.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:09:02.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:02.678 -07 000000462 INF: FPGA: Recv ZSGSRD 35918 17-03-17 19:09:02.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:02.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:02.688 -07 000000462 INF: FPGA: Recv ZSGSRD 35917 17-03-17 19:09:02.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:02.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:02.698 -07 000000593 INF: FPGA: Recv ZSGSRD 35904 17-03-17 19:09:02.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:02.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:02.708 -07 000000462 INF: FPGA: Recv ZSGSRD 35920 17-03-17 19:09:02.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:02.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:02.718 -07 000000429 INF: FPGA: Recv ZSGSRD 35920 17-03-17 19:09:02.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:02.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:02.728 -07 000000593 INF: FPGA: Recv ZSGSRD 35913 17-03-17 19:09:02.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:02.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:02.738 -07 000000429 INF: FPGA: Recv ZSGSRD 35913 17-03-17 19:09:02.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:02.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:02.748 -07 000000593 INF: FPGA: Recv ZSGSRD 35914 17-03-17 19:09:02.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:02.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:02.758 -07 000000429 INF: FPGA: Recv ZSGSRD 35914 17-03-17 19:09:02.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:02.768 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:02.768 -07 000000462 INF: FPGA: Recv ZPIEZORD 31925 17-03-17 19:09:02.778 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:02.778 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.701 V. Piezo Error = -8.8 V. 17-03-17 19:09:02.778 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.0 um, Read 10 ADC samples: Avg = 35915 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35916 (-170.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35904 (-170.1 uncal um), Max = 35920 (-170.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um) 17-03-17 19:09:02.778 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35915, posNoise = 5, negNoise = 11 17-03-17 19:09:02.778 -07 000000610 INF: Z Motor: After move to -0.171041, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:02.778 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 108 ms (allowed 150 ms), total time = 1539 ms 17-03-17 19:09:02.778 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:02.828 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1591 ms 17-03-17 19:09:02.828 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:02.828 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71484375, Z-position -0.17104893108248. ---------- 17-03-17 19:09:02.828 -07 000000610 INF: Cycle 22 Tile 8 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:02.828 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37187, sync = True, waitForSettling = True) 17-03-17 19:09:02.828 -07 000000610 INF: Z Motor: Moving to -0.170231 mm, started at -0.171049 mm, distance = 0.82 um 17-03-17 19:09:02.828 -07 000000610 INF: FPGA: Xmit ZDACW 37187\n [Z Motor] 17-03-17 19:09:02.828 -07 000000429 INF: FPGA: Recv ZDACW 17-03-17 19:09:02.838 -07 000000610 INF: FPGA: 'ZDACW 37187' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:09:02.838 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:02.838 -07 000000593 INF: FPGA: Recv ZDACR 37187 17-03-17 19:09:02.848 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:02.848 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:02.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:02.998 -07 000000462 INF: FPGA: Recv ZSGSRD 35790 17-03-17 19:09:03.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:03.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:03.018 -07 000000476 INF: FPGA: Recv ZSGSRD 35791 17-03-17 19:09:03.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:03.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:03.028 -07 000000429 INF: FPGA: Recv ZSGSRD 35785 17-03-17 19:09:03.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:03.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:03.038 -07 000000593 INF: FPGA: Recv ZSGSRD 35794 17-03-17 19:09:03.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:03.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:03.048 -07 000000429 INF: FPGA: Recv ZSGSRD 35789 17-03-17 19:09:03.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:03.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:03.058 -07 000000476 INF: FPGA: Recv ZSGSRD 35781 17-03-17 19:09:03.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:03.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:03.068 -07 000000462 INF: FPGA: Recv ZSGSRD 35792 17-03-17 19:09:03.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:03.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:03.078 -07 000000476 INF: FPGA: Recv ZSGSRD 35789 17-03-17 19:09:03.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:03.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:03.088 -07 000000429 INF: FPGA: Recv ZSGSRD 35792 17-03-17 19:09:03.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:03.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:03.098 -07 000000476 INF: FPGA: Recv ZSGSRD 35784 17-03-17 19:09:03.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:09:03.108 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:03.108 -07 000000561 INF: FPGA: Recv ZPIEZORD 31770 17-03-17 19:09:03.118 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:03.118 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.674 V. Piezo Error = -8.9 V. 17-03-17 19:09:03.118 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.2 um, Read 10 ADC samples: Avg = 35789 (-169.4 uncal um), Error = 0.9 uncal um, Median = 35790 (-169.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35781 (-169.3 uncal um), Max = 35794 (-169.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-17 19:09:03.118 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35789, posNoise = 5, negNoise = 8 17-03-17 19:09:03.118 -07 000000610 INF: Z Motor: After move to -0.170231, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:03.118 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms) 17-03-17 19:09:03.118 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:03.118 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:03.118 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:03.118 -07 000000476 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:03.118 -07 000000593 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:03.118 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:03.118 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:03.118 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:03.118 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:03.118 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:03.118 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-17 19:09:03.118 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:03.118 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:03.118 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:03.118 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:09:03.128 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:03.138 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-17 19:09:03.138 -07 000000593 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:09:03.138 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-17 19:09:03.138 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:09:03.138 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37364 150\n [Camera] 17-03-17 19:09:03.348 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:03.738 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:03.738 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:03.738 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:03.748 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:03.748 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:03.748 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start. 17-03-17 19:09:03.748 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:03.748 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:03.748 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:03.748 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start. 17-03-17 19:09:03.928 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37364 783 17-03-17 19:09:04.078 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:04.118 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 372 ms. 17-03-17 19:09:04.118 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-17 19:09:04.118 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:04.118 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 368 ms. 17-03-17 19:09:04.118 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms. 17-03-17 19:09:04.118 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:04.128 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:04.128 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-17 19:09:04.128 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:04.128 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms. 17-03-17 19:09:04.268 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:04.268 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:04.278 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:04.278 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:04.278 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-17 19:09:04.278 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:04.278 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:04.278 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:04.278 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:04.278 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) start. 17-03-17 19:09:04.468 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:09:04.468 -07 000000382 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:04.468 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37364 150' command took 2 ms to send, 1311 ms to get response, and 1323 ms overall 17-03-17 19:09:04.468 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.170507 17-03-17 19:09:04.468 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.17051 mm 17-03-17 19:09:04.468 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:04.578 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True) 17-03-17 19:09:04.578 -07 000000382 INF: Y Motor: Moving to 66.5526 mm, started at 65.7148 mm, delta = 0.8378 mm 17-03-17 19:09:04.578 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:04.578 -07 000000593 INF: Z Motor: Entering MoveAbsStepped (DAC = 37247, sync = True, waitForSettling = False) 17-03-17 19:09:04.578 -07 000000593 INF: Z Motor: Moving to -0.170506 mm, started at -0.170239 mm, distance = -0.27 um 17-03-17 19:09:04.578 -07 000000424 INF: FPGA: Recv YRDPOS 134584 17-03-17 19:09:04.588 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:09:04.588 -07 000000382 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:04.588 -07 000000382 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:04.588 -07 000000593 INF: FPGA: Xmit ZDACW 37247\n [Z Motor] 17-03-17 19:09:04.588 -07 000000382 INF: Y Motor: Moving 1340 steps-16 17-03-17 19:09:04.588 -07 000000424 INF: FPGA: Recv ZDACW 17-03-17 19:09:04.598 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:04.598 -07 000000593 INF: FPGA: 'ZDACW 37247' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-17 19:09:04.608 -07 000000593 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:04.608 -07 000000482 INF: FPGA: Recv ZDACR 37247 17-03-17 19:09:04.618 -07 000000593 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:04.618 -07 000000593 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet)) 17-03-17 19:09:04.658 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 383 ms. 17-03-17 19:09:04.658 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-17 19:09:04.658 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:04.658 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) end. Duration was 380 ms. 17-03-17 19:09:04.658 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms. 17-03-17 19:09:04.658 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:04.668 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:04.668 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-17 19:09:04.668 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:04.668 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-17 19:09:04.978 -07 000000569 INF: FPGA: Recv YMVTILE 17-03-17 19:09:04.978 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 390 ms overall 17-03-17 19:09:05.008 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:05.008 -07 000000569 INF: FPGA: Recv YRDPOS 136274 17-03-17 19:09:05.018 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:09:05.018 -07 000000382 INF: Y Motor: Encoder = 136274 = motor step 106464.1 = 66.5400 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:05.018 -07 000000382 INF: Y Motor: Position error before settling (table move) = -26 encoder counts (-0.013 mm) 17-03-17 19:09:05.018 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.838 mm, average velocity = 2.148 mm/sec 17-03-17 19:09:05.198 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.011254, 17-03-17 19:09:05.968 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:05.968 -07 000000561 INF: FPGA: Recv YRDPOS 136274 17-03-17 19:09:05.978 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:05.978 -07 000000382 INF: Y Motor: Encoder = 136274 = motor step 106464.1 = 66.5400 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:05.998 -07 000000382 INF: Y Motor: After move to 66.552605, error = -0.012566, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:05.998 -07 000000382 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:09:05.998 -07 000000382 INF: Y Motor: Moved to 66.5400 after 1414 ms (table move) 17-03-17 19:09:05.998 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170506 mm (DAC = 37247) 17-03-17 19:09:05.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:05.998 -07 000000429 INF: FPGA: Recv ZSGSRD 35835 17-03-17 19:09:06.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:09:06.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.008 -07 000000382 INF: FPGA: Recv ZSGSRD 35837 17-03-17 19:09:06.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.018 -07 000000429 INF: FPGA: Recv ZSGSRD 35829 17-03-17 19:09:06.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.028 -07 000000382 INF: FPGA: Recv ZSGSRD 35833 17-03-17 19:09:06.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.038 -07 000000476 INF: FPGA: Recv ZSGSRD 35829 17-03-17 19:09:06.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.048 -07 000000382 INF: FPGA: Recv ZSGSRD 35827 17-03-17 19:09:06.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.058 -07 000000561 INF: FPGA: Recv ZSGSRD 35835 17-03-17 19:09:06.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.068 -07 000000382 INF: FPGA: Recv ZSGSRD 35837 17-03-17 19:09:06.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.078 -07 000000593 INF: FPGA: Recv ZSGSRD 35838 17-03-17 19:09:06.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.088 -07 000000429 INF: FPGA: Recv ZSGSRD 35836 17-03-17 19:09:06.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.098 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:06.098 -07 000000429 INF: FPGA: Recv ZPIEZORD 31805 17-03-17 19:09:06.108 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.108 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.684 V. Piezo Error = -8.9 V. 17-03-17 19:09:06.108 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35834 (-169.7 uncal um), Error = 0.9 uncal um, Median = 35835 (-169.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35827 (-169.6 uncal um), Max = 35838 (-169.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-17 19:09:06.108 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35834, posNoise = 4, negNoise = 7 17-03-17 19:09:06.108 -07 000000610 INF: Z Motor: After move to -0.170506, error = -0.000023, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:06.108 -07 000000610 INF: Z Motor: Settle wait time = 1417 ms, measure time = 106 ms (allowed 150 ms), total time = 1523 ms 17-03-17 19:09:06.108 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:06.158 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1684 ms 17-03-17 19:09:06.158 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:06.158 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5400390625, Z-position -0.170528569898997. ---------- 17-03-17 19:09:06.158 -07 000000610 INF: Cycle 22 Tile 9 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:06.158 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37070, sync = True, waitForSettling = True) 17-03-17 19:09:06.158 -07 000000610 INF: Z Motor: Moving to -0.169696 mm, started at -0.170529 mm, distance = 0.83 um 17-03-17 19:09:06.158 -07 000000610 INF: FPGA: Xmit ZDACW 37070\n [Z Motor] 17-03-17 19:09:06.158 -07 000000593 INF: FPGA: Recv ZDACW 17-03-17 19:09:06.168 -07 000000610 INF: FPGA: 'ZDACW 37070' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:09:06.168 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:06.168 -07 000000429 INF: FPGA: Recv ZDACR 37070 17-03-17 19:09:06.178 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.178 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:06.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.328 -07 000000429 INF: FPGA: Recv ZSGSRD 35702 17-03-17 19:09:06.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:06.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.338 -07 000000429 INF: FPGA: Recv ZSGSRD 35707 17-03-17 19:09:06.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.348 -07 000000429 INF: FPGA: Recv ZSGSRD 35710 17-03-17 19:09:06.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.358 -07 000000462 INF: FPGA: Recv ZSGSRD 35706 17-03-17 19:09:06.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.368 -07 000000593 INF: FPGA: Recv ZSGSRD 35704 17-03-17 19:09:06.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.378 -07 000000462 INF: FPGA: Recv ZSGSRD 35707 17-03-17 19:09:06.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.388 -07 000000462 INF: FPGA: Recv ZSGSRD 35710 17-03-17 19:09:06.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.398 -07 000000462 INF: FPGA: Recv ZSGSRD 35699 17-03-17 19:09:06.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.408 -07 000000429 INF: FPGA: Recv ZSGSRD 35704 17-03-17 19:09:06.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:06.418 -07 000000429 INF: FPGA: Recv ZSGSRD 35701 17-03-17 19:09:06.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.428 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:06.428 -07 000000429 INF: FPGA: Recv ZPIEZORD 31683 17-03-17 19:09:06.438 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:06.438 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.657 V. Piezo Error = -8.9 V. 17-03-17 19:09:06.438 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.7 um, Read 10 ADC samples: Avg = 35705 (-168.8 uncal um), Error = 0.9 uncal um, Median = 35705 (-168.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35699 (-168.8 uncal um), Max = 35710 (-168.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:09:06.438 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35705, posNoise = 5, negNoise = 6 17-03-17 19:09:06.438 -07 000000610 INF: Z Motor: After move to -0.169696, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:06.438 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-17 19:09:06.438 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:06.438 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:06.438 -07 000000593 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:06.438 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:06.438 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:06.438 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:06.438 -07 000000593 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:06.448 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:06.448 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:06.448 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:06.448 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 3 ms. 17-03-17 19:09:06.448 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:06.448 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:09:06.448 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:06.448 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-17 19:09:06.448 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:06.458 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-17 19:09:06.458 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:09:06.468 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-17 19:09:06.468 -07 000000593 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:09:06.468 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37247 150\n [Camera] 17-03-17 19:09:06.658 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:06.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:06.668 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:07.068 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:07.068 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:07.068 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:07.068 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:07.068 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:07.068 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:07.068 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:07.068 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-17 19:09:07.068 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:07.068 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:09:07.258 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37247 783 17-03-17 19:09:07.408 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:07.438 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 367 ms. 17-03-17 19:09:07.438 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms. 17-03-17 19:09:07.438 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:07.438 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 372 ms. 17-03-17 19:09:07.438 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms. 17-03-17 19:09:07.438 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:07.448 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:07.448 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:07.448 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-17 19:09:07.458 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-17 19:09:07.598 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:07.598 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:07.598 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:07.598 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:07.598 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:07.608 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:07.608 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:07.608 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start. 17-03-17 19:09:07.608 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:07.608 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start. 17-03-17 19:09:07.788 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:09:07.788 -07 000000448 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:07.788 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37247 150' command took 2 ms to send, 1315 ms to get response, and 1324 ms overall 17-03-17 19:09:07.788 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.170501 17-03-17 19:09:07.788 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17050 mm 17-03-17 19:09:07.788 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:07.798 -07 000000478 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True) 17-03-17 19:09:07.798 -07 000000478 INF: Y Motor: Moving to 67.3826 mm, started at 66.5400 mm, delta = 0.8426 mm 17-03-17 19:09:07.798 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:07.798 -07 000000627 INF: Z Motor: Entering MoveAbsStepped (DAC = 37246, sync = True, waitForSettling = False) 17-03-17 19:09:07.798 -07 000000627 INF: Z Motor: Moving to -0.170501 mm, started at -0.169700 mm, distance = -0.80 um 17-03-17 19:09:07.798 -07 000000462 INF: FPGA: Recv YRDPOS 136274 17-03-17 19:09:07.808 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:07.808 -07 000000478 INF: Y Motor: Encoder = 136274 = motor step 106464.1 = 66.5400 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:07.808 -07 000000478 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:07.808 -07 000000478 INF: Y Motor: Moving 1348 steps-26 17-03-17 19:09:07.808 -07 000000627 INF: FPGA: Xmit ZDACW 37246\n [Z Motor] 17-03-17 19:09:07.808 -07 000000462 INF: FPGA: Recv ZDACW 17-03-17 19:09:07.818 -07 000000627 INF: FPGA: 'ZDACW 37246' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:07.818 -07 000000478 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:07.828 -07 000000627 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:07.828 -07 000000429 INF: FPGA: Recv ZDACR 37246 17-03-17 19:09:07.838 -07 000000627 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:07.838 -07 000000627 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet)) 17-03-17 19:09:07.988 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 384 ms. 17-03-17 19:09:07.988 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-17 19:09:07.988 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:07.998 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:07.998 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-17 19:09:07.998 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 384 ms. 17-03-17 19:09:07.998 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-17 19:09:07.998 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:07.998 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:08.018 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms. 17-03-17 19:09:08.188 -07 000000462 INF: FPGA: Recv YMVTILE 17-03-17 19:09:08.188 -07 000000478 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-17 19:09:08.228 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:08.228 -07 000000593 INF: FPGA: Recv YRDPOS 137979 17-03-17 19:09:08.238 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:09:08.238 -07 000000478 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:08.238 -07 000000478 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm) 17-03-17 19:09:08.238 -07 000000478 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.843 mm, average velocity = 2.172 mm/sec 17-03-17 19:09:09.188 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:09.188 -07 000000476 INF: FPGA: Recv YRDPOS 137980 17-03-17 19:09:09.198 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:09.198 -07 000000478 INF: Y Motor: Encoder = 137980 = motor step 107796.9 = 67.3730 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:09.218 -07 000000478 INF: Y Motor: After move to 67.382607, error = -0.009560, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:09.218 -07 000000478 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 1 counts (0.000 mm) 17-03-17 19:09:09.218 -07 000000478 INF: Y Motor: Moved to 67.3730 after 1421 ms (table move) 17-03-17 19:09:09.218 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170501 mm (DAC = 37246) 17-03-17 19:09:09.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.218 -07 000000478 INF: FPGA: Recv ZSGSRD 35837 17-03-17 19:09:09.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:09:09.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.228 -07 000000593 INF: FPGA: Recv ZSGSRD 35832 17-03-17 19:09:09.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.238 -07 000000593 INF: FPGA: Recv ZSGSRD 35830 17-03-17 19:09:09.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.258 -07 000000462 INF: FPGA: Recv ZSGSRD 35836 17-03-17 19:09:09.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.268 -07 000000462 INF: FPGA: Recv ZSGSRD 35836 17-03-17 19:09:09.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.278 -07 000000627 INF: FPGA: Recv ZSGSRD 35830 17-03-17 19:09:09.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.288 -07 000000618 INF: FPGA: Recv ZSGSRD 35830 17-03-17 19:09:09.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.298 -07 000000618 INF: FPGA: Recv ZSGSRD 35828 17-03-17 19:09:09.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.308 -07 000000618 INF: FPGA: Recv ZSGSRD 35831 17-03-17 19:09:09.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.318 -07 000000618 INF: FPGA: Recv ZSGSRD 35834 17-03-17 19:09:09.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.328 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:09.328 -07 000000462 INF: FPGA: Recv ZPIEZORD 31850 17-03-17 19:09:09.338 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.338 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.683 V. Piezo Error = -8.8 V. 17-03-17 19:09:09.338 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35832 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35832 (-169.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35828 (-169.6 uncal um), Max = 35837 (-169.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-17 19:09:09.338 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35832, posNoise = 5, negNoise = 4 17-03-17 19:09:09.338 -07 000000610 INF: Z Motor: After move to -0.170501, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:09.338 -07 000000610 INF: Z Motor: Settle wait time = 1423 ms, measure time = 116 ms (allowed 150 ms), total time = 1539 ms 17-03-17 19:09:09.338 -07 000000610 INF: Z Motor: Waiting extra 34 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:09.378 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1581 ms 17-03-17 19:09:09.378 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:09.378 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.373046875, Z-position -0.170515721474714. ---------- 17-03-17 19:09:09.378 -07 000000610 INF: Cycle 22 Tile 10 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:09.378 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37069, sync = True, waitForSettling = True) 17-03-17 19:09:09.378 -07 000000610 INF: Z Motor: Moving to -0.169691 mm, started at -0.170516 mm, distance = 0.82 um 17-03-17 19:09:09.378 -07 000000610 INF: FPGA: Xmit ZDACW 37069\n [Z Motor] 17-03-17 19:09:09.378 -07 000000618 INF: FPGA: Recv ZDACW 17-03-17 19:09:09.388 -07 000000610 INF: FPGA: 'ZDACW 37069' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:09:09.388 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:09.388 -07 000000618 INF: FPGA: Recv ZDACR 37069 17-03-17 19:09:09.398 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.398 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:09.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.548 -07 000000618 INF: FPGA: Recv ZSGSRD 35713 17-03-17 19:09:09.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:09.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.558 -07 000000618 INF: FPGA: Recv ZSGSRD 35706 17-03-17 19:09:09.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.568 -07 000000476 INF: FPGA: Recv ZSGSRD 35706 17-03-17 19:09:09.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.578 -07 000000462 INF: FPGA: Recv ZSGSRD 35706 17-03-17 19:09:09.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.588 -07 000000569 INF: FPGA: Recv ZSGSRD 35707 17-03-17 19:09:09.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.598 -07 000000424 INF: FPGA: Recv ZSGSRD 35707 17-03-17 19:09:09.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.608 -07 000000618 INF: FPGA: Recv ZSGSRD 35703 17-03-17 19:09:09.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.618 -07 000000476 INF: FPGA: Recv ZSGSRD 35708 17-03-17 19:09:09.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.628 -07 000000462 INF: FPGA: Recv ZSGSRD 35706 17-03-17 19:09:09.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:09.638 -07 000000569 INF: FPGA: Recv ZSGSRD 35707 17-03-17 19:09:09.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.648 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:09.648 -07 000000476 INF: FPGA: Recv ZPIEZORD 31646 17-03-17 19:09:09.658 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:09.658 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.656 V. Piezo Error = -9.0 V. 17-03-17 19:09:09.658 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.7 um, Read 10 ADC samples: Avg = 35707 (-168.8 uncal um), Error = 0.9 uncal um, Median = 35706 (-168.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35703 (-168.8 uncal um), Max = 35713 (-168.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-17 19:09:09.658 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35707, posNoise = 6, negNoise = 4 17-03-17 19:09:09.658 -07 000000610 INF: Z Motor: After move to -0.169691, error = -0.000022, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:09.658 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-17 19:09:09.658 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:09.658 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:09.658 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:09.658 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:09.658 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:09.658 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:09.658 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:09.658 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:09.658 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:09.658 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:09.668 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:09:09.668 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:09.668 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:09.668 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:09.668 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:09:09.668 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:09.678 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-17 19:09:09.678 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-17 19:09:09.678 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:09:09.678 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-17 19:09:09.688 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37246 150\n [Camera] 17-03-17 19:09:09.888 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:10.278 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:10.278 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:10.288 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:10.288 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:10.288 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:10.288 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:10.288 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:10.288 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-17 19:09:10.288 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:10.288 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start. 17-03-17 19:09:10.478 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37246 783 17-03-17 19:09:10.558 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.999021, 17-03-17 19:09:10.628 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:10.658 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 367 ms. 17-03-17 19:09:10.658 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 367 ms. 17-03-17 19:09:10.658 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:10.658 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 372 ms. 17-03-17 19:09:10.658 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms. 17-03-17 19:09:10.658 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:10.658 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:10.668 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:10.668 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-17 19:09:10.668 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms. 17-03-17 19:09:10.818 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:10.818 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:10.818 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:10.818 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:10.818 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:10.818 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:10.818 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:10.818 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start. 17-03-17 19:09:10.818 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:10.818 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start. 17-03-17 19:09:11.008 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:09:11.008 -07 000000482 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:11.008 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37246 150' command took 2 ms to send, 1315 ms to get response, and 1323 ms overall 17-03-17 19:09:11.008 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-17 19:09:11.008 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.373046875, Z-Position -0.169712694956993. ------ 17-03-17 19:09:11.018 -07 000000482 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.17550 mm 17-03-17 19:09:11.018 -07 000000482 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:11.018 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:09:11.128 -07 000000382 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:09:11.128 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 114 ms overall 17-03-17 19:09:11.128 -07 000000462 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:09:11.128 -07 000000627 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True) 17-03-17 19:09:11.128 -07 000000627 INF: Y Motor: Moving to 68.2126 mm, started at 67.3730 mm, delta = 0.8396 mm 17-03-17 19:09:11.128 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 38338, sync = True, waitForSettling = False) 17-03-17 19:09:11.128 -07 000000429 INF: Z Motor: Moving to -0.175500 mm, started at -0.169713 mm, distance = -5.79 um 17-03-17 19:09:11.138 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:11.138 -07 000000382 INF: FPGA: Recv YRDPOS 137980 17-03-17 19:09:11.148 -07 000000429 INF: FPGA: Xmit ZDACW 38338\n [Z Motor] 17-03-17 19:09:11.148 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-17 19:09:11.148 -07 000000627 INF: Y Motor: Encoder = 137980 = motor step 107796.9 = 67.3730 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:11.148 -07 000000627 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:11.148 -07 000000627 INF: Y Motor: Moving 1343 steps-21 17-03-17 19:09:11.148 -07 000000478 INF: FPGA: Recv ZDACW 17-03-17 19:09:11.158 -07 000000429 INF: FPGA: 'ZDACW 38338' command took 0 ms to send, 0 ms to get response, and 22 ms overall 17-03-17 19:09:11.158 -07 000000627 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:11.168 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:11.168 -07 000000382 INF: FPGA: Recv ZDACR 38338 17-03-17 19:09:11.178 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:11.178 -07 000000429 INF: Z Motor: MoveAbsStepped took 42 ms (did NOT wait for settling yet)) 17-03-17 19:09:11.198 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 377 ms. 17-03-17 19:09:11.198 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-17 19:09:11.198 -07 000000547 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:11.198 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 378 ms. 17-03-17 19:09:11.198 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-17 19:09:11.198 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:11.208 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:11.208 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-17 19:09:11.208 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:11.208 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-17 19:09:11.328 -07 000000429 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:09:11.328 -07 000000462 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 198 ms to get response, and 202 ms overall 17-03-17 19:09:11.528 -07 000000448 INF: FPGA: Recv YMVTILE 17-03-17 19:09:11.528 -07 000000627 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-17 19:09:11.568 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:11.568 -07 000000502 INF: FPGA: Recv YRDPOS 139685 17-03-17 19:09:11.578 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:11.578 -07 000000627 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:11.578 -07 000000627 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm) 17-03-17 19:09:11.578 -07 000000627 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.840 mm, average velocity = 2.169 mm/sec 17-03-17 19:09:11.658 -07 000000478 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:11.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:12.528 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:12.528 -07 000000382 INF: FPGA: Recv YRDPOS 139685 17-03-17 19:09:12.538 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:12.538 -07 000000627 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:12.548 -07 000000627 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:12.548 -07 000000627 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:09:12.548 -07 000000627 INF: Y Motor: Moved to 68.2056 after 1422 ms (table move) 17-03-17 19:09:12.558 -07 000000482 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175500 mm (DAC = 38338) 17-03-17 19:09:12.558 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:12.558 -07 000000382 INF: FPGA: Recv ZSGSRD 36620 17-03-17 19:09:12.568 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:12.568 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:12.568 -07 000000627 INF: FPGA: Recv ZSGSRD 36610 17-03-17 19:09:12.578 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:12.578 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:12.578 -07 000000569 INF: FPGA: Recv ZSGSRD 36611 17-03-17 19:09:12.588 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:12.588 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:12.588 -07 000000382 INF: FPGA: Recv ZSGSRD 36615 17-03-17 19:09:12.598 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:12.598 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:12.598 -07 000000569 INF: FPGA: Recv ZSGSRD 36610 17-03-17 19:09:12.608 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:12.608 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:12.608 -07 000000448 INF: FPGA: Recv ZSGSRD 36609 17-03-17 19:09:12.618 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:12.618 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:12.618 -07 000000627 INF: FPGA: Recv ZSGSRD 36606 17-03-17 19:09:12.628 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:12.628 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:12.628 -07 000000561 INF: FPGA: Recv ZSGSRD 36604 17-03-17 19:09:12.638 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:12.638 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:12.638 -07 000000429 INF: FPGA: Recv ZSGSRD 36610 17-03-17 19:09:12.648 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:12.648 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:12.648 -07 000000429 INF: FPGA: Recv ZSGSRD 36608 17-03-17 19:09:12.658 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:12.658 -07 000000482 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:12.658 -07 000000429 INF: FPGA: Recv ZPIEZORD 32898 17-03-17 19:09:12.668 -07 000000482 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:12.668 -07 000000482 INF: Z Motor: Piezo is near 50.3 V (nominally 0 to 100 V), expect near 58.5 V, since DAC is at 5.850 V. Piezo Error = -8.2 V. 17-03-17 19:09:12.668 -07 000000482 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.5 um, Read 10 ADC samples: Avg = 36610 (-174.6 uncal um), Error = 0.9 uncal um, Median = 36610 (-174.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 36604 (-174.6 uncal um), Max = 36620 (-174.7 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:09:12.668 -07 000000482 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36610, posNoise = 10, negNoise = 6 17-03-17 19:09:12.668 -07 000000482 INF: Z Motor: After move to -0.175500, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:12.668 -07 000000482 INF: Z Motor: Settle wait time = 1425 ms, measure time = 108 ms (allowed 150 ms), total time = 1533 ms 17-03-17 19:09:12.668 -07 000000482 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:12.718 -07 000000482 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1699 ms 17-03-17 19:09:12.718 -07 000000482 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:12.718 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:12.718 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:12.718 -07 000000448 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:12.718 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:09:12.718 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:12.718 -07 000000593 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:12.718 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:12.718 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:09:12.728 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-17 19:09:12.728 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:09:12.738 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms. 17-03-17 19:09:12.738 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms. 17-03-17 19:09:12.738 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:09:12.778 -07 000000429 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:09:12.978 -07 000000561 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:09:12.978 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:09:12.978 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:09:12.988 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start. 17-03-17 19:09:13.018 -07 000000569 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:09:13.018 -07 000000429 INF: FPGA: Recv CAMSNAP 17-03-17 19:09:13.018 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 284 ms overall 17-03-17 19:09:13.108 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 125 ms. 17-03-17 19:09:13.108 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:13.108 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-17 19:09:13.108 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms. 17-03-17 19:09:13.218 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:09:13.218 -07 000000478 INF: Autofocus start 17-03-17 19:09:13.218 -07 000000478 INF: MeasureProfile start 17-03-17 19:09:13.218 -07 000000482 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:09:13.228 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:13.228 -07 000000569 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:09:13.228 -07 000000478 INF: MeasureProfile done 17-03-17 19:09:13.228 -07 000000478 INF: X=48 Z correction [um]=0.1739867 17-03-17 19:09:13.228 -07 000000478 INF: Autofocus finished 17-03-17 19:09:13.428 -07 000000561 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:09:13.428 -07 000000569 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-17 19:09:13.428 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.175513758521004. ---------- 17-03-17 19:09:13.428 -07 000000610 INF: Cycle 22 Tile 11 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:13.438 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36888, sync = True, waitForSettling = True) 17-03-17 19:09:13.438 -07 000000610 INF: Z Motor: Moving to -0.168862 mm, started at -0.175514 mm, distance = 6.65 um 17-03-17 19:09:13.438 -07 000000610 INF: FPGA: Xmit ZDACW 36888\n [Z Motor] 17-03-17 19:09:13.438 -07 000000429 INF: FPGA: Recv ZDACW 17-03-17 19:09:13.448 -07 000000610 INF: FPGA: 'ZDACW 36888' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:09:13.448 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:13.448 -07 000000448 INF: FPGA: Recv ZDACR 36888 17-03-17 19:09:13.458 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:13.458 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:13.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:13.608 -07 000000429 INF: FPGA: Recv ZSGSRD 35576 17-03-17 19:09:13.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:13.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:13.618 -07 000000569 INF: FPGA: Recv ZSGSRD 35574 17-03-17 19:09:13.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:13.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:13.628 -07 000000429 INF: FPGA: Recv ZSGSRD 35575 17-03-17 19:09:13.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:13.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:13.638 -07 000000569 INF: FPGA: Recv ZSGSRD 35573 17-03-17 19:09:13.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:13.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:13.648 -07 000000593 INF: FPGA: Recv ZSGSRD 35571 17-03-17 19:09:13.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:13.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:13.658 -07 000000448 INF: FPGA: Recv ZSGSRD 35575 17-03-17 19:09:13.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:13.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:13.668 -07 000000593 INF: FPGA: Recv ZSGSRD 35578 17-03-17 19:09:13.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:13.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:13.678 -07 000000593 INF: FPGA: Recv ZSGSRD 35579 17-03-17 19:09:13.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:13.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:13.688 -07 000000593 INF: FPGA: Recv ZSGSRD 35570 17-03-17 19:09:13.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:13.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:13.698 -07 000000593 INF: FPGA: Recv ZSGSRD 35576 17-03-17 19:09:13.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:13.708 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:13.708 -07 000000593 INF: FPGA: Recv ZPIEZORD 31517 17-03-17 19:09:13.718 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:13.718 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.629 V. Piezo Error = -9.0 V. 17-03-17 19:09:13.718 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35575 (-168.0 uncal um), Error = 0.9 uncal um, Median = 35575 (-168.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35570 (-168.0 uncal um), Max = 35579 (-168.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:09:13.718 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35575, posNoise = 4, negNoise = 5 17-03-17 19:09:13.718 -07 000000610 INF: Z Motor: After move to -0.168862, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:13.718 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-17 19:09:13.718 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:13.718 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:13.718 -07 000000448 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:13.718 -07 000000593 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:13.718 -07 000000593 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:13.718 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:13.718 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:13.718 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:13.718 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:09:13.718 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:13.718 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:13.718 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:13.728 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:09:13.728 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:09:13.728 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:13.728 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:13.738 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-17 19:09:13.738 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-17 19:09:13.738 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms. 17-03-17 19:09:13.738 -07 000000593 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-17 19:09:13.738 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37065 150\n [Camera] 17-03-17 19:09:13.938 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:14.338 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:14.338 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:14.338 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:14.338 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:14.338 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:14.348 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:14.348 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:14.348 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:09:14.348 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:14.348 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) start. 17-03-17 19:09:14.718 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 370 ms. 17-03-17 19:09:14.718 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms. 17-03-17 19:09:14.718 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:14.728 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) end. Duration was 373 ms. 17-03-17 19:09:14.728 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-17 19:09:14.728 -07 000000448 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:14.728 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:14.728 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:14.728 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-17 19:09:14.728 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-17 19:09:14.738 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37065 783 17-03-17 19:09:14.738 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:14.868 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:14.868 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:14.878 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:14.878 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:14.878 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:14.878 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:14.878 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:14.878 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start. 17-03-17 19:09:14.888 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:14.888 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start. 17-03-17 19:09:15.068 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:09:15.068 -07 000000618 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:15.068 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37065 150' command took 2 ms to send, 1321 ms to get response, and 1326 ms overall 17-03-17 19:09:15.068 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.169533 17-03-17 19:09:15.068 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.16953 mm 17-03-17 19:09:15.068 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:15.068 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True) 17-03-17 19:09:15.068 -07 000000547 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm 17-03-17 19:09:15.068 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:15.068 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 37035, sync = True, waitForSettling = False) 17-03-17 19:09:15.068 -07 000000618 INF: Z Motor: Moving to -0.169535 mm, started at -0.168865 mm, distance = -0.67 um 17-03-17 19:09:15.068 -07 000000462 INF: FPGA: Recv YRDPOS 139686 17-03-17 19:09:15.078 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:09:15.078 -07 000000547 INF: Y Motor: Encoder = 139686 = motor step 109129.7 = 68.2061 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:15.078 -07 000000618 INF: FPGA: Xmit ZDACW 37035\n [Z Motor] 17-03-17 19:09:15.078 -07 000000382 INF: FPGA: Recv ZDACW 17-03-17 19:09:15.078 -07 000000547 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:15.078 -07 000000547 INF: Y Motor: Moving 1338 steps-14 17-03-17 19:09:15.088 -07 000000618 INF: FPGA: 'ZDACW 37035' command took 2 ms to send, 0 ms to get response, and 12 ms overall 17-03-17 19:09:15.088 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:15.088 -07 000000476 INF: FPGA: Recv ZDACR 37035 17-03-17 19:09:15.098 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:15.098 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:15.098 -07 000000618 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet)) 17-03-17 19:09:15.258 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 376 ms. 17-03-17 19:09:15.258 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-17 19:09:15.258 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:15.258 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 378 ms. 17-03-17 19:09:15.258 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms. 17-03-17 19:09:15.258 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:15.268 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:15.268 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:15.268 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-17 19:09:15.268 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-17 19:09:15.468 -07 000000448 INF: FPGA: Recv YMVTILE 17-03-17 19:09:15.468 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 392 ms overall 17-03-17 19:09:15.508 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:15.508 -07 000000448 INF: FPGA: Recv YRDPOS 141369 17-03-17 19:09:15.518 -07 000000547 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:09:15.518 -07 000000547 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:15.518 -07 000000547 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-17 19:09:15.518 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 392 ms, distance = 0.837 mm, average velocity = 2.135 mm/sec 17-03-17 19:09:15.918 -07 000000382 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.977204, 17-03-17 19:09:16.468 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:16.468 -07 000000462 INF: FPGA: Recv YRDPOS 141369 17-03-17 19:09:16.478 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.478 -07 000000547 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:16.498 -07 000000547 INF: Y Motor: After move to 69.042610, error = -0.014778, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:16.498 -07 000000547 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:09:16.498 -07 000000547 INF: Y Motor: Moved to 69.0278 after 1424 ms (table move) 17-03-17 19:09:16.498 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169535 mm (DAC = 37035) 17-03-17 19:09:16.