17-03-17 17:34:49.208 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:34:49.218 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-17 17:34:49.218 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8335 mm, delta = 0.5471 mm
17-03-17 17:34:49.218 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:34:49.218 -07 000000478 INF: FPGA: Recv YRDPOS 153259
17-03-17 17:34:49.228 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:34:49.228 -07 000000610 INF: Y Motor: Encoder = 153259 = motor step 119733.6 = 74.8335 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:34:49.228 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-17 17:34:49.228 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-17 17:34:49.228 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-17 17:34:49.338 -07 000000618 INF: FPGA: Recv YMVTO 154378 876
17-03-17 17:34:49.338 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 109 ms to get response, and 118 ms overall
17-03-17 17:34:49.338 -07 000000610 INF: Y Motor: Position error before settling = -1 encoder counts (0.000 mm)
17-03-17 17:34:49.338 -07 000000610 INF: Y Motor: To move from 74.833 to 75.381 (0.547 mm) should take 875 steps, but required 876 steps (0.548 mm). Slippage = 0.001 mm (0.00%).
17-03-17 17:34:49.338 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 118 ms, distance = 0.547 mm, average velocity = 4.636 mm/sec
17-03-17 17:34:51.508 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:34:51.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:34:52.338 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:34:52.338 -07 000000627 INF: FPGA: Recv YRDPOS 154388
17-03-17 17:34:52.348 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:34:52.348 -07 000000610 INF: Y Motor: Encoder = 154388 = motor step 120615.6 = 75.3848 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:34:52.358 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.004186, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:34:52.358 -07 000000610 INF: Y Motor: Position error after settling = 9 encoder counts (0.004 mm), Delta during settling = 10 counts (0.005 mm)
17-03-17 17:34:52.358 -07 000000610 INF: Y Motor: Moved to 75.3848 after 3144 ms
17-03-17 17:34:52.368 -07 000000610 INF: =================== Cycle #3, Flow Cell Temp 60° ===================
17-03-17 17:34:52.368 -07 000000610 INF: =================== Cycle #3, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-17 17:34:52.368 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-17 17:34:52.368 -07 000000631 INF: FPGA: Recv TEC2TEMP 
17-03-17 17:34:52.378 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 2 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:34:52.378 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 17:34:52.378 -07 000000478 INF: FlowCellTempControl: Setting temperature polling rate to 00:00:01 ms
17-03-17 17:34:52.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.38557,  FlowCellCompartmentTemperature: 21.99981, AmbientTemperature: 18.62355
17-03-17 17:34:52.378 -07 000000631 INF: FPGA: Recv TEC2EN 
17-03-17 17:34:52.388 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:34:52.388 -07 000000610 INF: =================== Cycle #3, Flow Cell Temp 60° ===================
17-03-17 17:34:52.388 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:34:52.388 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 17:34:52.388 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:34:52.418 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-17 17:34:52.418 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-17 17:34:52.418 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 17:34:52.718 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 17:34:52.738 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-17 17:34:52.738 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-17 17:34:52.788 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:34:52.808 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 17:34:52.808 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 17:34:52.908 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:34:52.908 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-17 17:34:52.908 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:34:52.938 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 17:34:52.938 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 17:34:52.938 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 17:34:53.068 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-17 17:34:53.108 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:34:53.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.33266,  FlowCellCompartmentTemperature: 21.98528, AmbientTemperature: 18.61114
17-03-17 17:34:54.088 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.049392,
17-03-17 17:34:54.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.27448,  FlowCellCompartmentTemperature: 28.96433, AmbientTemperature: 18.61114
17-03-17 17:34:55.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.27448,  FlowCellCompartmentTemperature: 28.96433, AmbientTemperature: 18.60488
17-03-17 17:34:56.238 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:34:56.268 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:34:56.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.01942,  FlowCellCompartmentTemperature: 40.62278, AmbientTemperature: 18.60488
17-03-17 17:34:56.508 -07 000000623 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:34:56.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:34:56.688 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:34:56.718 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:34:57.138 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:34:57.168 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:34:57.168 -07 000000610 INF: LanePump: Waited 4060 ms for pump motion to complete
17-03-17 17:34:57.168 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:34:57.298 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:34:57.328 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 17:34:57.328 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 17:34:57.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.82933,  FlowCellCompartmentTemperature: 48.6352, AmbientTemperature: 18.60178
17-03-17 17:34:57.458 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:34:57.488 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 17:34:57.488 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 17:34:57.488 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 17:34:57.618 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 17:34:57.648 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:34:58.078 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:34:58.108 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:34:58.108 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 17:34:58.108 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:34:58.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.69948,  FlowCellCompartmentTemperature: 55.51109, AmbientTemperature: 18.60178
17-03-17 17:34:59.328 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 17:34:59.328 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-17 17:34:59.328 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:34:59.348 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 17:34:59.348 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-17 17:34:59.348 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-17 17:34:59.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.69948,  FlowCellCompartmentTemperature: 55.51109, AmbientTemperature: 18.59972
17-03-17 17:34:59.448 -07 000000382 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.0344,
17-03-17 17:34:59.478 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 17:34:59.498 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-17 17:34:59.498 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-17 17:34:59.548 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:34:59.568 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-17 17:34:59.568 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 17:34:59.668 -07 000000610 INF: =================== Cycle #3, Pumping Reagent CMS (4) ===================
17-03-17 17:34:59.668 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 17:34:59.668 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:34:59.698 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 17:34:59.698 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 17:34:59.698 -07 000000610 INF: =================== Cycle #3, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-17 17:34:59.828 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 17:34:59.868 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:00.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.62714,  FlowCellCompartmentTemperature: 59.77736, AmbientTemperature: 18.59972
17-03-17 17:35:01.308 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:01.338 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:01.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.65753,  FlowCellCompartmentTemperature: 60.04396, AmbientTemperature: 18.59659
17-03-17 17:35:01.508 -07 000000476 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:01.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:01.758 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:01.788 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:01.788 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 17:35:01.788 -07 000000610 INF: =================== Cycle #3, Pumping Reagent CMS (4) ===================
17-03-17 17:35:01.918 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:01.948 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 17:35:01.948 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 17:35:02.078 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:02.108 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 17:35:02.108 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 17:35:02.108 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 17:35:02.238 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 17:35:02.268 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:02.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.72883,  FlowCellCompartmentTemperature: 59.68824, AmbientTemperature: 18.59659
17-03-17 17:35:02.698 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:02.728 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:02.728 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 17:35:02.728 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:35:03.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.72883,  FlowCellCompartmentTemperature: 59.68824, AmbientTemperature: 18.58827
17-03-17 17:35:03.948 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 17:35:03.948 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 17:35:03.948 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:35:03.968 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-17 17:35:03.968 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-17 17:35:03.968 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-17 17:35:04.118 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 17:35:04.138 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-17 17:35:04.138 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-17 17:35:04.188 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:35:04.208 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 17:35:04.208 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 17:35:04.308 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:35:04.308 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 17:35:04.308 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:04.338 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 17:35:04.338 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 17:35:04.338 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 17:35:04.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.81364,  FlowCellCompartmentTemperature: 59.85415, AmbientTemperature: 18.58621
17-03-17 17:35:04.468 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 17:35:04.508 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:04.808 -07 000000459 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.033041,
17-03-17 17:35:05.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.88056,  FlowCellCompartmentTemperature: 60.0974, AmbientTemperature: 18.58518
17-03-17 17:35:05.378 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:05.408 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:05.408 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-17 17:35:05.408 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:35:05.538 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:05.568 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 17:35:05.568 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 17:35:05.698 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:05.728 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 17:35:05.728 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 17:35:05.728 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 17:35:05.858 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 17:35:05.888 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:06.318 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:06.348 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:06.348 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 17:35:06.348 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:35:06.348 -07 000000486 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 17:35:06.348 -07 000000442 INF: WaitCommand(10000) start
17-03-17 17:35:06.348 -07 000000486 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 17:35:06.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.92549,  FlowCellCompartmentTemperature: 60.16079, AmbientTemperature: 18.58518
17-03-17 17:35:06.508 -07 000000409 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:06.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:07.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.92549,  FlowCellCompartmentTemperature: 60.16079, AmbientTemperature: 18.58415
17-03-17 17:35:07.568 -07 000000486 INF: AsyncDelayTimer waited 1215ms
17-03-17 17:35:07.568 -07 000000486 INF: LanePump: Xmit /1?\r
17-03-17 17:35:07.598 -07 000000486 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 17:35:07.598 -07 000000486 INF: LanePump: Current Position of Pump is: 1110