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.498 -07 000000547 INF: FPGA: Recv ZSGSRD 35679 17-03-17 19:09:16.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:09:16.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.508 -07 000000547 INF: FPGA: Recv ZSGSRD 35676 17-03-17 19:09:16.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.518 -07 000000547 INF: FPGA: Recv ZSGSRD 35674 17-03-17 19:09:16.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.528 -07 000000547 INF: FPGA: Recv ZSGSRD 35683 17-03-17 19:09:16.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.538 -07 000000547 INF: FPGA: Recv ZSGSRD 35684 17-03-17 19:09:16.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.548 -07 000000547 INF: FPGA: Recv ZSGSRD 35683 17-03-17 19:09:16.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.558 -07 000000547 INF: FPGA: Recv ZSGSRD 35678 17-03-17 19:09:16.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.568 -07 000000547 INF: FPGA: Recv ZSGSRD 35681 17-03-17 19:09:16.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.578 -07 000000547 INF: FPGA: Recv ZSGSRD 35681 17-03-17 19:09:16.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.588 -07 000000547 INF: FPGA: Recv ZSGSRD 35678 17-03-17 19:09:16.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.598 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:16.598 -07 000000382 INF: FPGA: Recv ZPIEZORD 31648 17-03-17 19:09:16.608 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.608 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.651 V. Piezo Error = -8.9 V. 17-03-17 19:09:16.608 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.5 um, Read 10 ADC samples: Avg = 35680 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35680 (-168.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35674 (-168.6 uncal um), Max = 35684 (-168.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:09:16.608 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35680, posNoise = 4, negNoise = 6 17-03-17 19:09:16.608 -07 000000610 INF: Z Motor: After move to -0.169535, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:16.608 -07 000000610 INF: Z Motor: Settle wait time = 1428 ms, measure time = 105 ms (allowed 150 ms), total time = 1533 ms 17-03-17 19:09:16.608 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:16.658 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1586 ms 17-03-17 19:09:16.658 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:16.658 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02783203125, Z-position -0.169539241229166. ---------- 17-03-17 19:09:16.658 -07 000000610 INF: Cycle 22 Tile 12 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:16.658 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36858, sync = True, waitForSettling = True) 17-03-17 19:09:16.658 -07 000000610 INF: Z Motor: Moving to -0.168725 mm, started at -0.169539 mm, distance = 0.81 um 17-03-17 19:09:16.658 -07 000000610 INF: FPGA: Xmit ZDACW 36858\n [Z Motor] 17-03-17 19:09:16.658 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:16.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:16.658 -07 000000382 INF: FPGA: Recv ZDACW 17-03-17 19:09:16.668 -07 000000610 INF: FPGA: 'ZDACW 36858' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:09:16.668 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:16.668 -07 000000593 INF: FPGA: Recv ZDACR 36858 17-03-17 19:09:16.678 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:16.678 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:16.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.828 -07 000000424 INF: FPGA: Recv ZSGSRD 35552 17-03-17 19:09:16.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:16.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.838 -07 000000478 INF: FPGA: Recv ZSGSRD 35553 17-03-17 19:09:16.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.848 -07 000000478 INF: FPGA: Recv ZSGSRD 35558 17-03-17 19:09:16.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.858 -07 000000478 INF: FPGA: Recv ZSGSRD 35553 17-03-17 19:09:16.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.868 -07 000000476 INF: FPGA: Recv ZSGSRD 35559 17-03-17 19:09:16.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.878 -07 000000476 INF: FPGA: Recv ZSGSRD 35554 17-03-17 19:09:16.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.888 -07 000000424 INF: FPGA: Recv ZSGSRD 35553 17-03-17 19:09:16.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.898 -07 000000424 INF: FPGA: Recv ZSGSRD 35551 17-03-17 19:09:16.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.908 -07 000000424 INF: FPGA: Recv ZSGSRD 35552 17-03-17 19:09:16.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:16.918 -07 000000424 INF: FPGA: Recv ZSGSRD 35553 17-03-17 19:09:16.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.928 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:16.928 -07 000000476 INF: FPGA: Recv ZPIEZORD 31484 17-03-17 19:09:16.938 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:16.938 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.624 V. Piezo Error = -9.0 V. 17-03-17 19:09:16.938 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.7 um, Read 10 ADC samples: Avg = 35554 (-167.9 uncal um), Error = 0.9 uncal um, Median = 35553 (-167.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35551 (-167.8 uncal um), Max = 35559 (-167.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-17 19:09:16.938 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35554, posNoise = 5, negNoise = 3 17-03-17 19:09:16.938 -07 000000610 INF: Z Motor: After move to -0.168725, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:16.938 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-17 19:09:16.938 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:16.938 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:16.938 -07 000000476 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:16.938 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:16.938 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:16.938 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:16.938 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:16.938 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:16.938 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:09:16.938 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:16.938 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:16.938 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:16.948 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-17 19:09:16.948 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:16.948 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:16.948 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:16.958 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:09:16.958 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:09:16.958 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-17 19:09:16.958 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms. 17-03-17 19:09:16.968 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 37035 150\n [Camera] 17-03-17 19:09:17.168 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:17.558 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:17.558 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:17.568 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:17.568 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:17.568 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:17.568 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:17.678 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:17.678 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2567147168, 0x0, 391868352) start. 17-03-17 19:09:17.678 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:17.678 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-17 19:09:18.048 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2567147168, 0x0, 391868352) end. Duration was 373 ms. 17-03-17 19:09:18.048 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-17 19:09:18.048 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:18.048 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 370 ms. 17-03-17 19:09:18.048 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms. 17-03-17 19:09:18.048 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:18.058 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:18.058 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 491 ms. 17-03-17 19:09:18.058 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:18.068 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 497 ms. 17-03-17 19:09:18.068 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37035 783 17-03-17 19:09:18.068 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:18.098 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:18.098 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:18.098 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:18.098 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:18.098 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:18.098 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:18.098 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:18.098 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-17 19:09:18.108 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:18.108 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-17 19:09:18.488 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 384 ms. 17-03-17 19:09:18.488 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-17 19:09:18.488 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:18.488 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 383 ms. 17-03-17 19:09:18.488 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-17 19:09:18.488 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:18.488 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:18.488 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms. 17-03-17 19:09:18.488 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:18.498 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms. 17-03-17 19:09:18.508 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:09:18.508 -07 000000476 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:18.508 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 37035 150' command took 2 ms to send, 1533 ms to get response, and 1542 ms overall 17-03-17 19:09:18.508 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.169046 17-03-17 19:09:18.508 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16905 mm 17-03-17 19:09:18.508 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:18.508 -07 000000476 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True) 17-03-17 19:09:18.508 -07 000000476 INF: Y Motor: Moving to 69.8726 mm, started at 69.0278 mm, delta = 0.8448 mm 17-03-17 19:09:18.518 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:18.518 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 36928, sync = True, waitForSettling = False) 17-03-17 19:09:18.518 -07 000000424 INF: Z Motor: Moving to -0.169046 mm, started at -0.168730 mm, distance = -0.32 um 17-03-17 19:09:18.528 -07 000000424 INF: FPGA: Xmit ZDACW 36928\n [Z Motor] 17-03-17 19:09:19.248 -07 000000627 INF: FPGA: Recv YRDPOS 141369 17-03-17 19:09:19.248 -07 000000627 INF: FPGA: Recv ZDACW 17-03-17 19:09:19.248 -07 000000424 INF: FPGA: 'ZDACW 36928' command took 0 ms to send, 713 ms to get response, and 732 ms overall 17-03-17 19:09:19.248 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 723 ms to get response, and 733 ms overall 17-03-17 19:09:19.248 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:19.248 -07 000000476 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:19.248 -07 000000476 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:19.248 -07 000000476 INF: Y Motor: Moving 1352 steps-30 17-03-17 19:09:19.248 -07 000000502 INF: FPGA: Recv ZDACR 36928 17-03-17 19:09:19.258 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:19.258 -07 000000424 INF: Z Motor: MoveAbsStepped took 739 ms (did NOT wait for settling yet)) 17-03-17 19:09:19.258 -07 000000476 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:19.628 -07 000000547 INF: FPGA: Recv YMVTILE 17-03-17 19:09:19.628 -07 000000476 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall 17-03-17 19:09:19.668 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:19.668 -07 000000569 INF: FPGA: Recv YRDPOS 143081 17-03-17 19:09:19.678 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:09:19.678 -07 000000476 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:19.678 -07 000000476 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm) 17-03-17 19:09:19.678 -07 000000476 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.845 mm, average velocity = 2.200 mm/sec 17-03-17 19:09:20.628 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:20.628 -07 000000569 INF: FPGA: Recv YRDPOS 143081 17-03-17 19:09:20.638 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:20.638 -07 000000476 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:20.658 -07 000000476 INF: Y Motor: After move to 69.872612, error = -0.008842, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:20.658 -07 000000476 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:09:20.658 -07 000000476 INF: Y Motor: Moved to 69.8638 after 2141 ms (table move) 17-03-17 19:09:20.658 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169046 mm (DAC = 36928) 17-03-17 19:09:20.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.658 -07 000000429 INF: FPGA: Recv ZSGSRD 35611 17-03-17 19:09:20.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:20.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.668 -07 000000547 INF: FPGA: Recv ZSGSRD 35605 17-03-17 19:09:20.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:20.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.678 -07 000000424 INF: FPGA: Recv ZSGSRD 35607 17-03-17 19:09:20.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:20.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.688 -07 000000547 INF: FPGA: Recv ZSGSRD 35606 17-03-17 19:09:20.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:20.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.698 -07 000000618 INF: FPGA: Recv ZSGSRD 35609 17-03-17 19:09:20.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:20.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.708 -07 000000502 INF: FPGA: Recv ZSGSRD 35603 17-03-17 19:09:20.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:20.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.718 -07 000000462 INF: FPGA: Recv ZSGSRD 35596 17-03-17 19:09:20.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:20.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.728 -07 000000482 INF: FPGA: Recv ZSGSRD 35598 17-03-17 19:09:20.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:20.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.738 -07 000000429 INF: FPGA: Recv ZSGSRD 35600 17-03-17 19:09:20.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:20.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.748 -07 000000547 INF: FPGA: Recv ZSGSRD 35602 17-03-17 19:09:20.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:20.758 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:20.758 -07 000000462 INF: FPGA: Recv ZPIEZORD 31589 17-03-17 19:09:20.768 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:20.768 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.635 V. Piezo Error = -8.9 V. 17-03-17 19:09:20.768 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.0 um, Read 10 ADC samples: Avg = 35604 (-168.2 uncal um), Error = 0.9 uncal um, Median = 35604 (-168.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35596 (-168.1 uncal um), Max = 35611 (-168.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-17 19:09:20.768 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35604, posNoise = 7, negNoise = 8 17-03-17 19:09:20.768 -07 000000610 INF: Z Motor: After move to -0.169046, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:20.768 -07 000000610 INF: Z Motor: Settle wait time = 2143 ms, measure time = 107 ms (allowed 150 ms), total time = 2250 ms 17-03-17 19:09:20.768 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:20.818 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2303 ms 17-03-17 19:09:20.818 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:20.818 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86376953125, Z-position -0.169051001106392. ---------- 17-03-17 19:09:20.818 -07 000000610 INF: Cycle 22 Tile 13 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:20.818 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36751, sync = True, waitForSettling = True) 17-03-17 19:09:20.818 -07 000000610 INF: Z Motor: Moving to -0.168235 mm, started at -0.169051 mm, distance = 0.82 um 17-03-17 19:09:20.818 -07 000000610 INF: FPGA: Xmit ZDACW 36751\n [Z Motor] 17-03-17 19:09:20.818 -07 000000429 INF: FPGA: Recv ZDACW 17-03-17 19:09:20.828 -07 000000610 INF: FPGA: 'ZDACW 36751' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:09:20.828 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:20.828 -07 000000618 INF: FPGA: Recv ZDACR 36751 17-03-17 19:09:20.838 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:20.838 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:20.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.988 -07 000000448 INF: FPGA: Recv ZSGSRD 35485 17-03-17 19:09:20.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:20.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:20.998 -07 000000476 INF: FPGA: Recv ZSGSRD 35482 17-03-17 19:09:21.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:21.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:21.008 -07 000000502 INF: FPGA: Recv ZSGSRD 35484 17-03-17 19:09:21.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:21.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:21.018 -07 000000618 INF: FPGA: Recv ZSGSRD 35479 17-03-17 19:09:21.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:21.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:21.028 -07 000000476 INF: FPGA: Recv ZSGSRD 35479 17-03-17 19:09:21.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:21.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:21.038 -07 000000476 INF: FPGA: Recv ZSGSRD 35477 17-03-17 19:09:21.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:21.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:21.048 -07 000000618 INF: FPGA: Recv ZSGSRD 35474 17-03-17 19:09:21.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:21.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:21.058 -07 000000382 INF: FPGA: Recv ZSGSRD 35481 17-03-17 19:09:21.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:21.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:21.068 -07 000000462 INF: FPGA: Recv ZSGSRD 35480 17-03-17 19:09:21.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:21.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:21.078 -07 000000476 INF: FPGA: Recv ZSGSRD 35477 17-03-17 19:09:21.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:21.088 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:21.088 -07 000000482 INF: FPGA: Recv ZPIEZORD 31429 17-03-17 19:09:21.098 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:21.098 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.608 V. Piezo Error = -8.9 V. 17-03-17 19:09:21.098 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.2 um, Read 10 ADC samples: Avg = 35480 (-167.4 uncal um), Error = 0.9 uncal um, Median = 35480 (-167.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35474 (-167.3 uncal um), Max = 35485 (-167.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:09:21.098 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35480, posNoise = 5, negNoise = 6 17-03-17 19:09:21.098 -07 000000610 INF: Z Motor: After move to -0.168235, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:21.098 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-17 19:09:21.098 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:21.098 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:21.098 -07 000000476 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:21.098 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:21.098 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:21.098 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:21.098 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-17 19:09:21.098 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:21.098 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:21.098 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:21.098 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:21.098 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:21.108 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-17 19:09:21.108 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:21.108 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:21.108 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:21.118 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-17 19:09:21.118 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-17 19:09:21.118 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-17 19:09:21.118 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms. 17-03-17 19:09:21.118 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 36928 150\n [Camera] 17-03-17 19:09:21.278 -07 000000448 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.973092, 17-03-17 19:09:21.318 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:21.658 -07 000000448 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:21.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:21.718 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:21.718 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:21.718 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:21.718 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:21.718 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:21.718 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:21.718 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:21.718 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-17 19:09:21.718 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:21.718 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2602569432, 0x0, 391868352) start. 17-03-17 19:09:21.908 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36928 783 17-03-17 19:09:22.058 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:22.098 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 377 ms. 17-03-17 19:09:22.098 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-17 19:09:22.098 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:22.098 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2602569432, 0x0, 391868352) end. Duration was 376 ms. 17-03-17 19:09:22.098 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-17 19:09:22.098 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:22.108 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:22.108 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:22.108 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-17 19:09:22.108 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-17 19:09:22.248 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:22.248 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:22.248 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:22.248 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:22.248 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) start. 17-03-17 19:09:22.258 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:22.258 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:22.258 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:22.368 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:22.368 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-17 19:09:22.438 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:09:22.438 -07 000000448 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:22.438 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 36928 150' command took 2 ms to send, 1319 ms to get response, and 1323 ms overall 17-03-17 19:09:22.448 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.168640 17-03-17 19:09:22.448 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16864 mm 17-03-17 19:09:22.448 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:22.448 -07 000000448 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True) 17-03-17 19:09:22.448 -07 000000448 INF: Y Motor: Moving to 70.7026 mm, started at 69.8638 mm, delta = 0.8388 mm 17-03-17 19:09:22.448 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:22.638 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) end. Duration was 391 ms. 17-03-17 19:09:22.638 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-17 19:09:22.648 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:22.648 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:22.648 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms. 17-03-17 19:09:22.658 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 36839, sync = True, waitForSettling = False) 17-03-17 19:09:22.658 -07 000000424 INF: Z Motor: Moving to -0.168638 mm, started at -0.168254 mm, distance = -0.38 um 17-03-17 19:09:22.658 -07 000000424 INF: FPGA: Xmit ZDACW 36839\n [Z Motor] 17-03-17 19:09:22.748 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 379 ms. 17-03-17 19:09:22.748 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-17 19:09:22.748 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:22.758 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:22.758 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 506 ms. 17-03-17 19:09:22.768 -07 000000429 INF: FPGA: Recv YRDPOS 143081 17-03-17 19:09:22.768 -07 000000429 INF: FPGA: Recv ZDACW 17-03-17 19:09:22.768 -07 000000424 INF: FPGA: 'ZDACW 36839' command took 0 ms to send, 107 ms to get response, and 113 ms overall 17-03-17 19:09:22.768 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:22.768 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 316 ms to get response, and 322 ms overall 17-03-17 19:09:22.768 -07 000000448 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:22.768 -07 000000448 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:22.768 -07 000000448 INF: Y Motor: Moving 1342 steps-18 17-03-17 19:09:22.768 -07 000000429 INF: FPGA: Recv ZDACR 36839 17-03-17 19:09:22.778 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-17 19:09:22.778 -07 000000424 INF: Z Motor: MoveAbsStepped took 117 ms (did NOT wait for settling yet)) 17-03-17 19:09:22.778 -07 000000448 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:23.148 -07 000000424 INF: FPGA: Recv YMVTILE 17-03-17 19:09:23.148 -07 000000448 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 380 ms overall 17-03-17 19:09:23.188 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:23.188 -07 000000593 INF: FPGA: Recv YRDPOS 144771 17-03-17 19:09:23.198 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:09:23.198 -07 000000448 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:23.198 -07 000000448 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm) 17-03-17 19:09:23.198 -07 000000448 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 380 ms, distance = 0.839 mm, average velocity = 2.207 mm/sec 17-03-17 19:09:24.148 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:24.148 -07 000000478 INF: FPGA: Recv YRDPOS 144771 17-03-17 19:09:24.158 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.158 -07 000000448 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:24.178 -07 000000448 INF: Y Motor: After move to 70.702606, error = -0.013641, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:24.178 -07 000000448 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:09:24.178 -07 000000448 INF: Y Motor: Moved to 70.6890 after 1727 ms (table move) 17-03-17 19:09:24.178 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168638 mm (DAC = 36839) 17-03-17 19:09:24.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.178 -07 000000482 INF: FPGA: Recv ZSGSRD 35545 17-03-17 19:09:24.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:09:24.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.188 -07 000000424 INF: FPGA: Recv ZSGSRD 35536 17-03-17 19:09:24.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.198 -07 000000448 INF: FPGA: Recv ZSGSRD 35541 17-03-17 19:09:24.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.208 -07 000000429 INF: FPGA: Recv ZSGSRD 35543 17-03-17 19:09:24.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.218 -07 000000502 INF: FPGA: Recv ZSGSRD 35547 17-03-17 19:09:24.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.228 -07 000000593 INF: FPGA: Recv ZSGSRD 35541 17-03-17 19:09:24.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.238 -07 000000478 INF: FPGA: Recv ZSGSRD 35540 17-03-17 19:09:24.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.248 -07 000000424 INF: FPGA: Recv ZSGSRD 35541 17-03-17 19:09:24.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.258 -07 000000429 INF: FPGA: Recv ZSGSRD 35538 17-03-17 19:09:24.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.268 -07 000000593 INF: FPGA: Recv ZSGSRD 35538 17-03-17 19:09:24.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.278 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:24.278 -07 000000429 INF: FPGA: Recv ZPIEZORD 31506 17-03-17 19:09:24.288 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.288 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.621 V. Piezo Error = -8.9 V. 17-03-17 19:09:24.288 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35541 (-167.8 uncal um), Error = 0.9 uncal um, Median = 35541 (-167.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35536 (-167.7 uncal um), Max = 35547 (-167.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:09:24.288 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35541, posNoise = 6, negNoise = 5 17-03-17 19:09:24.288 -07 000000610 INF: Z Motor: After move to -0.168638, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:24.288 -07 000000610 INF: Z Motor: Settle wait time = 1521 ms, measure time = 106 ms (allowed 150 ms), total time = 1627 ms 17-03-17 19:09:24.288 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:24.338 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1888 ms 17-03-17 19:09:24.338 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:24.338 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68896484375, Z-position -0.168646275741461. ---------- 17-03-17 19:09:24.338 -07 000000610 INF: Cycle 22 Tile 14 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:24.338 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36663, sync = True, waitForSettling = True) 17-03-17 19:09:24.338 -07 000000610 INF: Z Motor: Moving to -0.167832 mm, started at -0.168646 mm, distance = 0.81 um 17-03-17 19:09:24.338 -07 000000610 INF: FPGA: Xmit ZDACW 36663\n [Z Motor] 17-03-17 19:09:24.338 -07 000000448 INF: FPGA: Recv ZDACW 17-03-17 19:09:24.348 -07 000000610 INF: FPGA: 'ZDACW 36663' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:09:24.348 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:24.348 -07 000000482 INF: FPGA: Recv ZDACR 36663 17-03-17 19:09:24.358 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.358 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:24.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.508 -07 000000424 INF: FPGA: Recv ZSGSRD 35416 17-03-17 19:09:24.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:24.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.518 -07 000000593 INF: FPGA: Recv ZSGSRD 35419 17-03-17 19:09:24.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.528 -07 000000429 INF: FPGA: Recv ZSGSRD 35415 17-03-17 19:09:24.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.538 -07 000000478 INF: FPGA: Recv ZSGSRD 35416 17-03-17 19:09:24.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.548 -07 000000448 INF: FPGA: Recv ZSGSRD 35413 17-03-17 19:09:24.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.558 -07 000000478 INF: FPGA: Recv ZSGSRD 35417 17-03-17 19:09:24.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.568 -07 000000429 INF: FPGA: Recv ZSGSRD 35414 17-03-17 19:09:24.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.578 -07 000000478 INF: FPGA: Recv ZSGSRD 35414 17-03-17 19:09:24.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.588 -07 000000593 INF: FPGA: Recv ZSGSRD 35417 17-03-17 19:09:24.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:24.608 -07 000000478 INF: FPGA: Recv ZSGSRD 35420 17-03-17 19:09:24.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:24.618 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:24.618 -07 000000502 INF: FPGA: Recv ZPIEZORD 31332 17-03-17 19:09:24.628 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:24.628 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.594 V. Piezo Error = -9.0 V. 17-03-17 19:09:24.628 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.8 um, Read 10 ADC samples: Avg = 35416 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35416 (-167.0 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35413 (-167.0 uncal um), Max = 35420 (-167.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-17 19:09:24.628 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35416, posNoise = 4, negNoise = 3 17-03-17 19:09:24.628 -07 000000610 INF: Z Motor: After move to -0.167832, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:24.628 -07 000000610 INF: Z Motor: MoveAbsStepped took 284 ms) 17-03-17 19:09:24.628 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:24.628 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:24.628 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:24.628 -07 000000593 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:24.628 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:24.628 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:24.628 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:24.628 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:24.628 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:09:24.628 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:24.628 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:24.628 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:24.638 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-17 19:09:24.638 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:24.638 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:09:24.638 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:24.638 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-17 19:09:24.638 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms. 17-03-17 19:09:24.648 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-17 19:09:24.648 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms. 17-03-17 19:09:24.648 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 36839 150\n [Camera] 17-03-17 19:09:24.848 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:25.248 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:25.248 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:25.248 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:25.248 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:25.248 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:25.248 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:25.248 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-17 19:09:25.248 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:25.258 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:25.258 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-17 19:09:25.438 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36839 783 17-03-17 19:09:25.588 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:25.628 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 376 ms. 17-03-17 19:09:25.628 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms. 17-03-17 19:09:25.628 -07 000000448 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:25.628 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:25.628 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-17 19:09:25.628 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 375 ms. 17-03-17 19:09:25.628 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-17 19:09:25.628 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:25.638 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:25.648 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-17 19:09:25.778 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:25.778 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:25.778 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:25.778 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:25.778 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:25.778 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:25.778 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:25.778 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2567016040, 0x0, 391868352) start. 17-03-17 19:09:25.788 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:25.788 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2602438304, 0x0, 418435064) start. 17-03-17 19:09:25.968 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:09:25.968 -07 000000448 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:25.968 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 36839 150' command took 2 ms to send, 1315 ms to get response, and 1323 ms overall 17-03-17 19:09:25.968 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-17 19:09:25.968 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.68896484375, Z-Position -0.167843249223741. ------ 17-03-17 19:09:25.978 -07 000000448 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:09:26.178 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2567016040, 0x0, 391868352) end. Duration was 396 ms. 17-03-17 19:09:26.178 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-17 19:09:26.178 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:26.178 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2602438304, 0x0, 418435064) end. Duration was 394 ms. 17-03-17 19:09:26.178 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-17 19:09:26.178 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:26.188 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:26.188 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms. 17-03-17 19:09:26.188 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:26.188 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms. 17-03-17 19:09:26.198 -07 000000462 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.17448 mm 17-03-17 19:09:26.198 -07 000000462 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:26.198 -07 000000424 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:09:26.198 -07 000000448 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 218 ms to get response, and 227 ms overall 17-03-17 19:09:26.198 -07 000000448 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:09:26.198 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True) 17-03-17 19:09:26.198 -07 000000424 INF: Y Motor: Moving to 71.5326 mm, started at 70.6890 mm, delta = 0.8436 mm 17-03-17 19:09:26.208 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:26.748 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 38115, sync = True, waitForSettling = False) 17-03-17 19:09:26.748 -07 000000569 INF: Z Motor: Moving to -0.174479 mm, started at -0.167843 mm, distance = -6.64 um 17-03-17 19:09:26.748 -07 000000569 INF: FPGA: Xmit ZDACW 38115\n [Z Motor] 17-03-17 19:09:27.748 -07 000000476 INF: FPGA: Recv YRDPOS 144772 17-03-17 19:09:27.748 -07 000000476 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:09:27.748 -07 000000476 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:27.748 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1530 ms to get response, and 1540 ms overall 17-03-17 19:09:27.748 -07 000000448 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 1540 ms to get response, and 1542 ms overall 17-03-17 19:09:27.748 -07 000000476 INF: FPGA: Recv ZDACW 17-03-17 19:09:27.748 -07 000000569 INF: FPGA: 'ZDACW 38115' command took 0 ms to send, 991 ms to get response, and 1000 ms overall 17-03-17 19:09:27.748 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:27.748 -07 000000424 INF: Y Motor: Encoder = 144772 = motor step 113103.1 = 70.6895 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:27.748 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:27.748 -07 000000476 INF: FPGA: Recv ZDACR 38115 17-03-17 19:09:27.758 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:09:27.758 -07 000000569 INF: Z Motor: MoveAbsStepped took 1008 ms (did NOT wait for settling yet)) 17-03-17 19:09:27.758 -07 000000424 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:27.758 -07 000000424 INF: Y Motor: Moving 1349 steps-28 17-03-17 19:09:27.758 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:28.058 -07 000000476 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.981281, 17-03-17 19:09:28.138 -07 000000476 INF: FPGA: Recv YMVTILE 17-03-17 19:09:28.138 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 378 ms overall 17-03-17 19:09:28.168 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:28.168 -07 000000569 INF: FPGA: Recv YRDPOS 146472 17-03-17 19:09:28.178 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:09:28.178 -07 000000424 INF: Y Motor: Encoder = 146472 = motor step 114431.3 = 71.5195 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:28.178 -07 000000424 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm) 17-03-17 19:09:28.178 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.232 mm/sec 17-03-17 19:09:29.128 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:29.128 -07 000000569 INF: FPGA: Recv YRDPOS 146472 17-03-17 19:09:29.138 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:29.138 -07 000000424 INF: Y Motor: Encoder = 146472 = motor step 114431.3 = 71.5195 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:29.158 -07 000000424 INF: Y Motor: After move to 71.532608, error = -0.013077, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:29.158 -07 000000424 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:09:29.158 -07 000000424 INF: Y Motor: Moved to 71.5195 after 2951 ms (table move) 17-03-17 19:09:29.158 -07 000000462 INF: Z Motor: EndOfMoveAbsStepped: target = -0.174479 mm (DAC = 38115) 17-03-17 19:09:29.158 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:29.158 -07 000000448 INF: FPGA: Recv ZSGSRD 36452 17-03-17 19:09:29.168 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:09:29.168 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:29.168 -07 000000448 INF: FPGA: Recv ZSGSRD 36453 17-03-17 19:09:29.178 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:29.178 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:29.178 -07 000000424 INF: FPGA: Recv ZSGSRD 36451 17-03-17 19:09:29.188 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:29.188 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:29.188 -07 000000569 INF: FPGA: Recv ZSGSRD 36451 17-03-17 19:09:29.198 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:29.198 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:29.198 -07 000000424 INF: FPGA: Recv ZSGSRD 36452 17-03-17 19:09:29.208 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:29.208 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:29.208 -07 000000424 INF: FPGA: Recv ZSGSRD 36445 17-03-17 19:09:29.218 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:29.218 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:29.218 -07 000000569 INF: FPGA: Recv ZSGSRD 36444 17-03-17 19:09:29.228 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:29.228 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:29.228 -07 000000429 INF: FPGA: Recv ZSGSRD 36455 17-03-17 19:09:29.238 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:29.238 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:29.238 -07 000000382 INF: FPGA: Recv ZSGSRD 36447 17-03-17 19:09:29.248 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:29.248 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:29.248 -07 000000476 INF: FPGA: Recv ZSGSRD 36451 17-03-17 19:09:29.258 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:29.258 -07 000000462 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:29.258 -07 000000627 INF: FPGA: Recv ZPIEZORD 32703 17-03-17 19:09:29.268 -07 000000462 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:29.268 -07 000000462 INF: Z Motor: Piezo is near 49.9 V (nominally 0 to 100 V), expect near 58.2 V, since DAC is at 5.816 V. Piezo Error = -8.3 V. 17-03-17 19:09:29.268 -07 000000462 INF: Z Motor: ReadAdcAverage: Commanded Z = -174.5 um, Read 10 ADC samples: Avg = 36450 (-173.6 uncal um), Error = 0.9 uncal um, Median = 36451 (-173.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36444 (-173.6 uncal um), Max = 36455 (-173.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:09:29.268 -07 000000462 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36450, posNoise = 5, negNoise = 6 17-03-17 19:09:29.268 -07 000000462 INF: Z Motor: After move to -0.174479, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:29.268 -07 000000462 INF: Z Motor: Settle wait time = 2413 ms, measure time = 106 ms (allowed 150 ms), total time = 2519 ms 17-03-17 19:09:29.268 -07 000000462 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:29.318 -07 000000462 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 3116 ms 17-03-17 19:09:29.318 -07 000000462 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:29.318 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:29.318 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:29.318 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:29.318 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:29.318 -07 000000448 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:09:29.318 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:29.318 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:29.318 -07 000000448 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:09:29.328 -07 000000448 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:29.328 -07 000000448 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:09:29.328 -07 000000448 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms. 17-03-17 19:09:29.328 -07 000000448 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms. 17-03-17 19:09:29.338 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:09:29.378 -07 000000429 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:09:29.578 -07 000000424 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:09:29.578 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:09:29.578 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:09:29.578 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2637991696, 0x0, 559484976) start. 17-03-17 19:09:29.618 -07 000000476 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:09:29.618 -07 000000462 INF: FPGA: Recv CAMSNAP 17-03-17 19:09:29.618 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 276 ms to get response, and 285 ms overall 17-03-17 19:09:29.698 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2637991696, 0x0, 559484976) end. Duration was 116 ms. 17-03-17 19:09:29.698 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:29.698 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-17 19:09:29.698 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms. 17-03-17 19:09:29.718 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:09:29.718 -07 000000424 INF: Autofocus start 17-03-17 19:09:29.718 -07 000000424 INF: MeasureProfile start 17-03-17 19:09:29.718 -07 000000382 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:09:29.728 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:29.728 -07 000000569 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:09:29.738 -07 000000424 INF: MeasureProfile done 17-03-17 19:09:29.738 -07 000000424 INF: X=0 Z correction [um]=-0.0713522 17-03-17 19:09:29.738 -07 000000424 INF: Autofocus finished 17-03-17 19:09:29.928 -07 000000448 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:09:29.928 -07 000000569 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-17 19:09:29.928 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51953125, Z-position -0.174485884578322. ---------- 17-03-17 19:09:29.938 -07 000000610 INF: Cycle 22 Tile 15 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:29.938 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36612, sync = True, waitForSettling = True) 17-03-17 19:09:29.938 -07 000000610 INF: Z Motor: Moving to -0.167599 mm, started at -0.174486 mm, distance = 6.89 um 17-03-17 19:09:29.938 -07 000000610 INF: FPGA: Xmit ZDACW 36612\n [Z Motor] 17-03-17 19:09:29.938 -07 000000429 INF: FPGA: Recv ZDACW 17-03-17 19:09:29.948 -07 000000610 INF: FPGA: 'ZDACW 36612' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:09:29.948 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:29.948 -07 000000382 INF: FPGA: Recv ZDACR 36612 17-03-17 19:09:29.958 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:29.958 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:30.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:30.108 -07 000000424 INF: FPGA: Recv ZSGSRD 35383 17-03-17 19:09:30.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:30.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:30.118 -07 000000448 INF: FPGA: Recv ZSGSRD 35377 17-03-17 19:09:30.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:30.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:30.128 -07 000000618 INF: FPGA: Recv ZSGSRD 35384 17-03-17 19:09:30.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:30.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:30.138 -07 000000627 INF: FPGA: Recv ZSGSRD 35374 17-03-17 19:09:30.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:30.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:30.148 -07 000000424 INF: FPGA: Recv ZSGSRD 35385 17-03-17 19:09:30.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:30.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:30.158 -07 000000569 INF: FPGA: Recv ZSGSRD 35383 17-03-17 19:09:30.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:30.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:30.168 -07 000000618 INF: FPGA: Recv ZSGSRD 35377 17-03-17 19:09:30.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:30.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:30.178 -07 000000429 INF: FPGA: Recv ZSGSRD 35380 17-03-17 19:09:30.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:30.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:30.188 -07 000000593 INF: FPGA: Recv ZSGSRD 35376 17-03-17 19:09:30.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:30.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:30.198 -07 000000382 INF: FPGA: Recv ZSGSRD 35384 17-03-17 19:09:30.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:30.208 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:30.208 -07 000000618 INF: FPGA: Recv ZPIEZORD 31248 17-03-17 19:09:30.218 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:30.218 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.587 V. Piezo Error = -9.1 V. 17-03-17 19:09:30.218 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.6 um, Read 10 ADC samples: Avg = 35380 (-166.7 uncal um), Error = 0.9 uncal um, Median = 35382 (-166.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35374 (-166.7 uncal um), Max = 35385 (-166.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:09:30.218 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35380, posNoise = 5, negNoise = 6 17-03-17 19:09:30.218 -07 000000610 INF: Z Motor: After move to -0.167599, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:30.218 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms) 17-03-17 19:09:30.218 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:30.218 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:30.218 -07 000000593 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:30.218 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:30.218 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:30.218 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:30.218 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:30.218 -07 000000382 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:30.218 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-17 19:09:30.218 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:30.218 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-17 19:09:30.218 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:30.228 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:30.228 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:30.228 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-17 19:09:30.228 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:30.238 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-17 19:09:30.238 -07 000000593 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:09:30.238 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:09:30.238 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms. 17-03-17 19:09:30.248 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 36789 150\n [Camera] 17-03-17 19:09:30.448 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:30.848 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:30.848 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:30.848 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:30.848 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:30.848 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-17 19:09:30.848 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:30.848 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:30.848 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:30.958 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:30.958 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-17 19:09:31.038 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36789 783 17-03-17 19:09:31.188 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:31.238 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 388 ms. 17-03-17 19:09:31.238 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-17 19:09:31.238 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:31.238 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:31.238 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-17 19:09:31.338 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 376 ms. 17-03-17 19:09:31.338 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-17 19:09:31.338 -07 000000547 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:31.338 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms. 17-03-17 19:09:31.348 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 497 ms. 17-03-17 19:09:31.378 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:31.378 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:31.378 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:31.378 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:31.378 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:31.378 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:31.388 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:31.388 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-17 19:09:31.388 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:31.388 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-17 19:09:31.568 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:09:31.568 -07 000000593 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:31.568 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 36789 150' command took 2 ms to send, 1317 ms to get response, and 1327 ms overall 17-03-17 19:09:31.568 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.167502 17-03-17 19:09:31.568 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.16750 mm 17-03-17 19:09:31.568 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:31.578 -07 000000476 INF: Z Motor: Entering MoveAbsStepped (DAC = 36591, sync = True, waitForSettling = False) 17-03-17 19:09:31.578 -07 000000476 INF: Z Motor: Moving to -0.167503 mm, started at -0.167612 mm, distance = 0.11 um 17-03-17 19:09:31.578 -07 000000476 INF: FPGA: Xmit ZDACW 36591\n [Z Motor] 17-03-17 19:09:31.578 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True) 17-03-17 19:09:31.578 -07 000000502 INF: Y Motor: Moving to 72.3626 mm, started at 71.5195 mm, delta = 0.8431 mm 17-03-17 19:09:31.578 -07 000000448 INF: FPGA: Recv ZDACW 17-03-17 19:09:31.588 -07 000000476 INF: FPGA: 'ZDACW 36591' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:09:31.588 -07 000000476 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:31.588 -07 000000593 INF: FPGA: Recv ZDACR 36591 17-03-17 19:09:31.598 -07 000000476 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:31.598 -07 000000476 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet)) 17-03-17 19:09:31.598 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:31.598 -07 000000547 INF: FPGA: Recv YRDPOS 146473 17-03-17 19:09:31.608 -07 000000502 INF: FPGA: 'YRDPOS' command took 2 ms to send, 0 ms to get response, and 26 ms overall 17-03-17 19:09:31.608 -07 000000502 INF: Y Motor: Encoder = 146473 = motor step 114432.0 = 71.5200 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:31.608 -07 000000502 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:31.608 -07 000000502 INF: Y Motor: Moving 1348 steps-27 17-03-17 19:09:31.608 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:31.658 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:31.