17-03-17 17:35:07.728 -07 000000486 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 17:35:07.768 -07 000000486 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:08.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 17.98606,  FlowCellCompartmentTemperature: 60.15829, AmbientTemperature: 18.57896
17-03-17 17:35:09.298 -07 000000486 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:09.328 -07 000000486 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:09.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.03924,  FlowCellCompartmentTemperature: 60.15829, AmbientTemperature: 18.57999
17-03-17 17:35:09.748 -07 000000486 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:10.268 -07 000000486 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:10.268 -07 000000486 INF: LanePump: Waited 2499 ms for pump motion to complete
17-03-17 17:35:10.268 -07 000000486 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 17:35:10.268 -07 000000486 INF: ===================  ===================
17-03-17 17:35:10.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.03924,  FlowCellCompartmentTemperature: 60.15829, AmbientTemperature: 18.57999
17-03-17 17:35:10.568 -07 000000631 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.014009,
17-03-17 17:35:11.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.12261,  FlowCellCompartmentTemperature: 60.14589, AmbientTemperature: 18.57999
17-03-17 17:35:11.508 -07 000000459 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:11.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:12.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.12261,  FlowCellCompartmentTemperature: 60.14589, AmbientTemperature: 18.57273
17-03-17 17:35:13.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.17153,  FlowCellCompartmentTemperature: 60.12724, AmbientTemperature: 18.57067
17-03-17 17:35:14.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.21212,  FlowCellCompartmentTemperature: 60.10859, AmbientTemperature: 18.57273
17-03-17 17:35:15.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.21212,  FlowCellCompartmentTemperature: 60.10859, AmbientTemperature: 18.57273
17-03-17 17:35:15.998 -07 000000409 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.031682,
17-03-17 17:35:16.358 -07 000000442 INF: WaitCommand(10000) end
17-03-17 17:35:16.358 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:35:16.358 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-17 17:35:16.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.25162,  FlowCellCompartmentTemperature: 60.08746, AmbientTemperature: 18.5717
17-03-17 17:35:16.398 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:16.428 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 17:35:16.428 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 17:35:16.428 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 17:35:16.508 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:16.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:16.558 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-17 17:35:16.598 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:17.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.30462,  FlowCellCompartmentTemperature: 60.0713, AmbientTemperature: 18.56857
17-03-17 17:35:18.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.34093,  FlowCellCompartmentTemperature: 60.0502, AmbientTemperature: 18.56857
17-03-17 17:35:19.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.34093,  FlowCellCompartmentTemperature: 60.0502, AmbientTemperature: 18.56857
17-03-17 17:35:20.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.3866,  FlowCellCompartmentTemperature: 59.98935, AmbientTemperature: 18.56445
17-03-17 17:35:21.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.42186,  FlowCellCompartmentTemperature: 59.95089, AmbientTemperature: 18.56338
17-03-17 17:35:21.438 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.0344,
17-03-17 17:35:21.508 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:21.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:22.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.45813,  FlowCellCompartmentTemperature: 59.96207, AmbientTemperature: 18.56338
17-03-17 17:35:22.728 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:22.758 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:23.178 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:23.208 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:23.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.45813,  FlowCellCompartmentTemperature: 59.96207, AmbientTemperature: 18.56445
17-03-17 17:35:23.628 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:23.658 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:24.078 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:24.108 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:24.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.48197,  FlowCellCompartmentTemperature: 59.98189, AmbientTemperature: 18.56338
17-03-17 17:35:24.528 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:24.558 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:24.558 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-17 17:35:24.558 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:35:24.688 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:24.718 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 17:35:24.718 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 17:35:24.848 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:24.878 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 17:35:24.878 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 17:35:24.878 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 17:35:25.008 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 17:35:25.038 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:25.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.52028,  FlowCellCompartmentTemperature: 59.9968, AmbientTemperature: 18.56029
17-03-17 17:35:25.468 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:25.498 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:25.498 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 17:35:25.498 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:35:26.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.55134,  FlowCellCompartmentTemperature: 60.01046, AmbientTemperature: 18.56029
17-03-17 17:35:26.508 -07 000000442 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:26.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:26.718 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-17 17:35:26.718 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-17 17:35:26.718 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:35:26.738 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 17:35:26.738 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-17 17:35:26.738 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-17 17:35:26.878 -07 000000631 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.037119,
17-03-17 17:35:26.948 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 17:35:26.968 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-17 17:35:26.968 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-17 17:35:27.018 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:35:27.038 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-17 17:35:27.038 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 17:35:27.138 -07 000000610 INF: =================== Cycle #3, Pumping Reagent IMT (1) ===================
17-03-17 17:35:27.138 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 17:35:27.138 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:27.168 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 17:35:27.168 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 17:35:27.168 -07 000000610 INF: =================== Cycle #3, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-17 17:35:27.298 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 17:35:27.338 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:27.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.55134,  FlowCellCompartmentTemperature: 60.01046, AmbientTemperature: 18.56132
17-03-17 17:35:28.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.58133,  FlowCellCompartmentTemperature: 60.04647, AmbientTemperature: 18.56132
17-03-17 17:35:28.778 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:28.808 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:29.228 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:29.258 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:29.258 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 17:35:29.258 -07 000000610 INF: =================== Cycle #3, Pumping Reagent IMT (1) ===================
17-03-17 17:35:29.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.60412,  FlowCellCompartmentTemperature: 60.06012, AmbientTemperature: 18.56132
17-03-17 17:35:29.388 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:29.418 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 17:35:29.418 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 17:35:29.548 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:29.578 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 17:35:29.578 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 17:35:29.578 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 17:35:29.708 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 17:35:29.738 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:30.168 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:30.198 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:30.198 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 17:35:30.198 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:35:30.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.63718,  FlowCellCompartmentTemperature: 60.0117, AmbientTemperature: 18.56132
17-03-17 17:35:31.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.63718,  FlowCellCompartmentTemperature: 60.0117, AmbientTemperature: 18.55716
17-03-17 17:35:31.418 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 17:35:31.418 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 17:35:31.418 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:35:31.438 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-17 17:35:31.438 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-17 17:35:31.438 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 17:35:31.508 -07 000000459 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:31.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:31.668 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 17:35:31.688 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-17 17:35:31.688 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-17 17:35:31.738 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:35:31.758 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 17:35:31.758 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 17:35:31.858 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:35:31.858 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 17:35:31.858 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:31.888 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 17:35:31.888 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 17:35:31.888 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 17:35:32.018 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 17:35:32.058 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:35:32.318 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.03576,
17-03-17 17:35:32.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.66819,  FlowCellCompartmentTemperature: 60.02162, AmbientTemperature: 18.56029
17-03-17 17:35:32.928 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:32.958 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:32.958 -07 000000610 INF: LanePump: Waited 900 ms for pump motion to complete
17-03-17 17:35:32.958 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:35:33.088 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:33.118 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 17:35:33.118 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 17:35:33.248 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:35:33.278 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 17:35:33.278 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 17:35:33.278 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 17:35:33.378 -07 000000478 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 60, FlowCellHeatSinkTemperature: 18.68164,  FlowCellCompartmentTemperature: 60.04396, AmbientTemperature: 18.55613
17-03-17 17:35:33.408 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 17:35:33.438 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:33.868 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:35:33.898 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:35:33.898 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 17:35:33.898 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:35:33.898 -07 000000610 INF: =================== Cycle #3, Flow Cell Temp 65° ===================
17-03-17 17:35:33.898 -07 000000610 INF: =================== Cycle #3, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-17 17:35:33.898 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-17 17:35:33.898 -07 000000459 INF: FPGA: Recv TEC2TEMP 
17-03-17 17:35:33.908 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:35:33.908 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 17:35:33.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.68164,  FlowCellCompartmentTemperature: 60.04396, AmbientTemperature: 18.55613
17-03-17 17:35:33.908 -07 000000442 INF: FPGA: Recv TEC2EN 
17-03-17 17:35:33.918 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:35:33.918 -07 000000610 INF: =================== Cycle #3, Flow Cell Temp 65° ===================
17-03-17 17:35:33.918 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:35:33.918 -07 000000610 INF: WaitCommand(30000) start
17-03-17 17:35:33.978 -07 000000478 INF: FlowCellTempControl: Setting temperature polling rate to 00:00:05 ms
17-03-17 17:35:34.908 -07 000000627 INF: FlowCellTempControl: Setting temperature polling rate to 00:00:01 ms
17-03-17 17:35:34.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.71154,  FlowCellCompartmentTemperature: 60.41108, AmbientTemperature: 18.55716
17-03-17 17:35:35.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.71154,  FlowCellCompartmentTemperature: 60.41108, AmbientTemperature: 18.55716
17-03-17 17:35:36.508 -07 000000478 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:36.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:36.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.71154,  FlowCellCompartmentTemperature: 60.41108, AmbientTemperature: 18.55716
17-03-17 17:35:37.678 -07 000000442 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.050752,
17-03-17 17:35:37.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.71154,  FlowCellCompartmentTemperature: 60.41108, AmbientTemperature: 18.55716
17-03-17 17:35:38.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.71154,  FlowCellCompartmentTemperature: 60.41108, AmbientTemperature: 18.55716
17-03-17 17:35:39.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.74252,  FlowCellCompartmentTemperature: 64.4917, AmbientTemperature: 18.55716
17-03-17 17:35:40.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.74252,  FlowCellCompartmentTemperature: 64.4917, AmbientTemperature: 18.56132
17-03-17 17:35:41.508 -07 000000442 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:41.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:41.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.78792,  FlowCellCompartmentTemperature: 64.68083, AmbientTemperature: 18.56029
17-03-17 17:35:42.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.82916,  FlowCellCompartmentTemperature: 64.81905, AmbientTemperature: 18.56235
17-03-17 17:35:43.118 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.03576,
17-03-17 17:35:43.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.86521,  FlowCellCompartmentTemperature: 64.88628, AmbientTemperature: 18.56235
17-03-17 17:35:44.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.86521,  FlowCellCompartmentTemperature: 64.88628, AmbientTemperature: 18.56235
17-03-17 17:35:45.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.90437,  FlowCellCompartmentTemperature: 64.92849, AmbientTemperature: 18.56029
17-03-17 17:35:46.508 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:46.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:46.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.93726,  FlowCellCompartmentTemperature: 64.95888, AmbientTemperature: 18.56235
17-03-17 17:35:47.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.93726,  FlowCellCompartmentTemperature: 64.95888, AmbientTemperature: 18.56235
17-03-17 17:35:48.558 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.038479,
17-03-17 17:35:48.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 18.9733,  FlowCellCompartmentTemperature: 64.98, AmbientTemperature: 18.56029
17-03-17 17:35:49.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.01133,  FlowCellCompartmentTemperature: 64.99319, AmbientTemperature: 18.55926
17-03-17 17:35:50.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.04627,  FlowCellCompartmentTemperature: 65.00375, AmbientTemperature: 18.55926
17-03-17 17:35:51.508 -07 000000631 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:51.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:51.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.04627,  FlowCellCompartmentTemperature: 65.00375, AmbientTemperature: 18.56235
17-03-17 17:35:52.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.08019,  FlowCellCompartmentTemperature: 65.01962, AmbientTemperature: 18.5696
17-03-17 17:35:53.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.11408,  FlowCellCompartmentTemperature: 65.01565, AmbientTemperature: 18.56445
17-03-17 17:35:53.998 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.019446,
17-03-17 17:35:54.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.14793,  FlowCellCompartmentTemperature: 65.01434, AmbientTemperature: 18.56445
17-03-17 17:35:55.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.14793,  FlowCellCompartmentTemperature: 65.01434, AmbientTemperature: 18.5696
17-03-17 17:35:56.508 -07 000000478 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:35:56.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:35:56.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.18382,  FlowCellCompartmentTemperature: 65.01565, AmbientTemperature: 18.56857
17-03-17 17:35:57.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.21458,  FlowCellCompartmentTemperature: 65.01962, AmbientTemperature: 18.5696
17-03-17 17:35:58.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.24225,  FlowCellCompartmentTemperature: 65.01301, AmbientTemperature: 18.5696
17-03-17 17:35:59.438 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.042558,
17-03-17 17:35:59.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.24225,  FlowCellCompartmentTemperature: 65.01301, AmbientTemperature: 18.56857
17-03-17 17:36:00.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.27299,  FlowCellCompartmentTemperature: 65.01036, AmbientTemperature: 18.5696
17-03-17 17:36:01.508 -07 000000631 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:36:01.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:36:01.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.30783,  FlowCellCompartmentTemperature: 65.00906, AmbientTemperature: 18.57067
17-03-17 17:36:02.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.3303,  FlowCellCompartmentTemperature: 65.00639, AmbientTemperature: 18.57067
17-03-17 17:36:03.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.3303,  FlowCellCompartmentTemperature: 65.00639, AmbientTemperature: 18.57586
17-03-17 17:36:03.928 -07 000000610 INF: WaitCommand(30000) end
17-03-17 17:36:03.928 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:36:03.928 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-17 17:36:04.028 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:04.058 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 17:36:04.058 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 17:36:04.058 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 17:36:04.188 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-17 17:36:04.228 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:36:04.768 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:04.798 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:04.798 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete
17-03-17 17:36:04.798 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:36:04.878 -07 000000631 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.024884,
17-03-17 17:36:04.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.36512,  FlowCellCompartmentTemperature: 65.00639, AmbientTemperature: 18.57792
17-03-17 17:36:04.928 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:04.958 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 17:36:04.958 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-17 17:36:05.088 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:05.118 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 17:36:05.118 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-17 17:36:05.118 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 17:36:05.248 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 17:36:05.278 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:05.708 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:05.738 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:05.738 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 17:36:05.738 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:36:05.738 -07 000000459 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 17:36:05.738 -07 000000631 INF: WaitCommand(30000) start
17-03-17 17:36:05.738 -07 000000459 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 17:36:05.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.38556,  FlowCellCompartmentTemperature: 65.00639, AmbientTemperature: 18.57792
17-03-17 17:36:06.508 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:36:06.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:36:06.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.38556,  FlowCellCompartmentTemperature: 65.00639, AmbientTemperature: 18.57586
17-03-17 17:36:06.958 -07 000000459 INF: AsyncDelayTimer waited 1216ms
17-03-17 17:36:06.958 -07 000000459 INF: LanePump: Xmit /1?\r
17-03-17 17:36:06.988 -07 000000459 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 17:36:06.988 -07 000000459 INF: LanePump: Current Position of Pump is: 1920
17-03-17 17:36:07.118 -07 000000459 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 17:36:07.158 -07 000000459 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:36:07.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.41318,  FlowCellCompartmentTemperature: 65.00906, AmbientTemperature: 18.5769
17-03-17 17:36:08.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.41318,  FlowCellCompartmentTemperature: 65.00906, AmbientTemperature: 18.5769
17-03-17 17:36:09.498 -07 000000459 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:09.528 -07 000000459 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:36:09.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.45611,  FlowCellCompartmentTemperature: 64.99979, AmbientTemperature: 18.57896
17-03-17 17:36:09.948 -07 000000459 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:09.978 -07 000000459 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:09.978 -07 000000459 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-17 17:36:09.978 -07 000000459 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 17:36:09.978 -07 000000459 INF: ===================  ===================
17-03-17 17:36:10.238 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.0344,
17-03-17 17:36:10.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.47549,  FlowCellCompartmentTemperature: 65.00506, AmbientTemperature: 18.57999
17-03-17 17:36:11.508 -07 000000442 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:36:11.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:36:11.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.47549,  FlowCellCompartmentTemperature: 65.00506, AmbientTemperature: 18.57999
17-03-17 17:36:12.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.50105,  FlowCellCompartmentTemperature: 65.00773, AmbientTemperature: 18.58209
17-03-17 17:36:13.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.52247,  FlowCellCompartmentTemperature: 65.00773, AmbientTemperature: 18.58728
17-03-17 17:36:14.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.54493,  FlowCellCompartmentTemperature: 65.00773, AmbientTemperature: 18.58728
17-03-17 17:36:15.598 -07 000000459 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.0344,
17-03-17 17:36:15.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.54493,  FlowCellCompartmentTemperature: 65.00773, AmbientTemperature: 18.58728
17-03-17 17:36:16.508 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:36:16.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:36:16.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.56328,  FlowCellCompartmentTemperature: 65.00244, AmbientTemperature: 18.58728
17-03-17 17:36:17.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.58574,  FlowCellCompartmentTemperature: 65.01434, AmbientTemperature: 18.58827
17-03-17 17:36:18.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.60713,  FlowCellCompartmentTemperature: 65.00375, AmbientTemperature: 18.58827
17-03-17 17:36:19.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.60713,  FlowCellCompartmentTemperature: 65.00375, AmbientTemperature: 18.58934
17-03-17 17:36:20.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.62653,  FlowCellCompartmentTemperature: 65.00506, AmbientTemperature: 18.5914
17-03-17 17:36:20.958 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.043918,
17-03-17 17:36:21.508 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:36:21.508 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:36:21.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.64589,  FlowCellCompartmentTemperature: 65.00375, AmbientTemperature: 18.5914
17-03-17 17:36:22.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.66422,  FlowCellCompartmentTemperature: 65.00244, AmbientTemperature: 18.5914
17-03-17 17:36:23.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.66422,  FlowCellCompartmentTemperature: 65.00244, AmbientTemperature: 18.59247
17-03-17 17:36:24.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.68354,  FlowCellCompartmentTemperature: 65.00244, AmbientTemperature: 18.59453
17-03-17 17:36:25.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.6958,  FlowCellCompartmentTemperature: 65.00506, AmbientTemperature: 18.59453
17-03-17 17:36:26.318 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.053471,
17-03-17 17:36:26.508 -07 000000442 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:36:26.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:36:26.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.71717,  FlowCellCompartmentTemperature: 65.00906, AmbientTemperature: 18.59453
17-03-17 17:36:27.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.71717,  FlowCellCompartmentTemperature: 65.00906, AmbientTemperature: 18.59869
17-03-17 17:36:28.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.72839,  FlowCellCompartmentTemperature: 65.00244, AmbientTemperature: 18.59453
17-03-17 17:36:29.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.74365,  FlowCellCompartmentTemperature: 65.00375, AmbientTemperature: 18.59453
17-03-17 17:36:30.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.74365,  FlowCellCompartmentTemperature: 65.00375, AmbientTemperature: 18.59659
17-03-17 17:36:31.508 -07 000000482 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:36:31.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:36:31.678 -07 000000459 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.019446,
17-03-17 17:36:31.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.75687,  FlowCellCompartmentTemperature: 65.00506, AmbientTemperature: 18.60075
17-03-17 17:36:32.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.77517,  FlowCellCompartmentTemperature: 65.00906, AmbientTemperature: 18.60075
17-03-17 17:36:33.908 -07 000000627 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 65, FlowCellHeatSinkTemperature: 19.7894,  FlowCellCompartmentTemperature: 65.01167, AmbientTemperature: 18.60075
17-03-17 17:36:34.908 -07 000000627 INF: FlowCellTempControl: Setting temperature polling rate to 00:00:05 ms
17-03-17 17:36:35.748 -07 000000631 INF: WaitCommand(30000) end
17-03-17 17:36:35.748 -07 000000610 INF: =================== Cycle #3, Flow Cell Temp 22° ===================