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:31.788 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 399 ms. 17-03-17 19:09:31.788 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms. 17-03-17 19:09:31.788 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:31.788 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 398 ms. 17-03-17 19:09:31.788 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-17 19:09:31.788 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:31.788 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:31.788 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 412 ms. 17-03-17 19:09:31.788 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:31.798 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 416 ms. 17-03-17 19:09:31.988 -07 000000547 INF: FPGA: Recv YMVTILE 17-03-17 19:09:31.988 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 378 ms overall 17-03-17 19:09:32.018 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:32.028 -07 000000569 INF: FPGA: Recv YRDPOS 148173 17-03-17 19:09:32.028 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:09:32.028 -07 000000502 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:32.028 -07 000000502 INF: Y Motor: Position error before settling (table move) = -26 encoder counts (-0.013 mm) 17-03-17 19:09:32.028 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.843 mm, average velocity = 2.230 mm/sec 17-03-17 19:09:32.978 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:32.978 -07 000000618 INF: FPGA: Recv YRDPOS 148173 17-03-17 19:09:32.988 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:32.988 -07 000000502 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:33.008 -07 000000502 INF: Y Motor: After move to 72.362610, error = -0.012512, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:33.008 -07 000000502 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:09:33.008 -07 000000502 INF: Y Motor: Moved to 72.3501 after 1427 ms (table move) 17-03-17 19:09:33.008 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167503 mm (DAC = 36591) 17-03-17 19:09:33.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.008 -07 000000569 INF: FPGA: Recv ZSGSRD 35360 17-03-17 19:09:33.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:33.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.018 -07 000000502 INF: FPGA: Recv ZSGSRD 35363 17-03-17 19:09:33.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.028 -07 000000547 INF: FPGA: Recv ZSGSRD 35370 17-03-17 19:09:33.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.038 -07 000000547 INF: FPGA: Recv ZSGSRD 35365 17-03-17 19:09:33.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.048 -07 000000547 INF: FPGA: Recv ZSGSRD 35356 17-03-17 19:09:33.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.058 -07 000000618 INF: FPGA: Recv ZSGSRD 35363 17-03-17 19:09:33.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.068 -07 000000547 INF: FPGA: Recv ZSGSRD 35366 17-03-17 19:09:33.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.078 -07 000000429 INF: FPGA: Recv ZSGSRD 35369 17-03-17 19:09:33.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.088 -07 000000569 INF: FPGA: Recv ZSGSRD 35364 17-03-17 19:09:33.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.108 -07 000000502 INF: FPGA: Recv ZSGSRD 35374 17-03-17 19:09:33.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:33.118 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:33.118 -07 000000547 INF: FPGA: Recv ZPIEZORD 31284 17-03-17 19:09:33.128 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.128 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.583 V. Piezo Error = -9.0 V. 17-03-17 19:09:33.128 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.5 um, Read 10 ADC samples: Avg = 35365 (-166.6 uncal um), Error = 0.9 uncal um, Median = 35364 (-166.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 35356 (-166.6 uncal um), Max = 35374 (-166.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-17 19:09:33.128 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35365, posNoise = 9, negNoise = 9 17-03-17 19:09:33.128 -07 000000610 INF: Z Motor: After move to -0.167503, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:33.128 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 117 ms (allowed 150 ms), total time = 1548 ms 17-03-17 19:09:33.128 -07 000000610 INF: Z Motor: Waiting extra 33 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:33.168 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1590 ms 17-03-17 19:09:33.168 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:33.168 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.35009765625, Z-position -0.167515614404511. ---------- 17-03-17 19:09:33.168 -07 000000610 INF: Cycle 22 Tile 16 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:33.168 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36414, sync = True, waitForSettling = True) 17-03-17 19:09:33.168 -07 000000610 INF: Z Motor: Moving to -0.166693 mm, started at -0.167516 mm, distance = 0.82 um 17-03-17 19:09:33.168 -07 000000610 INF: FPGA: Xmit ZDACW 36414\n [Z Motor] 17-03-17 19:09:33.168 -07 000000429 INF: FPGA: Recv ZDACW 17-03-17 19:09:33.178 -07 000000610 INF: FPGA: 'ZDACW 36414' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:09:33.178 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:33.178 -07 000000429 INF: FPGA: Recv ZDACR 36414 17-03-17 19:09:33.188 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.188 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:33.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.338 -07 000000429 INF: FPGA: Recv ZSGSRD 35242 17-03-17 19:09:33.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:33.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.348 -07 000000502 INF: FPGA: Recv ZSGSRD 35236 17-03-17 19:09:33.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.358 -07 000000547 INF: FPGA: Recv ZSGSRD 35238 17-03-17 19:09:33.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.368 -07 000000547 INF: FPGA: Recv ZSGSRD 35236 17-03-17 19:09:33.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.378 -07 000000429 INF: FPGA: Recv ZSGSRD 35243 17-03-17 19:09:33.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.388 -07 000000547 INF: FPGA: Recv ZSGSRD 35237 17-03-17 19:09:33.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.398 -07 000000618 INF: FPGA: Recv ZSGSRD 35239 17-03-17 19:09:33.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.418 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.005817, 17-03-17 19:09:33.418 -07 000000502 INF: FPGA: Recv ZSGSRD 35240 17-03-17 19:09:33.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:33.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.448 -07 000000482 INF: FPGA: Recv ZSGSRD 35240 17-03-17 19:09:33.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-17 19:09:33.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:33.458 -07 000000618 INF: FPGA: Recv ZSGSRD 35238 17-03-17 19:09:33.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:33.478 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:33.478 -07 000000561 INF: FPGA: Recv ZPIEZORD 31101 17-03-17 19:09:33.488 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:33.488 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.556 V. Piezo Error = -9.1 V. 17-03-17 19:09:33.488 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.7 um, Read 10 ADC samples: Avg = 35239 (-165.8 uncal um), Error = 0.9 uncal um, Median = 35238 (-165.8 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35236 (-165.8 uncal um), Max = 35243 (-165.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-17 19:09:33.488 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35239, posNoise = 4, negNoise = 3 17-03-17 19:09:33.488 -07 000000610 INF: Z Motor: After move to -0.166693, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:33.488 -07 000000610 INF: Z Motor: MoveAbsStepped took 315 ms) 17-03-17 19:09:33.488 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:33.488 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:33.488 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:33.488 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:33.488 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:33.488 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:33.488 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:33.488 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:33.488 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:09:33.488 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:33.488 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:33.488 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:33.488 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:09:33.498 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:33.498 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:33.498 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:33.508 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-17 19:09:33.508 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms. 17-03-17 19:09:33.508 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms. 17-03-17 19:09:33.508 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-17 19:09:33.508 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 36591 150\n [Camera] 17-03-17 19:09:33.708 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 194 17-03-17 19:09:34.108 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:34.108 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:34.108 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:34.108 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:34.108 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:34.108 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:34.108 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:34.108 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-17 19:09:34.118 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:34.118 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start. 17-03-17 19:09:34.298 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36591 783 17-03-17 19:09:34.448 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:34.508 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 397 ms. 17-03-17 19:09:34.508 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms. 17-03-17 19:09:34.508 -07 000000547 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:34.518 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 398 ms. 17-03-17 19:09:34.518 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-17 19:09:34.518 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:34.518 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:34.518 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms. 17-03-17 19:09:34.518 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:34.528 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms. 17-03-17 19:09:34.638 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:34.638 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:34.638 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:34.748 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:34.748 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:34.748 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:34.748 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:34.748 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-17 19:09:34.748 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:34.748 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:09:34.828 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:09:34.828 -07 000000569 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:34.828 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 36591 150' command took 2 ms to send, 1317 ms to get response, and 1324 ms overall 17-03-17 19:09:34.828 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.167260 17-03-17 19:09:34.838 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16726 mm 17-03-17 19:09:34.838 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:34.838 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True) 17-03-17 19:09:34.838 -07 000000547 INF: Y Motor: Moving to 73.1926 mm, started at 72.3501 mm, delta = 0.8425 mm 17-03-17 19:09:34.838 -07 000000482 INF: Z Motor: Entering MoveAbsStepped (DAC = 36538, sync = True, waitForSettling = False) 17-03-17 19:09:34.838 -07 000000482 INF: Z Motor: Moving to -0.167260 mm, started at -0.166706 mm, distance = -0.55 um 17-03-17 19:09:34.838 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:34.838 -07 000000561 INF: FPGA: Recv YRDPOS 148173 17-03-17 19:09:34.848 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:34.848 -07 000000547 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:34.848 -07 000000547 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:34.848 -07 000000547 INF: Y Motor: Moving 1348 steps-26 17-03-17 19:09:34.848 -07 000000482 INF: FPGA: Xmit ZDACW 36538\n [Z Motor] 17-03-17 19:09:34.848 -07 000000502 INF: FPGA: Recv ZDACW 17-03-17 19:09:34.858 -07 000000482 INF: FPGA: 'ZDACW 36538' command took 0 ms to send, 0 ms to get response, and 16 ms overall 17-03-17 19:09:34.858 -07 000000482 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:34.858 -07 000000502 INF: FPGA: Recv ZDACR 36538 17-03-17 19:09:34.868 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:34.868 -07 000000482 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:34.868 -07 000000482 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet)) 17-03-17 19:09:35.148 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 398 ms. 17-03-17 19:09:35.148 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms. 17-03-17 19:09:35.148 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:35.148 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 397 ms. 17-03-17 19:09:35.148 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-17 19:09:35.148 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:35.148 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:35.148 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 512 ms. 17-03-17 19:09:35.158 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:35.158 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms. 17-03-17 19:09:35.238 -07 000000476 INF: FPGA: Recv YMVTILE 17-03-17 19:09:35.238 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 398 ms overall 17-03-17 19:09:35.278 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:35.278 -07 000000482 INF: FPGA: Recv YRDPOS 149866 17-03-17 19:09:35.288 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:35.288 -07 000000547 INF: Y Motor: Encoder = 149866 = motor step 117082.8 = 73.1768 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:35.288 -07 000000547 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm) 17-03-17 19:09:35.288 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.843 mm, average velocity = 2.117 mm/sec 17-03-17 19:09:36.238 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:36.238 -07 000000561 INF: FPGA: Recv YRDPOS 149866 17-03-17 19:09:36.248 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.248 -07 000000547 INF: Y Motor: Encoder = 149866 = motor step 117082.8 = 73.1768 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:36.268 -07 000000547 INF: Y Motor: After move to 73.192604, error = -0.015846, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:36.268 -07 000000547 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:09:36.268 -07 000000547 INF: Y Motor: Moved to 73.1768 after 1428 ms (table move) 17-03-17 19:09:36.268 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167260 mm (DAC = 36538) 17-03-17 19:09:36.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.268 -07 000000462 INF: FPGA: Recv ZSGSRD 35318 17-03-17 19:09:36.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:36.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.278 -07 000000482 INF: FPGA: Recv ZSGSRD 35321 17-03-17 19:09:36.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.288 -07 000000429 INF: FPGA: Recv ZSGSRD 35319 17-03-17 19:09:36.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.298 -07 000000561 INF: FPGA: Recv ZSGSRD 35324 17-03-17 19:09:36.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.308 -07 000000618 INF: FPGA: Recv ZSGSRD 35324 17-03-17 19:09:36.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.318 -07 000000476 INF: FPGA: Recv ZSGSRD 35336 17-03-17 19:09:36.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.328 -07 000000429 INF: FPGA: Recv ZSGSRD 35330 17-03-17 19:09:36.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.338 -07 000000502 INF: FPGA: Recv ZSGSRD 35319 17-03-17 19:09:36.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.348 -07 000000618 INF: FPGA: Recv ZSGSRD 35325 17-03-17 19:09:36.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.358 -07 000000561 INF: FPGA: Recv ZSGSRD 35326 17-03-17 19:09:36.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.368 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:36.368 -07 000000547 INF: FPGA: Recv ZPIEZORD 31233 17-03-17 19:09:36.378 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.378 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.575 V. Piezo Error = -9.0 V. 17-03-17 19:09:36.378 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.3 um, Read 10 ADC samples: Avg = 35324 (-166.4 uncal um), Error = 0.9 uncal um, Median = 35324 (-166.4 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 35318 (-166.3 uncal um), Max = 35336 (-166.5 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:09:36.378 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35324, posNoise = 12, negNoise = 6 17-03-17 19:09:36.378 -07 000000610 INF: Z Motor: After move to -0.167260, error = 0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:36.378 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 107 ms (allowed 150 ms), total time = 1537 ms 17-03-17 19:09:36.378 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:36.428 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1589 ms 17-03-17 19:09:36.428 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:36.428 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.1767578125, Z-position -0.167252221706699. ---------- 17-03-17 19:09:36.428 -07 000000610 INF: Cycle 22 Tile 17 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:36.428 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36361, sync = True, waitForSettling = True) 17-03-17 19:09:36.428 -07 000000610 INF: Z Motor: Moving to -0.166450 mm, started at -0.167252 mm, distance = 0.80 um 17-03-17 19:09:36.428 -07 000000610 INF: FPGA: Xmit ZDACW 36361\n [Z Motor] 17-03-17 19:09:36.428 -07 000000561 INF: FPGA: Recv ZDACW 17-03-17 19:09:36.438 -07 000000610 INF: FPGA: 'ZDACW 36361' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:09:36.438 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:36.438 -07 000000482 INF: FPGA: Recv ZDACR 36361 17-03-17 19:09:36.448 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.448 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:36.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.598 -07 000000618 INF: FPGA: Recv ZSGSRD 35198 17-03-17 19:09:36.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.608 -07 000000618 INF: FPGA: Recv ZSGSRD 35202 17-03-17 19:09:36.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.618 -07 000000547 INF: FPGA: Recv ZSGSRD 35203 17-03-17 19:09:36.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.628 -07 000000482 INF: FPGA: Recv ZSGSRD 35203 17-03-17 19:09:36.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.638 -07 000000618 INF: FPGA: Recv ZSGSRD 35201 17-03-17 19:09:36.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.648 -07 000000482 INF: FPGA: Recv ZSGSRD 35200 17-03-17 19:09:36.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.658 -07 000000547 INF: FPGA: Recv ZSGSRD 35202 17-03-17 19:09:36.658 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:36.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:36.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.668 -07 000000462 INF: FPGA: Recv ZSGSRD 35204 17-03-17 19:09:36.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.678 -07 000000547 INF: FPGA: Recv ZSGSRD 35199 17-03-17 19:09:36.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:36.688 -07 000000547 INF: FPGA: Recv ZSGSRD 35197 17-03-17 19:09:36.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.698 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:36.698 -07 000000618 INF: FPGA: Recv ZPIEZORD 31050 17-03-17 19:09:36.708 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:36.708 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.548 V. Piezo Error = -9.2 V. 17-03-17 19:09:36.708 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.4 um, Read 10 ADC samples: Avg = 35201 (-165.6 uncal um), Error = 0.9 uncal um, Median = 35202 (-165.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35197 (-165.6 uncal um), Max = 35204 (-165.6 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-17 19:09:36.708 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35201, posNoise = 3, negNoise = 4 17-03-17 19:09:36.708 -07 000000610 INF: Z Motor: After move to -0.166450, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:36.708 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-17 19:09:36.708 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:36.708 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:36.708 -07 000000482 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:36.708 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:36.708 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:36.708 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:36.708 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:36.708 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:36.708 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:36.708 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:36.708 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:09:36.708 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:36.718 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:09:36.718 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:36.718 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:36.718 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:36.728 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-17 19:09:36.728 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:09:36.728 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-17 19:09:36.728 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:09:36.738 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 36538 150\n [Camera] 17-03-17 19:09:36.938 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:37.328 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:37.328 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:37.338 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:37.338 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:37.338 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:37.338 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:37.338 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:37.338 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-17 19:09:37.338 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:37.338 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start. 17-03-17 19:09:37.528 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36538 783 17-03-17 19:09:37.678 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:37.708 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 373 ms. 17-03-17 19:09:37.708 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-17 19:09:37.708 -07 000000482 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:37.708 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 371 ms. 17-03-17 19:09:37.708 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-17 19:09:37.708 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:37.718 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:37.718 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-17 19:09:37.718 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:37.728 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-17 19:09:37.868 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:37.868 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:37.868 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:37.868 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:37.868 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:37.868 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:37.978 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:37.978 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start. 17-03-17 19:09:37.988 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:37.988 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-17 19:09:38.058 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:09:38.058 -07 000000618 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:38.058 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 36538 150' command took 2 ms to send, 1315 ms to get response, and 1323 ms overall 17-03-17 19:09:38.058 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166929 17-03-17 19:09:38.058 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16693 mm 17-03-17 19:09:38.058 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:38.058 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True) 17-03-17 19:09:38.058 -07 000000618 INF: Y Motor: Moving to 74.0226 mm, started at 73.1768 mm, delta = 0.8458 mm 17-03-17 19:09:38.058 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:38.068 -07 000000482 INF: Z Motor: Entering MoveAbsStepped (DAC = 36466, sync = True, waitForSettling = False) 17-03-17 19:09:38.068 -07 000000482 INF: Z Motor: Moving to -0.166931 mm, started at -0.166462 mm, distance = -0.47 um 17-03-17 19:09:38.068 -07 000000448 INF: FPGA: Recv YRDPOS 149866 17-03-17 19:09:38.078 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:38.078 -07 000000618 INF: Y Motor: Encoder = 149866 = motor step 117082.8 = 73.1768 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:38.078 -07 000000618 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:38.078 -07 000000618 INF: Y Motor: Moving 1353 steps-32 17-03-17 19:09:38.078 -07 000000482 INF: FPGA: Xmit ZDACW 36466\n [Z Motor] 17-03-17 19:09:38.078 -07 000000382 INF: FPGA: Recv ZDACW 17-03-17 19:09:38.088 -07 000000482 INF: FPGA: 'ZDACW 36466' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:38.088 -07 000000482 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:38.088 -07 000000448 INF: FPGA: Recv ZDACR 36466 17-03-17 19:09:38.098 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:38.098 -07 000000482 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:38.098 -07 000000482 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet)) 17-03-17 19:09:38.368 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 384 ms. 17-03-17 19:09:38.368 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-17 19:09:38.368 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:38.368 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 381 ms. 17-03-17 19:09:38.368 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms. 17-03-17 19:09:38.368 -07 000000547 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:38.368 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:38.368 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 501 ms. 17-03-17 19:09:38.368 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:38.378 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 505 ms. 17-03-17 19:09:38.468 -07 000000382 INF: FPGA: Recv YMVTILE 17-03-17 19:09:38.468 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-17 19:09:38.508 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:38.508 -07 000000547 INF: FPGA: Recv YRDPOS 151569 17-03-17 19:09:38.518 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-17 19:09:38.518 -07 000000618 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:38.518 -07 000000618 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm) 17-03-17 19:09:38.518 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.846 mm, average velocity = 2.131 mm/sec 17-03-17 19:09:38.818 -07 000000382 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.008536, 17-03-17 19:09:39.468 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:39.468 -07 000000561 INF: FPGA: Recv YRDPOS 151570 17-03-17 19:09:39.478 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:39.478 -07 000000618 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:39.488 -07 000000618 INF: Y Motor: After move to 74.022606, error = -0.013817, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:39.488 -07 000000618 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm) 17-03-17 19:09:39.488 -07 000000618 INF: Y Motor: Moved to 74.0088 after 1425 ms (table move) 17-03-17 19:09:39.488 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166931 mm (DAC = 36466) 17-03-17 19:09:39.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.498 -07 000000382 INF: FPGA: Recv ZSGSRD 35283 17-03-17 19:09:39.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-17 19:09:39.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.498 -07 000000382 INF: FPGA: Recv ZSGSRD 35275 17-03-17 19:09:39.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.508 -07 000000382 INF: FPGA: Recv ZSGSRD 35275 17-03-17 19:09:39.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.518 -07 000000482 INF: FPGA: Recv ZSGSRD 35274 17-03-17 19:09:39.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.528 -07 000000382 INF: FPGA: Recv ZSGSRD 35278 17-03-17 19:09:39.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.538 -07 000000382 INF: FPGA: Recv ZSGSRD 35280 17-03-17 19:09:39.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.548 -07 000000618 INF: FPGA: Recv ZSGSRD 35274 17-03-17 19:09:39.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.558 -07 000000618 INF: FPGA: Recv ZSGSRD 35278 17-03-17 19:09:39.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.568 -07 000000382 INF: FPGA: Recv ZSGSRD 35274 17-03-17 19:09:39.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.578 -07 000000618 INF: FPGA: Recv ZSGSRD 35273 17-03-17 19:09:39.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.588 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:39.588 -07 000000382 INF: FPGA: Recv ZPIEZORD 31155 17-03-17 19:09:39.598 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.598 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.564 V. Piezo Error = -9.1 V. 17-03-17 19:09:39.598 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.9 um, Read 10 ADC samples: Avg = 35276 (-166.1 uncal um), Error = 0.9 uncal um, Median = 35275 (-166.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35273 (-166.1 uncal um), Max = 35283 (-166.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-17 19:09:39.598 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35276, posNoise = 7, negNoise = 3 17-03-17 19:09:39.598 -07 000000610 INF: Z Motor: After move to -0.166931, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:39.598 -07 000000610 INF: Z Motor: Settle wait time = 1427 ms, measure time = 103 ms (allowed 150 ms), total time = 1530 ms 17-03-17 19:09:39.598 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:39.648 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1582 ms 17-03-17 19:09:39.648 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:39.648 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0087890625, Z-position -0.166943859523894. ---------- 17-03-17 19:09:39.648 -07 000000610 INF: Cycle 22 Tile 18 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:39.648 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36289, sync = True, waitForSettling = True) 17-03-17 19:09:39.648 -07 000000610 INF: Z Motor: Moving to -0.166120 mm, started at -0.166944 mm, distance = 0.82 um 17-03-17 19:09:39.648 -07 000000610 INF: FPGA: Xmit ZDACW 36289\n [Z Motor] 17-03-17 19:09:39.658 -07 000000478 INF: FPGA: Recv ZDACW 17-03-17 19:09:39.658 -07 000000610 INF: FPGA: 'ZDACW 36289' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:09:39.658 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:39.658 -07 000000448 INF: FPGA: Recv ZDACR 36289 17-03-17 19:09:39.668 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.668 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:39.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.818 -07 000000448 INF: FPGA: Recv ZSGSRD 35148 17-03-17 19:09:39.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:39.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.828 -07 000000448 INF: FPGA: Recv ZSGSRD 35151 17-03-17 19:09:39.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.838 -07 000000618 INF: FPGA: Recv ZSGSRD 35141 17-03-17 19:09:39.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.848 -07 000000478 INF: FPGA: Recv ZSGSRD 35154 17-03-17 19:09:39.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.858 -07 000000618 INF: FPGA: Recv ZSGSRD 35153 17-03-17 19:09:39.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.868 -07 000000478 INF: FPGA: Recv ZSGSRD 35148 17-03-17 19:09:39.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.878 -07 000000478 INF: FPGA: Recv ZSGSRD 35152 17-03-17 19:09:39.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.888 -07 000000478 INF: FPGA: Recv ZSGSRD 35150 17-03-17 19:09:39.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.898 -07 000000478 INF: FPGA: Recv ZSGSRD 35146 17-03-17 19:09:39.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:39.908 -07 000000478 INF: FPGA: Recv ZSGSRD 35144 17-03-17 19:09:39.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.918 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:39.918 -07 000000478 INF: FPGA: Recv ZPIEZORD 30972 17-03-17 19:09:39.928 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:39.928 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.537 V. Piezo Error = -9.2 V. 17-03-17 19:09:39.928 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.1 um, Read 10 ADC samples: Avg = 35149 (-165.3 uncal um), Error = 0.9 uncal um, Median = 35149 (-165.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35141 (-165.2 uncal um), Max = 35154 (-165.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-17 19:09:39.928 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35149, posNoise = 5, negNoise = 8 17-03-17 19:09:39.928 -07 000000610 INF: Z Motor: After move to -0.166120, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:39.928 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-17 19:09:39.928 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:39.928 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:39.928 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:39.928 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:39.928 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:39.928 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:39.928 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:39.928 -07 000000448 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:39.928 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:09:39.928 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:39.928 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:39.928 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:39.938 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-17 19:09:39.938 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:39.938 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:39.938 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:39.948 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-17 19:09:39.948 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms. 17-03-17 19:09:39.948 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-17 19:09:39.948 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-17 19:09:39.948 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 36466 150\n [Camera] 17-03-17 19:09:40.158 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 196 17-03-17 19:09:40.548 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:40.548 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:40.548 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:40.558 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:40.558 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-17 19:09:40.558 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:40.558 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:40.558 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:40.558 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:40.558 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-17 19:09:40.748 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36466 783 17-03-17 19:09:40.888 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:40.958 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 400 ms. 17-03-17 19:09:40.958 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-17 19:09:40.958 -07 000000448 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:40.958 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:40.958 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 410 ms. 17-03-17 19:09:40.968 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 403 ms. 17-03-17 19:09:40.968 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms. 17-03-17 19:09:40.968 -07 000000547 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:40.968 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:40.978 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 421 ms. 17-03-17 19:09:41.088 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:41.088 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:41.088 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:41.088 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:41.088 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:41.088 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:41.088 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:41.088 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-17 19:09:41.088 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:41.088 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start. 17-03-17 19:09:41.278 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:09:41.278 -07 000000547 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:41.278 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 36466 150' command took 2 ms to send, 1313 ms to get response, and 1323 ms overall 17-03-17 19:09:41.278 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-17 19:09:41.278 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.0087890625, Z-Position -0.166127984581891. ------ 17-03-17 19:09:41.278 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:09:41.288 -07 000000561 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.17252 mm 17-03-17 19:09:41.288 -07 000000561 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:41.288 -07 000000547 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:09:41.288 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-17 19:09:41.288 -07 000000482 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:09:41.288 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True) 17-03-17 19:09:41.288 -07 000000547 INF: Y Motor: Moving to 74.8526 mm, started at 74.0088 mm, delta = 0.8438 mm 17-03-17 19:09:41.298 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:41.468 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 376 ms. 17-03-17 19:09:41.468 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-17 19:09:41.468 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:41.468 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 379 ms. 17-03-17 19:09:41.468 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-17 19:09:41.468 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:41.468 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:41.468 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-17 19:09:41.468 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:41.478 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-17 19:09:41.478 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 37688, sync = True, waitForSettling = False) 17-03-17 19:09:41.478 -07 000000462 INF: Z Motor: Moving to -0.172525 mm, started at -0.166128 mm, distance = -6.40 um 17-03-17 19:09:41.478 -07 000000462 INF: FPGA: Xmit ZDACW 37688\n [Z Motor] 17-03-17 19:09:41.488 -07 000000618 INF: FPGA: Recv YRDPOS 151570 17-03-17 19:09:41.488 -07 000000618 INF: FPGA: Recv ZDACW 17-03-17 19:09:41.488 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 184 ms to get response, and 199 ms overall 17-03-17 19:09:41.488 -07 000000462 INF: FPGA: 'ZDACW 37688' command took 0 ms to send, 4 ms to get response, and 6 ms overall 17-03-17 19:09:41.488 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:41.488 -07 000000547 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:41.488 -07 000000547 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:41.488 -07 000000547 INF: Y Motor: Moving 1350 steps-29 17-03-17 19:09:41.488 -07 000000618 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:09:41.488 -07 000000482 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 202 ms overall 17-03-17 19:09:41.488 -07 000000618 INF: FPGA: Recv ZDACR 37688 17-03-17 19:09:41.498 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:09:41.498 -07 000000462 INF: Z Motor: MoveAbsStepped took 11 ms (did NOT wait for settling yet)) 17-03-17 19:09:41.498 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:41.658 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:41.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:41.868 -07 000000462 INF: FPGA: Recv YMVTILE 17-03-17 19:09:41.868 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 383 ms overall 17-03-17 19:09:41.898 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:41.898 -07 000000618 INF: FPGA: Recv YRDPOS 153257 17-03-17 19:09:41.908 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:41.908 -07 000000547 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:41.908 -07 000000547 INF: Y Motor: Position error before settling (table move) = -41 encoder counts (-0.020 mm) 17-03-17 19:09:41.908 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.844 mm, average velocity = 2.203 mm/sec 17-03-17 19:09:42.858 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:42.858 -07 000000482 INF: FPGA: Recv YRDPOS 153257 17-03-17 19:09:42.868 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:42.868 -07 000000547 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:42.878 -07 000000547 INF: Y Motor: After move to 74.852608, error = -0.020088, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:42.878 -07 000000547 INF: Y Motor: Position error after settling (table move) = -41 encoder counts (-0.020 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:09:42.878 -07 000000547 INF: Y Motor: Moved to 74.8325 after 1589 ms (table move) 17-03-17 19:09:42.878 -07 000000561 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172525 mm (DAC = 37688) 17-03-17 19:09:42.878 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:42.888 -07 000000462 INF: FPGA: Recv ZSGSRD 36145 17-03-17 19:09:42.888 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-17 19:09:42.888 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:42.888 -07 000000482 INF: FPGA: Recv ZSGSRD 36151 17-03-17 19:09:42.898 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:42.898 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:42.898 -07 000000482 INF: FPGA: Recv ZSGSRD 36141 17-03-17 19:09:42.908 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:42.908 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:42.908 -07 000000618 INF: FPGA: Recv ZSGSRD 36140 17-03-17 19:09:42.918 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:42.918 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:42.918 -07 000000462 INF: FPGA: Recv ZSGSRD 36141 17-03-17 19:09:42.928 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:42.928 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:42.928 -07 000000462 INF: FPGA: Recv ZSGSRD 36149 17-03-17 19:09:42.938 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:42.938 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:42.938 -07 000000482 INF: FPGA: Recv ZSGSRD 36152 17-03-17 19:09:42.948 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:42.948 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:42.948 -07 000000618 INF: FPGA: Recv ZSGSRD 36150 17-03-17 19:09:42.958 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:42.958 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:42.958 -07 000000482 INF: FPGA: Recv ZSGSRD 36148 17-03-17 19:09:42.968 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:42.968 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:42.968 -07 000000462 INF: FPGA: Recv ZSGSRD 36144 17-03-17 19:09:42.978 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:42.978 -07 000000561 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:42.978 -07 000000547 INF: FPGA: Recv ZPIEZORD 32306 17-03-17 19:09:42.988 -07 000000561 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:42.988 -07 000000561 INF: Z Motor: Piezo is near 49.0 V (nominally 0 to 100 V), expect near 57.5 V, since DAC is at 5.751 V. Piezo Error = -8.5 V. 17-03-17 19:09:42.988 -07 000000561 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.5 um, Read 10 ADC samples: Avg = 36146 (-171.7 uncal um), Error = 0.9 uncal um, Median = 36146 (-171.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36140 (-171.6 uncal um), Max = 36152 (-171.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:09:42.988 -07 000000561 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36146, posNoise = 6, negNoise = 6 17-03-17 19:09:42.988 -07 000000561 INF: Z Motor: After move to -0.172525, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:42.988 -07 000000561 INF: Z Motor: Settle wait time = 1399 ms, measure time = 103 ms (allowed 150 ms), total time = 1502 ms 17-03-17 19:09:42.988 -07 000000561 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:43.038 -07 000000561 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1750 ms 17-03-17 19:09:43.038 -07 000000561 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:43.038 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:43.038 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:43.038 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:43.038 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:43.038 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:09:43.038 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:43.038 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-17 19:09:43.038 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:09:43.048 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-17 19:09:43.048 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:09:43.058 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-17 19:09:43.058 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms. 17-03-17 19:09:43.058 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:09:43.108 -07 000000482 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:09:43.308 -07 000000462 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:09:43.308 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:09:43.308 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:09:43.308 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610603336, 0x0, 559484976) start. 17-03-17 19:09:43.348 -07 000000547 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:09:43.348 -07 000000561 INF: FPGA: Recv CAMSNAP 17-03-17 19:09:43.348 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 282 ms to get response, and 284 ms overall 17-03-17 19:09:43.428 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610603336, 0x0, 559484976) end. Duration was 123 ms. 17-03-17 19:09:43.428 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:43.428 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-17 19:09:43.428 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 126 ms. 17-03-17 19:09:43.448 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:09:43.448 -07 000000462 INF: Autofocus start 17-03-17 19:09:43.448 -07 000000462 INF: MeasureProfile start 17-03-17 19:09:43.458 -07 000000547 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:09:43.458 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 6 ms overall 17-03-17 19:09:43.458 -07 000000627 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:09:43.458 -07 000000462 INF: MeasureProfile done 17-03-17 19:09:43.458 -07 000000462 INF: X=48 Z correction [um]=0.1739867 17-03-17 19:09:43.458 -07 000000462 INF: Autofocus finished 17-03-17 19:09:43.658 -07 000000618 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:09:43.658 -07 000000627 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 202 ms overall 17-03-17 19:09:43.658 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83251953125, Z-position -0.172532924087227. ---------- 17-03-17 19:09:43.658 -07 000000610 INF: Cycle 22 Tile 19 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:43.668 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36239, sync = True, waitForSettling = True) 17-03-17 19:09:43.668 -07 000000610 INF: Z Motor: Moving to -0.165892 mm, started at -0.172533 mm, distance = 6.64 um 17-03-17 19:09:43.668 -07 000000610 INF: FPGA: Xmit ZDACW 36239\n [Z Motor] 17-03-17 19:09:43.668 -07 000000502 INF: FPGA: Recv ZDACW 17-03-17 19:09:43.678 -07 000000610 INF: FPGA: 'ZDACW 36239' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:43.678 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:43.678 -07 000000569 INF: FPGA: Recv ZDACR 36239 17-03-17 19:09:43.688 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:43.688 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:43.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:43.838 -07 000000618 INF: FPGA: Recv ZSGSRD 35114 17-03-17 19:09:43.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:43.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:43.848 -07 000000547 INF: FPGA: Recv ZSGSRD 35117 17-03-17 19:09:43.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:43.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:43.868 -07 000000462 INF: FPGA: Recv ZSGSRD 35114 17-03-17 19:09:43.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:43.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:43.878 -07 000000561 INF: FPGA: Recv ZSGSRD 35111 17-03-17 19:09:43.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:43.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:43.888 -07 000000561 INF: FPGA: Recv ZSGSRD 35111 17-03-17 19:09:43.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:43.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:43.898 -07 000000569 INF: FPGA: Recv ZSGSRD 35116 17-03-17 19:09:43.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:43.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:43.908 -07 000000618 INF: FPGA: Recv ZSGSRD 35107 17-03-17 19:09:43.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:43.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:43.918 -07 000000502 INF: FPGA: Recv ZSGSRD 35110 17-03-17 19:09:43.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:43.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:43.928 -07 000000547 INF: FPGA: Recv ZSGSRD 35117 17-03-17 19:09:43.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:43.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:43.938 -07 000000462 INF: FPGA: Recv ZSGSRD 35112 17-03-17 19:09:43.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:43.948 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:43.948 -07 000000462 INF: FPGA: Recv ZPIEZORD 30980 17-03-17 19:09:43.958 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:43.958 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.530 V. Piezo Error = -9.1 V. 17-03-17 19:09:43.958 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.9 um, Read 10 ADC samples: Avg = 35113 (-165.0 uncal um), Error = 0.9 uncal um, Median = 35113 (-165.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35107 (-165.0 uncal um), Max = 35117 (-165.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:09:43.958 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35113, posNoise = 4, negNoise = 6 17-03-17 19:09:43.958 -07 000000610 INF: Z Motor: After move to -0.165892, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:43.958 -07 000000610 INF: Z Motor: MoveAbsStepped took 287 ms) 17-03-17 19:09:43.958 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:43.958 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:43.958 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:43.958 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:43.958 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:43.958 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:43.958 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:43.958 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:43.958 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:43.958 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:43.958 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:09:43.958 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:43.968 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:43.968 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:43.968 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-17 19:09:43.968 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:43.978 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-17 19:09:43.978 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:09:43.978 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:09:43.978 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:09:43.978 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 36415 150\n [Camera] 17-03-17 19:09:44.178 -07 000000476 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.004458, 17-03-17 19:09:44.178 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:44.578 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:44.578 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:44.578 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:44.578 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:44.578 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) start. 17-03-17 19:09:44.588 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:44.588 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:44.588 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:44.588 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:44.588 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start. 17-03-17 19:09:44.778 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36415 783 17-03-17 19:09:44.918 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:44.958 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) end. Duration was 376 ms. 17-03-17 19:09:44.958 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-17 19:09:44.958 -07 000000482 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:44.958 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 375 ms. 17-03-17 19:09:44.958 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-17 19:09:44.958 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:44.968 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:44.968 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-17 19:09:44.968 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-17 19:09:44.978 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-17 19:09:45.118 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:45.118 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:45.118 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:45.118 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:45.118 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start. 17-03-17 19:09:45.118 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:45.118 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:45.118 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:45.118 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:45.118 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1064702000, 0x0, 418435064) start. 17-03-17 19:09:45.308 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:09:45.308 -07 000000462 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:45.308 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 36415 150' command took 2 ms to send, 1313 ms to get response, and 1323 ms overall 17-03-17 19:09:45.498 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1064702000, 0x0, 418435064) end. Duration was 381 ms. 17-03-17 19:09:45.498 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms. 17-03-17 19:09:45.498 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:45.508 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:45.508 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 387 ms. 17-03-17 19:09:45.508 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-17 19:09:45.508 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:45.508 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:45.508 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-17 19:09:45.508 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start. 17-03-17 19:09:45.508 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-17 19:09:45.548 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms. 17-03-17 19:09:45.548 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start. 17-03-17 19:09:45.588 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms. 17-03-17 19:09:45.598 -07 000000610 INF: Move compensator for Bottom-surface imaging. 17-03-17 19:09:45.598 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator] 17-03-17 19:09:45.598 -07 000000462 INF: FPGA: Recv EMCUR 17-03-17 19:09:45.608 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:09:45.608 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator] 17-03-17 19:09:46.108 -07 000000569 INF: FPGA: Recv EMIN 17-03-17 19:09:46.108 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 496 ms to get response, and 506 ms overall 17-03-17 19:09:46.108 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator] 17-03-17 19:09:46.108 -07 000000618 INF: FPGA: Recv EMCUR 17-03-17 19:09:46.118 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-17 19:09:46.118 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-17 19:09:46.118 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83251953125, Z-Position -0.165896712944787. ------ 17-03-17 19:09:46.118 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:09:46.118 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.14037 mm 17-03-17 19:09:46.118 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:46.118 -07 000000627 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:09:46.118 -07 000000476 INF: Z Motor: Entering MoveAbsStepped (DAC = 30665, sync = True, waitForSettling = False) 17-03-17 19:09:46.118 -07 000000476 INF: Z Motor: Moving to -0.140375 mm, started at -0.165897 mm, distance = 25.52 um 17-03-17 19:09:46.118 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True) 17-03-17 19:09:46.118 -07 000000429 INF: Y Motor: Moving to 59.9126 mm, started at 74.8325 mm, delta = -14.9199 mm 17-03-17 19:09:46.128 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:09:46.128 -07 000000476 INF: FPGA: Xmit ZDACW 30665\n [Z Motor] 17-03-17 19:09:46.128 -07 000000627 INF: FPGA: Recv ZDACW 17-03-17 19:09:46.138 -07 000000476 INF: FPGA: 'ZDACW 30665' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-17 19:09:46.138 -07 000000476 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:46.138 -07 000000482 INF: FPGA: Recv ZDACR 30665 17-03-17 19:09:46.148 -07 000000476 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:46.148 -07 000000476 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet)) 17-03-17 19:09:46.148 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:46.148 -07 000000476 INF: FPGA: Recv YRDPOS 153259 17-03-17 19:09:46.158 -07 000000429 INF: FPGA: 'YRDPOS' command took 3 ms to send, 0 ms to get response, and 30 ms overall 17-03-17 19:09:46.158 -07 000000429 INF: Y Motor: Encoder = 153259 = motor step 119733.6 = 74.8335 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:46.158 -07 000000569 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:09:46.158 -07 000000429 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False 17-03-17 19:09:46.158 -07 000000429 INF: Y Motor: Moving to 122701 encoder counts 17-03-17 19:09:46.168 -07 000000429 INF: FPGA: Xmit YMVTO 122701\n [Y Motor] 17-03-17 19:09:46.358 -07 000000476 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:09:46.358 -07 000000569 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 233 ms overall 17-03-17 19:09:46.658 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:46.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:47.788 -07 000000482 INF: FPGA: Recv YMVTO 122703 23904 17-03-17 19:09:47.788 -07 000000429 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1618 ms to get response, and 1636 ms overall 17-03-17 19:09:47.788 -07 000000429 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm) 17-03-17 19:09:47.788 -07 000000429 INF: Y Motor: To move from 74.833 to 59.913 (-14.920 mm) should take 23873 steps, but required 23904 steps (14.940 mm). Slippage = 0.019 mm (0.00%). 17-03-17 19:09:47.788 -07 000000429 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1636 ms, distance = 14.920 mm, average velocity = 9.120 mm/sec 17-03-17 19:09:49.538 -07 000000482 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.039839, 17-03-17 19:09:50.638 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:50.638 -07 000000482 INF: FPGA: Recv YRDPOS 122699 17-03-17 19:09:50.648 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:50.648 -07 000000429 INF: Y Motor: Encoder = 122699 = motor step 95858.6 = 59.9116 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:50.668 -07 000000429 INF: Y Motor: After move to 59.912609, error = -0.000988, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:50.668 -07 000000429 INF: Y Motor: Position error after settling = -2 encoder counts (-0.001 mm), Delta during settling = -4 counts (-0.002 mm) 17-03-17 19:09:50.668 -07 000000429 INF: Y Motor: Moved to 59.9116 after 4548 ms 17-03-17 19:09:50.678 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.140375 mm (DAC = 30665) 17-03-17 19:09:50.678 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:50.678 -07 000000569 INF: FPGA: Recv ZSGSRD 31146 17-03-17 19:09:50.688 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:09:50.688 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:50.688 -07 000000429 INF: FPGA: Recv ZSGSRD 31143 17-03-17 19:09:50.698 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:50.698 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:50.698 -07 000000482 INF: FPGA: Recv ZSGSRD 31142 17-03-17 19:09:50.708 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:50.708 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:50.708 -07 000000429 INF: FPGA: Recv ZSGSRD 31139 17-03-17 19:09:50.718 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:50.718 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:50.718 -07 000000482 INF: FPGA: Recv ZSGSRD 31140 17-03-17 19:09:50.728 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:50.728 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:50.728 -07 000000476 INF: FPGA: Recv ZSGSRD 31145 17-03-17 19:09:50.738 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:50.738 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:50.738 -07 000000482 INF: FPGA: Recv ZSGSRD 31141 17-03-17 19:09:50.748 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:50.748 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:50.748 -07 000000429 INF: FPGA: Recv ZSGSRD 31136 17-03-17 19:09:50.758 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:50.758 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:50.758 -07 000000429 INF: FPGA: Recv ZSGSRD 31146 17-03-17 19:09:50.768 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:50.768 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:50.768 -07 000000429 INF: FPGA: Recv ZSGSRD 31142 17-03-17 19:09:50.778 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:50.778 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:50.778 -07 000000482 INF: FPGA: Recv ZPIEZORD 26724 17-03-17 19:09:50.788 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:50.788 -07 000000502 INF: Z Motor: Piezo is near 37.1 V (nominally 0 to 100 V), expect near 46.8 V, since DAC is at 4.679 V. Piezo Error = -9.7 V. 17-03-17 19:09:50.788 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -140.4 um, Read 10 ADC samples: Avg = 31142 (-139.6 uncal um), Error = 0.8 uncal um, Median = 31142 (-139.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 31136 (-139.5 uncal um), Max = 31146 (-139.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:09:50.788 -07 000000502 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31142, posNoise = 4, negNoise = 6 17-03-17 19:09:50.788 -07 000000502 INF: Z Motor: After move to -0.140375, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:50.788 -07 000000502 INF: Z Motor: Settle wait time = 4553 ms, measure time = 108 ms (allowed 150 ms), total time = 4661 ms 17-03-17 19:09:50.788 -07 000000502 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:50.838 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4714 ms 17-03-17 19:09:50.838 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:50.838 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:50.838 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:50.838 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:50.838 -07 000000429 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:09:50.838 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:50.848 -07 000000476 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:50.848 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:50.848 -07 000000429 INF: Camera: sBCa_SetPowerMode(785074288, 1) start. 17-03-17 19:09:50.868 -07 000000429 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms. 17-03-17 19:09:50.868 -07 000000429 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:09:50.868 -07 000000429 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms. 17-03-17 19:09:50.868 -07 000000429 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:09:50.888 -07 000000429 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-17 19:09:50.888 -07 000000429 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms. 17-03-17 19:09:50.888 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:09:50.928 -07 000000482 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:09:51.128 -07 000000476 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:09:51.128 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:09:51.128 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:09:51.138 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start. 17-03-17 19:09:51.168 -07 000000478 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:09:51.168 -07 000000382 INF: FPGA: Recv CAMSNAP 17-03-17 19:09:51.168 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 284 ms overall 17-03-17 19:09:51.248 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 114 ms. 17-03-17 19:09:51.248 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:51.248 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-17 19:09:51.258 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 123 ms. 17-03-17 19:09:51.268 -07 000000593 INF: Image SNR check: start 17-03-17 19:09:51.268 -07 000000502 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:09:51.268 -07 000000429 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:09:51.278 -07 000000502 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:09:51.278 -07 000000502 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:09:51.278 -07 000000593 INF: Image SNR check: pass [peak (Max-Min)=65.30] 17-03-17 19:09:51.278 -07 000000593 INF: Autofocus start 17-03-17 19:09:51.278 -07 000000593 INF: MeasureProfile start 17-03-17 19:09:51.298 -07 000000593 INF: MeasureProfile done 17-03-17 19:09:51.298 -07 000000593 INF: X=32 Z correction [um]=0.1299841 17-03-17 19:09:51.298 -07 000000593 INF: Autofocus finished 17-03-17 19:09:51.478 -07 000000382 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:09:51.478 -07 000000502 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-17 19:09:51.478 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91162109375, Z-position -0.140386166529855. ---------- 17-03-17 19:09:51.478 -07 000000610 INF: Cycle 22 Tile 1 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:51.488 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29206, sync = True, waitForSettling = True) 17-03-17 19:09:51.488 -07 000000610 INF: Z Motor: Moving to -0.133696 mm, started at -0.140386 mm, distance = 6.69 um 17-03-17 19:09:51.488 -07 000000610 INF: FPGA: Xmit ZDACW 29206\n [Z Motor] 17-03-17 19:09:51.488 -07 000000569 INF: FPGA: Recv ZDACW 17-03-17 19:09:51.498 -07 000000610 INF: FPGA: 'ZDACW 29206' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.498 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:51.498 -07 000000593 INF: FPGA: Recv ZDACR 29206 17-03-17 19:09:51.508 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.508 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:51.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:51.658 -07 000000478 INF: FPGA: Recv ZSGSRD 30099 17-03-17 19:09:51.658 -07 000000593 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:51.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:51.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:51.668 -07 000000382 INF: FPGA: Recv ZSGSRD 30096 17-03-17 19:09:51.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:51.678 -07 000000482 INF: FPGA: Recv ZSGSRD 30102 17-03-17 19:09:51.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:51.688 -07 000000569 INF: FPGA: Recv ZSGSRD 30101 17-03-17 19:09:51.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:51.698 -07 000000476 INF: FPGA: Recv ZSGSRD 30105 17-03-17 19:09:51.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:51.708 -07 000000429 INF: FPGA: Recv ZSGSRD 30103 17-03-17 19:09:51.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:51.718 -07 000000476 INF: FPGA: Recv ZSGSRD 30100 17-03-17 19:09:51.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:51.728 -07 000000478 INF: FPGA: Recv ZSGSRD 30101 17-03-17 19:09:51.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:51.738 -07 000000593 INF: FPGA: Recv ZSGSRD 30100 17-03-17 19:09:51.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:51.758 -07 000000593 INF: FPGA: Recv ZSGSRD 30101 17-03-17 19:09:51.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:51.768 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:51.768 -07 000000593 INF: FPGA: Recv ZPIEZORD 25675 17-03-17 19:09:51.778 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:51.778 -07 000000610 INF: Z Motor: Piezo is near 34.8 V (nominally 0 to 100 V), expect near 44.6 V, since DAC is at 4.457 V. Piezo Error = -9.7 V. 17-03-17 19:09:51.778 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.7 um, Read 10 ADC samples: Avg = 30101 (-132.9 uncal um), Error = 0.8 uncal um, Median = 30101 (-132.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 30096 (-132.9 uncal um), Max = 30105 (-132.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:09:51.778 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30101, posNoise = 4, negNoise = 5 17-03-17 19:09:51.778 -07 000000610 INF: Z Motor: After move to -0.133696, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:51.778 -07 000000610 INF: Z Motor: MoveAbsStepped took 291 ms) 17-03-17 19:09:51.778 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:51.778 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:51.778 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:51.778 -07 000000482 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:51.778 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:51.778 -07 000000478 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:51.788 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:51.788 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:51.788 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:09:51.788 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074704, 1) start. 17-03-17 19:09:51.788 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-17 19:09:51.788 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:51.788 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:51.788 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:51.808 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-17 19:09:51.808 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:09:51.808 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 22 ms. 17-03-17 19:09:51.808 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:51.808 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-17 19:09:51.808 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:51.818 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-17 19:09:51.818 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 36 ms. 17-03-17 19:09:51.818 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 29383 150\n [Camera] 17-03-17 19:09:52.018 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:52.418 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:52.418 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:52.418 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:52.428 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:52.428 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:52.428 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:52.428 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:52.428 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-17 19:09:52.428 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:52.428 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2468351704, 0x0, 418435064) start. 17-03-17 19:09:52.618 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29383 784 17-03-17 19:09:52.758 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:52.798 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2468351704, 0x0, 418435064) end. Duration was 369 ms. 17-03-17 19:09:52.798 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms. 17-03-17 19:09:52.798 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:52.798 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:52.808 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 377 ms. 17-03-17 19:09:52.808 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms. 17-03-17 19:09:52.808 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:52.808 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:52.808 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-17 19:09:52.808 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms. 17-03-17 19:09:52.958 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:52.958 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:52.958 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:52.958 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:52.958 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:52.958 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:53.068 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:53.068 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-17 19:09:53.068 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:53.068 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 589594896, 0x0, 418435064) start. 17-03-17 19:09:53.148 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:09:53.148 -07 000000429 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:53.148 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 29383 150' command took 2 ms to send, 1313 ms to get response, and 1324 ms overall 17-03-17 19:09:53.148 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.134155 17-03-17 19:09:53.148 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13415 mm 17-03-17 19:09:53.148 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:53.148 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True) 17-03-17 19:09:53.148 -07 000000382 INF: Y Motor: Moving to 60.7426 mm, started at 59.9116 mm, delta = 0.8310 mm 17-03-17 19:09:53.148 -07 000000482 INF: Z Motor: Entering MoveAbsStepped (DAC = 29306, sync = True, waitForSettling = False) 17-03-17 19:09:53.148 -07 000000482 INF: Z Motor: Moving to -0.134154 mm, started at -0.133699 mm, distance = -0.46 um 17-03-17 19:09:53.148 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:53.158 -07 000000482 INF: FPGA: Xmit ZDACW 29306\n [Z Motor] 17-03-17 19:09:53.158 -07 000000476 INF: FPGA: Recv YRDPOS 122699 17-03-17 19:09:53.158 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 4 ms to get response, and 6 ms overall 17-03-17 19:09:53.158 -07 000000382 INF: Y Motor: Encoder = 122699 = motor step 95858.6 = 59.9116 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:53.158 -07 000000382 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:53.158 -07 000000382 INF: Y Motor: Moving 1330 steps2 17-03-17 19:09:53.158 -07 000000569 INF: FPGA: Recv ZDACW 17-03-17 19:09:53.168 -07 000000482 INF: FPGA: 'ZDACW 29306' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-17 19:09:53.168 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:53.178 -07 000000482 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:53.178 -07 000000569 INF: FPGA: Recv ZDACR 29306 17-03-17 19:09:53.188 -07 000000482 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:53.188 -07 000000482 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet)) 17-03-17 19:09:53.468 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 402 ms. 17-03-17 19:09:53.468 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms. 17-03-17 19:09:53.468 -07 000000478 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:53.468 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 589594896, 0x0, 418435064) end. Duration was 400 ms. 17-03-17 19:09:53.468 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-17 19:09:53.468 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:53.478 -07 000000478 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:53.478 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 515 ms. 17-03-17 19:09:53.478 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:53.478 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 519 ms. 17-03-17 19:09:53.538 -07 000000429 INF: FPGA: Recv YMVTILE 17-03-17 19:09:53.538 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall 17-03-17 19:09:53.568 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:53.568 -07 000000478 INF: FPGA: Recv YRDPOS 124382 17-03-17 19:09:53.578 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:09:53.578 -07 000000382 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:53.578 -07 000000382 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm) 17-03-17 19:09:53.578 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.831 mm, average velocity = 2.170 mm/sec 17-03-17 19:09:54.528 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:54.528 -07 000000593 INF: FPGA: Recv YRDPOS 124383 17-03-17 19:09:54.538 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:54.538 -07 000000382 INF: Y Motor: Encoder = 124383 = motor step 97174.2 = 60.7339 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:54.558 -07 000000382 INF: Y Motor: After move to 60.742607, error = -0.008720, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:54.558 -07 000000382 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm) 17-03-17 19:09:54.558 -07 000000382 INF: Y Motor: Moved to 60.7339 after 1402 ms (table move) 17-03-17 19:09:54.558 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134154 mm (DAC = 29306) 17-03-17 19:09:54.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.558 -07 000000476 INF: FPGA: Recv ZSGSRD 30182 17-03-17 19:09:54.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:54.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.568 -07 000000593 INF: FPGA: Recv ZSGSRD 30171 17-03-17 19:09:54.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.588 -07 000000502 INF: FPGA: Recv ZSGSRD 30171 17-03-17 19:09:54.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:54.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.598 -07 000000382 INF: FPGA: Recv ZSGSRD 30178 17-03-17 19:09:54.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.608 -07 000000382 INF: FPGA: Recv ZSGSRD 30181 17-03-17 19:09:54.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.618 -07 000000569 INF: FPGA: Recv ZSGSRD 30173 17-03-17 19:09:54.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.628 -07 000000593 INF: FPGA: Recv ZSGSRD 30167 17-03-17 19:09:54.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.638 -07 000000502 INF: FPGA: Recv ZSGSRD 30170 17-03-17 19:09:54.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.648 -07 000000478 INF: FPGA: Recv ZSGSRD 30178 17-03-17 19:09:54.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.658 -07 000000502 INF: FPGA: Recv ZSGSRD 30168 17-03-17 19:09:54.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.668 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:54.668 -07 000000478 INF: FPGA: Recv ZPIEZORD 25820 17-03-17 19:09:54.678 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.678 -07 000000610 INF: Z Motor: Piezo is near 35.2 V (nominally 0 to 100 V), expect near 44.7 V, since DAC is at 4.472 V. Piezo Error = -9.6 V. 17-03-17 19:09:54.678 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.2 um, Read 10 ADC samples: Avg = 30174 (-133.4 uncal um), Error = 0.8 uncal um, Median = 30172 (-133.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30167 (-133.3 uncal um), Max = 30182 (-133.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-17 19:09:54.678 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30174, posNoise = 8, negNoise = 7 17-03-17 19:09:54.678 -07 000000610 INF: Z Motor: After move to -0.134154, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:54.678 -07 000000610 INF: Z Motor: Settle wait time = 1404 ms, measure time = 118 ms (allowed 150 ms), total time = 1522 ms 17-03-17 19:09:54.678 -07 000000610 INF: Z Motor: Waiting extra 32 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:54.718 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1564 ms 17-03-17 19:09:54.718 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:54.718 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73388671875, Z-position -0.13416752917663. ---------- 17-03-17 19:09:54.718 -07 000000610 INF: Cycle 22 Tile 2 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:54.718 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29129, sync = True, waitForSettling = True) 17-03-17 19:09:54.718 -07 000000610 INF: Z Motor: Moving to -0.133344 mm, started at -0.134168 mm, distance = 0.82 um 17-03-17 19:09:54.718 -07 000000610 INF: FPGA: Xmit ZDACW 29129\n [Z Motor] 17-03-17 19:09:54.718 -07 000000478 INF: FPGA: Recv ZDACW 17-03-17 19:09:54.728 -07 000000610 INF: FPGA: 'ZDACW 29129' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:09:54.728 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:54.728 -07 000000502 INF: FPGA: Recv ZDACR 29129 17-03-17 19:09:54.738 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.738 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:54.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.888 -07 000000478 INF: FPGA: Recv ZSGSRD 30046 17-03-17 19:09:54.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.898 -07 000000382 INF: FPGA: Recv ZSGSRD 30051 17-03-17 19:09:54.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.918 -07 000000478 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.019446, 17-03-17 19:09:54.918 -07 000000569 INF: FPGA: Recv ZSGSRD 30046 17-03-17 19:09:54.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:54.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.948 -07 000000478 INF: FPGA: Recv ZSGSRD 30041 17-03-17 19:09:54.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-17 19:09:54.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.958 -07 000000593 INF: FPGA: Recv ZSGSRD 30035 17-03-17 19:09:54.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:54.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.988 -07 000000476 INF: FPGA: Recv ZSGSRD 30041 17-03-17 19:09:54.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-17 19:09:54.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:54.998 -07 000000593 INF: FPGA: Recv ZSGSRD 30051 17-03-17 19:09:55.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:55.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:55.008 -07 000000502 INF: FPGA: Recv ZSGSRD 30050 17-03-17 19:09:55.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:55.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:55.018 -07 000000429 INF: FPGA: Recv ZSGSRD 30040 17-03-17 19:09:55.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:55.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:55.028 -07 000000502 INF: FPGA: Recv ZSGSRD 30043 17-03-17 19:09:55.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:55.038 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:55.038 -07 000000593 INF: FPGA: Recv ZPIEZORD 25637 17-03-17 19:09:55.048 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:55.048 -07 000000610 INF: Z Motor: Piezo is near 34.8 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.445 V. Piezo Error = -9.7 V. 17-03-17 19:09:55.048 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.3 um, Read 10 ADC samples: Avg = 30044 (-132.5 uncal um), Error = 0.8 uncal um, Median = 30044 (-132.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 30035 (-132.5 uncal um), Max = 30051 (-132.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-17 19:09:55.048 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30044, posNoise = 7, negNoise = 9 17-03-17 19:09:55.048 -07 000000610 INF: Z Motor: After move to -0.133344, error = 0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:55.048 -07 000000610 INF: Z Motor: MoveAbsStepped took 325 ms) 17-03-17 19:09:55.048 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:55.048 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:55.048 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:55.048 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:55.048 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:55.048 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:55.048 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:55.048 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:55.048 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:55.048 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:55.048 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:09:55.048 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:55.048 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:09:55.048 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:55.048 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:09:55.048 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:55.068 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-17 19:09:55.068 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-17 19:09:55.068 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:09:55.068 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-17 19:09:55.068 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 29306 150\n [Camera] 17-03-17 19:09:55.268 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:55.668 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:55.668 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:55.668 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:55.668 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:55.668 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:55.678 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:55.678 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:55.678 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2432929440, 0x0, 391868352) start. 17-03-17 19:09:55.678 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:55.678 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2468351704, 0x0, 418435064) start. 17-03-17 19:09:55.858 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29306 783 17-03-17 19:09:56.018 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936 17-03-17 19:09:56.068 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2432929440, 0x0, 391868352) end. Duration was 396 ms. 17-03-17 19:09:56.068 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-17 19:09:56.068 -07 000000382 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:56.078 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2468351704, 0x0, 418435064) end. Duration was 395 ms. 17-03-17 19:09:56.078 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-17 19:09:56.078 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:56.078 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:56.078 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-17 19:09:56.078 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:56.088 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms. 17-03-17 19:09:56.208 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:09:56.208 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:09:56.208 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:56.208 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:09:56.208 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:09:56.208 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:56.208 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:56.208 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start. 17-03-17 19:09:56.208 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:56.208 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start. 17-03-17 19:09:56.398 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:09:56.398 -07 000000502 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:09:56.398 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 29306 150' command took 2 ms to send, 1312 ms to get response, and 1324 ms overall 17-03-17 19:09:56.398 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-17 19:09:56.398 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.73388671875, Z-Position -0.133332381598201. ------ 17-03-17 19:09:56.398 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.14006 mm 17-03-17 19:09:56.398 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:09:56.398 -07 000000382 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:09:56.408 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True) 17-03-17 19:09:56.408 -07 000000462 INF: Y Motor: Moving to 61.5726 mm, started at 60.7339 mm, delta = 0.8387 mm 17-03-17 19:09:56.408 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:56.408 -07 000000593 INF: Z Motor: Entering MoveAbsStepped (DAC = 30595, sync = True, waitForSettling = False) 17-03-17 19:09:56.408 -07 000000593 INF: Z Motor: Moving to -0.140055 mm, started at -0.133332 mm, distance = -6.72 um 17-03-17 19:09:56.408 -07 000000476 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:09:56.408 -07 000000382 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-17 19:09:56.408 -07 000000618 INF: FPGA: Recv YRDPOS 124383 17-03-17 19:09:56.418 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:09:56.418 -07 000000462 INF: Y Motor: Encoder = 124383 = motor step 97174.2 = 60.7339 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:56.418 -07 000000462 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:09:56.418 -07 000000462 INF: Y Motor: Moving 1342 steps-19 17-03-17 19:09:56.418 -07 000000382 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:09:56.428 -07 000000593 INF: FPGA: Xmit ZDACW 30595\n [Z Motor] 17-03-17 19:09:56.428 -07 000000476 INF: FPGA: Recv ZDACW 17-03-17 19:09:56.438 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:09:56.438 -07 000000593 INF: FPGA: 'ZDACW 30595' command took 0 ms to send, 0 ms to get response, and 28 ms overall 17-03-17 19:09:56.448 -07 000000593 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:56.448 -07 000000618 INF: FPGA: Recv ZDACR 30595 17-03-17 19:09:56.458 -07 000000593 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:09:56.458 -07 000000593 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet)) 17-03-17 19:09:56.598 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 386 ms. 17-03-17 19:09:56.598 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms. 17-03-17 19:09:56.598 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:56.598 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 392 ms. 17-03-17 19:09:56.598 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-17 19:09:56.598 -07 000000627 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:56.598 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:56.608 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:09:56.608 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-17 19:09:56.608 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms. 17-03-17 19:09:56.618 -07 000000547 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:09:56.618 -07 000000382 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 210 ms overall 17-03-17 19:09:56.658 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:09:56.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:09:56.808 -07 000000627 INF: FPGA: Recv YMVTILE 17-03-17 19:09:56.808 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 399 ms overall 17-03-17 19:09:56.848 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:56.848 -07 000000618 INF: FPGA: Recv YRDPOS 126084 17-03-17 19:09:56.858 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:09:56.858 -07 000000462 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:56.858 -07 000000462 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm) 17-03-17 19:09:56.858 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.839 mm, average velocity = 2.102 mm/sec 17-03-17 19:09:57.808 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:09:57.808 -07 000000547 INF: FPGA: Recv YRDPOS 126084 17-03-17 19:09:57.818 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:57.818 -07 000000462 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:09:57.838 -07 000000462 INF: Y Motor: After move to 61.572609, error = -0.008156, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:09:57.838 -07 000000462 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:09:57.838 -07 000000462 INF: Y Motor: Moved to 61.5645 after 1430 ms (table move) 17-03-17 19:09:57.838 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.140055 mm (DAC = 30595) 17-03-17 19:09:57.838 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:57.838 -07 000000462 INF: FPGA: Recv ZSGSRD 31088 17-03-17 19:09:57.848 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:09:57.848 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:57.848 -07 000000593 INF: FPGA: Recv ZSGSRD 31082 17-03-17 19:09:57.858 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:57.858 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:57.858 -07 000000462 INF: FPGA: Recv ZSGSRD 31088 17-03-17 19:09:57.868 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:57.868 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:57.868 -07 000000547 INF: FPGA: Recv ZSGSRD 31098 17-03-17 19:09:57.878 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:57.878 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:57.878 -07 000000547 INF: FPGA: Recv ZSGSRD 31100 17-03-17 19:09:57.888 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:57.888 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:57.888 -07 000000462 INF: FPGA: Recv ZSGSRD 31101 17-03-17 19:09:57.898 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:57.898 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:57.898 -07 000000462 INF: FPGA: Recv ZSGSRD 31092 17-03-17 19:09:57.908 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:57.908 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:57.908 -07 000000462 INF: FPGA: Recv ZSGSRD 31088 17-03-17 19:09:57.918 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:57.918 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:57.918 -07 000000476 INF: FPGA: Recv ZSGSRD 31085 17-03-17 19:09:57.928 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:57.928 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:57.928 -07 000000382 INF: FPGA: Recv ZSGSRD 31085 17-03-17 19:09:57.938 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:57.938 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:57.938 -07 000000382 INF: FPGA: Recv ZPIEZORD 27006 17-03-17 19:09:57.948 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:57.948 -07 000000502 INF: Z Motor: Piezo is near 37.7 V (nominally 0 to 100 V), expect near 46.7 V, since DAC is at 4.668 V. Piezo Error = -9.0 V. 17-03-17 19:09:57.948 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -140.1 um, Read 10 ADC samples: Avg = 31091 (-139.3 uncal um), Error = 0.8 uncal um, Median = 31088 (-139.2 uncal um), StdDev = 7 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 31082 (-139.2 uncal um), Max = 31101 (-139.3 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-17 19:09:57.948 -07 000000502 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31091, posNoise = 10, negNoise = 9 17-03-17 19:09:57.948 -07 000000502 INF: Z Motor: After move to -0.140055, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:57.948 -07 000000502 INF: Z Motor: Settle wait time = 1433 ms, measure time = 106 ms (allowed 150 ms), total time = 1539 ms 17-03-17 19:09:57.948 -07 000000502 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-17 19:09:57.998 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1591 ms 17-03-17 19:09:57.998 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:09:57.998 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:57.998 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:57.998 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:57.998 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:57.998 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:09:57.998 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:57.998 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:57.998 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:09:58.008 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-17 19:09:58.008 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:09:58.018 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-17 19:09:58.018 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms. 17-03-17 19:09:58.018 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:09:58.068 -07 000000502 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:09:58.268 -07 000000429 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:09:58.268 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:09:58.268 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:09:58.268 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2503905096, 0x0, 559484976) start. 17-03-17 19:09:58.308 -07 000000561 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:09:58.308 -07 000000547 INF: FPGA: Recv CAMSNAP 17-03-17 19:09:58.308 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 284 ms overall 17-03-17 19:09:58.398 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2503905096, 0x0, 559484976) end. Duration was 127 ms. 17-03-17 19:09:58.398 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:58.398 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-17 19:09:58.398 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-17 19:09:58.408 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:09:58.408 -07 000000462 INF: Autofocus start 17-03-17 19:09:58.408 -07 000000462 INF: MeasureProfile start 17-03-17 19:09:58.418 -07 000000627 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:09:58.418 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:09:58.418 -07 000000569 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:09:58.418 -07 000000462 INF: MeasureProfile done 17-03-17 19:09:58.418 -07 000000462 INF: X=0 Z correction [um]=-0.02394831 17-03-17 19:09:58.418 -07 000000462 INF: Autofocus finished 17-03-17 19:09:58.618 -07 000000561 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:09:58.618 -07 000000569 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 202 ms overall 17-03-17 19:09:58.618 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.564453125, Z-position -0.140058531710625. ---------- 17-03-17 19:09:58.628 -07 000000610 INF: Cycle 22 Tile 3 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:09:58.628 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29102, sync = True, waitForSettling = True) 17-03-17 19:09:58.628 -07 000000610 INF: Z Motor: Moving to -0.133220 mm, started at -0.140059 mm, distance = 6.84 um 17-03-17 19:09:58.628 -07 000000610 INF: FPGA: Xmit ZDACW 29102\n [Z Motor] 17-03-17 19:09:58.628 -07 000000627 INF: FPGA: Recv ZDACW 17-03-17 19:09:58.638 -07 000000610 INF: FPGA: 'ZDACW 29102' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:09:58.638 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:09:58.638 -07 000000547 INF: FPGA: Recv ZDACR 29102 17-03-17 19:09:58.648 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:58.648 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:09:58.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:58.798 -07 000000547 INF: FPGA: Recv ZSGSRD 30024 17-03-17 19:09:58.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:09:58.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:58.808 -07 000000569 INF: FPGA: Recv ZSGSRD 30037 17-03-17 19:09:58.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 2 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:58.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:58.818 -07 000000627 INF: FPGA: Recv ZSGSRD 30027 17-03-17 19:09:58.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:58.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:58.828 -07 000000462 INF: FPGA: Recv ZSGSRD 30026 17-03-17 19:09:58.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:58.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:58.838 -07 000000478 INF: FPGA: Recv ZSGSRD 30027 17-03-17 19:09:58.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:58.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:58.848 -07 000000462 INF: FPGA: Recv ZSGSRD 30031 17-03-17 19:09:58.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:58.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:58.858 -07 000000547 INF: FPGA: Recv ZSGSRD 30023 17-03-17 19:09:58.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:58.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:58.868 -07 000000462 INF: FPGA: Recv ZSGSRD 30025 17-03-17 19:09:58.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:58.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:58.878 -07 000000547 INF: FPGA: Recv ZSGSRD 30028 17-03-17 19:09:58.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:58.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:09:58.888 -07 000000627 INF: FPGA: Recv ZSGSRD 30033 17-03-17 19:09:58.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:58.898 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:09:58.898 -07 000000547 INF: FPGA: Recv ZPIEZORD 25647 17-03-17 19:09:58.908 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:09:58.908 -07 000000610 INF: Z Motor: Piezo is near 34.8 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.441 V. Piezo Error = -9.6 V. 17-03-17 19:09:58.908 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.2 um, Read 10 ADC samples: Avg = 30028 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30027 (-132.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30023 (-132.4 uncal um), Max = 30037 (-132.5 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:09:58.908 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30028, posNoise = 9, negNoise = 5 17-03-17 19:09:58.908 -07 000000610 INF: Z Motor: After move to -0.133220, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:09:58.908 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms) 17-03-17 19:09:58.908 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:09:58.908 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:09:58.918 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:09:58.918 -07 000000478 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:09:58.918 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:09:58.918 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:09:58.918 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:09:58.918 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:09:58.918 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:09:58.918 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:09:58.918 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:09:58.918 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:09:58.928 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-17 19:09:58.928 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:09:58.928 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:09:58.928 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:09:58.938 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms. 17-03-17 19:09:58.938 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms. 17-03-17 19:09:58.938 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-17 19:09:58.938 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:09:58.938 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 29279 150\n [Camera] 17-03-17 19:09:59.138 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:09:59.538 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:09:59.538 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:09:59.538 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:09:59.538 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:09:59.538 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-17 19:09:59.548 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:09:59.548 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:09:59.548 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:09:59.548 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:09:59.548 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) start. 17-03-17 19:09:59.738 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29279 783 17-03-17 19:09:59.878 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:09:59.928 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 389 ms. 17-03-17 19:09:59.928 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-17 19:09:59.928 -07 000000478 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:59.928 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) end. Duration was 388 ms. 17-03-17 19:09:59.938 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-17 19:09:59.938 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:09:59.938 -07 000000478 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:09:59.938 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-17 19:09:59.938 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:09:59.948 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-17 19:10:00.078 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:00.078 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:00.078 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:00.078 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:00.078 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start. 17-03-17 19:10:00.078 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:00.078 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:00.078 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:00.078 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:00.078 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start. 17-03-17 19:10:00.268 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:10:00.268 -07 000000478 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:00.268 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 29279 150' command took 2 ms to send, 1315 ms to get response, and 1325 ms overall 17-03-17 19:10:00.268 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.133612 17-03-17 19:10:00.268 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13361 mm 17-03-17 19:10:00.268 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:00.268 -07 000000476 INF: Z Motor: Entering MoveAbsStepped (DAC = 29188, sync = True, waitForSettling = False) 17-03-17 19:10:00.268 -07 000000476 INF: Z Motor: Moving to -0.133614 mm, started at -0.133230 mm, distance = -0.38 um 17-03-17 19:10:00.268 -07 000000476 INF: FPGA: Xmit ZDACW 29188\n [Z Motor] 17-03-17 19:10:00.268 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True) 17-03-17 19:10:00.268 -07 000000424 INF: Y Motor: Moving to 62.4026 mm, started at 61.5645 mm, delta = 0.8382 mm 17-03-17 19:10:00.278 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:00.278 -07 000000478 INF: FPGA: Recv ZDACW 17-03-17 19:10:00.278 -07 000000476 INF: FPGA: 'ZDACW 29188' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-17 19:10:00.278 -07 000000561 INF: FPGA: Recv YRDPOS 126085 17-03-17 19:10:00.288 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:00.288 -07 000000424 INF: Y Motor: Encoder = 126085 = motor step 98503.9 = 61.5649 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:00.288 -07 000000476 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:00.288 -07 000000424 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:00.288 -07 000000462 INF: FPGA: Recv ZDACR 29188 17-03-17 19:10:00.288 -07 000000424 INF: Y Motor: Moving 1340 steps-17 17-03-17 19:10:00.298 -07 000000476 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 18 ms overall 17-03-17 19:10:00.298 -07 000000476 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet)) 17-03-17 19:10:00.308 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:00.308 -07 000000593 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.018051, 17-03-17 19:10:00.458 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 380 ms. 17-03-17 19:10:00.458 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-17 19:10:00.458 -07 000000547 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:00.458 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 380 ms. 17-03-17 19:10:00.458 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-17 19:10:00.458 -07 000000627 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:00.458 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:00.468 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-17 19:10:00.468 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-17 19:10:00.468 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-17 19:10:00.678 -07 000000476 INF: FPGA: Recv YMVTILE 17-03-17 19:10:00.678 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall 17-03-17 19:10:00.718 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:00.718 -07 000000593 INF: FPGA: Recv YRDPOS 127787 17-03-17 19:10:00.728 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:00.728 -07 000000424 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:00.728 -07 000000424 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm) 17-03-17 19:10:00.728 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.838 mm, average velocity = 2.122 mm/sec 17-03-17 19:10:01.658 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:01.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:01.678 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:01.678 -07 000000561 INF: FPGA: Recv YRDPOS 127787 17-03-17 19:10:01.688 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:01.688 -07 000000424 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:01.698 -07 000000424 INF: Y Motor: After move to 62.402607, error = -0.006611, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:01.708 -07 000000424 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:01.708 -07 000000424 INF: Y Motor: Moved to 62.3960 after 1430 ms (table move) 17-03-17 19:10:01.708 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133614 mm (DAC = 29188) 17-03-17 19:10:01.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:01.708 -07 000000593 INF: FPGA: Recv ZSGSRD 30098 17-03-17 19:10:01.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:10:01.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:01.718 -07 000000478 INF: FPGA: Recv ZSGSRD 30085 17-03-17 19:10:01.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:01.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:01.728 -07 000000593 INF: FPGA: Recv ZSGSRD 30090 17-03-17 19:10:01.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:01.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:01.738 -07 000000482 INF: FPGA: Recv ZSGSRD 30091 17-03-17 19:10:01.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:01.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:01.748 -07 000000424 INF: FPGA: Recv ZSGSRD 30091 17-03-17 19:10:01.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:01.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:01.758 -07 000000482 INF: FPGA: Recv ZSGSRD 30085 17-03-17 19:10:01.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:01.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:01.768 -07 000000424 INF: FPGA: Recv ZSGSRD 30086 17-03-17 19:10:01.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:01.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:01.778 -07 000000482 INF: FPGA: Recv ZSGSRD 30073 17-03-17 19:10:01.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:01.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:01.788 -07 000000424 INF: FPGA: Recv ZSGSRD 30089 17-03-17 19:10:01.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:01.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:01.798 -07 000000478 INF: FPGA: Recv ZSGSRD 30099 17-03-17 19:10:01.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:01.808 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:01.808 -07 000000448 INF: FPGA: Recv ZPIEZORD 25791 17-03-17 19:10:01.818 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:01.818 -07 000000610 INF: Z Motor: Piezo is near 35.1 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.454 V. Piezo Error = -9.4 V. 17-03-17 19:10:01.818 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.6 um, Read 10 ADC samples: Avg = 30089 (-132.8 uncal um), Error = 0.8 uncal um, Median = 30090 (-132.8 uncal um), StdDev = 7 (0.0 uncal um), Range = 26 (0.2 uncal um), Min = 30073 (-132.7 uncal um), Max = 30099 (-132.9 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 16 (0.1 uncal um) 17-03-17 19:10:01.818 -07 000000610 INF: Z Motor: ADC noise = 16, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30089, posNoise = 10, negNoise = 16 17-03-17 19:10:01.818 -07 000000610 INF: Z Motor: After move to -0.133614, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:01.818 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 108 ms (allowed 150 ms), total time = 1541 ms 17-03-17 19:10:01.818 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:01.868 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms 17-03-17 19:10:01.868 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:01.868 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39599609375, Z-position -0.13362147114458. ---------- 17-03-17 19:10:01.868 -07 000000610 INF: Cycle 22 Tile 4 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:01.868 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29011, sync = True, waitForSettling = True) 17-03-17 19:10:01.868 -07 000000610 INF: Z Motor: Moving to -0.132804 mm, started at -0.133621 mm, distance = 0.82 um 17-03-17 19:10:01.868 -07 000000610 INF: FPGA: Xmit ZDACW 29011\n [Z Motor] 17-03-17 19:10:01.868 -07 000000424 INF: FPGA: Recv ZDACW 17-03-17 19:10:01.878 -07 000000610 INF: FPGA: 'ZDACW 29011' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:10:01.878 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:01.878 -07 000000547 INF: FPGA: Recv ZDACR 29011 17-03-17 19:10:01.888 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:01.888 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:02.