17-03-17 17:36:35.748 -07 000000610 INF: =================== Cycle #3, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-17 17:36:35.748 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-17 17:36:35.748 -07 000000459 INF: FPGA: Recv TEC2TEMP 
17-03-17 17:36:35.758 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:36:35.758 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 17:36:35.758 -07 000000561 INF: FPGA: Recv TEC2EN 
17-03-17 17:36:35.758 -07 000000442 INF: FlowCellTempControl: Setting temperature polling rate to 00:00:01 ms
17-03-17 17:36:35.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 19.79959,  FlowCellCompartmentTemperature: 64.99979, AmbientTemperature: 18.60488
17-03-17 17:36:35.768 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:36:35.768 -07 000000610 INF: =================== Cycle #3, Flow Cell Temp 22° ===================
17-03-17 17:36:35.768 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:36:35.768 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:36:35.768 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-17 17:36:35.768 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:35.798 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 17:36:35.798 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 17:36:35.798 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 17:36:35.928 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-17 17:36:35.968 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:36:36.508 -07 000000482 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:36:36.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=29, R2=35, Total=64. Warn if over 250 bubbles per interval.
17-03-17 17:36:36.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 19.79959,  FlowCellCompartmentTemperature: 64.99979, AmbientTemperature: 18.60488
17-03-17 17:36:37.038 -07 000000486 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.031682,
17-03-17 17:36:37.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 19.79959,  FlowCellCompartmentTemperature: 64.99979, AmbientTemperature: 18.60488
17-03-17 17:36:38.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 19.79959,  FlowCellCompartmentTemperature: 64.99979, AmbientTemperature: 18.60488
17-03-17 17:36:39.098 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:39.128 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:36:39.548 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:39.578 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:36:39.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 19.79959,  FlowCellCompartmentTemperature: 64.99979, AmbientTemperature: 18.60488
17-03-17 17:36:39.998 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:40.028 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:40.028 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-17 17:36:40.028 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:36:40.158 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:40.188 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 17:36:40.188 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 17:36:40.318 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:40.348 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 17:36:40.348 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 17:36:40.348 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 17:36:40.478 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 17:36:40.508 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:40.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 21.52631,  FlowCellCompartmentTemperature: 48.6031, AmbientTemperature: 18.60698
17-03-17 17:36:40.938 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:40.968 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:40.968 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 17:36:40.968 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:36:41.508 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 2
17-03-17 17:36:41.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=2, R2=2, Total=4. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=31, R2=37, Total=68. Warn if over 250 bubbles per interval.
17-03-17 17:36:41.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 21.52631,  FlowCellCompartmentTemperature: 48.6031, AmbientTemperature: 18.60698
17-03-17 17:36:42.188 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 17:36:42.188 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-17 17:36:42.188 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:36:42.208 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 17:36:42.208 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-17 17:36:42.208 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-17 17:36:42.358 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 17:36:42.378 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-17 17:36:42.378 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-17 17:36:42.398 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.016692,
17-03-17 17:36:42.428 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:36:42.448 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-17 17:36:42.448 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 17:36:42.548 -07 000000610 INF: =================== Cycle #3, Pumping Reagent USM (2) ===================
17-03-17 17:36:42.548 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 17:36:42.548 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:42.578 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 17:36:42.578 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 17:36:42.578 -07 000000610 INF: =================== Cycle #3, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-17 17:36:42.708 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 17:36:42.748 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:36:42.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.2399,  FlowCellCompartmentTemperature: 44.2338, AmbientTemperature: 18.61629
17-03-17 17:36:43.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.86458,  FlowCellCompartmentTemperature: 40.37634, AmbientTemperature: 18.61839
17-03-17 17:36:44.188 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:44.218 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:36:44.638 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:44.668 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:44.668 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 17:36:44.668 -07 000000610 INF: =================== Cycle #3, Pumping Reagent USM (2) ===================
17-03-17 17:36:44.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.38582,  FlowCellCompartmentTemperature: 36.93882, AmbientTemperature: 18.61839
17-03-17 17:36:44.798 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:44.828 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 17:36:44.828 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 17:36:44.958 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:44.988 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 17:36:44.988 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 17:36:44.988 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 17:36:45.118 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 17:36:45.148 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:45.578 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:45.608 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:45.608 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 17:36:45.608 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:36:45.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.38582,  FlowCellCompartmentTemperature: 36.93882, AmbientTemperature: 18.62462
17-03-17 17:36:46.518 -07 000000409 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:36:46.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=31, R2=37, Total=68. Warn if over 250 bubbles per interval.
17-03-17 17:36:46.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.83545,  FlowCellCompartmentTemperature: 33.8144, AmbientTemperature: 18.63707
17-03-17 17:36:46.828 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-17 17:36:46.828 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 17:36:46.828 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:36:46.848 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-17 17:36:46.848 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-17 17:36:46.848 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 17:36:46.998 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 17:36:47.018 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-17 17:36:47.018 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-17 17:36:47.068 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:36:47.088 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 17:36:47.088 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 17:36:47.188 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:36:47.188 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 17:36:47.188 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:47.218 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 17:36:47.218 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 17:36:47.218 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 17:36:47.348 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 17:36:47.388 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:36:47.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 24.2319,  FlowCellCompartmentTemperature: 30.97135, AmbientTemperature: 18.64741
17-03-17 17:36:47.838 -07 000000631 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.024884,
17-03-17 17:36:48.258 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:48.288 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:48.288 -07 000000610 INF: LanePump: Waited 898 ms for pump motion to complete
17-03-17 17:36:48.288 -07 000000610 INF: =================== Cycle #3, Pumping Reagent PR2 (3) ===================
17-03-17 17:36:48.418 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:48.448 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 17:36:48.448 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 17:36:48.578 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 17:36:48.608 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 17:36:48.608 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 17:36:48.608 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 17:36:48.738 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 17:36:48.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 24.57295,  FlowCellCompartmentTemperature: 28.36918, AmbientTemperature: 18.64741
17-03-17 17:36:48.768 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:49.198 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:49.228 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:49.228 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 17:36:49.228 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:36:49.228 -07 000000482 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 17:36:49.228 -07 000000409 INF: WaitCommand(10000) start
17-03-17 17:36:49.228 -07 000000482 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 17:36:49.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 24.57295,  FlowCellCompartmentTemperature: 28.36918, AmbientTemperature: 18.65879
17-03-17 17:36:50.448 -07 000000482 INF: AsyncDelayTimer waited 1216ms
17-03-17 17:36:50.448 -07 000000482 INF: LanePump: Xmit /1?\r
17-03-17 17:36:50.478 -07 000000482 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 17:36:50.478 -07 000000482 INF: LanePump: Current Position of Pump is: 1110
17-03-17 17:36:50.608 -07 000000482 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 17:36:50.648 -07 000000482 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:36:50.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 24.88801,  FlowCellCompartmentTemperature: 26.00362, AmbientTemperature: 18.66811
17-03-17 17:36:51.518 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 1
17-03-17 17:36:51.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=1, R2=2, Total=3. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:36:51.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 25.16283,  FlowCellCompartmentTemperature: 23.83221, AmbientTemperature: 18.68263
17-03-17 17:36:52.178 -07 000000482 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:52.208 -07 000000482 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 17:36:52.628 -07 000000482 INF: LanePump: Xmit /1Q\r
17-03-17 17:36:52.658 -07 000000482 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 17:36:52.658 -07 000000482 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-17 17:36:52.658 -07 000000482 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 17:36:52.658 -07 000000482 INF: ===================  ===================
17-03-17 17:36:52.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 25.41981,  FlowCellCompartmentTemperature: 21.85716, AmbientTemperature: 18.68263
17-03-17 17:36:53.278 -07 000000486 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.027603,
17-03-17 17:36:53.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 25.41981,  FlowCellCompartmentTemperature: 21.85716, AmbientTemperature: 18.69302
17-03-17 17:36:54.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 25.58544,  FlowCellCompartmentTemperature: 21.73165, AmbientTemperature: 18.71059
17-03-17 17:36:55.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 25.43708,  FlowCellCompartmentTemperature: 22.53884, AmbientTemperature: 18.71991
17-03-17 17:36:56.518 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:36:56.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:36:56.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 25.20602,  FlowCellCompartmentTemperature: 21.92273, AmbientTemperature: 18.71991
17-03-17 17:36:57.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 25.20602,  FlowCellCompartmentTemperature: 21.92273, AmbientTemperature: 18.73649
17-03-17 17:36:58.718 -07 000000482 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.016692,
17-03-17 17:36:58.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 25.00147,  FlowCellCompartmentTemperature: 22.24045, AmbientTemperature: 18.74582
17-03-17 17:36:59.238 -07 000000409 INF: WaitCommand(10000) end
17-03-17 17:36:59.238 -07 000000610 INF: =================== Cycle #3, Imaging ===================
17-03-17 17:36:59.238 -07 000000610 INF: Imaging Cycle 3: ScanTilesCommand Cycle 3 time start.
17-03-17 17:36:59.238 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-17 17:36:59.238 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:36:59.268 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 17:36:59.268 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-17 17:36:59.268 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-17 17:36:59.568 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 17:36:59.588 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-17 17:36:59.588 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-17 17:36:59.638 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 17:36:59.658 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-17 17:36:59.658 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:36:59.658 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:36:59.658 -07 000000448 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-17 17:36:59.658 -07 000000448 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:36:59.658 -07 000000448 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-17 17:36:59.658 -07 000000486 INF: FPGA: Recv EXLED1ON 
17-03-17 17:36:59.668 -07 000000448 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 17:36:59.668 -07 000000448 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-17 17:36:59.668 -07 000000409 INF: FPGA: Recv EXLED1ADCR 23121
17-03-17 17:36:59.678 -07 000000448 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:36:59.678 -07 000000448 INF: RedLED: Using Red data: Photodiode ADC 23121 --> 7.4 mW (old method), or 204.9 mW (new method). Difference = 197.5 mW
17-03-17 17:36:59.678 -07 000000448 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-17 17:36:59.678 -07 000000486 INF: FPGA: Recv EXLED1OFF 
17-03-17 17:36:59.688 -07 000000448 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:36:59.688 -07 000000448 INF: RedLED: LED was on for 20 ms
17-03-17 17:36:59.688 -07 000000448 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 23 ms.
17-03-17 17:36:59.688 -07 000000448 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-17 17:36:59.688 -07 000000448 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:36:59.688 -07 000000448 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-17 17:36:59.688 -07 000000618 INF: FPGA: Recv EXLED2ON 
17-03-17 17:36:59.698 -07 000000448 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:36:59.698 -07 000000448 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-17 17:36:59.698 -07 000000458 INF: FPGA: Recv EXLED1ADCR 2099
17-03-17 17:36:59.708 -07 000000448 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:36:59.708 -07 000000448 INF: GreenLED: Using Green data: Photodiode ADC 2099 --> 0.9 mW (old method), or 182.4 mW (new method). Difference = 181.5 mW
17-03-17 17:36:59.708 -07 000000448 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-17 17:36:59.708 -07 000000486 INF: FPGA: Recv EXLED2OFF 
17-03-17 17:36:59.718 -07 000000448 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:36:59.718 -07 000000448 INF: GreenLED: LED was on for 19 ms
17-03-17 17:36:59.718 -07 000000448 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-17 17:36:59.718 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-17 17:36:59.718 -07 000000486 INF: FPGA: Recv EMCUR 
17-03-17 17:36:59.728 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:36:59.728 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-17 17:36:59.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 24.78017,  FlowCellCompartmentTemperature: 22.0187, AmbientTemperature: 18.74582
17-03-17 17:37:00.228 -07 000000431 INF: FPGA: Recv EMOUT
17-03-17 17:37:00.228 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-17 17:37:00.228 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-17 17:37:00.228 -07 000000541 INF: FPGA: Recv EMCUR 
17-03-17 17:37:00.238 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:00.238 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:00.238 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.384765625, Z-Position -0.126599807273636. ------
17-03-17 17:37:00.238 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:00.238 -07 000000458 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17789 mm
17-03-17 17:37:00.238 -07 000000458 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:00.238 -07 000000433 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:00.248 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:37:00.248 -07 000000431 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-17 17:37:00.248 -07 000000431 INF: Y Motor: Moving to 59.9126 mm, started at 75.3848 mm, delta = -15.4722 mm
17-03-17 17:37:00.248 -07 000000618 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:00.248 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 38860, sync = True, waitForSettling = False)
17-03-17 17:37:00.248 -07 000000501 INF: Z Motor: Moving to -0.177890 mm, started at -0.126600 mm, distance = -51.29 um
17-03-17 17:37:00.258 -07 000000501 INF: FPGA: Xmit ZDACW 38860\n [Z Motor]
17-03-17 17:37:00.258 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 17:37:00.268 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:00.268 -07 000000501 INF: FPGA: 'ZDACW 38860' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:00.268 -07 000000631 INF: FPGA: Recv YRDPOS 154387
17-03-17 17:37:00.278 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:37:00.278 -07 000000431 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:00.278 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:00.278 -07 000000431 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-17 17:37:00.278 -07 000000431 INF: Y Motor: Moving to 122701 encoder counts
17-03-17 17:37:00.278 -07 000000482 INF: FPGA: Recv ZDACR 38860
17-03-17 17:37:00.288 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:00.288 -07 000000431 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-17 17:37:00.288 -07 000000501 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-17 17:37:00.448 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:00.448 -07 000000618 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:37:00.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 24.78017,  FlowCellCompartmentTemperature: 22.0187, AmbientTemperature: 18.76236
17-03-17 17:37:01.518 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:01.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:01.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 24.59321,  FlowCellCompartmentTemperature: 22.13622, AmbientTemperature: 18.77272
17-03-17 17:37:01.968 -07 000000482 INF: FPGA: Recv YMVTO 122702 24781
17-03-17 17:37:01.968 -07 000000431 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1694 ms overall
17-03-17 17:37:01.968 -07 000000431 INF: Y Motor: Position error before settling = 1 encoder counts (0.000 mm)
17-03-17 17:37:01.968 -07 000000431 INF: Y Motor: To move from 75.384 to 59.913 (-15.472 mm) should take 24755 steps, but required 24781 steps (15.488 mm). Slippage = 0.016 mm (0.00%).