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:02.038 -07 000000448 INF: FPGA: Recv ZSGSRD 29974 17-03-17 19:10:02.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:02.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:02.048 -07 000000547 INF: FPGA: Recv ZSGSRD 29962 17-03-17 19:10:02.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:02.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:02.058 -07 000000448 INF: FPGA: Recv ZSGSRD 29964 17-03-17 19:10:02.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:02.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:02.068 -07 000000424 INF: FPGA: Recv ZSGSRD 29959 17-03-17 19:10:02.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:02.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:02.078 -07 000000593 INF: FPGA: Recv ZSGSRD 29965 17-03-17 19:10:02.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:02.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:02.088 -07 000000547 INF: FPGA: Recv ZSGSRD 29963 17-03-17 19:10:02.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:02.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:02.098 -07 000000476 INF: FPGA: Recv ZSGSRD 29964 17-03-17 19:10:02.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:02.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:02.108 -07 000000424 INF: FPGA: Recv ZSGSRD 29963 17-03-17 19:10:02.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:02.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:02.118 -07 000000476 INF: FPGA: Recv ZSGSRD 29969 17-03-17 19:10:02.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:02.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:02.128 -07 000000547 INF: FPGA: Recv ZSGSRD 29960 17-03-17 19:10:02.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:02.138 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:02.138 -07 000000476 INF: FPGA: Recv ZPIEZORD 25596 17-03-17 19:10:02.148 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:02.148 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.427 V. Piezo Error = -9.6 V. 17-03-17 19:10:02.148 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.8 um, Read 10 ADC samples: Avg = 29964 (-132.0 uncal um), Error = 0.8 uncal um, Median = 29964 (-132.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29959 (-132.0 uncal um), Max = 29974 (-132.1 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:10:02.148 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29964, posNoise = 10, negNoise = 5 17-03-17 19:10:02.148 -07 000000610 INF: Z Motor: After move to -0.132804, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:02.148 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-17 19:10:02.148 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:02.148 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:02.148 -07 000000448 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:02.148 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:02.148 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:02.148 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:02.148 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:02.148 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:02.148 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-17 19:10:02.148 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:02.148 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-17 19:10:02.148 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:02.148 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:10:02.148 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:02.158 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-17 19:10:02.158 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:02.158 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-17 19:10:02.158 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-17 19:10:02.168 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-17 19:10:02.168 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms. 17-03-17 19:10:02.168 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 29188 150\n [Camera] 17-03-17 19:10:02.368 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:02.768 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:02.768 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:02.768 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:02.768 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:02.768 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1064702000, 0x0, 391868352) start. 17-03-17 19:10:02.768 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:02.768 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:02.768 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:02.768 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:02.768 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1100124264, 0x0, 418435064) start. 17-03-17 19:10:02.958 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29188 783 17-03-17 19:10:03.108 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:03.148 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1100124264, 0x0, 418435064) end. Duration was 375 ms. 17-03-17 19:10:03.148 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-17 19:10:03.148 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:03.148 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:03.148 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1064702000, 0x0, 391868352) end. Duration was 383 ms. 17-03-17 19:10:03.148 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-17 19:10:03.148 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:03.148 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:03.148 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-17 19:10:03.158 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-17 19:10:03.298 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:03.298 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:03.298 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:03.298 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:03.298 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1135546528, 0x0, 391868352) start. 17-03-17 19:10:03.298 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:03.298 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:03.298 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:03.298 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:03.298 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start. 17-03-17 19:10:03.488 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:10:03.488 -07 000000547 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:03.488 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 29188 150' command took 2 ms to send, 1316 ms to get response, and 1323 ms overall 17-03-17 19:10:03.488 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.133553 17-03-17 19:10:03.488 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13355 mm 17-03-17 19:10:03.488 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:03.498 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 29175, sync = True, waitForSettling = False) 17-03-17 19:10:03.498 -07 000000547 INF: Z Motor: Moving to -0.133555 mm, started at -0.132818 mm, distance = -0.74 um 17-03-17 19:10:03.498 -07 000000547 INF: FPGA: Xmit ZDACW 29175\n [Z Motor] 17-03-17 19:10:03.498 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True) 17-03-17 19:10:03.498 -07 000000424 INF: Y Motor: Moving to 63.2326 mm, started at 62.3960 mm, delta = 0.8366 mm 17-03-17 19:10:03.498 -07 000000478 INF: FPGA: Recv ZDACW 17-03-17 19:10:03.508 -07 000000547 INF: FPGA: 'ZDACW 29175' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:10:03.508 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:03.508 -07 000000478 INF: FPGA: Recv YRDPOS 127787 17-03-17 19:10:03.518 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall 17-03-17 19:10:03.518 -07 000000424 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:03.518 -07 000000424 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:03.518 -07 000000424 INF: Y Motor: Moving 1339 steps-14 17-03-17 19:10:03.518 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:03.518 -07 000000478 INF: FPGA: Recv ZDACR 29175 17-03-17 19:10:03.528 -07 000000547 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:10:03.528 -07 000000547 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet)) 17-03-17 19:10:03.528 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:03.688 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1135546528, 0x0, 391868352) end. Duration was 388 ms. 17-03-17 19:10:03.688 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-17 19:10:03.688 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:03.688 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 387 ms. 17-03-17 19:10:03.688 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-17 19:10:03.688 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:03.688 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:03.688 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms. 17-03-17 19:10:03.698 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:03.698 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-17 19:10:03.898 -07 000000569 INF: FPGA: Recv YMVTILE 17-03-17 19:10:03.898 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall 17-03-17 19:10:03.938 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:03.938 -07 000000547 INF: FPGA: Recv YRDPOS 129485 17-03-17 19:10:03.948 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:10:03.948 -07 000000424 INF: Y Motor: Encoder = 129485 = motor step 101160.2 = 63.2251 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:03.948 -07 000000424 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm) 17-03-17 19:10:03.948 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.837 mm, average velocity = 2.156 mm/sec 17-03-17 19:10:04.898 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:04.898 -07 000000429 INF: FPGA: Recv YRDPOS 129485 17-03-17 19:10:04.908 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:04.908 -07 000000424 INF: Y Motor: Encoder = 129485 = motor step 101160.2 = 63.2251 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:04.928 -07 000000424 INF: Y Motor: After move to 63.232609, error = -0.007511, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:04.928 -07 000000424 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:04.928 -07 000000424 INF: Y Motor: Moved to 63.2251 after 1428 ms (table move) 17-03-17 19:10:04.928 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133555 mm (DAC = 29175) 17-03-17 19:10:04.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:04.928 -07 000000561 INF: FPGA: Recv ZSGSRD 30085 17-03-17 19:10:04.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:10:04.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:04.938 -07 000000547 INF: FPGA: Recv ZSGSRD 30074 17-03-17 19:10:04.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:04.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:04.948 -07 000000424 INF: FPGA: Recv ZSGSRD 30084 17-03-17 19:10:04.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:04.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:04.958 -07 000000569 INF: FPGA: Recv ZSGSRD 30086 17-03-17 19:10:04.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:04.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:04.968 -07 000000429 INF: FPGA: Recv ZSGSRD 30085 17-03-17 19:10:04.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:04.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:04.978 -07 000000424 INF: FPGA: Recv ZSGSRD 30079 17-03-17 19:10:04.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:04.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:04.988 -07 000000547 INF: FPGA: Recv ZSGSRD 30081 17-03-17 19:10:04.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:04.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:04.998 -07 000000478 INF: FPGA: Recv ZSGSRD 30078 17-03-17 19:10:05.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.008 -07 000000547 INF: FPGA: Recv ZSGSRD 30072 17-03-17 19:10:05.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.018 -07 000000478 INF: FPGA: Recv ZSGSRD 30078 17-03-17 19:10:05.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.028 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:05.028 -07 000000547 INF: FPGA: Recv ZPIEZORD 25782 17-03-17 19:10:05.038 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.038 -07 000000610 INF: Z Motor: Piezo is near 35.1 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.452 V. Piezo Error = -9.4 V. 17-03-17 19:10:05.038 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.6 um, Read 10 ADC samples: Avg = 30080 (-132.8 uncal um), Error = 0.8 uncal um, Median = 30080 (-132.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30072 (-132.7 uncal um), Max = 30086 (-132.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-17 19:10:05.038 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30080, posNoise = 6, negNoise = 8 17-03-17 19:10:05.038 -07 000000610 INF: Z Motor: After move to -0.133555, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:05.038 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 107 ms (allowed 150 ms), total time = 1538 ms 17-03-17 19:10:05.038 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:05.088 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1591 ms 17-03-17 19:10:05.088 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:05.088 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22509765625, Z-position -0.133563653235305. ---------- 17-03-17 19:10:05.088 -07 000000610 INF: Cycle 22 Tile 5 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:05.088 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28998, sync = True, waitForSettling = True) 17-03-17 19:10:05.088 -07 000000610 INF: Z Motor: Moving to -0.132744 mm, started at -0.133564 mm, distance = 0.82 um 17-03-17 19:10:05.088 -07 000000610 INF: FPGA: Xmit ZDACW 28998\n [Z Motor] 17-03-17 19:10:05.088 -07 000000569 INF: FPGA: Recv ZDACW 17-03-17 19:10:05.098 -07 000000610 INF: FPGA: 'ZDACW 28998' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:10:05.098 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:05.098 -07 000000478 INF: FPGA: Recv ZDACR 28998 17-03-17 19:10:05.108 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.108 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:05.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.258 -07 000000424 INF: FPGA: Recv ZSGSRD 29961 17-03-17 19:10:05.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.268 -07 000000429 INF: FPGA: Recv ZSGSRD 29953 17-03-17 19:10:05.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.278 -07 000000547 INF: FPGA: Recv ZSGSRD 29960 17-03-17 19:10:05.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.288 -07 000000429 INF: FPGA: Recv ZSGSRD 29952 17-03-17 19:10:05.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.298 -07 000000547 INF: FPGA: Recv ZSGSRD 29946 17-03-17 19:10:05.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.308 -07 000000429 INF: FPGA: Recv ZSGSRD 29954 17-03-17 19:10:05.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.318 -07 000000547 INF: FPGA: Recv ZSGSRD 29941 17-03-17 19:10:05.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.328 -07 000000429 INF: FPGA: Recv ZSGSRD 29957 17-03-17 19:10:05.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.338 -07 000000424 INF: FPGA: Recv ZSGSRD 29949 17-03-17 19:10:05.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:05.348 -07 000000429 INF: FPGA: Recv ZSGSRD 29959 17-03-17 19:10:05.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:05.368 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:05.368 -07 000000547 INF: FPGA: Recv ZPIEZORD 25604 17-03-17 19:10:05.378 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:10:05.378 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.425 V. Piezo Error = -9.6 V. 17-03-17 19:10:05.378 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29953 (-132.0 uncal um), Error = 0.8 uncal um, Median = 29954 (-132.0 uncal um), StdDev = 6 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 29941 (-131.9 uncal um), Max = 29961 (-132.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 12 (0.1 uncal um) 17-03-17 19:10:05.378 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29953, posNoise = 8, negNoise = 12 17-03-17 19:10:05.378 -07 000000610 INF: Z Motor: After move to -0.132744, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:05.378 -07 000000610 INF: Z Motor: MoveAbsStepped took 284 ms) 17-03-17 19:10:05.378 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:05.378 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:05.378 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:05.378 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:05.378 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:05.378 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:05.378 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:05.378 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:05.378 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 3 ms. 17-03-17 19:10:05.378 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:05.378 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:05.378 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:05.388 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:10:05.388 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:05.388 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-17 19:10:05.388 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:05.398 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:10:05.398 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:10:05.398 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-17 19:10:05.398 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:10:05.398 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 29175 150\n [Camera] 17-03-17 19:10:05.598 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:05.678 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.011254, 17-03-17 19:10:05.998 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:05.998 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:05.998 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:05.998 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:05.998 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start. 17-03-17 19:10:06.008 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:06.008 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:06.008 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:06.128 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:06.128 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-17 19:10:06.198 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29175 783 17-03-17 19:10:06.338 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:06.388 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 383 ms. 17-03-17 19:10:06.388 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-17 19:10:06.388 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:06.388 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:06.388 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-17 19:10:06.498 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 370 ms. 17-03-17 19:10:06.498 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms. 17-03-17 19:10:06.498 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:06.498 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:06.508 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 504 ms. 17-03-17 19:10:06.538 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:06.538 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:06.538 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:06.538 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:06.538 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:06.538 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:06.548 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:06.548 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:10:06.548 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:06.548 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-17 19:10:06.668 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:06.668 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:06.728 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:10:06.728 -07 000000502 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:06.728 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 29175 150' command took 2 ms to send, 1313 ms to get response, and 1323 ms overall 17-03-17 19:10:06.728 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.133256 17-03-17 19:10:06.728 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13326 mm 17-03-17 19:10:06.728 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:06.728 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 29110, sync = True, waitForSettling = False) 17-03-17 19:10:06.728 -07 000000424 INF: Z Motor: Moving to -0.133257 mm, started at -0.132748 mm, distance = -0.51 um 17-03-17 19:10:06.728 -07 000000424 INF: FPGA: Xmit ZDACW 29110\n [Z Motor] 17-03-17 19:10:06.728 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True) 17-03-17 19:10:06.728 -07 000000429 INF: Y Motor: Moving to 64.0626 mm, started at 63.2251 mm, delta = 0.8375 mm 17-03-17 19:10:06.738 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:06.738 -07 000000547 INF: FPGA: Recv ZDACW 17-03-17 19:10:06.738 -07 000000424 INF: FPGA: 'ZDACW 29110' command took 0 ms to send, 4 ms to get response, and 5 ms overall 17-03-17 19:10:06.738 -07 000000502 INF: FPGA: Recv YRDPOS 129485 17-03-17 19:10:06.748 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:06.748 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:06.748 -07 000000429 INF: Y Motor: Encoder = 129485 = motor step 101160.2 = 63.2251 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:06.748 -07 000000429 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:06.748 -07 000000429 INF: Y Motor: Moving 1340 steps-15 17-03-17 19:10:06.748 -07 000000478 INF: FPGA: Recv ZDACR 29110 17-03-17 19:10:06.758 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-17 19:10:06.758 -07 000000424 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet)) 17-03-17 19:10:06.758 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:06.938 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 389 ms. 17-03-17 19:10:06.938 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 389 ms. 17-03-17 19:10:06.938 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-17 19:10:06.938 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:06.938 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-17 19:10:06.938 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:06.938 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:06.938 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-17 19:10:06.938 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:06.948 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms. 17-03-17 19:10:07.128 -07 000000502 INF: FPGA: Recv YMVTILE 17-03-17 19:10:07.128 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-17 19:10:07.178 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:07.188 -07 000000462 INF: FPGA: Recv YRDPOS 131190 17-03-17 19:10:07.188 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-17 19:10:07.188 -07 000000429 INF: Y Motor: Encoder = 131190 = motor step 102492.2 = 64.0576 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:07.188 -07 000000429 INF: Y Motor: Position error before settling (table move) = -10 encoder counts (-0.005 mm) 17-03-17 19:10:07.188 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.838 mm, average velocity = 2.159 mm/sec 17-03-17 19:10:08.138 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:08.138 -07 000000482 INF: FPGA: Recv YRDPOS 131190 17-03-17 19:10:08.148 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:08.148 -07 000000429 INF: Y Motor: Encoder = 131190 = motor step 102492.2 = 64.0576 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:08.158 -07 000000429 INF: Y Motor: After move to 64.062607, error = -0.004990, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:08.158 -07 000000429 INF: Y Motor: Position error after settling (table move) = -10 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:08.158 -07 000000429 INF: Y Motor: Moved to 64.0576 after 1427 ms (table move) 17-03-17 19:10:08.158 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133257 mm (DAC = 29110) 17-03-17 19:10:08.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.168 -07 000000547 INF: FPGA: Recv ZSGSRD 30035 17-03-17 19:10:08.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-17 19:10:08.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.168 -07 000000618 INF: FPGA: Recv ZSGSRD 30029 17-03-17 19:10:08.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:10:08.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.178 -07 000000593 INF: FPGA: Recv ZSGSRD 30040 17-03-17 19:10:08.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.188 -07 000000561 INF: FPGA: Recv ZSGSRD 30039 17-03-17 19:10:08.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.198 -07 000000482 INF: FPGA: Recv ZSGSRD 30037 17-03-17 19:10:08.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.208 -07 000000462 INF: FPGA: Recv ZSGSRD 30028 17-03-17 19:10:08.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.218 -07 000000424 INF: FPGA: Recv ZSGSRD 30030 17-03-17 19:10:08.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.228 -07 000000429 INF: FPGA: Recv ZSGSRD 30028 17-03-17 19:10:08.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.238 -07 000000462 INF: FPGA: Recv ZSGSRD 30030 17-03-17 19:10:08.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.248 -07 000000429 INF: FPGA: Recv ZSGSRD 30032 17-03-17 19:10:08.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.258 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:08.258 -07 000000462 INF: FPGA: Recv ZPIEZORD 25716 17-03-17 19:10:08.268 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.268 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.442 V. Piezo Error = -9.5 V. 17-03-17 19:10:08.268 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.3 um, Read 10 ADC samples: Avg = 30033 (-132.5 uncal um), Error = 0.8 uncal um, Median = 30031 (-132.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30028 (-132.4 uncal um), Max = 30040 (-132.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:10:08.268 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30033, posNoise = 7, negNoise = 5 17-03-17 19:10:08.268 -07 000000610 INF: Z Motor: After move to -0.133257, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:08.268 -07 000000610 INF: Z Motor: Settle wait time = 1429 ms, measure time = 102 ms (allowed 150 ms), total time = 1531 ms 17-03-17 19:10:08.268 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:08.318 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1584 ms 17-03-17 19:10:08.318 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:08.318 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.0576171875, Z-position -0.133261715264642. ---------- 17-03-17 19:10:08.318 -07 000000610 INF: Cycle 22 Tile 6 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:08.318 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28933, sync = True, waitForSettling = True) 17-03-17 19:10:08.318 -07 000000610 INF: Z Motor: Moving to -0.132447 mm, started at -0.133262 mm, distance = 0.81 um 17-03-17 19:10:08.318 -07 000000610 INF: FPGA: Xmit ZDACW 28933\n [Z Motor] 17-03-17 19:10:08.318 -07 000000424 INF: FPGA: Recv ZDACW 17-03-17 19:10:08.328 -07 000000610 INF: FPGA: 'ZDACW 28933' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:10:08.328 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:08.328 -07 000000569 INF: FPGA: Recv ZDACR 28933 17-03-17 19:10:08.338 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.338 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:08.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.488 -07 000000429 INF: FPGA: Recv ZSGSRD 29905 17-03-17 19:10:08.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:08.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.498 -07 000000424 INF: FPGA: Recv ZSGSRD 29912 17-03-17 19:10:08.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.508 -07 000000569 INF: FPGA: Recv ZSGSRD 29907 17-03-17 19:10:08.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.518 -07 000000462 INF: FPGA: Recv ZSGSRD 29902 17-03-17 19:10:08.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.528 -07 000000429 INF: FPGA: Recv ZSGSRD 29908 17-03-17 19:10:08.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.538 -07 000000623 INF: FPGA: Recv ZSGSRD 29905 17-03-17 19:10:08.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.548 -07 000000569 INF: FPGA: Recv ZSGSRD 29911 17-03-17 19:10:08.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.558 -07 000000623 INF: FPGA: Recv ZSGSRD 29910 17-03-17 19:10:08.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.568 -07 000000569 INF: FPGA: Recv ZSGSRD 29909 17-03-17 19:10:08.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:08.578 -07 000000623 INF: FPGA: Recv ZSGSRD 29911 17-03-17 19:10:08.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.588 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:08.588 -07 000000541 INF: FPGA: Recv ZPIEZORD 25566 17-03-17 19:10:08.598 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:08.598 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.415 V. Piezo Error = -9.5 V. 17-03-17 19:10:08.598 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29908 (-131.7 uncal um), Error = 0.8 uncal um, Median = 29908 (-131.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29902 (-131.6 uncal um), Max = 29912 (-131.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:10:08.598 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29908, posNoise = 4, negNoise = 6 17-03-17 19:10:08.598 -07 000000610 INF: Z Motor: After move to -0.132447, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:08.598 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-17 19:10:08.598 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:08.598 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:08.598 -07 000000623 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:08.598 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:08.598 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:08.598 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:08.598 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:08.598 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:08.598 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:08.598 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:08.598 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-17 19:10:08.598 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:08.608 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-17 19:10:08.608 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:08.608 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:10:08.608 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:08.618 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-17 19:10:08.618 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-17 19:10:08.618 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-17 19:10:08.618 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:10:08.618 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 29110 150\n [Camera] 17-03-17 19:10:08.818 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:09.218 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:09.218 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:09.218 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:09.228 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:09.228 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:09.228 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:09.338 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:09.338 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start. 17-03-17 19:10:09.338 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:09.338 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-17 19:10:09.418 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29110 783 17-03-17 19:10:09.568 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 935 17-03-17 19:10:09.728 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 389 ms. 17-03-17 19:10:09.728 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-17 19:10:09.728 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:09.728 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:09.728 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 506 ms. 17-03-17 19:10:09.728 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 390 ms. 17-03-17 19:10:09.728 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-17 19:10:09.728 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:09.738 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:09.738 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 515 ms. 17-03-17 19:10:09.758 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:09.758 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:09.758 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:09.758 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:09.758 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:09.758 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:09.758 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:09.758 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-17 19:10:09.758 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:09.758 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:10:09.948 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:10:09.948 -07 000000623 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:09.948 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 29110 150' command took 2 ms to send, 1312 ms to get response, and 1323 ms overall 17-03-17 19:10:09.948 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-17 19:10:09.948 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.0576171875, Z-Position -0.132458688746922. ------ 17-03-17 19:10:09.948 -07 000000476 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:10:09.948 -07 000000623 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13900 mm 17-03-17 19:10:09.948 -07 000000623 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:09.958 -07 000000448 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:10:09.958 -07 000000476 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:10:09.958 -07 000000476 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:10:09.958 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 30365, sync = True, waitForSettling = False) 17-03-17 19:10:09.958 -07 000000462 INF: Z Motor: Moving to -0.139002 mm, started at -0.132459 mm, distance = -6.54 um 17-03-17 19:10:09.958 -07 000000541 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True) 17-03-17 19:10:09.958 -07 000000541 INF: Y Motor: Moving to 64.8926 mm, started at 64.0576 mm, delta = 0.8350 mm 17-03-17 19:10:09.968 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:09.968 -07 000000502 INF: FPGA: Recv YRDPOS 131190 17-03-17 19:10:09.978 -07 000000462 INF: FPGA: Xmit ZDACW 30365\n [Z Motor] 17-03-17 19:10:09.978 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-17 19:10:09.978 -07 000000541 INF: Y Motor: Encoder = 131190 = motor step 102492.2 = 64.0576 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:09.978 -07 000000541 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:09.978 -07 000000541 INF: Y Motor: Moving 1336 steps-10 17-03-17 19:10:09.978 -07 000000382 INF: FPGA: Recv ZDACW 17-03-17 19:10:09.988 -07 000000462 INF: FPGA: 'ZDACW 30365' command took 0 ms to send, 0 ms to get response, and 26 ms overall 17-03-17 19:10:09.988 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:09.988 -07 000000448 INF: FPGA: Recv ZDACR 30365 17-03-17 19:10:09.998 -07 000000541 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:09.998 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:09.998 -07 000000462 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet)) 17-03-17 19:10:10.138 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms. 17-03-17 19:10:10.138 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-17 19:10:10.138 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:10.138 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 375 ms. 17-03-17 19:10:10.138 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-17 19:10:10.138 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:10.138 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:10.138 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-17 19:10:10.138 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:10.148 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-17 19:10:10.158 -07 000000462 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:10:10.158 -07 000000476 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 202 ms overall 17-03-17 19:10:10.368 -07 000000448 INF: FPGA: Recv YMVTILE 17-03-17 19:10:10.368 -07 000000541 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 398 ms overall 17-03-17 19:10:10.408 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:10.408 -07 000000547 INF: FPGA: Recv YRDPOS 132873 17-03-17 19:10:10.418 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:10:10.418 -07 000000541 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:10.418 -07 000000541 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm) 17-03-17 19:10:10.418 -07 000000541 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.835 mm, average velocity = 2.093 mm/sec 17-03-17 19:10:11.038 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.999021, 17-03-17 19:10:11.368 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:11.368 -07 000000462 INF: FPGA: Recv YRDPOS 132874 17-03-17 19:10:11.378 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:11.378 -07 000000541 INF: Y Motor: Encoder = 132874 = motor step 103807.8 = 64.8799 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:11.398 -07 000000541 INF: Y Motor: After move to 64.892609, error = -0.012726, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:11.398 -07 000000541 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 1 counts (0.000 mm) 17-03-17 19:10:11.398 -07 000000541 INF: Y Motor: Moved to 64.8799 after 1439 ms (table move) 17-03-17 19:10:11.398 -07 000000623 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139002 mm (DAC = 30365) 17-03-17 19:10:11.398 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:11.398 -07 000000476 INF: FPGA: Recv ZSGSRD 30927 17-03-17 19:10:11.408 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:10:11.408 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:11.408 -07 000000502 INF: FPGA: Recv ZSGSRD 30928 17-03-17 19:10:11.418 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:11.418 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:11.418 -07 000000448 INF: FPGA: Recv ZSGSRD 30912 17-03-17 19:10:11.428 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:11.428 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:11.428 -07 000000547 INF: FPGA: Recv ZSGSRD 30931 17-03-17 19:10:11.438 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:11.438 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:11.438 -07 000000618 INF: FPGA: Recv ZSGSRD 30938 17-03-17 19:10:11.448 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:11.448 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:11.448 -07 000000627 INF: FPGA: Recv ZSGSRD 30935 17-03-17 19:10:11.458 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:11.458 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:11.458 -07 000000382 INF: FPGA: Recv ZSGSRD 30927 17-03-17 19:10:11.468 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:11.468 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:11.468 -07 000000618 INF: FPGA: Recv ZSGSRD 30927 17-03-17 19:10:11.478 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:11.478 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:11.478 -07 000000382 INF: FPGA: Recv ZSGSRD 30918 17-03-17 19:10:11.488 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:11.488 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:11.488 -07 000000424 INF: FPGA: Recv ZSGSRD 30924 17-03-17 19:10:11.498 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:11.498 -07 000000623 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:11.498 -07 000000478 INF: FPGA: Recv ZPIEZORD 26915 17-03-17 19:10:11.508 -07 000000623 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:11.508 -07 000000623 INF: Z Motor: Piezo is near 37.5 V (nominally 0 to 100 V), expect near 46.3 V, since DAC is at 4.633 V. Piezo Error = -8.8 V. 17-03-17 19:10:11.508 -07 000000623 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.0 um, Read 10 ADC samples: Avg = 30927 (-138.2 uncal um), Error = 0.8 uncal um, Median = 30927 (-138.2 uncal um), StdDev = 8 (0.1 uncal um), Range = 26 (0.2 uncal um), Min = 30912 (-138.1 uncal um), Max = 30938 (-138.3 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 15 (0.1 uncal um) 17-03-17 19:10:11.508 -07 000000623 INF: Z Motor: ADC noise = 15, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30927, posNoise = 11, negNoise = 15 17-03-17 19:10:11.508 -07 000000623 INF: Z Motor: After move to -0.139002, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:11.508 -07 000000623 INF: Z Motor: Settle wait time = 1442 ms, measure time = 104 ms (allowed 150 ms), total time = 1546 ms 17-03-17 19:10:11.508 -07 000000623 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:11.558 -07 000000623 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms 17-03-17 19:10:11.558 -07 000000623 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:11.558 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:11.558 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:11.558 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:11.558 -07 000000478 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:10:11.558 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:11.558 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:11.558 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:11.558 -07 000000478 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:10:11.568 -07 000000478 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-17 19:10:11.568 -07 000000478 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:10:11.578 -07 000000478 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-17 19:10:11.578 -07 000000478 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms. 17-03-17 19:10:11.578 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:10:11.628 -07 000000462 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:10:11.658 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:11.668 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:11.828 -07 000000623 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:10:11.828 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:10:11.828 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:10:11.828 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) start. 17-03-17 19:10:11.868 -07 000000541 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:10:11.868 -07 000000382 INF: FPGA: Recv CAMSNAP 17-03-17 19:10:11.868 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 284 ms to get response, and 287 ms overall 17-03-17 19:10:11.958 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) end. Duration was 126 ms. 17-03-17 19:10:11.958 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:11.958 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-17 19:10:11.958 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-17 19:10:11.968 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:10:11.968 -07 000000561 INF: Autofocus start 17-03-17 19:10:11.968 -07 000000561 INF: MeasureProfile start 17-03-17 19:10:11.968 -07 000000623 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:10:11.978 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:10:11.978 -07 000000547 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:10:11.978 -07 000000561 INF: MeasureProfile done 17-03-17 19:10:11.978 -07 000000561 INF: X=0 Z correction [um]=-0.02394831 17-03-17 19:10:11.978 -07 000000561 INF: Autofocus finished 17-03-17 19:10:12.178 -07 000000476 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:10:12.178 -07 000000547 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-17 19:10:12.178 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.8798828125, Z-position -0.139004960919376. ---------- 17-03-17 19:10:12.178 -07 000000610 INF: Cycle 22 Tile 7 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:12.188 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28872, sync = True, waitForSettling = True) 17-03-17 19:10:12.188 -07 000000610 INF: Z Motor: Moving to -0.132168 mm, started at -0.139005 mm, distance = 6.84 um 17-03-17 19:10:12.188 -07 000000610 INF: FPGA: Xmit ZDACW 28872\n [Z Motor] 17-03-17 19:10:12.188 -07 000000618 INF: FPGA: Recv ZDACW 17-03-17 19:10:12.198 -07 000000610 INF: FPGA: 'ZDACW 28872' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:10:12.198 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:12.198 -07 000000382 INF: FPGA: Recv ZDACR 28872 17-03-17 19:10:12.208 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:12.208 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:12.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:12.358 -07 000000547 INF: FPGA: Recv ZSGSRD 29868 17-03-17 19:10:12.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:12.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:12.368 -07 000000541 INF: FPGA: Recv ZSGSRD 29857 17-03-17 19:10:12.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:12.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:12.378 -07 000000561 INF: FPGA: Recv ZSGSRD 29869 17-03-17 19:10:12.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:12.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:12.388 -07 000000382 INF: FPGA: Recv ZSGSRD 29862 17-03-17 19:10:12.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:12.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:12.398 -07 000000569 INF: FPGA: Recv ZSGSRD 29865 17-03-17 19:10:12.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:12.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:12.408 -07 000000627 INF: FPGA: Recv ZSGSRD 29863 17-03-17 19:10:12.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:12.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:12.418 -07 000000502 INF: FPGA: Recv ZSGSRD 29864 17-03-17 19:10:12.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:12.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:12.428 -07 000000382 INF: FPGA: Recv ZSGSRD 29870 17-03-17 19:10:12.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:12.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:12.438 -07 000000569 INF: FPGA: Recv ZSGSRD 29863 17-03-17 19:10:12.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:12.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:12.448 -07 000000627 INF: FPGA: Recv ZSGSRD 29866 17-03-17 19:10:12.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:12.458 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:12.458 -07 000000541 INF: FPGA: Recv ZPIEZORD 25531 17-03-17 19:10:12.468 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:12.468 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.406 V. Piezo Error = -9.5 V. 17-03-17 19:10:12.468 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29865 (-131.4 uncal um), Error = 0.8 uncal um, Median = 29864 (-131.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29857 (-131.3 uncal um), Max = 29870 (-131.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-17 19:10:12.468 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29865, posNoise = 5, negNoise = 8 17-03-17 19:10:12.468 -07 000000610 INF: Z Motor: After move to -0.132168, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:12.468 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-17 19:10:12.468 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:12.468 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:12.468 -07 000000541 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:12.468 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:12.468 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:12.468 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:12.468 -07 000000478 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:12.468 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:12.468 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:12.468 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:12.468 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:12.468 -07 000000478 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:12.478 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:10:12.478 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:12.478 -07 000000478 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:10:12.478 -07 000000478 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:12.488 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-17 19:10:12.488 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:10:12.488 -07 000000478 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:10:12.488 -07 000000478 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:10:12.498 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 29049 150\n [Camera] 17-03-17 19:10:12.688 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:13.088 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:13.088 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:13.088 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:13.098 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:13.098 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:13.098 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:13.098 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:13.098 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start. 17-03-17 19:10:13.098 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:13.098 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-17 19:10:13.288 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29049 783 17-03-17 19:10:13.438 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:13.468 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 372 ms. 17-03-17 19:10:13.468 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-17 19:10:13.468 -07 000000541 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:13.468 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 369 ms. 17-03-17 19:10:13.468 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms. 17-03-17 19:10:13.468 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:13.478 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:13.478 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-17 19:10:13.478 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:13.488 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-17 19:10:13.628 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:13.628 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:13.628 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:13.628 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:13.628 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:13.628 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:13.628 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:13.628 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start. 17-03-17 19:10:13.638 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:13.638 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start. 17-03-17 19:10:13.818 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1318 17-03-17 19:10:13.818 -07 000000502 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:13.818 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 29049 150' command took 2 ms to send, 1315 ms to get response, and 1325 ms overall 17-03-17 19:10:13.818 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.132782 17-03-17 19:10:13.818 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13278 mm 17-03-17 19:10:13.818 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:13.828 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 29006, sync = True, waitForSettling = False) 17-03-17 19:10:13.828 -07 000000561 INF: Z Motor: Moving to -0.132781 mm, started at -0.132182 mm, distance = -0.60 um 17-03-17 19:10:13.828 -07 000000561 INF: FPGA: Xmit ZDACW 29006\n [Z Motor] 17-03-17 19:10:13.828 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True) 17-03-17 19:10:13.828 -07 000000502 INF: Y Motor: Moving to 65.7226 mm, started at 64.8799 mm, delta = 0.8427 mm 17-03-17 19:10:13.838 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:14.008 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 378 ms. 17-03-17 19:10:14.008 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms. 17-03-17 19:10:14.008 -07 000000627 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:14.008 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 375 ms. 17-03-17 19:10:14.008 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-17 19:10:14.008 -07 000000541 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:14.018 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:14.018 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-17 19:10:14.018 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-17 19:10:14.028 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-17 19:10:14.028 -07 000000627 INF: FPGA: Recv ZDACW 17-03-17 19:10:14.028 -07 000000627 INF: FPGA: Recv YRDPOS 132874 17-03-17 19:10:14.028 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 186 ms to get response, and 201 ms overall 17-03-17 19:10:14.028 -07 000000502 INF: Y Motor: Encoder = 132874 = motor step 103807.8 = 64.8799 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:14.028 -07 000000502 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:14.028 -07 000000502 INF: Y Motor: Moving 1348 steps-27 17-03-17 19:10:14.028 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:14.028 -07 000000561 INF: FPGA: 'ZDACW 29006' command took 0 ms to send, 195 ms to get response, and 202 ms overall 17-03-17 19:10:14.038 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:14.038 -07 000000541 INF: FPGA: Recv ZDACR 29006 17-03-17 19:10:14.048 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-17 19:10:14.048 -07 000000561 INF: Z Motor: MoveAbsStepped took 217 ms (did NOT wait for settling yet)) 17-03-17 19:10:14.408 -07 000000482 INF: FPGA: Recv YMVTILE 17-03-17 19:10:14.408 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 375 ms to get response, and 378 ms overall 17-03-17 19:10:14.448 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:14.448 -07 000000627 INF: FPGA: Recv YRDPOS 134584 17-03-17 19:10:14.458 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:14.458 -07 000000502 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:14.458 -07 000000502 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm) 17-03-17 19:10:14.458 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.843 mm, average velocity = 2.229 mm/sec 17-03-17 19:10:15.408 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:15.408 -07 000000561 INF: FPGA: Recv YRDPOS 134584 17-03-17 19:10:15.418 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.418 -07 000000502 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:15.438 -07 000000502 INF: Y Motor: After move to 65.722610, error = -0.007767, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:15.438 -07 000000502 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:15.438 -07 000000502 INF: Y Motor: Moved to 65.7148 after 1607 ms (table move) 17-03-17 19:10:15.438 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132781 mm (DAC = 29006) 17-03-17 19:10:15.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.438 -07 000000502 INF: FPGA: Recv ZSGSRD 29956 17-03-17 19:10:15.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:10:15.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.448 -07 000000502 INF: FPGA: Recv ZSGSRD 29963 17-03-17 19:10:15.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.458 -07 000000502 INF: FPGA: Recv ZSGSRD 29959 17-03-17 19:10:15.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.468 -07 000000429 INF: FPGA: Recv ZSGSRD 29952 17-03-17 19:10:15.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.478 -07 000000429 INF: FPGA: Recv ZSGSRD 29954 17-03-17 19:10:15.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.488 -07 000000429 INF: FPGA: Recv ZSGSRD 29958 17-03-17 19:10:15.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.498 -07 000000561 INF: FPGA: Recv ZSGSRD 29957 17-03-17 19:10:15.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.508 -07 000000561 INF: FPGA: Recv ZSGSRD 29961 17-03-17 19:10:15.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.518 -07 000000429 INF: FPGA: Recv ZSGSRD 29955 17-03-17 19:10:15.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.528 -07 000000561 INF: FPGA: Recv ZSGSRD 29968 17-03-17 19:10:15.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.538 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:15.538 -07 000000429 INF: FPGA: Recv ZPIEZORD 25695 17-03-17 19:10:15.548 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.548 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.426 V. Piezo Error = -9.4 V. 17-03-17 19:10:15.548 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.8 um, Read 10 ADC samples: Avg = 29958 (-132.0 uncal um), Error = 0.8 uncal um, Median = 29958 (-132.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29952 (-132.0 uncal um), Max = 29968 (-132.1 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:10:15.548 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29958, posNoise = 10, negNoise = 6 17-03-17 19:10:15.548 -07 000000610 INF: Z Motor: After move to -0.132781, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:15.548 -07 000000610 INF: Z Motor: Settle wait time = 1610 ms, measure time = 107 ms (allowed 150 ms), total time = 1717 ms 17-03-17 19:10:15.548 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:15.598 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1771 ms 17-03-17 19:10:15.598 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:15.598 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71484375, Z-position -0.13277989935401. ---------- 17-03-17 19:10:15.598 -07 000000610 INF: Cycle 22 Tile 8 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:15.598 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28830, sync = True, waitForSettling = True) 17-03-17 19:10:15.598 -07 000000610 INF: Z Motor: Moving to -0.131975 mm, started at -0.132780 mm, distance = 0.80 um 17-03-17 19:10:15.598 -07 000000610 INF: FPGA: Xmit ZDACW 28830\n [Z Motor] 17-03-17 19:10:15.598 -07 000000593 INF: FPGA: Recv ZDACW 17-03-17 19:10:15.608 -07 000000610 INF: FPGA: 'ZDACW 28830' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:10:15.608 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:15.608 -07 000000627 INF: FPGA: Recv ZDACR 28830 17-03-17 19:10:15.618 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.618 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:15.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.768 -07 000000627 INF: FPGA: Recv ZSGSRD 29837 17-03-17 19:10:15.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:15.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.778 -07 000000593 INF: FPGA: Recv ZSGSRD 29831 17-03-17 19:10:15.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.788 -07 000000593 INF: FPGA: Recv ZSGSRD 29829 17-03-17 19:10:15.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.798 -07 000000382 INF: FPGA: Recv ZSGSRD 29829 17-03-17 19:10:15.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:10:15.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.808 -07 000000593 INF: FPGA: Recv ZSGSRD 29835 17-03-17 19:10:15.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.818 -07 000000382 INF: FPGA: Recv ZSGSRD 29832 17-03-17 19:10:15.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.828 -07 000000382 INF: FPGA: Recv ZSGSRD 29835 17-03-17 19:10:15.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.838 -07 000000382 INF: FPGA: Recv ZSGSRD 29837 17-03-17 19:10:15.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.848 -07 000000547 INF: FPGA: Recv ZSGSRD 29830 17-03-17 19:10:15.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:15.858 -07 000000593 INF: FPGA: Recv ZSGSRD 29831 17-03-17 19:10:15.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.868 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:15.868 -07 000000593 INF: FPGA: Recv ZPIEZORD 25496 17-03-17 19:10:15.878 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:15.878 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.399 V. Piezo Error = -9.5 V. 17-03-17 19:10:15.878 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.0 um, Read 10 ADC samples: Avg = 29833 (-131.2 uncal um), Error = 0.8 uncal um, Median = 29832 (-131.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29829 (-131.2 uncal um), Max = 29837 (-131.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-17 19:10:15.878 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29833, posNoise = 4, negNoise = 4 17-03-17 19:10:15.878 -07 000000610 INF: Z Motor: After move to -0.131975, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:15.878 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-17 19:10:15.878 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:15.878 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:15.878 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:15.878 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:15.878 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:15.878 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:15.878 -07 000000541 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:15.878 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:15.878 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:15.878 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:15.878 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:15.878 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:15.878 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:10:15.878 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:15.878 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:10:15.878 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:15.888 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-17 19:10:15.888 -07 000000541 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-17 19:10:15.888 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-17 19:10:15.888 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-17 19:10:15.898 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 29006 150\n [Camera] 17-03-17 19:10:16.098 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:16.398 -07 000000382 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 4.004458, 17-03-17 19:10:16.498 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:16.498 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:16.498 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:16.498 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:16.498 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 1422920864, 0x0, 391868352) start. 17-03-17 19:10:16.498 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:16.498 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:16.498 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:16.498 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:16.498 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start. 17-03-17 19:10:16.658 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:16.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:16.688 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29006 783 17-03-17 19:10:16.838 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:16.878 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 383 ms. 17-03-17 19:10:16.878 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-17 19:10:16.878 -07 000000482 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:16.888 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:16.888 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 1422920864, 0x0, 391868352) end. Duration was 392 ms. 17-03-17 19:10:16.888 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-17 19:10:16.888 -07 000000382 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:16.888 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:16.888 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-17 19:10:16.898 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-17 19:10:17.028 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:17.028 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:17.028 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:17.028 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:17.028 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:17.028 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:17.028 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:17.028 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-17 19:10:17.038 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:17.038 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:10:17.218 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1318 17-03-17 19:10:17.218 -07 000000502 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:17.218 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 29006 150' command took 2 ms to send, 1318 ms to get response, and 1325 ms overall 17-03-17 19:10:17.228 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.132272 17-03-17 19:10:17.228 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13227 mm 17-03-17 19:10:17.228 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:17.228 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True) 17-03-17 19:10:17.228 -07 000000502 INF: Y Motor: Moving to 66.5526 mm, started at 65.7148 mm, delta = 0.8378 mm 17-03-17 19:10:17.228 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 28895, sync = True, waitForSettling = False) 17-03-17 19:10:17.228 -07 000000429 INF: Z Motor: Moving to -0.132273 mm, started at -0.131977 mm, distance = -0.30 um 17-03-17 19:10:17.228 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:17.238 -07 000000429 INF: FPGA: Xmit ZDACW 28895\n [Z Motor] 17-03-17 19:10:17.418 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 378 ms. 17-03-17 19:10:17.418 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms. 17-03-17 19:10:17.418 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:17.418 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 384 ms. 17-03-17 19:10:17.418 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-17 19:10:17.418 -07 000000482 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:17.418 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:17.418 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:17.418 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-17 19:10:17.428 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-17 19:10:17.428 -07 000000482 INF: FPGA: Recv YRDPOS 134584 17-03-17 19:10:17.428 -07 000000482 INF: FPGA: Recv ZDACW 17-03-17 19:10:17.428 -07 000000429 INF: FPGA: 'ZDACW 28895' command took 0 ms to send, 188 ms to get response, and 203 ms overall 17-03-17 19:10:17.428 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:17.428 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 198 ms to get response, and 203 ms overall 17-03-17 19:10:17.428 -07 000000502 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:17.438 -07 000000502 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:17.438 -07 000000502 INF: Y Motor: Moving 1340 steps-16 17-03-17 19:10:17.438 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:17.438 -07 000000482 INF: FPGA: Recv ZDACR 28895 17-03-17 19:10:17.438 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 3 ms to get response, and 4 ms overall 17-03-17 19:10:17.438 -07 000000429 INF: Z Motor: MoveAbsStepped took 208 ms (did NOT wait for settling yet)) 17-03-17 19:10:17.808 -07 000000482 INF: FPGA: Recv YMVTILE 17-03-17 19:10:17.808 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 2 ms to send, 368 ms to get response, and 378 ms overall 17-03-17 19:10:17.848 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:17.848 -07 000000429 INF: FPGA: Recv YRDPOS 136274 17-03-17 19:10:17.858 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:17.858 -07 000000502 INF: Y Motor: Encoder = 136274 = motor step 106464.1 = 66.5400 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:17.858 -07 000000502 INF: Y Motor: Position error before settling (table move) = -26 encoder counts (-0.013 mm) 17-03-17 19:10:17.858 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.216 mm/sec 17-03-17 19:10:18.808 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:18.808 -07 000000429 INF: FPGA: Recv YRDPOS 136274 17-03-17 19:10:18.818 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:18.818 -07 000000502 INF: Y Motor: Encoder = 136274 = motor step 106464.1 = 66.5400 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:18.838 -07 000000502 INF: Y Motor: After move to 66.552605, error = -0.012566, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:18.838 -07 000000502 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:18.838 -07 000000502 INF: Y Motor: Moved to 66.5400 after 1607 ms (table move) 17-03-17 19:10:18.838 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132273 mm (DAC = 28895) 17-03-17 19:10:18.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:18.838 -07 000000502 INF: FPGA: Recv ZSGSRD 29887 17-03-17 19:10:18.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:10:18.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:18.848 -07 000000429 INF: FPGA: Recv ZSGSRD 29880 17-03-17 19:10:18.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:18.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:18.858 -07 000000569 INF: FPGA: Recv ZSGSRD 29880 17-03-17 19:10:18.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:18.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:18.868 -07 000000569 INF: FPGA: Recv ZSGSRD 29882 17-03-17 19:10:18.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:18.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:18.878 -07 000000429 INF: FPGA: Recv ZSGSRD 29886 17-03-17 19:10:18.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:18.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:18.888 -07 000000569 INF: FPGA: Recv ZSGSRD 29878 17-03-17 19:10:18.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:18.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:18.898 -07 000000482 INF: FPGA: Recv ZSGSRD 29881 17-03-17 19:10:18.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:18.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:18.908 -07 000000569 INF: FPGA: Recv ZSGSRD 29870 17-03-17 19:10:18.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:18.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:18.918 -07 000000482 INF: FPGA: Recv ZSGSRD 29882 17-03-17 19:10:18.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:18.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:18.928 -07 000000569 INF: FPGA: Recv ZSGSRD 29884 17-03-17 19:10:18.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:18.938 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:18.938 -07 000000429 INF: FPGA: Recv ZPIEZORD 25544 17-03-17 19:10:18.948 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:18.948 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.409 V. Piezo Error = -9.5 V. 17-03-17 19:10:18.948 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29881 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29882 (-131.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29870 (-131.4 uncal um), Max = 29887 (-131.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um) 17-03-17 19:10:18.948 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29881, posNoise = 6, negNoise = 11 17-03-17 19:10:18.948 -07 000000610 INF: Z Motor: After move to -0.132273, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:18.948 -07 000000610 INF: Z Motor: Settle wait time = 1608 ms, measure time = 107 ms (allowed 150 ms), total time = 1715 ms 17-03-17 19:10:18.948 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:18.998 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1767 ms 17-03-17 19:10:18.998 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:18.998 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5400390625, Z-position -0.132285235019094. ---------- 17-03-17 19:10:18.998 -07 000000610 INF: Cycle 22 Tile 9 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:18.998 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28718, sync = True, waitForSettling = True) 17-03-17 19:10:18.998 -07 000000610 INF: Z Motor: Moving to -0.131463 mm, started at -0.132285 mm, distance = 0.82 um 17-03-17 19:10:18.998 -07 000000610 INF: FPGA: Xmit ZDACW 28718\n [Z Motor] 17-03-17 19:10:18.998 -07 000000502 INF: FPGA: Recv ZDACW 17-03-17 19:10:19.008 -07 000000610 INF: FPGA: 'ZDACW 28718' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:10:19.008 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:19.008 -07 000000482 INF: FPGA: Recv ZDACR 28718 17-03-17 19:10:19.018 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:19.018 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:19.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:19.168 -07 000000429 INF: FPGA: Recv ZSGSRD 29757 17-03-17 19:10:19.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:19.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:19.178 -07 000000482 INF: FPGA: Recv ZSGSRD 29763 17-03-17 19:10:19.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:19.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:19.188 -07 000000429 INF: FPGA: Recv ZSGSRD 29750 17-03-17 19:10:19.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:19.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:19.198 -07 000000482 INF: FPGA: Recv ZSGSRD 29751 17-03-17 19:10:19.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:19.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:19.208 -07 000000429 INF: FPGA: Recv ZSGSRD 29753 17-03-17 19:10:19.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:19.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:19.218 -07 000000482 INF: FPGA: Recv ZSGSRD 29759 17-03-17 19:10:19.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:19.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:19.228 -07 000000502 INF: FPGA: Recv ZSGSRD 29751 17-03-17 19:10:19.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:19.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:19.238 -07 000000482 INF: FPGA: Recv ZSGSRD 29752 17-03-17 19:10:19.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:19.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:19.248 -07 000000462 INF: FPGA: Recv ZSGSRD 29759 17-03-17 19:10:19.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:19.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:19.258 -07 000000569 INF: FPGA: Recv ZSGSRD 29762 17-03-17 19:10:19.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:19.268 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:19.268 -07 000000462 INF: FPGA: Recv ZPIEZORD 25391 17-03-17 19:10:19.278 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:19.278 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.382 V. Piezo Error = -9.6 V. 17-03-17 19:10:19.278 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.5 um, Read 10 ADC samples: Avg = 29756 (-130.7 uncal um), Error = 0.8 uncal um, Median = 29755 (-130.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29750 (-130.7 uncal um), Max = 29763 (-130.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:10:19.278 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29756, posNoise = 7, negNoise = 6 17-03-17 19:10:19.278 -07 000000610 INF: Z Motor: After move to -0.131463, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:19.278 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-17 19:10:19.278 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:19.278 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:19.278 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:19.278 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:19.278 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:19.278 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:19.278 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:19.278 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:19.278 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:19.278 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:19.278 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:19.278 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:19.288 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-17 19:10:19.288 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:19.288 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:10:19.288 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:19.298 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-17 19:10:19.298 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-17 19:10:19.298 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-17 19:10:19.298 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-17 19:10:19.298 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 28895 150\n [Camera] 17-03-17 19:10:19.498 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:19.898 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:19.898 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:19.898 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:19.898 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:19.898 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:19.908 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:19.908 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:19.908 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start. 17-03-17 19:10:19.908 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:19.908 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start. 17-03-17 19:10:20.088 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28895 783 17-03-17 19:10:20.238 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:20.278 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 373 ms. 17-03-17 19:10:20.278 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-17 19:10:20.278 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:20.288 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 373 ms. 17-03-17 19:10:20.288 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-17 19:10:20.288 -07 000000482 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:20.288 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:20.288 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-17 19:10:20.288 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:20.298 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-17 19:10:20.438 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:20.438 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:20.438 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:20.538 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:20.538 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:20.538 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:20.548 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:20.548 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-17 19:10:20.548 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:20.548 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:10:20.628 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:10:20.628 -07 000000448 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:20.628 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 28895 150' command took 2 ms to send, 1312 ms to get response, and 1324 ms overall 17-03-17 19:10:20.628 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.132167 17-03-17 19:10:20.628 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13217 mm 17-03-17 19:10:20.628 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:20.628 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True) 17-03-17 19:10:20.628 -07 000000429 INF: Y Motor: Moving to 67.3826 mm, started at 66.5400 mm, delta = 0.8426 mm 17-03-17 19:10:20.628 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:20.628 -07 000000623 INF: Z Motor: Entering MoveAbsStepped (DAC = 28872, sync = True, waitForSettling = False) 17-03-17 19:10:20.628 -07 000000623 INF: Z Motor: Moving to -0.132168 mm, started at -0.131482 mm, distance = -0.69 um 17-03-17 19:10:20.638 -07 000000623 INF: FPGA: Xmit ZDACW 28872\n [Z Motor] 17-03-17 19:10:20.638 -07 000000618 INF: FPGA: Recv YRDPOS 136274 17-03-17 19:10:20.638 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-17 19:10:20.638 -07 000000429 INF: Y Motor: Encoder = 136274 = motor step 106464.1 = 66.5400 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:20.638 -07 000000429 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:20.638 -07 000000429 INF: Y Motor: Moving 1348 steps-26 17-03-17 19:10:20.638 -07 000000618 INF: FPGA: Recv ZDACW 17-03-17 19:10:20.648 -07 000000623 INF: FPGA: 'ZDACW 28872' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-17 19:10:20.648 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:20.658 -07 000000623 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:20.658 -07 000000618 INF: FPGA: Recv ZDACR 28872 17-03-17 19:10:20.668 -07 000000623 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:10:20.668 -07 000000623 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet)) 17-03-17 19:10:20.928 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 376 ms. 17-03-17 19:10:20.928 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-17 19:10:20.928 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:20.928 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 381 ms. 17-03-17 19:10:20.928 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-17 19:10:20.928 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:20.928 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:20.928 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:20.928 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 496 ms. 17-03-17 19:10:20.938 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-17 19:10:21.018 -07 000000618 INF: FPGA: Recv YMVTILE 17-03-17 19:10:21.018 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-17 19:10:21.058 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:21.058 -07 000000448 INF: FPGA: Recv YRDPOS 137980 17-03-17 19:10:21.068 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:10:21.068 -07 000000429 INF: Y Motor: Encoder = 137980 = motor step 107796.9 = 67.3730 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:21.068 -07 000000429 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm) 17-03-17 19:10:21.068 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.843 mm, average velocity = 2.177 mm/sec 17-03-17 19:10:21.658 -07 000000623 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:21.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:21.758 -07 000000448 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.996267, 17-03-17 19:10:22.018 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:22.018 -07 000000623 INF: FPGA: Recv YRDPOS 137980 17-03-17 19:10:22.028 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:22.028 -07 000000429 INF: Y Motor: Encoder = 137980 = motor step 107796.9 = 67.3730 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:22.048 -07 000000429 INF: Y Motor: After move to 67.382607, error = -0.009560, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:22.048 -07 000000429 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:22.048 -07 000000429 INF: Y Motor: Moved to 67.3730 after 1414 ms (table move) 17-03-17 19:10:22.048 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132168 mm (DAC = 28872) 17-03-17 19:10:22.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.048 -07 000000429 INF: FPGA: Recv ZSGSRD 29863 17-03-17 19:10:22.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:10:22.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.058 -07 000000478 INF: FPGA: Recv ZSGSRD 29856 17-03-17 19:10:22.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.068 -07 000000429 INF: FPGA: Recv ZSGSRD 29866 17-03-17 19:10:22.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.078 -07 000000429 INF: FPGA: Recv ZSGSRD 29869 17-03-17 19:10:22.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.088 -07 000000623 INF: FPGA: Recv ZSGSRD 29860 17-03-17 19:10:22.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.098 -07 000000478 INF: FPGA: Recv ZSGSRD 29868 17-03-17 19:10:22.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.108 -07 000000478 INF: FPGA: Recv ZSGSRD 29863 17-03-17 19:10:22.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.118 -07 000000478 INF: FPGA: Recv ZSGSRD 29859 17-03-17 19:10:22.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.128 -07 000000429 INF: FPGA: Recv ZSGSRD 29860 17-03-17 19:10:22.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.138 -07 000000429 INF: FPGA: Recv ZSGSRD 29861 17-03-17 19:10:22.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.148 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:22.148 -07 000000478 INF: FPGA: Recv ZPIEZORD 25586 17-03-17 19:10:22.158 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.158 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.406 V. Piezo Error = -9.4 V. 17-03-17 19:10:22.158 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29862 (-131.4 uncal um), Error = 0.8 uncal um, Median = 29862 (-131.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29856 (-131.3 uncal um), Max = 29869 (-131.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:10:22.158 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29862, posNoise = 7, negNoise = 6 17-03-17 19:10:22.158 -07 000000610 INF: Z Motor: After move to -0.132168, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:22.158 -07 000000610 INF: Z Motor: Settle wait time = 1416 ms, measure time = 106 ms (allowed 150 ms), total time = 1522 ms 17-03-17 19:10:22.158 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:22.208 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1575 ms 17-03-17 19:10:22.208 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:22.208 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.373046875, Z-position -0.132163174988401. ---------- 17-03-17 19:10:22.208 -07 000000610 INF: Cycle 22 Tile 10 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:22.208 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28695, sync = True, waitForSettling = True) 17-03-17 19:10:22.208 -07 000000610 INF: Z Motor: Moving to -0.131357 mm, started at -0.132163 mm, distance = 0.81 um 17-03-17 19:10:22.208 -07 000000610 INF: FPGA: Xmit ZDACW 28695\n [Z Motor] 17-03-17 19:10:22.208 -07 000000623 INF: FPGA: Recv ZDACW 17-03-17 19:10:22.218 -07 000000610 INF: FPGA: 'ZDACW 28695' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:10:22.218 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:22.218 -07 000000478 INF: FPGA: Recv ZDACR 28695 17-03-17 19:10:22.228 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.228 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:22.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.378 -07 000000623 INF: FPGA: Recv ZSGSRD 29735 17-03-17 19:10:22.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:22.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.388 -07 000000623 INF: FPGA: Recv ZSGSRD 29738 17-03-17 19:10:22.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.398 -07 000000623 INF: FPGA: Recv ZSGSRD 29742 17-03-17 19:10:22.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.408 -07 000000429 INF: FPGA: Recv ZSGSRD 29739 17-03-17 19:10:22.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.418 -07 000000478 INF: FPGA: Recv ZSGSRD 29726 17-03-17 19:10:22.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.428 -07 000000623 INF: FPGA: Recv ZSGSRD 29736 17-03-17 19:10:22.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.438 -07 000000478 INF: FPGA: Recv ZSGSRD 29742 17-03-17 19:10:22.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.448 -07 000000623 INF: FPGA: Recv ZSGSRD 29736 17-03-17 19:10:22.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.458 -07 000000429 INF: FPGA: Recv ZSGSRD 29733 17-03-17 19:10:22.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:22.468 -07 000000382 INF: FPGA: Recv ZSGSRD 29738 17-03-17 19:10:22.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.478 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:22.478 -07 000000478 INF: FPGA: Recv ZPIEZORD 25382 17-03-17 19:10:22.488 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:22.488 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.379 V. Piezo Error = -9.6 V. 17-03-17 19:10:22.488 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29736 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29737 (-130.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29726 (-130.5 uncal um), Max = 29742 (-130.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-17 19:10:22.488 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29736, posNoise = 6, negNoise = 10 17-03-17 19:10:22.488 -07 000000610 INF: Z Motor: After move to -0.131357, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:22.488 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-17 19:10:22.488 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:22.488 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:22.488 -07 000000478 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:22.488 -07 000000623 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:22.488 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:22.488 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:22.488 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:22.488 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:22.498 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:22.498 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:22.498 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:22.498 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:22.498 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:10:22.498 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:22.498 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-17 19:10:22.498 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:22.508 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms. 17-03-17 19:10:22.508 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-17 19:10:22.508 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms. 17-03-17 19:10:22.508 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms. 17-03-17 19:10:22.508 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 28872 150\n [Camera] 17-03-17 19:10:22.718 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:23.108 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:23.108 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:23.118 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:23.118 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:23.118 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:23.118 -07 000000478 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:23.118 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:23.118 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start. 17-03-17 19:10:23.118 -07 000000478 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:23.118 -07 000000478 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start. 17-03-17 19:10:23.308 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28872 783 17-03-17 19:10:23.458 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:23.498 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 384 ms. 17-03-17 19:10:23.498 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-17 19:10:23.498 -07 000000429 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:23.508 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:23.508 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-17 19:10:23.508 -07 000000478 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 386 ms. 17-03-17 19:10:23.508 -07 000000478 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-17 19:10:23.508 -07 000000478 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:23.518 -07 000000478 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:23.518 -07 000000478 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms. 17-03-17 19:10:23.648 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:23.648 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:23.648 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:23.648 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:23.648 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:23.648 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:23.658 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:23.658 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-17 19:10:23.658 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:23.658 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start. 17-03-17 19:10:23.838 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:10:23.838 -07 000000547 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:23.838 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 28872 150' command took 2 ms to send, 1315 ms to get response, and 1326 ms overall 17-03-17 19:10:23.838 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-17 19:10:23.838 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.373046875, Z-Position -0.131353724258539. ------ 17-03-17 19:10:23.848 -07 000000618 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13731 mm 17-03-17 19:10:23.848 -07 000000618 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:23.848 -07 000000593 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:10:23.848 -07 000000561 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:10:23.848 -07 000000627 INF: Z Motor: Entering MoveAbsStepped (DAC = 29995, sync = True, waitForSettling = False) 17-03-17 19:10:23.848 -07 000000627 INF: Z Motor: Moving to -0.137308 mm, started at -0.131354 mm, distance = -5.95 um 17-03-17 19:10:23.848 -07 000000478 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True) 17-03-17 19:10:23.848 -07 000000478 INF: Y Motor: Moving to 68.2126 mm, started at 67.3730 mm, delta = 0.8396 mm 17-03-17 19:10:23.858 -07 000000593 INF: FPGA: 'FOCMRRCUR 80' command took 2 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:10:23.858 -07 000000627 INF: FPGA: Xmit ZDACW 29995\n [Z Motor] 17-03-17 19:10:23.858 -07 000000482 INF: FPGA: Recv ZDACW 17-03-17 19:10:23.868 -07 000000627 INF: FPGA: 'ZDACW 29995' command took 0 ms to send, 0 ms to get response, and 12 ms overall 17-03-17 19:10:23.868 -07 000000627 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:23.868 -07 000000541 INF: FPGA: Recv ZDACR 29995 17-03-17 19:10:23.878 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:23.878 -07 000000627 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:23.878 -07 000000627 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet)) 17-03-17 19:10:23.878 -07 000000482 INF: FPGA: Recv YRDPOS 137980 17-03-17 19:10:23.888 -07 000000593 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:10:23.888 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 31 ms overall 17-03-17 19:10:23.888 -07 000000478 INF: Y Motor: Encoder = 137980 = motor step 107796.9 = 67.3730 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:23.888 -07 000000478 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:23.888 -07 000000478 INF: Y Motor: Moving 1343 steps-20 17-03-17 19:10:23.898 -07 000000478 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:24.028 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 373 ms. 17-03-17 19:10:24.028 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-17 19:10:24.028 -07 000000623 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:24.038 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:24.038 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 381 ms. 17-03-17 19:10:24.038 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-17 19:10:24.038 -07 000000382 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:24.038 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:24.038 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-17 19:10:24.038 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-17 19:10:24.088 -07 000000623 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:10:24.088 -07 000000593 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 232 ms overall 17-03-17 19:10:24.268 -07 000000482 INF: FPGA: Recv YMVTILE 17-03-17 19:10:24.268 -07 000000478 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-17 19:10:24.308 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:24.308 -07 000000382 INF: FPGA: Recv YRDPOS 139685 17-03-17 19:10:24.318 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:10:24.318 -07 000000478 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:24.318 -07 000000478 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm) 17-03-17 19:10:24.318 -07 000000478 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.840 mm, average velocity = 2.164 mm/sec 17-03-17 19:10:25.268 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:25.268 -07 000000482 INF: FPGA: Recv YRDPOS 139685 17-03-17 19:10:25.278 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:25.278 -07 000000478 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:25.288 -07 000000478 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:25.288 -07 000000478 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:25.298 -07 000000478 INF: Y Motor: Moved to 68.2056 after 1441 ms (table move) 17-03-17 19:10:25.298 -07 000000618 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137308 mm (DAC = 29995) 17-03-17 19:10:25.298 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:25.298 -07 000000593 INF: FPGA: Recv ZSGSRD 30670 17-03-17 19:10:25.308 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:10:25.308 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:25.308 -07 000000593 INF: FPGA: Recv ZSGSRD 30663 17-03-17 19:10:25.318 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:25.318 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:25.318 -07 000000593 INF: FPGA: Recv ZSGSRD 30667 17-03-17 19:10:25.328 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:25.328 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:25.328 -07 000000627 INF: FPGA: Recv ZSGSRD 30667 17-03-17 19:10:25.338 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:25.338 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:25.338 -07 000000627 INF: FPGA: Recv ZSGSRD 30666 17-03-17 19:10:25.348 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:25.348 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:25.348 -07 000000627 INF: FPGA: Recv ZSGSRD 30669 17-03-17 19:10:25.358 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:25.358 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:25.358 -07 000000627 INF: FPGA: Recv ZSGSRD 30664 17-03-17 19:10:25.368 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:25.368 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:25.368 -07 000000593 INF: FPGA: Recv ZSGSRD 30658 17-03-17 19:10:25.378 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:25.378 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:25.378 -07 000000627 INF: FPGA: Recv ZSGSRD 30663 17-03-17 19:10:25.388 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:25.388 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:25.388 -07 000000623 INF: FPGA: Recv ZSGSRD 30670 17-03-17 19:10:25.398 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:25.398 -07 000000618 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:25.398 -07 000000623 INF: FPGA: Recv ZPIEZORD 26621 17-03-17 19:10:25.408 -07 000000618 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:25.408 -07 000000618 INF: Z Motor: Piezo is near 36.9 V (nominally 0 to 100 V), expect near 45.8 V, since DAC is at 4.577 V. Piezo Error = -8.9 V. 17-03-17 19:10:25.408 -07 000000618 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.3 um, Read 10 ADC samples: Avg = 30666 (-136.5 uncal um), Error = 0.8 uncal um, Median = 30666 (-136.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30658 (-136.5 uncal um), Max = 30670 (-136.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-17 19:10:25.408 -07 000000618 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30666, posNoise = 4, negNoise = 8 17-03-17 19:10:25.408 -07 000000618 INF: Z Motor: After move to -0.137308, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:25.408 -07 000000618 INF: Z Motor: Settle wait time = 1445 ms, measure time = 108 ms (allowed 150 ms), total time = 1553 ms 17-03-17 19:10:25.408 -07 000000618 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:25.458 -07 000000618 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms 17-03-17 19:10:25.458 -07 000000618 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:25.458 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:25.458 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:25.458 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:25.458 -07 000000623 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:25.468 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:10:25.468 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:25.468 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:25.468 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:10:25.468 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-17 19:10:25.468 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:10:25.478 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms. 17-03-17 19:10:25.478 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms. 17-03-17 19:10:25.488 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:10:25.528 -07 000000618 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:10:25.728 -07 000000618 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:10:25.728 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:10:25.728 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:10:25.728 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2620985504, 0x0, 559484976) start. 17-03-17 19:10:25.768 -07 000000623 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:10:25.768 -07 000000623 INF: FPGA: Recv CAMSNAP 17-03-17 19:10:25.768 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 275 ms to get response, and 285 ms overall 17-03-17 19:10:25.858 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2620985504, 0x0, 559484976) end. Duration was 127 ms. 17-03-17 19:10:25.858 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:25.858 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-17 19:10:25.858 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms. 17-03-17 19:10:25.868 -07 000000618 INF: Autofocus start 17-03-17 19:10:25.868 -07 000000618 INF: MeasureProfile start 17-03-17 19:10:25.868 -07 000000623 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:10:25.878 -07 000000618 INF: MeasureProfile done 17-03-17 19:10:25.878 -07 000000618 INF: X=16 Z correction [um]=0.0530179 17-03-17 19:10:25.878 -07 000000618 INF: Autofocus finished 17-03-17 19:10:25.878 -07 000000618 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:10:25.878 -07 000000623 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 7 ms to get response, and 13 ms overall 17-03-17 19:10:25.878 -07 000000623 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:10:26.088 -07 000000618 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:10:26.088 -07 000000623 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 200 ms to get response, and 202 ms overall 17-03-17 19:10:26.088 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.137328241550377. ---------- 17-03-17 19:10:26.088 -07 000000610 INF: Cycle 22 Tile 11 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:26.088 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28520, sync = True, waitForSettling = True) 17-03-17 19:10:26.098 -07 000000610 INF: Z Motor: Moving to -0.130556 mm, started at -0.137328 mm, distance = 6.77 um 17-03-17 19:10:26.098 -07 000000610 INF: FPGA: Xmit ZDACW 28520\n [Z Motor] 17-03-17 19:10:26.098 -07 000000623 INF: FPGA: Recv ZDACW 17-03-17 19:10:26.108 -07 000000610 INF: FPGA: 'ZDACW 28520' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:26.108 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:26.108 -07 000000623 INF: FPGA: Recv ZDACR 28520 17-03-17 19:10:26.118 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.118 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:26.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:26.268 -07 000000618 INF: FPGA: Recv ZSGSRD 29618 17-03-17 19:10:26.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:26.278 -07 000000623 INF: FPGA: Recv ZSGSRD 29617 17-03-17 19:10:26.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:26.288 -07 000000623 INF: FPGA: Recv ZSGSRD 29612 17-03-17 19:10:26.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:26.298 -07 000000623 INF: FPGA: Recv ZSGSRD 29612 17-03-17 19:10:26.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:26.308 -07 000000618 INF: FPGA: Recv ZSGSRD 29616 17-03-17 19:10:26.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:26.318 -07 000000618 INF: FPGA: Recv ZSGSRD 29615 17-03-17 19:10:26.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:26.328 -07 000000623 INF: FPGA: Recv ZSGSRD 29613 17-03-17 19:10:26.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:26.338 -07 000000618 INF: FPGA: Recv ZSGSRD 29611 17-03-17 19:10:26.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:26.348 -07 000000623 INF: FPGA: Recv ZSGSRD 29609 17-03-17 19:10:26.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:26.358 -07 000000448 INF: FPGA: Recv ZSGSRD 29612 17-03-17 19:10:26.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.368 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:26.368 -07 000000502 INF: FPGA: Recv ZPIEZORD 25243 17-03-17 19:10:26.378 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:26.378 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.352 V. Piezo Error = -9.6 V. 17-03-17 19:10:26.378 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29614 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29612 (-129.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29609 (-129.8 uncal um), Max = 29618 (-129.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:10:26.378 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29614, posNoise = 4, negNoise = 5 17-03-17 19:10:26.378 -07 000000610 INF: Z Motor: After move to -0.130556, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:26.378 -07 000000610 INF: Z Motor: MoveAbsStepped took 282 ms) 17-03-17 19:10:26.378 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:26.378 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:26.378 -07 000000448 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:26.378 -07 000000623 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:26.378 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:26.378 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:26.378 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:26.378 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:26.378 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:26.378 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:26.378 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:26.378 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:26.388 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:10:26.388 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:26.388 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:10:26.388 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:26.398 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-17 19:10:26.398 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:10:26.398 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-17 19:10:26.398 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:10:26.408 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 28696 150\n [Camera] 17-03-17 19:10:26.598 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:26.658 -07 000000623 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:26.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:26.998 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:26.998 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:26.998 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:26.998 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:26.998 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-17 19:10:27.008 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:27.008 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:27.008 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:27.118 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:27.118 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-17 19:10:27.128 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.989471, 17-03-17 19:10:27.198 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28696 783 17-03-17 19:10:27.348 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:27.388 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 384 ms. 17-03-17 19:10:27.388 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-17 19:10:27.388 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:27.388 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:27.388 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-17 19:10:27.488 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 369 ms. 17-03-17 19:10:27.488 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms. 17-03-17 19:10:27.488 -07 000000623 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:27.498 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:27.498 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 496 ms. 17-03-17 19:10:27.538 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:27.538 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:27.538 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:27.538 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:27.538 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:27.538 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:27.548 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:27.548 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-17 19:10:27.548 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:27.548 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-17 19:10:27.728 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:10:27.728 -07 000000502 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:27.728 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 28696 150' command took 2 ms to send, 1314 ms to get response, and 1323 ms overall 17-03-17 19:10:27.728 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.131236 17-03-17 19:10:27.728 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13124 mm 17-03-17 19:10:27.728 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:27.728 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True) 17-03-17 19:10:27.728 -07 000000618 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm 17-03-17 19:10:27.728 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:27.728 -07 000000448 INF: Z Motor: Entering MoveAbsStepped (DAC = 28669, sync = True, waitForSettling = False) 17-03-17 19:10:27.728 -07 000000448 INF: Z Motor: Moving to -0.131238 mm, started at -0.130570 mm, distance = -0.67 um 17-03-17 19:10:27.738 -07 000000448 INF: FPGA: Xmit ZDACW 28669\n [Z Motor] 17-03-17 19:10:27.738 -07 000000623 INF: FPGA: Recv YRDPOS 139686 17-03-17 19:10:27.738 -07 000000623 INF: FPGA: Recv ZDACW 17-03-17 19:10:27.738 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 3 ms to get response, and 4 ms overall 17-03-17 19:10:27.738 -07 000000618 INF: Y Motor: Encoder = 139686 = motor step 109129.7 = 68.2061 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:27.738 -07 000000618 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:27.738 -07 000000618 INF: Y Motor: Moving 1338 steps-14 17-03-17 19:10:27.748 -07 000000448 INF: FPGA: 'ZDACW 28669' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:27.748 -07 000000448 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:27.748 -07 000000502 INF: FPGA: Recv ZDACR 28669 17-03-17 19:10:27.758 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:27.758 -07 000000448 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:27.758 -07 000000448 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet)) 17-03-17 19:10:27.918 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 375 ms. 17-03-17 19:10:27.918 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-17 19:10:27.918 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:27.918 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 376 ms. 17-03-17 19:10:27.918 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-17 19:10:27.918 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:27.928 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:27.928 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:27.928 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-17 19:10:27.938 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-17 19:10:28.128 -07 000000502 INF: FPGA: Recv YMVTILE 17-03-17 19:10:28.128 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 391 ms overall 17-03-17 19:10:28.168 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:28.168 -07 000000502 INF: FPGA: Recv YRDPOS 141369 17-03-17 19:10:28.178 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:10:28.178 -07 000000618 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:28.178 -07 000000618 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-17 19:10:28.178 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 391 ms, distance = 0.837 mm, average velocity = 2.141 mm/sec 17-03-17 19:10:29.128 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:29.128 -07 000000547 INF: FPGA: Recv YRDPOS 141369 17-03-17 19:10:29.138 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:29.138 -07 000000618 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:29.158 -07 000000618 INF: Y Motor: After move to 69.042610, error = -0.014778, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:29.158 -07 000000618 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:29.158 -07 000000618 INF: Y Motor: Moved to 69.0278 after 1423 ms (table move) 17-03-17 19:10:29.158 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131238 mm (DAC = 28669) 17-03-17 19:10:29.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.028 -07 000000448 INF: FPGA: Recv ZSGSRD 29723 17-03-17 19:10:30.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 860 ms to get response, and 864 ms overall 17-03-17 19:10:30.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.048 -07 000000462 INF: FPGA: Recv ZSGSRD 29720 17-03-17 19:10:30.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-17 19:10:30.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.068 -07 000000569 INF: FPGA: Recv ZSGSRD 29721 17-03-17 19:10:30.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:10:30.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.088 -07 000000502 INF: FPGA: Recv ZSGSRD 29717 17-03-17 19:10:30.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:10:30.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.098 -07 000000382 INF: FPGA: Recv ZSGSRD 29719 17-03-17 19:10:30.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.108 -07 000000547 INF: FPGA: Recv ZSGSRD 29719 17-03-17 19:10:30.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.118 -07 000000382 INF: FPGA: Recv ZSGSRD 29716 17-03-17 19:10:30.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.128 -07 000000547 INF: FPGA: Recv ZSGSRD 29723 17-03-17 19:10:30.