17-03-17 17:37:01.968 -07 000000431 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1694 ms, distance = 15.472 mm, average velocity = 9.134 mm/sec
17-03-17 17:37:02.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 24.40785,  FlowCellCompartmentTemperature: 22.03613, AmbientTemperature: 18.7872
17-03-17 17:37:03.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 24.26868,  FlowCellCompartmentTemperature: 22.07678, AmbientTemperature: 18.7872
17-03-17 17:37:04.158 -07 000000482 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.009895,
17-03-17 17:37:04.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 24.26868,  FlowCellCompartmentTemperature: 22.07678, AmbientTemperature: 18.78927
17-03-17 17:37:04.818 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:04.818 -07 000000482 INF: FPGA: Recv YRDPOS 122698
17-03-17 17:37:04.828 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:04.828 -07 000000431 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:04.838 -07 000000431 INF: Y Motor: After move to 59.912609, error = -0.001476, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:04.838 -07 000000431 INF: Y Motor: Position error after settling = -3 encoder counts (-0.001 mm), Delta during settling = -4 counts (-0.002 mm)
17-03-17 17:37:04.838 -07 000000431 INF: Y Motor: Moved to 59.9111 after 4598 ms
17-03-17 17:37:04.848 -07 000000458 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177890 mm (DAC = 38860)
17-03-17 17:37:04.848 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:04.848 -07 000000424 INF: FPGA: Recv ZSGSRD 36984
17-03-17 17:37:04.858 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:04.858 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:04.858 -07 000000431 INF: FPGA: Recv ZSGSRD 36981
17-03-17 17:37:04.868 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:04.868 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:04.868 -07 000000424 INF: FPGA: Recv ZSGSRD 36980
17-03-17 17:37:04.878 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:04.878 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:04.878 -07 000000631 INF: FPGA: Recv ZSGSRD 36977
17-03-17 17:37:04.888 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:04.898 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:04.898 -07 000000486 INF: FPGA: Recv ZSGSRD 36981
17-03-17 17:37:04.908 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:04.908 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:04.908 -07 000000631 INF: FPGA: Recv ZSGSRD 36987
17-03-17 17:37:04.918 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:04.918 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:04.918 -07 000000482 INF: FPGA: Recv ZSGSRD 36978
17-03-17 17:37:04.928 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:04.928 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:04.928 -07 000000631 INF: FPGA: Recv ZSGSRD 36980
17-03-17 17:37:04.938 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:04.938 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:04.938 -07 000000424 INF: FPGA: Recv ZSGSRD 36985
17-03-17 17:37:04.948 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:04.948 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:04.948 -07 000000631 INF: FPGA: Recv ZSGSRD 36979
17-03-17 17:37:04.958 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:04.958 -07 000000458 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:04.958 -07 000000431 INF: FPGA: Recv ZPIEZORD 33256
17-03-17 17:37:04.968 -07 000000458 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:04.968 -07 000000458 INF: Z Motor: Piezo is near 51.0 V (nominally 0 to 100 V), expect near 59.3 V, since DAC is at 5.930 V. Piezo Error = -8.3 V.
17-03-17 17:37:04.968 -07 000000458 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.9 um, Read 10 ADC samples: Avg = 36981 (-177.0 uncal um), Error = 0.9 uncal um, Median = 36980 (-177.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36977 (-177.0 uncal um), Max = 36987 (-177.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 17:37:04.968 -07 000000458 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36981, posNoise = 6, negNoise = 4
17-03-17 17:37:04.968 -07 000000458 INF: Z Motor: After move to -0.177890, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:04.968 -07 000000458 INF: Z Motor: Settle wait time = 4602 ms, measure time = 117 ms (allowed 150 ms), total time = 4719 ms
17-03-17 17:37:04.968 -07 000000458 INF: Z Motor: Waiting extra 33 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:05.008 -07 000000458 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4764 ms
17-03-17 17:37:05.008 -07 000000458 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:05.008 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:05.008 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:05.008 -07 000000486 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:05.008 -07 000000431 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:05.008 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:05.008 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:05.008 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:05.008 -07 000000431 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-17 17:37:05.038 -07 000000431 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-17 17:37:05.038 -07 000000431 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:05.038 -07 000000431 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-17 17:37:05.038 -07 000000431 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:05.058 -07 000000431 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-17 17:37:05.058 -07 000000431 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms.
17-03-17 17:37:05.058 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:05.098 -07 000000458 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:05.298 -07 000000618 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:05.298 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:05.298 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:05.298 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1051332656, 0x0, 559484976) start.
17-03-17 17:37:05.338 -07 000000631 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:05.338 -07 000000482 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:05.338 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 277 ms to get response, and 285 ms overall
17-03-17 17:37:05.428 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1051332656, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 17:37:05.428 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:05.428 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:37:05.428 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-17 17:37:05.538 -07 000000431 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:05.538 -07 000000458 INF: Image SNR check: start
17-03-17 17:37:05.538 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:05.548 -07 000000431 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:05.548 -07 000000431 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:05.548 -07 000000458 INF: Image SNR check: pass  [peak (Max-Min)=80.07]
17-03-17 17:37:05.548 -07 000000458 INF: Autofocus start
17-03-17 17:37:05.548 -07 000000458 INF: MeasureProfile start
17-03-17 17:37:05.558 -07 000000458 INF: MeasureProfile done
17-03-17 17:37:05.558 -07 000000458 INF: X=160  Z correction [um]=0.7464442
17-03-17 17:37:05.568 -07 000000458 INF: Autofocus finished
17-03-17 17:37:05.748 -07 000000482 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:05.748 -07 000000431 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:37:05.748 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.9111328125, Z-position -0.177897141225597. ----------
17-03-17 17:37:05.748 -07 000000610 INF: Cycle	3	Tile	1	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:05.758 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 24.11574,  FlowCellCompartmentTemperature: 22.05646, AmbientTemperature: 18.79236
17-03-17 17:37:05.758 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37535, sync = True, waitForSettling = True)
17-03-17 17:37:05.758 -07 000000610 INF: Z Motor: Moving to -0.171824 mm, started at -0.177897 mm, distance = 6.07 um
17-03-17 17:37:05.758 -07 000000610 INF: FPGA: Xmit ZDACW 37535\n [Z Motor]
17-03-17 17:37:05.758 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 17:37:05.768 -07 000000610 INF: FPGA: 'ZDACW 37535' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:37:05.768 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:05.768 -07 000000429 INF: FPGA: Recv ZDACR 37535
17-03-17 17:37:05.778 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:05.778 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:05.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:05.928 -07 000000486 INF: FPGA: Recv ZSGSRD 36037
17-03-17 17:37:05.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:05.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:05.938 -07 000000631 INF: FPGA: Recv ZSGSRD 36037
17-03-17 17:37:05.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:05.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:05.948 -07 000000618 INF: FPGA: Recv ZSGSRD 36030
17-03-17 17:37:05.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:05.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:05.958 -07 000000429 INF: FPGA: Recv ZSGSRD 36042
17-03-17 17:37:05.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:05.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:05.968 -07 000000486 INF: FPGA: Recv ZSGSRD 36043
17-03-17 17:37:05.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:05.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:05.978 -07 000000458 INF: FPGA: Recv ZSGSRD 36036
17-03-17 17:37:05.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:05.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:05.988 -07 000000458 INF: FPGA: Recv ZSGSRD 36035
17-03-17 17:37:05.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:05.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:05.998 -07 000000458 INF: FPGA: Recv ZSGSRD 36036
17-03-17 17:37:06.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:06.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:06.008 -07 000000486 INF: FPGA: Recv ZSGSRD 36039
17-03-17 17:37:06.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:06.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:06.018 -07 000000482 INF: FPGA: Recv ZSGSRD 36034
17-03-17 17:37:06.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:06.028 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:06.028 -07 000000618 INF: FPGA: Recv ZPIEZORD 31971
17-03-17 17:37:06.038 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:06.038 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.727 V. Piezo Error = -9.0 V.
17-03-17 17:37:06.038 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.8 um, Read 10 ADC samples: Avg = 36037 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36036 (-170.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36030 (-170.9 uncal um), Max = 36043 (-171.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 17:37:06.038 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36037, posNoise = 6, negNoise = 7
17-03-17 17:37:06.038 -07 000000610 INF: Z Motor: After move to -0.171824, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:06.038 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 17:37:06.038 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:06.038 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:06.038 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:06.038 -07 000000486 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:06.038 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:06.038 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:06.038 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:06.038 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:06.038 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:06.038 -07 000000486 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:06.038 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:37:06.038 -07 000000482 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-17 17:37:06.048 -07 000000486 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:06.048 -07 000000486 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:06.058 -07 000000486 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 17:37:06.058 -07 000000486 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 17:37:06.068 -07 000000482 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 21 ms.
17-03-17 17:37:06.068 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:06.068 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:37:06.068 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:06.078 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-17 17:37:06.078 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 39 ms.
17-03-17 17:37:06.078 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 37712 150\n [Camera]
17-03-17 17:37:06.278 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:06.518 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:06.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:06.668 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-17 17:37:06.668 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-17 17:37:06.678 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:06.678 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-17 17:37:06.678 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-17 17:37:06.678 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:06.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.9907,  FlowCellCompartmentTemperature: 22.05937, AmbientTemperature: 18.80479
17-03-17 17:37:06.798 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:06.798 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 17:37:06.798 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:06.798 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-17 17:37:06.868 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37712 775
17-03-17 17:37:07.018 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:07.198 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 397 ms.
17-03-17 17:37:07.198 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 17:37:07.198 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:07.198 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 395 ms.
17-03-17 17:37:07.198 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 17:37:07.198 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:07.198 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:07.198 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 527 ms.
17-03-17 17:37:07.198 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:07.198 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:07.208 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:07.208 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:07.208 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) start.
17-03-17 17:37:07.208 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:37:07.208 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:07.208 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:07.208 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:07.208 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 535 ms.
17-03-17 17:37:07.208 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:07.208 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 1082883800, 0x0, 418435064) start.