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.138 -07 000000502 INF: FPGA: Recv ZSGSRD 29720 17-03-17 19:10:30.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.148 -07 000000476 INF: FPGA: Recv ZSGSRD 29717 17-03-17 19:10:30.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.158 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:30.158 -07 000000623 INF: FPGA: Recv ZPIEZORD 25473 17-03-17 19:10:30.168 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.168 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.375 V. Piezo Error = -9.3 V. 17-03-17 19:10:30.168 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.2 um, Read 10 ADC samples: Avg = 29720 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29720 (-130.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29716 (-130.4 uncal um), Max = 29723 (-130.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-17 19:10:30.168 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29720, posNoise = 3, negNoise = 4 17-03-17 19:10:30.168 -07 000000610 INF: Z Motor: After move to -0.131238, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:30.168 -07 000000610 INF: Z Motor: Settle wait time = 1426 ms, measure time = 1005 ms (allowed 150 ms), total time = 2431 ms 17-03-17 19:10:30.168 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 1005 ms, longer than max expected time of 150 ms 17-03-17 19:10:30.168 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2434 ms 17-03-17 19:10:30.168 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:30.168 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02783203125, Z-position -0.131250936864271. ---------- 17-03-17 19:10:30.168 -07 000000610 INF: Cycle 22 Tile 12 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:30.168 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28492, sync = True, waitForSettling = True) 17-03-17 19:10:30.168 -07 000000610 INF: Z Motor: Moving to -0.130428 mm, started at -0.131251 mm, distance = 0.82 um 17-03-17 19:10:30.168 -07 000000610 INF: FPGA: Xmit ZDACW 28492\n [Z Motor] 17-03-17 19:10:30.168 -07 000000502 INF: FPGA: Recv ZDACW 17-03-17 19:10:30.178 -07 000000610 INF: FPGA: 'ZDACW 28492' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:10:30.178 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:30.178 -07 000000502 INF: FPGA: Recv ZDACR 28492 17-03-17 19:10:30.188 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.188 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:30.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.338 -07 000000569 INF: FPGA: Recv ZSGSRD 29593 17-03-17 19:10:30.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.348 -07 000000424 INF: FPGA: Recv ZSGSRD 29593 17-03-17 19:10:30.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.358 -07 000000448 INF: FPGA: Recv ZSGSRD 29592 17-03-17 19:10:30.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.368 -07 000000569 INF: FPGA: Recv ZSGSRD 29587 17-03-17 19:10:30.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.378 -07 000000502 INF: FPGA: Recv ZSGSRD 29594 17-03-17 19:10:30.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.388 -07 000000448 INF: FPGA: Recv ZSGSRD 29594 17-03-17 19:10:30.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.398 -07 000000569 INF: FPGA: Recv ZSGSRD 29597 17-03-17 19:10:30.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.408 -07 000000502 INF: FPGA: Recv ZSGSRD 29594 17-03-17 19:10:30.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.418 -07 000000382 INF: FPGA: Recv ZSGSRD 29588 17-03-17 19:10:30.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:30.428 -07 000000424 INF: FPGA: Recv ZSGSRD 29589 17-03-17 19:10:30.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.438 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:30.438 -07 000000382 INF: FPGA: Recv ZPIEZORD 25258 17-03-17 19:10:30.448 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:30.448 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.348 V. Piezo Error = -9.5 V. 17-03-17 19:10:30.448 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.4 um, Read 10 ADC samples: Avg = 29592 (-129.6 uncal um), Error = 0.8 uncal um, Median = 29593 (-129.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29587 (-129.6 uncal um), Max = 29597 (-129.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:10:30.448 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29592, posNoise = 5, negNoise = 5 17-03-17 19:10:30.448 -07 000000610 INF: Z Motor: After move to -0.130428, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:30.448 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-17 19:10:30.448 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:30.448 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:30.448 -07 000000623 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:30.448 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:30.448 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:30.448 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:30.448 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:30.448 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:30.448 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-17 19:10:30.448 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:30.448 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:30.448 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:30.458 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:10:30.458 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:30.458 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:10:30.458 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:30.468 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 11 ms. 17-03-17 19:10:30.468 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms. 17-03-17 19:10:30.468 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-17 19:10:30.468 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms. 17-03-17 19:10:30.468 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 28669 150\n [Camera] 17-03-17 19:10:30.668 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:31.068 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 592 17-03-17 19:10:31.068 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 592 17-03-17 19:10:31.068 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:31.078 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 592 17-03-17 19:10:31.078 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 592 17-03-17 19:10:31.078 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:31.078 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:31.078 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-17 19:10:31.078 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:31.078 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start. 17-03-17 19:10:31.258 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28669 783 17-03-17 19:10:31.408 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:31.468 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 392 ms. 17-03-17 19:10:31.468 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-17 19:10:31.468 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:31.468 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 390 ms. 17-03-17 19:10:31.468 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-17 19:10:31.468 -07 000000623 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:31.478 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:31.478 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-17 19:10:31.478 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:31.478 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms. 17-03-17 19:10:31.608 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:31.608 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:31.608 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:31.708 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:31.708 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:31.708 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:31.708 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:31.708 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:31.718 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:31.718 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-17 19:10:31.718 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:31.718 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:10:31.798 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:10:31.798 -07 000000623 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:31.798 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 28669 150' command took 2 ms to send, 1312 ms to get response, and 1324 ms overall 17-03-17 19:10:31.798 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.130834 17-03-17 19:10:31.798 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13083 mm 17-03-17 19:10:31.798 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:31.798 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True) 17-03-17 19:10:31.798 -07 000000547 INF: Y Motor: Moving to 69.8726 mm, started at 69.0278 mm, delta = 0.8448 mm 17-03-17 19:10:31.798 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:31.798 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 28581, sync = True, waitForSettling = False) 17-03-17 19:10:31.798 -07 000000502 INF: Z Motor: Moving to -0.130835 mm, started at -0.130429 mm, distance = -0.41 um 17-03-17 19:10:31.808 -07 000000502 INF: FPGA: Xmit ZDACW 28581\n [Z Motor] 17-03-17 19:10:31.808 -07 000000382 INF: FPGA: Recv YRDPOS 141369 17-03-17 19:10:31.808 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:10:31.808 -07 000000547 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:31.808 -07 000000547 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:31.808 -07 000000547 INF: Y Motor: Moving 1352 steps-30 17-03-17 19:10:31.808 -07 000000382 INF: FPGA: Recv ZDACW 17-03-17 19:10:31.818 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:31.818 -07 000000502 INF: FPGA: 'ZDACW 28581' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-17 19:10:31.828 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:31.828 -07 000000623 INF: FPGA: Recv ZDACR 28581 17-03-17 19:10:31.838 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:10:31.838 -07 000000502 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet)) 17-03-17 19:10:32.118 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 400 ms. 17-03-17 19:10:32.118 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-17 19:10:32.118 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:32.118 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 399 ms. 17-03-17 19:10:32.118 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-17 19:10:32.118 -07 000000448 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:32.118 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:32.118 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 514 ms. 17-03-17 19:10:32.118 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:32.128 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 416 ms. 17-03-17 19:10:32.188 -07 000000382 INF: FPGA: Recv YMVTILE 17-03-17 19:10:32.188 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall 17-03-17 19:10:32.228 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:32.228 -07 000000382 INF: FPGA: Recv YRDPOS 143081 17-03-17 19:10:32.238 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:32.238 -07 000000547 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:32.238 -07 000000547 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm) 17-03-17 19:10:32.238 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.845 mm, average velocity = 2.189 mm/sec 17-03-17 19:10:32.488 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.981281, 17-03-17 19:10:33.188 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:33.188 -07 000000476 INF: FPGA: Recv YRDPOS 143081 17-03-17 19:10:33.198 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.198 -07 000000547 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:33.218 -07 000000547 INF: Y Motor: After move to 69.872612, error = -0.008842, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:33.218 -07 000000547 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:33.218 -07 000000547 INF: Y Motor: Moved to 69.8638 after 1414 ms (table move) 17-03-17 19:10:33.218 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130835 mm (DAC = 28581) 17-03-17 19:10:33.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.218 -07 000000547 INF: FPGA: Recv ZSGSRD 29657 17-03-17 19:10:33.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:10:33.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.228 -07 000000476 INF: FPGA: Recv ZSGSRD 29657 17-03-17 19:10:33.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.238 -07 000000623 INF: FPGA: Recv ZSGSRD 29658 17-03-17 19:10:33.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.248 -07 000000382 INF: FPGA: Recv ZSGSRD 29662 17-03-17 19:10:33.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.258 -07 000000502 INF: FPGA: Recv ZSGSRD 29662 17-03-17 19:10:33.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.268 -07 000000569 INF: FPGA: Recv ZSGSRD 29655 17-03-17 19:10:33.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.278 -07 000000541 INF: FPGA: Recv ZSGSRD 29656 17-03-17 19:10:33.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.288 -07 000000482 INF: FPGA: Recv ZSGSRD 29646 17-03-17 19:10:33.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.298 -07 000000502 INF: FPGA: Recv ZSGSRD 29647 17-03-17 19:10:33.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.308 -07 000000569 INF: FPGA: Recv ZSGSRD 29657 17-03-17 19:10:33.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.318 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:33.318 -07 000000382 INF: FPGA: Recv ZPIEZORD 25373 17-03-17 19:10:33.328 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.328 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.361 V. Piezo Error = -9.4 V. 17-03-17 19:10:33.328 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.8 um, Read 10 ADC samples: Avg = 29656 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29657 (-130.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29646 (-130.0 uncal um), Max = 29662 (-130.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-17 19:10:33.328 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29656, posNoise = 6, negNoise = 10 17-03-17 19:10:33.328 -07 000000610 INF: Z Motor: After move to -0.130835, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:33.328 -07 000000610 INF: Z Motor: Settle wait time = 1415 ms, measure time = 107 ms (allowed 150 ms), total time = 1522 ms 17-03-17 19:10:33.328 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:33.378 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1575 ms 17-03-17 19:10:33.378 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:33.378 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86376953125, Z-position -0.130839787287198. ---------- 17-03-17 19:10:33.378 -07 000000610 INF: Cycle 22 Tile 13 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:33.378 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28404, sync = True, waitForSettling = True) 17-03-17 19:10:33.378 -07 000000610 INF: Z Motor: Moving to -0.130025 mm, started at -0.130840 mm, distance = 0.81 um 17-03-17 19:10:33.378 -07 000000610 INF: FPGA: Xmit ZDACW 28404\n [Z Motor] 17-03-17 19:10:33.378 -07 000000569 INF: FPGA: Recv ZDACW 17-03-17 19:10:33.388 -07 000000610 INF: FPGA: 'ZDACW 28404' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:10:33.388 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:33.388 -07 000000541 INF: FPGA: Recv ZDACR 28404 17-03-17 19:10:33.398 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.398 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:33.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.548 -07 000000547 INF: FPGA: Recv ZSGSRD 29534 17-03-17 19:10:33.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.558 -07 000000541 INF: FPGA: Recv ZSGSRD 29530 17-03-17 19:10:33.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.568 -07 000000502 INF: FPGA: Recv ZSGSRD 29530 17-03-17 19:10:33.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.578 -07 000000547 INF: FPGA: Recv ZSGSRD 29526 17-03-17 19:10:33.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.588 -07 000000502 INF: FPGA: Recv ZSGSRD 29537 17-03-17 19:10:33.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.598 -07 000000541 INF: FPGA: Recv ZSGSRD 29528 17-03-17 19:10:33.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.608 -07 000000502 INF: FPGA: Recv ZSGSRD 29527 17-03-17 19:10:33.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.618 -07 000000476 INF: FPGA: Recv ZSGSRD 29526 17-03-17 19:10:33.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.628 -07 000000382 INF: FPGA: Recv ZSGSRD 29530 17-03-17 19:10:33.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:33.638 -07 000000541 INF: FPGA: Recv ZSGSRD 29538 17-03-17 19:10:33.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.648 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:33.648 -07 000000547 INF: FPGA: Recv ZPIEZORD 25203 17-03-17 19:10:33.658 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:33.658 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.334 V. Piezo Error = -9.5 V. 17-03-17 19:10:33.658 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.0 um, Read 10 ADC samples: Avg = 29531 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29530 (-129.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29526 (-129.2 uncal um), Max = 29538 (-129.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:10:33.658 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29531, posNoise = 7, negNoise = 5 17-03-17 19:10:33.658 -07 000000610 INF: Z Motor: After move to -0.130025, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:33.658 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-17 19:10:33.658 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:33.658 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:33.658 -07 000000382 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:33.658 -07 000000541 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:33.658 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:33.658 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:33.658 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:33.658 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:33.658 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:33.658 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:33.658 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:33.658 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:33.668 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:10:33.668 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:33.668 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:10:33.668 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:33.668 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-17 19:10:33.668 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-17 19:10:33.678 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-17 19:10:33.678 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms. 17-03-17 19:10:33.678 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 28581 150\n [Camera] 17-03-17 19:10:33.878 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:34.278 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:34.278 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:34.278 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:34.278 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:34.278 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:34.278 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:34.278 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:34.278 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start. 17-03-17 19:10:34.278 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:34.278 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-17 19:10:34.468 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28581 783 17-03-17 19:10:34.618 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:34.648 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 368 ms. 17-03-17 19:10:34.648 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms. 17-03-17 19:10:34.648 -07 000000448 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:34.658 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 375 ms. 17-03-17 19:10:34.658 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms. 17-03-17 19:10:34.658 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:34.658 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-17 19:10:34.658 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:34.658 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-17 19:10:34.668 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-17 19:10:34.808 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:34.808 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:34.808 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:34.808 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:34.808 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:34.808 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:34.918 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:34.918 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start. 17-03-17 19:10:34.918 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:34.918 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start. 17-03-17 19:10:34.998 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:10:34.998 -07 000000476 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:34.998 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 28581 150' command took 2 ms to send, 1316 ms to get response, and 1324 ms overall 17-03-17 19:10:34.998 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.130373 17-03-17 19:10:34.998 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.13037 mm 17-03-17 19:10:34.998 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:35.008 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True) 17-03-17 19:10:35.008 -07 000000547 INF: Y Motor: Moving to 70.7026 mm, started at 69.8638 mm, delta = 0.8388 mm 17-03-17 19:10:35.008 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:35.008 -07 000000448 INF: Z Motor: Entering MoveAbsStepped (DAC = 28480, sync = True, waitForSettling = False) 17-03-17 19:10:35.008 -07 000000448 INF: Z Motor: Moving to -0.130373 mm, started at -0.130037 mm, distance = -0.34 um 17-03-17 19:10:35.008 -07 000000382 INF: FPGA: Recv YRDPOS 143081 17-03-17 19:10:35.018 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:35.018 -07 000000547 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:35.018 -07 000000547 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:35.018 -07 000000547 INF: Y Motor: Moving 1342 steps-18 17-03-17 19:10:35.018 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:35.028 -07 000000448 INF: FPGA: Xmit ZDACW 28480\n [Z Motor] 17-03-17 19:10:35.318 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 402 ms. 17-03-17 19:10:35.318 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-17 19:10:35.318 -07 000000569 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:35.318 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 401 ms. 17-03-17 19:10:35.318 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-17 19:10:35.318 -07 000000502 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:35.318 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:35.318 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 513 ms. 17-03-17 19:10:35.328 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:35.328 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 519 ms. 17-03-17 19:10:35.328 -07 000000476 INF: FPGA: Recv ZDACW 17-03-17 19:10:35.328 -07 000000448 INF: FPGA: 'ZDACW 28480' command took 0 ms to send, 299 ms to get response, and 327 ms overall 17-03-17 19:10:35.328 -07 000000448 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:35.338 -07 000000476 INF: FPGA: Recv ZDACR 28480 17-03-17 19:10:35.348 -07 000000448 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:35.348 -07 000000448 INF: Z Motor: MoveAbsStepped took 338 ms (did NOT wait for settling yet)) 17-03-17 19:10:35.388 -07 000000476 INF: FPGA: Recv YMVTILE 17-03-17 19:10:35.388 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall 17-03-17 19:10:35.428 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:35.428 -07 000000502 INF: FPGA: Recv YRDPOS 144771 17-03-17 19:10:35.438 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:35.438 -07 000000547 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:35.438 -07 000000547 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm) 17-03-17 19:10:35.438 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.839 mm, average velocity = 2.219 mm/sec 17-03-17 19:10:36.388 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:36.388 -07 000000448 INF: FPGA: Recv YRDPOS 144772 17-03-17 19:10:36.398 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:36.398 -07 000000547 INF: Y Motor: Encoder = 144772 = motor step 113103.1 = 70.6895 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:36.418 -07 000000547 INF: Y Motor: After move to 70.702606, error = -0.013153, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:36.418 -07 000000547 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 1 counts (0.000 mm) 17-03-17 19:10:36.418 -07 000000547 INF: Y Motor: Moved to 70.6895 after 1410 ms (table move) 17-03-17 19:10:36.418 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130373 mm (DAC = 28480) 17-03-17 19:10:36.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.418 -07 000000448 INF: FPGA: Recv ZSGSRD 29590 17-03-17 19:10:36.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:10:36.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.428 -07 000000547 INF: FPGA: Recv ZSGSRD 29583 17-03-17 19:10:36.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.438 -07 000000547 INF: FPGA: Recv ZSGSRD 29583 17-03-17 19:10:36.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.448 -07 000000547 INF: FPGA: Recv ZSGSRD 29581 17-03-17 19:10:36.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.458 -07 000000502 INF: FPGA: Recv ZSGSRD 29591 17-03-17 19:10:36.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.468 -07 000000547 INF: FPGA: Recv ZSGSRD 29586 17-03-17 19:10:36.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.478 -07 000000502 INF: FPGA: Recv ZSGSRD 29586 17-03-17 19:10:36.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.488 -07 000000547 INF: FPGA: Recv ZSGSRD 29580 17-03-17 19:10:36.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.498 -07 000000547 INF: FPGA: Recv ZSGSRD 29577 17-03-17 19:10:36.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.508 -07 000000502 INF: FPGA: Recv ZSGSRD 29587 17-03-17 19:10:36.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.518 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:36.518 -07 000000476 INF: FPGA: Recv ZPIEZORD 25247 17-03-17 19:10:36.528 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.528 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.346 V. Piezo Error = -9.5 V. 17-03-17 19:10:36.528 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.4 um, Read 10 ADC samples: Avg = 29584 (-129.6 uncal um), Error = 0.8 uncal um, Median = 29584 (-129.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29577 (-129.6 uncal um), Max = 29591 (-129.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-17 19:10:36.528 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29584, posNoise = 7, negNoise = 7 17-03-17 19:10:36.528 -07 000000610 INF: Z Motor: After move to -0.130373, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:36.528 -07 000000610 INF: Z Motor: Settle wait time = 1412 ms, measure time = 106 ms (allowed 150 ms), total time = 1518 ms 17-03-17 19:10:36.528 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:36.578 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1571 ms 17-03-17 19:10:36.578 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:36.578 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.689453125, Z-position -0.130377244012991. ---------- 17-03-17 19:10:36.578 -07 000000610 INF: Cycle 22 Tile 14 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:36.578 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28303, sync = True, waitForSettling = True) 17-03-17 19:10:36.578 -07 000000610 INF: Z Motor: Moving to -0.129563 mm, started at -0.130377 mm, distance = 0.81 um 17-03-17 19:10:36.578 -07 000000610 INF: FPGA: Xmit ZDACW 28303\n [Z Motor] 17-03-17 19:10:36.578 -07 000000448 INF: FPGA: Recv ZDACW 17-03-17 19:10:36.588 -07 000000610 INF: FPGA: 'ZDACW 28303' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:10:36.588 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:36.588 -07 000000502 INF: FPGA: Recv ZDACR 28303 17-03-17 19:10:36.598 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.598 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:36.658 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:36.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:36.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.748 -07 000000448 INF: FPGA: Recv ZSGSRD 29456 17-03-17 19:10:36.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:36.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.758 -07 000000476 INF: FPGA: Recv ZSGSRD 29463 17-03-17 19:10:36.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.768 -07 000000561 INF: FPGA: Recv ZSGSRD 29460 17-03-17 19:10:36.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.778 -07 000000561 INF: FPGA: Recv ZSGSRD 29456 17-03-17 19:10:36.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.788 -07 000000547 INF: FPGA: Recv ZSGSRD 29459 17-03-17 19:10:36.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.798 -07 000000561 INF: FPGA: Recv ZSGSRD 29454 17-03-17 19:10:36.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.808 -07 000000561 INF: FPGA: Recv ZSGSRD 29455 17-03-17 19:10:36.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.818 -07 000000547 INF: FPGA: Recv ZSGSRD 29452 17-03-17 19:10:36.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.828 -07 000000547 INF: FPGA: Recv ZSGSRD 29452 17-03-17 19:10:36.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:36.838 -07 000000476 INF: FPGA: Recv ZSGSRD 29461 17-03-17 19:10:36.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.848 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:36.848 -07 000000561 INF: FPGA: Recv ZPIEZORD 25101 17-03-17 19:10:36.858 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:36.858 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.319 V. Piezo Error = -9.6 V. 17-03-17 19:10:36.858 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.6 um, Read 10 ADC samples: Avg = 29457 (-128.8 uncal um), Error = 0.8 uncal um, Median = 29456 (-128.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29452 (-128.8 uncal um), Max = 29463 (-128.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:10:36.858 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29457, posNoise = 6, negNoise = 5 17-03-17 19:10:36.858 -07 000000610 INF: Z Motor: After move to -0.129563, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:36.858 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-17 19:10:36.858 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:36.858 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:36.858 -07 000000476 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:36.858 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:36.858 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:36.858 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:36.858 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:36.858 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:36.858 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:36.858 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:36.858 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:36.858 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:36.868 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:10:36.868 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:36.868 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-17 19:10:36.868 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:36.878 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-17 19:10:36.878 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:10:36.878 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:10:36.878 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:10:36.888 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 28480 150\n [Camera] 17-03-17 19:10:37.088 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:37.478 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:37.478 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:37.488 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:37.488 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:37.488 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:37.488 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:37.488 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:37.488 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-17 19:10:37.498 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:37.498 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-17 19:10:37.678 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28480 783 17-03-17 19:10:37.828 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:37.848 -07 000000478 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.999021, 17-03-17 19:10:37.858 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 364 ms. 17-03-17 19:10:37.858 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 364 ms. 17-03-17 19:10:37.858 -07 000000476 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:37.858 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:37.868 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 374 ms. 17-03-17 19:10:37.868 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms. 17-03-17 19:10:37.868 -07 000000547 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:37.868 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:37.868 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-17 19:10:37.868 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-17 19:10:38.018 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:38.018 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:38.018 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:38.018 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:38.018 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:38.018 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:38.018 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:38.018 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-17 19:10:38.028 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:38.028 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start. 17-03-17 19:10:38.208 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:10:38.208 -07 000000448 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:38.208 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 28480 150' command took 2 ms to send, 1314 ms to get response, and 1323 ms overall 17-03-17 19:10:38.208 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-17 19:10:38.208 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.689453125, Z-Position -0.129561369070988. ------ 17-03-17 19:10:38.208 -07 000000476 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:10:38.208 -07 000000593 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.13624 mm 17-03-17 19:10:38.208 -07 000000593 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:38.218 -07 000000502 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:10:38.218 -07 000000476 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-17 19:10:38.218 -07 000000476 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:10:38.218 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True) 17-03-17 19:10:38.218 -07 000000618 INF: Y Motor: Moving to 71.5326 mm, started at 70.6895 mm, delta = 0.8432 mm 17-03-17 19:10:38.218 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 29761, sync = True, waitForSettling = False) 17-03-17 19:10:38.218 -07 000000462 INF: Z Motor: Moving to -0.136237 mm, started at -0.129561 mm, distance = -6.68 um 17-03-17 19:10:38.228 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:38.228 -07 000000448 INF: FPGA: Recv YRDPOS 144772 17-03-17 19:10:38.238 -07 000000462 INF: FPGA: Xmit ZDACW 29761\n [Z Motor] 17-03-17 19:10:38.238 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-17 19:10:38.238 -07 000000618 INF: Y Motor: Encoder = 144772 = motor step 113103.1 = 70.6895 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:38.238 -07 000000618 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:38.238 -07 000000618 INF: Y Motor: Moving 1349 steps-28 17-03-17 19:10:38.238 -07 000000502 INF: FPGA: Recv ZDACW 17-03-17 19:10:38.248 -07 000000462 INF: FPGA: 'ZDACW 29761' command took 0 ms to send, 0 ms to get response, and 24 ms overall 17-03-17 19:10:38.248 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:38.248 -07 000000547 INF: FPGA: Recv ZDACR 29761 17-03-17 19:10:38.258 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:38.258 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:38.258 -07 000000462 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet)) 17-03-17 19:10:38.408 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 384 ms. 17-03-17 19:10:38.408 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-17 19:10:38.408 -07 000000627 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:38.408 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 382 ms. 17-03-17 19:10:38.408 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms. 17-03-17 19:10:38.408 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:38.408 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:38.408 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-17 19:10:38.408 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:38.418 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms. 17-03-17 19:10:38.418 -07 000000448 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:10:38.418 -07 000000476 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 196 ms to get response, and 203 ms overall 17-03-17 19:10:38.628 -07 000000627 INF: FPGA: Recv YMVTILE 17-03-17 19:10:38.628 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-17 19:10:38.668 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:38.668 -07 000000541 INF: FPGA: Recv YRDPOS 146472 17-03-17 19:10:38.678 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:10:38.678 -07 000000618 INF: Y Motor: Encoder = 146472 = motor step 114431.3 = 71.5195 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:38.678 -07 000000618 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm) 17-03-17 19:10:38.678 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.124 mm/sec 17-03-17 19:10:39.628 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:39.628 -07 000000541 INF: FPGA: Recv YRDPOS 146472 17-03-17 19:10:39.638 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:39.638 -07 000000618 INF: Y Motor: Encoder = 146472 = motor step 114431.3 = 71.5195 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:39.658 -07 000000618 INF: Y Motor: After move to 71.532608, error = -0.013077, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:39.658 -07 000000618 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:39.658 -07 000000618 INF: Y Motor: Moved to 71.5195 after 1437 ms (table move) 17-03-17 19:10:39.658 -07 000000593 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136237 mm (DAC = 29761) 17-03-17 19:10:39.658 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:39.658 -07 000000618 INF: FPGA: Recv ZSGSRD 30495 17-03-17 19:10:39.668 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:10:39.668 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:39.668 -07 000000541 INF: FPGA: Recv ZSGSRD 30488 17-03-17 19:10:39.678 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:39.678 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:39.678 -07 000000541 INF: FPGA: Recv ZSGSRD 30489 17-03-17 19:10:39.688 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:39.688 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:39.688 -07 000000541 INF: FPGA: Recv ZSGSRD 30500 17-03-17 19:10:39.698 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:39.698 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:39.698 -07 000000541 INF: FPGA: Recv ZSGSRD 30498 17-03-17 19:10:39.708 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:39.708 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:39.708 -07 000000618 INF: FPGA: Recv ZSGSRD 30501 17-03-17 19:10:39.718 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:39.718 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:39.718 -07 000000618 INF: FPGA: Recv ZSGSRD 30500 17-03-17 19:10:39.728 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:39.728 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:39.728 -07 000000618 INF: FPGA: Recv ZSGSRD 30494 17-03-17 19:10:39.738 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:39.738 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:39.738 -07 000000618 INF: FPGA: Recv ZSGSRD 30494 17-03-17 19:10:39.748 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:39.748 -07 000000593 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:39.748 -07 000000618 INF: FPGA: Recv ZSGSRD 30493 17-03-17 19:10:39.758 -07 000000593 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:39.758 -07 000000593 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:39.758 -07 000000618 INF: FPGA: Recv ZPIEZORD 26444 17-03-17 19:10:39.768 -07 000000593 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:39.768 -07 000000593 INF: Z Motor: Piezo is near 36.5 V (nominally 0 to 100 V), expect near 45.4 V, since DAC is at 4.541 V. Piezo Error = -8.9 V. 17-03-17 19:10:39.768 -07 000000593 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.2 um, Read 10 ADC samples: Avg = 30495 (-135.4 uncal um), Error = 0.8 uncal um, Median = 30494 (-135.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 30488 (-135.4 uncal um), Max = 30501 (-135.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-17 19:10:39.768 -07 000000593 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30495, posNoise = 6, negNoise = 7 17-03-17 19:10:39.768 -07 000000593 INF: Z Motor: After move to -0.136237, error = 0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:39.768 -07 000000593 INF: Z Motor: Settle wait time = 1440 ms, measure time = 105 ms (allowed 150 ms), total time = 1545 ms 17-03-17 19:10:39.768 -07 000000593 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:39.818 -07 000000593 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms 17-03-17 19:10:39.818 -07 000000593 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:39.818 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:39.818 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:39.818 -07 000000593 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:39.818 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:39.828 -07 000000593 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:10:39.828 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:39.828 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:39.828 -07 000000593 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:10:39.828 -07 000000593 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms. 17-03-17 19:10:39.828 -07 000000593 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:10:39.838 -07 000000593 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms. 17-03-17 19:10:39.838 -07 000000593 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms. 17-03-17 19:10:39.848 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:10:39.888 -07 000000593 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:10:40.088 -07 000000618 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:10:40.088 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:10:40.088 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:10:40.098 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) start. 17-03-17 19:10:40.128 -07 000000593 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:10:40.128 -07 000000593 INF: FPGA: Recv CAMSNAP 17-03-17 19:10:40.128 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 276 ms to get response, and 285 ms overall 17-03-17 19:10:40.218 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) end. Duration was 128 ms. 17-03-17 19:10:40.218 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:40.218 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-17 19:10:40.218 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 131 ms. 17-03-17 19:10:40.328 -07 000000593 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:10:40.328 -07 000000618 INF: Autofocus start 17-03-17 19:10:40.328 -07 000000618 INF: MeasureProfile start 17-03-17 19:10:40.338 -07 000000618 INF: MeasureProfile done 17-03-17 19:10:40.338 -07 000000618 INF: X=0 Z correction [um]=-0.02394831 17-03-17 19:10:40.338 -07 000000618 INF: Autofocus finished 17-03-17 19:10:40.338 -07 000000618 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:10:40.338 -07 000000593 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 7 ms to get response, and 14 ms overall 17-03-17 19:10:40.338 -07 000000593 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:10:40.548 -07 000000618 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:10:40.548 -07 000000593 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 201 ms to get response, and 202 ms overall 17-03-17 19:10:40.548 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51953125, Z-position -0.136229701274135. ---------- 17-03-17 19:10:40.548 -07 000000610 INF: Cycle 22 Tile 15 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:40.548 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28268, sync = True, waitForSettling = True) 17-03-17 19:10:40.548 -07 000000610 INF: Z Motor: Moving to -0.129403 mm, started at -0.136230 mm, distance = 6.83 um 17-03-17 19:10:40.548 -07 000000610 INF: FPGA: Xmit ZDACW 28268\n [Z Motor] 17-03-17 19:10:40.558 -07 000000593 INF: FPGA: Recv ZDACW 17-03-17 19:10:40.568 -07 000000610 INF: FPGA: 'ZDACW 28268' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:40.568 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:40.568 -07 000000382 INF: FPGA: Recv ZDACR 28268 17-03-17 19:10:40.578 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:40.578 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:40.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:40.728 -07 000000618 INF: FPGA: Recv ZSGSRD 29438 17-03-17 19:10:40.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:40.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:40.738 -07 000000382 INF: FPGA: Recv ZSGSRD 29437 17-03-17 19:10:40.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:40.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:40.748 -07 000000618 INF: FPGA: Recv ZSGSRD 29431 17-03-17 19:10:40.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:40.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:40.758 -07 000000382 INF: FPGA: Recv ZSGSRD 29430 17-03-17 19:10:40.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:40.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:40.768 -07 000000593 INF: FPGA: Recv ZSGSRD 29430 17-03-17 19:10:40.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:40.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:40.778 -07 000000618 INF: FPGA: Recv ZSGSRD 29434 17-03-17 19:10:40.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:40.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:40.788 -07 000000593 INF: FPGA: Recv ZSGSRD 29439 17-03-17 19:10:40.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:40.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:40.798 -07 000000569 INF: FPGA: Recv ZSGSRD 29433 17-03-17 19:10:40.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:40.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:40.808 -07 000000593 INF: FPGA: Recv ZSGSRD 29433 17-03-17 19:10:40.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:40.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:40.818 -07 000000382 INF: FPGA: Recv ZSGSRD 29427 17-03-17 19:10:40.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:40.828 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:40.828 -07 000000593 INF: FPGA: Recv ZPIEZORD 25038 17-03-17 19:10:40.838 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:40.838 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.313 V. Piezo Error = -9.6 V. 17-03-17 19:10:40.838 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.4 um, Read 10 ADC samples: Avg = 29433 (-128.6 uncal um), Error = 0.8 uncal um, Median = 29433 (-128.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29427 (-128.6 uncal um), Max = 29439 (-128.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:10:40.838 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29433, posNoise = 6, negNoise = 6 17-03-17 19:10:40.838 -07 000000610 INF: Z Motor: After move to -0.129403, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:40.838 -07 000000610 INF: Z Motor: MoveAbsStepped took 283 ms) 17-03-17 19:10:40.838 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:40.838 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:40.838 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:40.838 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:40.838 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:40.838 -07 000000593 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:40.838 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:40.838 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:40.838 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:40.838 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:40.838 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:40.838 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:40.848 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-17 19:10:40.848 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:40.848 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:10:40.848 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:40.858 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-17 19:10:40.858 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:10:40.858 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-17 19:10:40.858 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-17 19:10:40.858 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 28445 150\n [Camera] 17-03-17 19:10:41.068 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:41.468 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:41.468 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:41.468 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:41.468 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:41.468 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-17 19:10:41.468 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:41.468 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:41.468 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:41.468 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:41.468 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) start. 17-03-17 19:10:41.658 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28445 783 17-03-17 19:10:41.658 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:41.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:41.808 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:41.848 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 377 ms. 17-03-17 19:10:41.848 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-17 19:10:41.848 -07 000000623 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:41.848 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) end. Duration was 374 ms. 17-03-17 19:10:41.848 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-17 19:10:41.848 -07 000000382 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:41.848 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:41.848 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-17 19:10:41.848 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:41.868 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-17 19:10:41.998 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:41.998 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:41.998 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:41.998 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:41.998 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:41.998 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:41.998 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start. 17-03-17 19:10:41.998 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:41.998 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:41.998 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start. 17-03-17 19:10:42.188 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:10:42.188 -07 000000569 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:42.188 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 28445 150' command took 2 ms to send, 1317 ms to get response, and 1327 ms overall 17-03-17 19:10:42.188 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.129417 17-03-17 19:10:42.188 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.12942 mm 17-03-17 19:10:42.188 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:42.308 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 28271, sync = True, waitForSettling = False) 17-03-17 19:10:42.308 -07 000000618 INF: Z Motor: Moving to -0.129416 mm, started at -0.129407 mm, distance = -0.01 um 17-03-17 19:10:42.308 -07 000000618 INF: FPGA: Xmit ZDACW 28271\n [Z Motor] 17-03-17 19:10:42.308 -07 000000593 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True) 17-03-17 19:10:42.308 -07 000000593 INF: Y Motor: Moving to 72.3626 mm, started at 71.5195 mm, delta = 0.8431 mm 17-03-17 19:10:42.308 -07 000000502 INF: FPGA: Recv ZDACW 17-03-17 19:10:42.318 -07 000000593 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:42.318 -07 000000618 INF: FPGA: 'ZDACW 28271' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:10:42.318 -07 000000462 INF: FPGA: Recv YRDPOS 146473 17-03-17 19:10:42.328 -07 000000593 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 17 ms overall 17-03-17 19:10:42.328 -07 000000593 INF: Y Motor: Encoder = 146473 = motor step 114432.0 = 71.5200 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:42.328 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:42.328 -07 000000593 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:42.328 -07 000000593 INF: Y Motor: Moving 1348 steps-27 17-03-17 19:10:42.328 -07 000000382 INF: FPGA: Recv ZDACR 28271 17-03-17 19:10:42.338 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:10:42.338 -07 000000618 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet)) 17-03-17 19:10:42.338 -07 000000593 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:42.388 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 380 ms. 17-03-17 19:10:42.388 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms. 17-03-17 19:10:42.388 -07 000000482 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:42.388 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:42.388 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 386 ms. 17-03-17 19:10:42.388 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-17 19:10:42.388 -07 000000623 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:42.388 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:42.388 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-17 19:10:42.398 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-17 19:10:43.608 -07 000000448 INF: FPGA: Recv YMVTILE 17-03-17 19:10:43.608 -07 000000593 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 1261 ms to get response, and 1276 ms overall 17-03-17 19:10:43.638 -07 000000593 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:43.638 -07 000000618 INF: FPGA: Recv YRDPOS 148173 17-03-17 19:10:43.648 -07 000000593 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:10:43.648 -07 000000593 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:43.648 -07 000000593 INF: Y Motor: Position error before settling (table move) = -26 encoder counts (-0.013 mm) 17-03-17 19:10:43.648 -07 000000593 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 1276 ms, distance = 0.843 mm, average velocity = 0.661 mm/sec 17-03-17 19:10:43.918 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.999021, 17-03-17 19:10:44.598 -07 000000593 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:44.598 -07 000000382 INF: FPGA: Recv YRDPOS 148173 17-03-17 19:10:44.608 -07 000000593 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:44.608 -07 000000593 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:44.628 -07 000000593 INF: Y Motor: After move to 72.362610, error = -0.012512, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:44.628 -07 000000593 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:44.628 -07 000000593 INF: Y Motor: Moved to 72.3501 after 2320 ms (table move) 17-03-17 19:10:44.628 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129416 mm (DAC = 28271) 17-03-17 19:10:44.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.628 -07 000000569 INF: FPGA: Recv ZSGSRD 29433 17-03-17 19:10:44.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:10:44.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.638 -07 000000569 INF: FPGA: Recv ZSGSRD 29430 17-03-17 19:10:44.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.648 -07 000000623 INF: FPGA: Recv ZSGSRD 29435 17-03-17 19:10:44.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.658 -07 000000462 INF: FPGA: Recv ZSGSRD 29428 17-03-17 19:10:44.