17-03-17 17:37:07.398 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:37:07.398 -07 000000486 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:07.398 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 37712 150' command took 2 ms to send, 1301 ms to get response, and 1313 ms overall
17-03-17 17:37:07.398 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:07.398 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 2 at Y-position 59.9111328125, Z-Position -0.171832684963775. ------
17-03-17 17:37:07.398 -07 000000429 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:07.398 -07 000000631 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17811 mm
17-03-17 17:37:07.398 -07 000000631 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:07.518 -07 000000486 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:07.518 -07 000000429 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 118 ms overall
17-03-17 17:37:07.518 -07 000000429 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:07.518 -07 000000486 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-17 17:37:07.518 -07 000000486 INF: Y Motor: Moving to 60.7426 mm, started at 59.9111 mm, delta = 0.8315 mm
17-03-17 17:37:07.528 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:07.598 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) end. Duration was 395 ms.
17-03-17 17:37:07.598 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 17:37:07.598 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:07.608 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 1082883800, 0x0, 418435064) end. Duration was 393 ms.
17-03-17 17:37:07.608 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 17:37:07.608 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:07.608 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-17 17:37:07.608 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-17 17:37:07.618 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:37:07.618 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-17 17:37:07.628 -07 000000458 INF: Z Motor: Entering MoveAbsStepped (DAC = 38909, sync = True, waitForSettling = False)
17-03-17 17:37:07.628 -07 000000458 INF: Z Motor: Moving to -0.178114 mm, started at -0.171833 mm, distance = -6.28 um
17-03-17 17:37:07.628 -07 000000458 INF: FPGA: Xmit ZDACW 38909\n [Z Motor]
17-03-17 17:37:07.628 -07 000000431 INF: FPGA: Recv YRDPOS 122698
17-03-17 17:37:07.628 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 17:37:07.628 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 96 ms to get response, and 110 ms overall
17-03-17 17:37:07.628 -07 000000486 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:07.628 -07 000000486 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:07.628 -07 000000486 INF: Y Motor: Moving 1330 steps1
17-03-17 17:37:07.638 -07 000000458 INF: FPGA: 'ZDACW 38909' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:37:07.638 -07 000000486 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:07.648 -07 000000458 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:07.648 -07 000000431 INF: FPGA: Recv ZDACR 38909
17-03-17 17:37:07.658 -07 000000458 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:07.658 -07 000000458 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-17 17:37:07.718 -07 000000431 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:07.718 -07 000000429 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 197 ms to get response, and 202 ms overall
17-03-17 17:37:07.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.85681,  FlowCellCompartmentTemperature: 22.03613, AmbientTemperature: 18.80479
17-03-17 17:37:08.008 -07 000000431 INF: FPGA: Recv YMVTILE
17-03-17 17:37:08.008 -07 000000486 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 380 ms overall
17-03-17 17:37:08.038 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:08.038 -07 000000429 INF: FPGA: Recv YRDPOS 124381
17-03-17 17:37:08.048 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:08.048 -07 000000486 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:08.048 -07 000000486 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-17 17:37:08.048 -07 000000486 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.831 mm, average velocity = 2.182 mm/sec
17-03-17 17:37:08.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.85681,  FlowCellCompartmentTemperature: 22.03613, AmbientTemperature: 18.80891
17-03-17 17:37:08.998 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:08.998 -07 000000458 INF: FPGA: Recv YRDPOS 124382
17-03-17 17:37:09.008 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:09.008 -07 000000486 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:09.018 -07 000000486 INF: Y Motor: After move to 60.742607, error = -0.009209, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:09.018 -07 000000486 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 17:37:09.018 -07 000000486 INF: Y Motor: Moved to 60.7334 after 1503 ms (table move)
17-03-17 17:37:09.028 -07 000000631 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178114 mm (DAC = 38909)
17-03-17 17:37:09.028 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:09.028 -07 000000458 INF: FPGA: Recv ZSGSRD 37020
17-03-17 17:37:09.038 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:09.038 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:09.038 -07 000000431 INF: FPGA: Recv ZSGSRD 37016
17-03-17 17:37:09.048 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:09.048 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:09.048 -07 000000458 INF: FPGA: Recv ZSGSRD 37004
17-03-17 17:37:09.058 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:09.058 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:09.058 -07 000000431 INF: FPGA: Recv ZSGSRD 37018
17-03-17 17:37:09.068 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:09.068 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:09.068 -07 000000486 INF: FPGA: Recv ZSGSRD 37020
17-03-17 17:37:09.078 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:09.078 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:09.078 -07 000000431 INF: FPGA: Recv ZSGSRD 37014
17-03-17 17:37:09.088 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:37:09.088 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:09.088 -07 000000429 INF: FPGA: Recv ZSGSRD 37017
17-03-17 17:37:09.098 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:09.098 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:09.098 -07 000000541 INF: FPGA: Recv ZSGSRD 37021
17-03-17 17:37:09.108 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:09.108 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:09.108 -07 000000429 INF: FPGA: Recv ZSGSRD 37023
17-03-17 17:37:09.118 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:09.118 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:09.118 -07 000000547 INF: FPGA: Recv ZSGSRD 37014
17-03-17 17:37:09.128 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:09.128 -07 000000631 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:09.128 -07 000000486 INF: FPGA: Recv ZPIEZORD 33297
17-03-17 17:37:09.138 -07 000000631 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:09.138 -07 000000631 INF: Z Motor: Piezo is near 51.1 V (nominally 0 to 100 V), expect near 59.4 V, since DAC is at 5.937 V. Piezo Error = -8.2 V.
17-03-17 17:37:09.138 -07 000000631 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.1 um, Read 10 ADC samples: Avg = 37017 (-177.2 uncal um), Error = 0.9 uncal um, Median = 37018 (-177.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 37004 (-177.2 uncal um), Max = 37023 (-177.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 13 (0.1 uncal um)
17-03-17 17:37:09.138 -07 000000631 INF: Z Motor: ADC noise = 13, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37017, posNoise = 6, negNoise = 13
17-03-17 17:37:09.138 -07 000000631 INF: Z Motor: After move to -0.178114, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:09.138 -07 000000631 INF: Z Motor: Settle wait time = 1401 ms, measure time = 108 ms (allowed 150 ms), total time = 1509 ms
17-03-17 17:37:09.138 -07 000000631 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:09.188 -07 000000631 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1783 ms
17-03-17 17:37:09.188 -07 000000631 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:09.188 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:09.188 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:09.188 -07 000000541 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:09.188 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:09.188 -07 000000429 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:09.188 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:09.198 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 8 ms.
17-03-17 17:37:09.198 -07 000000429 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:09.198 -07 000000429 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:09.198 -07 000000429 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:09.208 -07 000000429 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-17 17:37:09.208 -07 000000429 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 20 ms.
17-03-17 17:37:09.208 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:09.258 -07 000000541 INF: FPGA: Recv @CAMSNAP turning led on 43
17-03-17 17:37:09.458 -07 000000429 INF: FPGA: Recv @CAMSNAP img rdy 243
17-03-17 17:37:09.458 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 243
17-03-17 17:37:09.458 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:09.458 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-17 17:37:09.498 -07 000000486 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:09.498 -07 000000547 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:09.498 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 273 ms to get response, and 284 ms overall
17-03-17 17:37:09.588 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 17:37:09.588 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:09.588 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:37:09.588 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 17:37:09.608 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.023489,
17-03-17 17:37:09.698 -07 000000631 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:09.698 -07 000000486 INF: Autofocus start
17-03-17 17:37:09.698 -07 000000486 INF: MeasureProfile start
17-03-17 17:37:09.698 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:09.708 -07 000000631 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:37:09.708 -07 000000631 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:09.708 -07 000000486 INF: MeasureProfile done
17-03-17 17:37:09.708 -07 000000486 INF: X=16  Z correction [um]=0.01042744
17-03-17 17:37:09.708 -07 000000486 INF: Autofocus finished
17-03-17 17:37:09.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.74023,  FlowCellCompartmentTemperature: 22.03031, AmbientTemperature: 18.80582
17-03-17 17:37:09.908 -07 000000458 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:09.908 -07 000000631 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:37:09.908 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.7333984375, Z-position -0.1781284128627. ----------
17-03-17 17:37:09.908 -07 000000610 INF: Cycle	3	Tile	2	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:09.918 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37424, sync = True, waitForSettling = True)
17-03-17 17:37:09.918 -07 000000610 INF: Z Motor: Moving to -0.171316 mm, started at -0.178128 mm, distance = 6.81 um
17-03-17 17:37:09.918 -07 000000610 INF: FPGA: Xmit ZDACW 37424\n [Z Motor]
17-03-17 17:37:09.918 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 17:37:09.928 -07 000000610 INF: FPGA: 'ZDACW 37424' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:37:09.928 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:09.928 -07 000000631 INF: FPGA: Recv ZDACR 37424
17-03-17 17:37:09.938 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:09.938 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:10.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:10.088 -07 000000486 INF: FPGA: Recv ZSGSRD 35958
17-03-17 17:37:10.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:10.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:10.098 -07 000000429 INF: FPGA: Recv ZSGSRD 35961
17-03-17 17:37:10.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:10.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:10.108 -07 000000458 INF: FPGA: Recv ZSGSRD 35959
17-03-17 17:37:10.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:10.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:10.118 -07 000000429 INF: FPGA: Recv ZSGSRD 35963
17-03-17 17:37:10.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:10.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:10.128 -07 000000486 INF: FPGA: Recv ZSGSRD 35955
17-03-17 17:37:10.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:10.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:10.138 -07 000000631 INF: FPGA: Recv ZSGSRD 35963
17-03-17 17:37:10.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:10.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:10.148 -07 000000458 INF: FPGA: Recv ZSGSRD 35955
17-03-17 17:37:10.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:10.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:10.158 -07 000000631 INF: FPGA: Recv ZSGSRD 35954
17-03-17 17:37:10.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:10.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:10.168 -07 000000429 INF: FPGA: Recv ZSGSRD 35960
17-03-17 17:37:10.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:10.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:10.178 -07 000000631 INF: FPGA: Recv ZSGSRD 35960
17-03-17 17:37:10.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:10.188 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:10.188 -07 000000458 INF: FPGA: Recv ZPIEZORD 31888
17-03-17 17:37:10.198 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:10.198 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.711 V. Piezo Error = -9.0 V.