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.668 -07 000000623 INF: FPGA: Recv ZSGSRD 29440 17-03-17 19:10:44.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.678 -07 000000462 INF: FPGA: Recv ZSGSRD 29439 17-03-17 19:10:44.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.688 -07 000000623 INF: FPGA: Recv ZSGSRD 29431 17-03-17 19:10:44.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.698 -07 000000382 INF: FPGA: Recv ZSGSRD 29435 17-03-17 19:10:44.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.708 -07 000000623 INF: FPGA: Recv ZSGSRD 29433 17-03-17 19:10:44.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.718 -07 000000382 INF: FPGA: Recv ZSGSRD 29439 17-03-17 19:10:44.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.728 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:44.728 -07 000000623 INF: FPGA: Recv ZPIEZORD 25106 17-03-17 19:10:44.738 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.738 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.314 V. Piezo Error = -9.5 V. 17-03-17 19:10:44.738 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.4 um, Read 10 ADC samples: Avg = 29434 (-128.6 uncal um), Error = 0.8 uncal um, Median = 29434 (-128.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29428 (-128.6 uncal um), Max = 29440 (-128.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-17 19:10:44.738 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29434, posNoise = 6, negNoise = 6 17-03-17 19:10:44.738 -07 000000610 INF: Z Motor: After move to -0.129416, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:44.738 -07 000000610 INF: Z Motor: Settle wait time = 2324 ms, measure time = 105 ms (allowed 150 ms), total time = 2429 ms 17-03-17 19:10:44.738 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:44.788 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2590 ms 17-03-17 19:10:44.788 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:44.788 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.35009765625, Z-position -0.129413612191727. ---------- 17-03-17 19:10:44.788 -07 000000610 INF: Cycle 22 Tile 16 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:44.788 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28094, sync = True, waitForSettling = True) 17-03-17 19:10:44.788 -07 000000610 INF: Z Motor: Moving to -0.128606 mm, started at -0.129414 mm, distance = 0.81 um 17-03-17 19:10:44.788 -07 000000610 INF: FPGA: Xmit ZDACW 28094\n [Z Motor] 17-03-17 19:10:44.788 -07 000000593 INF: FPGA: Recv ZDACW 17-03-17 19:10:44.798 -07 000000610 INF: FPGA: 'ZDACW 28094' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:10:44.798 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:44.798 -07 000000561 INF: FPGA: Recv ZDACR 28094 17-03-17 19:10:44.808 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.808 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:44.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.958 -07 000000448 INF: FPGA: Recv ZSGSRD 29312 17-03-17 19:10:44.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:44.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.968 -07 000000482 INF: FPGA: Recv ZSGSRD 29310 17-03-17 19:10:44.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.978 -07 000000561 INF: FPGA: Recv ZSGSRD 29308 17-03-17 19:10:44.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.988 -07 000000482 INF: FPGA: Recv ZSGSRD 29298 17-03-17 19:10:44.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:44.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:44.998 -07 000000382 INF: FPGA: Recv ZSGSRD 29310 17-03-17 19:10:45.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:45.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:45.008 -07 000000569 INF: FPGA: Recv ZSGSRD 29312 17-03-17 19:10:45.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:45.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:45.018 -07 000000569 INF: FPGA: Recv ZSGSRD 29304 17-03-17 19:10:45.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:45.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:45.028 -07 000000593 INF: FPGA: Recv ZSGSRD 29306 17-03-17 19:10:45.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:45.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:45.038 -07 000000382 INF: FPGA: Recv ZSGSRD 29309 17-03-17 19:10:45.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:45.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:45.048 -07 000000561 INF: FPGA: Recv ZSGSRD 29309 17-03-17 19:10:45.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:45.058 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:45.058 -07 000000382 INF: FPGA: Recv ZPIEZORD 24958 17-03-17 19:10:45.068 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:45.068 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.287 V. Piezo Error = -9.6 V. 17-03-17 19:10:45.068 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29308 (-127.8 uncal um), Error = 0.8 uncal um, Median = 29309 (-127.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29298 (-127.8 uncal um), Max = 29312 (-127.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-17 19:10:45.068 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29308, posNoise = 4, negNoise = 10 17-03-17 19:10:45.068 -07 000000610 INF: Z Motor: After move to -0.128606, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:45.068 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-17 19:10:45.068 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:45.068 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:45.068 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:45.068 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:45.068 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:45.068 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:45.068 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:45.068 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:45.068 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-17 19:10:45.068 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:45.068 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-17 19:10:45.068 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:45.078 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-17 19:10:45.078 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:45.078 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:10:45.078 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:45.088 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms. 17-03-17 19:10:45.088 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms. 17-03-17 19:10:45.088 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms. 17-03-17 19:10:45.088 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-17 19:10:45.088 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 28271 150\n [Camera] 17-03-17 19:10:45.288 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:45.688 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:45.688 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:45.688 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:45.688 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:45.688 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:45.688 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:45.688 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:45.688 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-17 19:10:45.698 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:45.698 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) start. 17-03-17 19:10:45.878 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28271 783 17-03-17 19:10:46.028 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP turning grn on 934 17-03-17 19:10:46.088 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 392 ms. 17-03-17 19:10:46.088 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-17 19:10:46.088 -07 000000478 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:46.088 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) end. Duration was 391 ms. 17-03-17 19:10:46.088 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-17 19:10:46.088 -07 000000623 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:46.088 -07 000000478 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:46.088 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-17 19:10:46.098 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:46.098 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms. 17-03-17 19:10:46.218 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:46.218 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:46.218 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:46.228 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:46.228 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:46.228 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:46.228 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:46.228 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-17 19:10:46.228 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:46.228 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-17 19:10:46.408 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:10:46.408 -07 000000462 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:46.408 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 28271 150' command took 2 ms to send, 1319 ms to get response, and 1323 ms overall 17-03-17 19:10:46.418 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.129176 17-03-17 19:10:46.418 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.12918 mm 17-03-17 19:10:46.418 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:46.418 -07 000000478 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True) 17-03-17 19:10:46.418 -07 000000478 INF: Y Motor: Moving to 73.1926 mm, started at 72.3501 mm, delta = 0.8425 mm 17-03-17 19:10:46.418 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:46.418 -07 000000382 INF: Z Motor: Entering MoveAbsStepped (DAC = 28218, sync = True, waitForSettling = False) 17-03-17 19:10:46.418 -07 000000382 INF: Z Motor: Moving to -0.129174 mm, started at -0.128604 mm, distance = -0.57 um 17-03-17 19:10:46.418 -07 000000482 INF: FPGA: Recv YRDPOS 148173 17-03-17 19:10:46.428 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:10:46.428 -07 000000478 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:46.428 -07 000000478 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:46.428 -07 000000478 INF: Y Motor: Moving 1348 steps-26 17-03-17 19:10:46.428 -07 000000382 INF: FPGA: Xmit ZDACW 28218\n [Z Motor] 17-03-17 19:10:46.428 -07 000000561 INF: FPGA: Recv ZDACW 17-03-17 19:10:46.438 -07 000000382 INF: FPGA: 'ZDACW 28218' command took 1 ms to send, 0 ms to get response, and 15 ms overall 17-03-17 19:10:46.438 -07 000000382 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:46.438 -07 000000448 INF: FPGA: Recv ZDACR 28218 17-03-17 19:10:46.448 -07 000000478 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:46.448 -07 000000382 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:46.448 -07 000000382 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet)) 17-03-17 19:10:46.618 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 391 ms. 17-03-17 19:10:46.618 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-17 19:10:46.618 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:46.618 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 396 ms. 17-03-17 19:10:46.618 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-17 19:10:46.618 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:46.628 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:46.628 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:46.628 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms. 17-03-17 19:10:46.628 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms. 17-03-17 19:10:46.658 -07 000000593 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:46.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:46.818 -07 000000618 INF: FPGA: Recv YMVTILE 17-03-17 19:10:46.818 -07 000000478 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-17 19:10:46.858 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:46.858 -07 000000569 INF: FPGA: Recv YRDPOS 149866 17-03-17 19:10:46.868 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:46.868 -07 000000478 INF: Y Motor: Encoder = 149866 = motor step 117082.8 = 73.1768 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:46.868 -07 000000478 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm) 17-03-17 19:10:46.868 -07 000000478 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.122 mm/sec 17-03-17 19:10:47.818 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:47.818 -07 000000382 INF: FPGA: Recv YRDPOS 149866 17-03-17 19:10:47.828 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:47.828 -07 000000478 INF: Y Motor: Encoder = 149866 = motor step 117082.8 = 73.1768 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:47.848 -07 000000478 INF: Y Motor: After move to 73.192604, error = -0.015846, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:47.848 -07 000000478 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm) 17-03-17 19:10:47.848 -07 000000478 INF: Y Motor: Moved to 73.1768 after 1427 ms (table move) 17-03-17 19:10:47.848 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129174 mm (DAC = 28218) 17-03-17 19:10:47.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:47.848 -07 000000478 INF: FPGA: Recv ZSGSRD 29397 17-03-17 19:10:47.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-17 19:10:47.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:47.858 -07 000000462 INF: FPGA: Recv ZSGSRD 29393 17-03-17 19:10:47.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:47.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:47.868 -07 000000569 INF: FPGA: Recv ZSGSRD 29395 17-03-17 19:10:47.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:47.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:47.878 -07 000000462 INF: FPGA: Recv ZSGSRD 29391 17-03-17 19:10:47.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:47.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:47.888 -07 000000569 INF: FPGA: Recv ZSGSRD 29403 17-03-17 19:10:47.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:47.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:47.898 -07 000000478 INF: FPGA: Recv ZSGSRD 29403 17-03-17 19:10:47.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:47.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:47.908 -07 000000569 INF: FPGA: Recv ZSGSRD 29397 17-03-17 19:10:47.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:47.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:47.918 -07 000000478 INF: FPGA: Recv ZSGSRD 29398 17-03-17 19:10:47.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:47.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:47.928 -07 000000482 INF: FPGA: Recv ZSGSRD 29400 17-03-17 19:10:47.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:10:47.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:47.938 -07 000000593 INF: FPGA: Recv ZSGSRD 29390 17-03-17 19:10:47.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:47.948 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:47.948 -07 000000382 INF: FPGA: Recv ZPIEZORD 25113 17-03-17 19:10:47.958 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:47.958 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.306 V. Piezo Error = -9.4 V. 17-03-17 19:10:47.958 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.2 um, Read 10 ADC samples: Avg = 29397 (-128.4 uncal um), Error = 0.8 uncal um, Median = 29397 (-128.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29390 (-128.4 uncal um), Max = 29403 (-128.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-17 19:10:47.958 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29397, posNoise = 6, negNoise = 7 17-03-17 19:10:47.958 -07 000000610 INF: Z Motor: After move to -0.129174, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:47.958 -07 000000610 INF: Z Motor: Settle wait time = 1429 ms, measure time = 107 ms (allowed 150 ms), total time = 1536 ms 17-03-17 19:10:47.958 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:48.008 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1588 ms 17-03-17 19:10:48.008 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:48.008 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.1767578125, Z-position -0.129175916342482. ---------- 17-03-17 19:10:48.008 -07 000000610 INF: Cycle 22 Tile 17 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:48.008 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28042, sync = True, waitForSettling = True) 17-03-17 19:10:48.008 -07 000000610 INF: Z Motor: Moving to -0.128368 mm, started at -0.129176 mm, distance = 0.81 um 17-03-17 19:10:48.008 -07 000000610 INF: FPGA: Xmit ZDACW 28042\n [Z Motor] 17-03-17 19:10:48.008 -07 000000618 INF: FPGA: Recv ZDACW 17-03-17 19:10:48.018 -07 000000610 INF: FPGA: 'ZDACW 28042' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:10:48.018 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:48.018 -07 000000462 INF: FPGA: Recv ZDACR 28042 17-03-17 19:10:48.028 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.028 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:48.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:48.178 -07 000000462 INF: FPGA: Recv ZSGSRD 29270 17-03-17 19:10:48.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:48.188 -07 000000462 INF: FPGA: Recv ZSGSRD 29272 17-03-17 19:10:48.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:48.198 -07 000000478 INF: FPGA: Recv ZSGSRD 29279 17-03-17 19:10:48.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:48.208 -07 000000478 INF: FPGA: Recv ZSGSRD 29271 17-03-17 19:10:48.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:48.218 -07 000000478 INF: FPGA: Recv ZSGSRD 29273 17-03-17 19:10:48.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:48.228 -07 000000478 INF: FPGA: Recv ZSGSRD 29267 17-03-17 19:10:48.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:48.238 -07 000000623 INF: FPGA: Recv ZSGSRD 29265 17-03-17 19:10:48.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:48.248 -07 000000623 INF: FPGA: Recv ZSGSRD 29269 17-03-17 19:10:48.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:48.258 -07 000000623 INF: FPGA: Recv ZSGSRD 29267 17-03-17 19:10:48.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:48.268 -07 000000623 INF: FPGA: Recv ZSGSRD 29269 17-03-17 19:10:48.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.278 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:48.278 -07 000000623 INF: FPGA: Recv ZPIEZORD 24970 17-03-17 19:10:48.288 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:48.288 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.279 V. Piezo Error = -9.4 V. 17-03-17 19:10:48.288 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.4 um, Read 10 ADC samples: Avg = 29270 (-127.6 uncal um), Error = 0.8 uncal um, Median = 29270 (-127.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29265 (-127.6 uncal um), Max = 29279 (-127.6 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:10:48.288 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29270, posNoise = 9, negNoise = 5 17-03-17 19:10:48.288 -07 000000610 INF: Z Motor: After move to -0.128368, error = 0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:48.288 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms) 17-03-17 19:10:48.288 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:48.288 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:48.288 -07 000000478 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:48.288 -07 000000623 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:48.288 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:48.288 -07 000000593 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:48.288 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:48.288 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:48.288 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-17 19:10:48.288 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:48.288 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:48.288 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:48.298 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:10:48.298 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:48.298 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-17 19:10:48.298 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:48.298 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-17 19:10:48.298 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 12 ms. 17-03-17 19:10:48.308 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-17 19:10:48.308 -07 000000593 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-17 19:10:48.308 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 28218 150\n [Camera] 17-03-17 19:10:48.508 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:48.908 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:48.908 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:48.908 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:48.908 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:48.908 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:48.908 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:48.908 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:48.908 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start. 17-03-17 19:10:48.908 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:48.908 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start. 17-03-17 19:10:49.098 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28218 783 17-03-17 19:10:49.248 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:49.278 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.994908, 17-03-17 19:10:49.288 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 379 ms. 17-03-17 19:10:49.288 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-17 19:10:49.288 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:49.288 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 382 ms. 17-03-17 19:10:49.288 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-17 19:10:49.288 -07 000000482 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:49.298 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:49.298 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:49.298 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-17 19:10:49.308 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms. 17-03-17 19:10:49.438 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:49.438 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:49.438 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:49.558 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:49.558 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:49.558 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:49.558 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:49.558 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-17 19:10:49.558 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:49.558 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:10:49.628 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP 1318 17-03-17 19:10:49.628 -07 000000382 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:49.628 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 28218 150' command took 2 ms to send, 1317 ms to get response, and 1325 ms overall 17-03-17 19:10:49.628 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128806 17-03-17 19:10:49.638 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12881 mm 17-03-17 19:10:49.638 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:49.638 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 28138, sync = True, waitForSettling = False) 17-03-17 19:10:49.638 -07 000000561 INF: Z Motor: Moving to -0.128808 mm, started at -0.128360 mm, distance = -0.45 um 17-03-17 19:10:49.638 -07 000000478 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True) 17-03-17 19:10:49.638 -07 000000561 INF: FPGA: Xmit ZDACW 28138\n [Z Motor] 17-03-17 19:10:49.638 -07 000000478 INF: Y Motor: Moving to 74.0226 mm, started at 73.1768 mm, delta = 0.8458 mm 17-03-17 19:10:49.638 -07 000000462 INF: FPGA: Recv ZDACW 17-03-17 19:10:49.648 -07 000000561 INF: FPGA: 'ZDACW 28138' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-17 19:10:49.648 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:49.648 -07 000000448 INF: FPGA: Recv ZDACR 28138 17-03-17 19:10:49.658 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:49.658 -07 000000561 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet)) 17-03-17 19:10:49.658 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:49.658 -07 000000448 INF: FPGA: Recv YRDPOS 149866 17-03-17 19:10:49.668 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall 17-03-17 19:10:49.668 -07 000000478 INF: Y Motor: Encoder = 149866 = motor step 117082.8 = 73.1768 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:49.668 -07 000000478 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:49.668 -07 000000478 INF: Y Motor: Moving 1353 steps-32 17-03-17 19:10:49.668 -07 000000478 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:49.958 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 397 ms. 17-03-17 19:10:49.958 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-17 19:10:49.958 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:49.958 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 400 ms. 17-03-17 19:10:49.958 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-17 19:10:49.958 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:49.968 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:49.968 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-17 19:10:49.968 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 526 ms. 17-03-17 19:10:49.968 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms. 17-03-17 19:10:50.038 -07 000000382 INF: FPGA: Recv YMVTILE 17-03-17 19:10:50.038 -07 000000478 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall 17-03-17 19:10:50.068 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:50.078 -07 000000482 INF: FPGA: Recv YRDPOS 151569 17-03-17 19:10:50.078 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 5 ms overall 17-03-17 19:10:50.078 -07 000000478 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:50.078 -07 000000478 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm) 17-03-17 19:10:50.078 -07 000000478 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.846 mm, average velocity = 2.238 mm/sec 17-03-17 19:10:51.028 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:51.028 -07 000000382 INF: FPGA: Recv YRDPOS 151570 17-03-17 19:10:51.038 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:51.038 -07 000000478 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:51.048 -07 000000478 INF: Y Motor: After move to 74.022606, error = -0.013817, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:51.048 -07 000000478 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm) 17-03-17 19:10:51.048 -07 000000478 INF: Y Motor: Moved to 74.0088 after 1412 ms (table move) 17-03-17 19:10:51.048 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128808 mm (DAC = 28138) 17-03-17 19:10:51.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.058 -07 000000448 INF: FPGA: Recv ZSGSRD 29349 17-03-17 19:10:51.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-17 19:10:51.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.058 -07 000000482 INF: FPGA: Recv ZSGSRD 29340 17-03-17 19:10:51.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.068 -07 000000561 INF: FPGA: Recv ZSGSRD 29335 17-03-17 19:10:51.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.078 -07 000000618 INF: FPGA: Recv ZSGSRD 29345 17-03-17 19:10:51.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.088 -07 000000462 INF: FPGA: Recv ZSGSRD 29337 17-03-17 19:10:51.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.098 -07 000000382 INF: FPGA: Recv ZSGSRD 29346 17-03-17 19:10:51.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.108 -07 000000448 INF: FPGA: Recv ZSGSRD 29343 17-03-17 19:10:51.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.118 -07 000000478 INF: FPGA: Recv ZSGSRD 29341 17-03-17 19:10:51.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.128 -07 000000561 INF: FPGA: Recv ZSGSRD 29342 17-03-17 19:10:51.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.138 -07 000000382 INF: FPGA: Recv ZSGSRD 29339 17-03-17 19:10:51.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.148 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:51.148 -07 000000448 INF: FPGA: Recv ZPIEZORD 25055 17-03-17 19:10:51.158 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.158 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.294 V. Piezo Error = -9.4 V. 17-03-17 19:10:51.158 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29342 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29342 (-128.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29335 (-128.0 uncal um), Max = 29349 (-128.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-17 19:10:51.158 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29342, posNoise = 7, negNoise = 7 17-03-17 19:10:51.158 -07 000000610 INF: Z Motor: After move to -0.128808, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:51.158 -07 000000610 INF: Z Motor: Settle wait time = 1414 ms, measure time = 103 ms (allowed 150 ms), total time = 1517 ms 17-03-17 19:10:51.158 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:51.208 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1569 ms 17-03-17 19:10:51.208 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:51.208 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0087890625, Z-position -0.128822584674685. ---------- 17-03-17 19:10:51.208 -07 000000610 INF: Cycle 22 Tile 18 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:51.208 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27961, sync = True, waitForSettling = True) 17-03-17 19:10:51.208 -07 000000610 INF: Z Motor: Moving to -0.127997 mm, started at -0.128823 mm, distance = 0.83 um 17-03-17 19:10:51.208 -07 000000610 INF: FPGA: Xmit ZDACW 27961\n [Z Motor] 17-03-17 19:10:51.208 -07 000000462 INF: FPGA: Recv ZDACW 17-03-17 19:10:51.218 -07 000000610 INF: FPGA: 'ZDACW 27961' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-17 19:10:51.218 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:51.218 -07 000000482 INF: FPGA: Recv ZDACR 27961 17-03-17 19:10:51.228 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.228 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:51.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.378 -07 000000448 INF: FPGA: Recv ZSGSRD 29217 17-03-17 19:10:51.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:51.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.388 -07 000000482 INF: FPGA: Recv ZSGSRD 29213 17-03-17 19:10:51.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.398 -07 000000462 INF: FPGA: Recv ZSGSRD 29213 17-03-17 19:10:51.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.418 -07 000000561 INF: FPGA: Recv ZSGSRD 29219 17-03-17 19:10:51.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:10:51.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.428 -07 000000478 INF: FPGA: Recv ZSGSRD 29219 17-03-17 19:10:51.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.438 -07 000000561 INF: FPGA: Recv ZSGSRD 29211 17-03-17 19:10:51.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.448 -07 000000448 INF: FPGA: Recv ZSGSRD 29209 17-03-17 19:10:51.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.458 -07 000000482 INF: FPGA: Recv ZSGSRD 29216 17-03-17 19:10:51.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.468 -07 000000382 INF: FPGA: Recv ZSGSRD 29214 17-03-17 19:10:51.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:51.478 -07 000000478 INF: FPGA: Recv ZSGSRD 29213 17-03-17 19:10:51.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.488 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:51.488 -07 000000618 INF: FPGA: Recv ZPIEZORD 24862 17-03-17 19:10:51.498 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:51.498 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.267 V. Piezo Error = -9.6 V. 17-03-17 19:10:51.498 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.0 um, Read 10 ADC samples: Avg = 29214 (-127.2 uncal um), Error = 0.8 uncal um, Median = 29214 (-127.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29209 (-127.2 uncal um), Max = 29219 (-127.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-17 19:10:51.498 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29214, posNoise = 5, negNoise = 5 17-03-17 19:10:51.498 -07 000000610 INF: Z Motor: After move to -0.127997, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:51.498 -07 000000610 INF: Z Motor: MoveAbsStepped took 284 ms) 17-03-17 19:10:51.498 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:51.498 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:51.498 -07 000000482 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:51.498 -07 000000478 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:51.498 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:51.498 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:51.498 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:51.498 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:51.498 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:51.498 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:51.498 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:51.498 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:51.508 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:10:51.508 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:51.508 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-17 19:10:51.508 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:51.518 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms. 17-03-17 19:10:51.518 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-17 19:10:51.518 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 17 ms. 17-03-17 19:10:51.518 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms. 17-03-17 19:10:51.528 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 28138 150\n [Camera] 17-03-17 19:10:51.658 -07 000000593 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:51.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:51.728 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:52.128 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:52.128 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:52.128 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:52.128 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:52.128 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:52.128 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:52.128 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:52.128 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start. 17-03-17 19:10:52.128 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:52.128 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-17 19:10:52.318 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28138 783 17-03-17 19:10:52.468 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:52.508 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 377 ms. 17-03-17 19:10:52.508 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-17 19:10:52.508 -07 000000382 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:52.508 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:52.508 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-17 19:10:52.628 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 500 ms. 17-03-17 19:10:52.628 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 500 ms. 17-03-17 19:10:52.628 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:52.638 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:52.638 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 515 ms. 17-03-17 19:10:52.658 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:52.658 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:52.658 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:52.658 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:52.658 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:52.658 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:52.658 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:52.658 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start. 17-03-17 19:10:52.668 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:52.668 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start. 17-03-17 19:10:52.848 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1316 17-03-17 19:10:52.848 -07 000000429 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:52.848 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 28138 150' command took 2 ms to send, 1315 ms to get response, and 1323 ms overall 17-03-17 19:10:52.848 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-17 19:10:52.848 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.0087890625, Z-Position -0.12800028552054. ------ 17-03-17 19:10:52.858 -07 000000478 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:10:52.858 -07 000000462 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.13430 mm 17-03-17 19:10:52.858 -07 000000462 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-17 19:10:52.858 -07 000000482 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:10:52.858 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True) 17-03-17 19:10:52.858 -07 000000429 INF: Y Motor: Moving to 74.8526 mm, started at 74.0088 mm, delta = 0.8438 mm 17-03-17 19:10:52.858 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 29338, sync = True, waitForSettling = False) 17-03-17 19:10:52.858 -07 000000424 INF: Z Motor: Moving to -0.134301 mm, started at -0.128000 mm, distance = -6.30 um 17-03-17 19:10:52.868 -07 000000478 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:10:52.868 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:52.868 -07 000000561 INF: FPGA: Recv YRDPOS 151570 17-03-17 19:10:52.878 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-17 19:10:52.878 -07 000000424 INF: FPGA: Xmit ZDACW 29338\n [Z Motor] 17-03-17 19:10:52.878 -07 000000429 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:52.878 -07 000000429 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-17 19:10:52.878 -07 000000429 INF: Y Motor: Moving 1350 steps-29 17-03-17 19:10:52.878 -07 000000561 INF: FPGA: Recv ZDACW 17-03-17 19:10:52.888 -07 000000478 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-17 19:10:52.888 -07 000000424 INF: FPGA: 'ZDACW 29338' command took 0 ms to send, 0 ms to get response, and 20 ms overall 17-03-17 19:10:52.898 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-17 19:10:52.908 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:52.908 -07 000000476 INF: FPGA: Recv ZDACR 29338 17-03-17 19:10:52.918 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-17 19:10:52.918 -07 000000424 INF: Z Motor: MoveAbsStepped took 50 ms (did NOT wait for settling yet)) 17-03-17 19:10:53.048 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 381 ms. 17-03-17 19:10:53.048 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-17 19:10:53.048 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:53.048 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 380 ms. 17-03-17 19:10:53.048 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-17 19:10:53.048 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:53.048 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:53.048 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-17 19:10:53.048 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-17 19:10:53.058 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-17 19:10:53.088 -07 000000382 INF: FPGA: Recv FOCMRRFOC 17-03-17 19:10:53.088 -07 000000478 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall 17-03-17 19:10:53.278 -07 000000478 INF: FPGA: Recv YMVTILE 17-03-17 19:10:53.278 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 400 ms overall 17-03-17 19:10:53.298 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:53.298 -07 000000448 INF: FPGA: Recv YRDPOS 153257 17-03-17 19:10:53.308 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:10:53.308 -07 000000429 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:53.308 -07 000000429 INF: Y Motor: Position error before settling (table move) = -41 encoder counts (-0.020 mm) 17-03-17 19:10:53.308 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.844 mm, average velocity = 2.110 mm/sec 17-03-17 19:10:54.258 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-17 19:10:54.258 -07 000000382 INF: FPGA: Recv YRDPOS 153258 17-03-17 19:10:54.268 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:54.268 -07 000000429 INF: Y Motor: Encoder = 153258 = motor step 119732.8 = 74.8330 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-17 19:10:54.278 -07 000000429 INF: Y Motor: After move to 74.852608, error = -0.019600, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm 17-03-17 19:10:54.278 -07 000000429 INF: Y Motor: Position error after settling (table move) = -40 encoder counts (-0.020 mm), Delta during settling = 1 counts (0.000 mm) 17-03-17 19:10:54.278 -07 000000429 INF: Y Motor: Moved to 74.8330 after 1416 ms (table move) 17-03-17 19:10:54.278 -07 000000462 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134301 mm (DAC = 29338) 17-03-17 19:10:54.278 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:54.288 -07 000000429 INF: FPGA: Recv ZSGSRD 30198 17-03-17 19:10:54.288 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-17 19:10:54.288 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:54.288 -07 000000448 INF: FPGA: Recv ZSGSRD 30201 17-03-17 19:10:54.298 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-17 19:10:54.298 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:54.298 -07 000000448 INF: FPGA: Recv ZSGSRD 30190 17-03-17 19:10:54.308 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:54.308 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:54.308 -07 000000448 INF: FPGA: Recv ZSGSRD 30186 17-03-17 19:10:54.318 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:54.328 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:54.328 -07 000000593 INF: FPGA: Recv ZSGSRD 30198 17-03-17 19:10:54.338 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-17 19:10:54.338 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:54.338 -07 000000593 INF: FPGA: Recv ZSGSRD 30198 17-03-17 19:10:54.348 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:54.348 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:54.348 -07 000000448 INF: FPGA: Recv ZSGSRD 30197 17-03-17 19:10:54.358 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:54.358 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:54.358 -07 000000448 INF: FPGA: Recv ZSGSRD 30199 17-03-17 19:10:54.368 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:54.368 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:54.368 -07 000000448 INF: FPGA: Recv ZSGSRD 30200 17-03-17 19:10:54.378 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:54.378 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:54.378 -07 000000448 INF: FPGA: Recv ZSGSRD 30195 17-03-17 19:10:54.388 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:54.388 -07 000000462 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:54.388 -07 000000448 INF: FPGA: Recv ZPIEZORD 26174 17-03-17 19:10:54.398 -07 000000462 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:54.398 -07 000000462 INF: Z Motor: Piezo is near 35.9 V (nominally 0 to 100 V), expect near 44.8 V, since DAC is at 4.477 V. Piezo Error = -8.9 V. 17-03-17 19:10:54.398 -07 000000462 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.3 um, Read 10 ADC samples: Avg = 30196 (-133.5 uncal um), Error = 0.8 uncal um, Median = 30198 (-133.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30186 (-133.5 uncal um), Max = 30201 (-133.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-17 19:10:54.398 -07 000000462 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30196, posNoise = 5, negNoise = 10 17-03-17 19:10:54.398 -07 000000462 INF: Z Motor: After move to -0.134301, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:54.398 -07 000000462 INF: Z Motor: Settle wait time = 1418 ms, measure time = 113 ms (allowed 150 ms), total time = 1531 ms 17-03-17 19:10:54.398 -07 000000462 INF: Z Motor: Waiting extra 37 ms after reading position to reach expected total of 150 ms 17-03-17 19:10:54.438 -07 000000462 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1576 ms 17-03-17 19:10:54.438 -07 000000462 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-17 19:10:54.438 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:54.438 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:54.438 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:54.438 -07 000000448 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:54.438 -07 000000462 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-17 19:10:54.438 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:54.438 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-17 19:10:54.438 -07 000000462 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-17 19:10:54.448 -07 000000462 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-17 19:10:54.448 -07 000000462 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-17 19:10:54.458 -07 000000462 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms. 17-03-17 19:10:54.458 -07 000000462 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms. 17-03-17 19:10:54.458 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera] 17-03-17 19:10:54.498 -07 000000593 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-17 19:10:54.638 -07 000000482 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.983999, 17-03-17 19:10:54.698 -07 000000424 INF: FPGA: Recv @CAMSNAP img rdy 240 17-03-17 19:10:54.698 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240 17-03-17 19:10:54.708 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-17 19:10:54.708 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) start. 17-03-17 19:10:54.738 -07 000000593 INF: FPGA: Recv @CAMSNAP 280 17-03-17 19:10:54.738 -07 000000618 INF: FPGA: Recv CAMSNAP 17-03-17 19:10:54.738 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 285 ms overall 17-03-17 19:10:54.828 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) end. Duration was 123 ms. 17-03-17 19:10:54.828 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:54.828 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-17 19:10:54.828 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 126 ms. 17-03-17 19:10:54.938 -07 000000448 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-17 19:10:54.938 -07 000000424 INF: Autofocus start 17-03-17 19:10:54.938 -07 000000424 INF: MeasureProfile start 17-03-17 19:10:54.938 -07 000000593 INF: FPGA: Recv FOCMRRCUR 17-03-17 19:10:54.948 -07 000000448 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-17 19:10:54.948 -07 000000448 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-17 19:10:54.948 -07 000000424 INF: MeasureProfile done 17-03-17 19:10:54.948 -07 000000424 INF: X=32 Z correction [um]=0.1299841 17-03-17 19:10:54.948 -07 000000424 INF: Autofocus finished 17-03-17 19:10:55.148 -07 000000462 INF: FPGA: Recv FOCMRRIMG 17-03-17 19:10:55.148 -07 000000448 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-17 19:10:55.148 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.8330078125, Z-position -0.134308861843749. ---------- 17-03-17 19:10:55.148 -07 000000610 INF: Cycle 22 Tile 19 Exposure Settings A 398 G 191 T 191 C 398 17-03-17 19:10:55.158 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27879, sync = True, waitForSettling = True) 17-03-17 19:10:55.158 -07 000000610 INF: Z Motor: Moving to -0.127622 mm, started at -0.134309 mm, distance = 6.69 um 17-03-17 19:10:55.158 -07 000000610 INF: FPGA: Xmit ZDACW 27879\n [Z Motor] 17-03-17 19:10:55.158 -07 000000482 INF: FPGA: Recv ZDACW 17-03-17 19:10:55.168 -07 000000610 INF: FPGA: 'ZDACW 27879' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-17 19:10:55.168 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-17 19:10:55.168 -07 000000448 INF: FPGA: Recv ZDACR 27879 17-03-17 19:10:55.178 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:55.178 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-17 19:10:55.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:55.328 -07 000000482 INF: FPGA: Recv ZSGSRD 29159 17-03-17 19:10:55.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-17 19:10:55.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:55.338 -07 000000462 INF: FPGA: Recv ZSGSRD 29153 17-03-17 19:10:55.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:55.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:55.348 -07 000000424 INF: FPGA: Recv ZSGSRD 29154 17-03-17 19:10:55.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:55.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:55.358 -07 000000462 INF: FPGA: Recv ZSGSRD 29155 17-03-17 19:10:55.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:55.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:55.368 -07 000000424 INF: FPGA: Recv ZSGSRD 29157 17-03-17 19:10:55.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:55.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:55.378 -07 000000462 INF: FPGA: Recv ZSGSRD 29161 17-03-17 19:10:55.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:55.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:55.388 -07 000000448 INF: FPGA: Recv ZSGSRD 29155 17-03-17 19:10:55.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:55.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:55.398 -07 000000593 INF: FPGA: Recv ZSGSRD 29157 17-03-17 19:10:55.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:55.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:55.408 -07 000000482 INF: FPGA: Recv ZSGSRD 29154 17-03-17 19:10:55.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:55.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-17 19:10:55.418 -07 000000618 INF: FPGA: Recv ZSGSRD 29159 17-03-17 19:10:55.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:55.428 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-17 19:10:55.428 -07 000000424 INF: FPGA: Recv ZPIEZORD 24800 17-03-17 19:10:55.438 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-17 19:10:55.438 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.254 V. Piezo Error = -9.6 V. 17-03-17 19:10:55.438 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.6 um, Read 10 ADC samples: Avg = 29156 (-126.9 uncal um), Error = 0.8 uncal um, Median = 29156 (-126.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29153 (-126.8 uncal um), Max = 29161 (-126.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-17 19:10:55.438 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29156, posNoise = 5, negNoise = 3 17-03-17 19:10:55.438 -07 000000610 INF: Z Motor: After move to -0.127622, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-17 19:10:55.438 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-17 19:10:55.438 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-17 19:10:55.438 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-17 19:10:55.438 -07 000000448 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-17 19:10:55.438 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-17 19:10:55.438 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-17 19:10:55.438 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-17 19:10:55.438 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-17 19:10:55.438 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-17 19:10:55.438 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-17 19:10:55.438 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-17 19:10:55.438 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-17 19:10:55.438 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-17 19:10:55.448 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-17 19:10:55.448 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-17 19:10:55.448 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-17 19:10:55.448 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-17 19:10:55.458 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-17 19:10:55.458 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-17 19:10:55.458 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-17 19:10:55.458 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-17 19:10:55.458 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 398 398 191 191 28056 150\n [Camera] 17-03-17 19:10:55.658 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-17 19:10:56.058 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 590 17-03-17 19:10:56.058 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 590 17-03-17 19:10:56.058 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:56.058 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 590 17-03-17 19:10:56.068 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 590 17-03-17 19:10:56.068 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:56.068 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:56.068 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start. 17-03-17 19:10:56.068 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:56.068 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start. 17-03-17 19:10:56.248 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28056 783 17-03-17 19:10:56.398 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 933 17-03-17 19:10:56.438 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 372 ms. 17-03-17 19:10:56.438 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-17 19:10:56.438 -07 000000448 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:56.438 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 370 ms. 17-03-17 19:10:56.438 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms. 17-03-17 19:10:56.438 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:56.448 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:56.448 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-17 19:10:56.448 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:56.448 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-17 19:10:56.598 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1124 17-03-17 19:10:56.598 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1124 17-03-17 19:10:56.598 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-17 19:10:56.598 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-17 19:10:56.598 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-17 19:10:56.598 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1124 17-03-17 19:10:56.598 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1124 17-03-17 19:10:56.598 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-17 19:10:56.598 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-17 19:10:56.598 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) start. 17-03-17 19:10:56.658 -07 000000541 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-17 19:10:56.658 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 21. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=9, R2=10, Total=19. Bubbles this run: R1=256, R2=273, Total=529. Warn if over 250 bubbles per interval. 17-03-17 19:10:56.788 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP 1317 17-03-17 19:10:56.788 -07 000000448 INF: FPGA: Recv CAMDBLSNAP 17-03-17 19:10:56.788 -07 000000610 INF: FPGA: 'CAMDBLSNAP 398 398 191 191 28056 150' command took 2 ms to send, 1312 ms to get response, and 1323 ms overall 17-03-17 19:10:56.988 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 1406045800, 0x0, 418435064) end. Duration was 394 ms. 17-03-17 19:10:56.988 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-17 19:10:56.998 -07 000000593 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:56.998 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 396 ms. 17-03-17 19:10:56.998 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-17 19:10:56.998 -07 000000462 INF: Camera: CopyActivePixFullImage start. 17-03-17 19:10:56.998 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:56.998 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-17 19:10:56.998 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-17 19:10:56.998 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start. 17-03-17 19:10:57.008 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms. 17-03-17 19:10:57.038 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 41 ms. 17-03-17 19:10:57.038 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start. 17-03-17 19:10:57.088 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms. 17-03-17 19:10:57.108 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles. 17-03-17 19:10:57.108 -07 000000610 INF: Imaging Cycle 22: ScanTilesCommand Cycle 22 time end. Duration was 145413 ms. 17-03-17 19:10:57.108 -07 000000610 INF: =================== Cycle #22 =================== 17-03-17 19:10:57.108 -07 000000610 INF: =================== =================== 17-03-17 19:10:57.128 -07 000000610 INF: Y-Drift Offset assigned 0.002126916. 17-03-17 19:10:57.138 -07 000000623 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED] 17-03-17 19:10:57.138 -07 000000382 INF: FPGA: Recv EXLED1ADCR 28 17-03-17 19:10:57.148 -07 000000623 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 34 ms overall 17-03-17 19:10:57.148 -07 000000623 INF: GreenLED: Using Green data: Photodiode ADC 28 --> 0.0 mW (old method), or 2.1 mW (new method). Difference = 2.1 mW 17-03-17 19:10:57.148 -07 000000623 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 22, FrontChillerTemperature: 3.983999, FrontChillerHeatSinkTemperature: 0.404063, AmbientTemperature: 18.92772, FlowCellCompartmentTemperature: 21.99692, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.80233, GreenLEDSensorTemperature: 25.00629, PhotodiodePowerAdcGreen: 28, PhotodiodePowerMwGreen: 2.10942