17-03-17 17:37:10.198 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35959 (-170.5 uncal um), Error = 0.9 uncal um, Median = 35960 (-170.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35954 (-170.4 uncal um), Max = 35963 (-170.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:37:10.198 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35959, posNoise = 4, negNoise = 5
17-03-17 17:37:10.198 -07 000000610 INF: Z Motor: After move to -0.171316, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:10.198 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 17:37:10.198 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:10.198 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:10.198 -07 000000631 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:10.198 -07 000000409 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:10.198 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:10.198 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:10.198 -07 000000541 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:10.198 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:10.198 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:37:10.198 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:10.198 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:10.198 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:10.208 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:37:10.208 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:10.208 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:10.208 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:10.218 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 17:37:10.218 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 17:37:10.218 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 17:37:10.218 -07 000000541 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 17:37:10.228 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 37601 150\n [Camera]
17-03-17 17:37:10.428 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:10.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.62547,  FlowCellCompartmentTemperature: 22.0492, AmbientTemperature: 18.81201
17-03-17 17:37:10.818 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:10.818 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:10.818 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:10.818 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:10.818 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) start.
17-03-17 17:37:10.818 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:10.818 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:10.818 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:10.818 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:10.818 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:37:11.008 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37601 775
17-03-17 17:37:11.158 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:11.218 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) end. Duration was 397 ms.
17-03-17 17:37:11.218 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 17:37:11.218 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:11.218 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:11.218 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-17 17:37:11.218 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 400 ms.
17-03-17 17:37:11.218 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 17:37:11.218 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:11.218 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:11.228 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-17 17:37:11.348 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:11.348 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:11.348 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:11.348 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:11.348 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 17:37:11.348 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:11.348 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:11.348 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:11.348 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:11.348 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-17 17:37:11.518 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:11.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:11.538 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:37:11.538 -07 000000429 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:11.538 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 37601 150' command took 2 ms to send, 1303 ms to get response, and 1312 ms overall
17-03-17 17:37:11.538 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:11.538 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.7333984375, Z-Position -0.171331596416717. ------
17-03-17 17:37:11.538 -07 000000631 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:11.538 -07 000000501 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17790 mm
17-03-17 17:37:11.538 -07 000000501 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:11.548 -07 000000429 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:11.548 -07 000000631 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 17:37:11.548 -07 000000631 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:11.548 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-17 17:37:11.548 -07 000000429 INF: Y Motor: Moving to 61.5726 mm, started at 60.7334 mm, delta = 0.8392 mm
17-03-17 17:37:11.558 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:11.748 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 405 ms.
17-03-17 17:37:11.748 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-17 17:37:11.748 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:11.758 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 404 ms.
17-03-17 17:37:11.758 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-17 17:37:11.758 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:11.758 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:11.758 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:37:11.758 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 413 ms.
17-03-17 17:37:11.768 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms.
17-03-17 17:37:11.768 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 38861, sync = True, waitForSettling = False)
17-03-17 17:37:11.768 -07 000000547 INF: Z Motor: Moving to -0.177894 mm, started at -0.171332 mm, distance = -6.56 um
17-03-17 17:37:11.768 -07 000000547 INF: FPGA: Xmit ZDACW 38861\n [Z Motor]
17-03-17 17:37:11.778 -07 000000409 INF: FPGA: Recv YRDPOS 124382
17-03-17 17:37:11.778 -07 000000409 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:11.778 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 17:37:11.778 -07 000000631 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 221 ms to get response, and 229 ms overall
17-03-17 17:37:11.778 -07 000000547 INF: FPGA: 'ZDACW 38861' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 17:37:11.778 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:11.778 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 211 ms to get response, and 227 ms overall
17-03-17 17:37:11.778 -07 000000429 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:11.778 -07 000000429 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:11.778 -07 000000429 INF: Y Motor: Moving 1343 steps-20
17-03-17 17:37:11.778 -07 000000631 INF: FPGA: Recv ZDACR 38861
17-03-17 17:37:11.788 -07 000000547 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:11.788 -07 000000547 INF: Z Motor: MoveAbsStepped took 11 ms (did NOT wait for settling yet))
17-03-17 17:37:11.788 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:11.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.5213,  FlowCellCompartmentTemperature: 22.02886, AmbientTemperature: 18.81201
17-03-17 17:37:12.158 -07 000000631 INF: FPGA: Recv YMVTILE
17-03-17 17:37:12.158 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-17 17:37:12.188 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:12.198 -07 000000409 INF: FPGA: Recv YRDPOS 126084
17-03-17 17:37:12.198 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 17:37:12.198 -07 000000429 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:12.198 -07 000000429 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 17:37:12.198 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.839 mm, average velocity = 2.180 mm/sec
17-03-17 17:37:12.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.5213,  FlowCellCompartmentTemperature: 22.02886, AmbientTemperature: 18.8213
17-03-17 17:37:13.148 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:13.148 -07 000000409 INF: FPGA: Recv YRDPOS 126084
17-03-17 17:37:13.158 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:13.158 -07 000000429 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:13.178 -07 000000429 INF: Y Motor: After move to 61.572609, error = -0.008156, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:13.178 -07 000000429 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:13.178 -07 000000429 INF: Y Motor: Moved to 61.5645 after 1626 ms (table move)
17-03-17 17:37:13.178 -07 000000501 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177894 mm (DAC = 38861)
17-03-17 17:37:13.178 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:13.178 -07 000000409 INF: FPGA: Recv ZSGSRD 36980
17-03-17 17:37:13.188 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:37:13.188 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:13.188 -07 000000547 INF: FPGA: Recv ZSGSRD 36978
17-03-17 17:37:13.198 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:13.198 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:13.198 -07 000000631 INF: FPGA: Recv ZSGSRD 36979
17-03-17 17:37:13.208 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:13.208 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:13.208 -07 000000631 INF: FPGA: Recv ZSGSRD 36972
17-03-17 17:37:13.218 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:13.218 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:13.218 -07 000000631 INF: FPGA: Recv ZSGSRD 36980
17-03-17 17:37:13.228 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:13.228 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:13.228 -07 000000409 INF: FPGA: Recv ZSGSRD 36987
17-03-17 17:37:13.238 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:13.238 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:13.238 -07 000000631 INF: FPGA: Recv ZSGSRD 36989
17-03-17 17:37:13.248 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:13.248 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:13.248 -07 000000429 INF: FPGA: Recv ZSGSRD 36988
17-03-17 17:37:13.258 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:13.268 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:13.268 -07 000000547 INF: FPGA: Recv ZSGSRD 36992
17-03-17 17:37:13.278 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:37:13.278 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:13.278 -07 000000429 INF: FPGA: Recv ZSGSRD 36980
17-03-17 17:37:13.288 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:13.288 -07 000000501 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:13.288 -07 000000631 INF: FPGA: Recv ZPIEZORD 33231
17-03-17 17:37:13.298 -07 000000501 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:13.298 -07 000000501 INF: Z Motor: Piezo is near 51.0 V (nominally 0 to 100 V), expect near 59.3 V, since DAC is at 5.930 V. Piezo Error = -8.3 V.
17-03-17 17:37:13.298 -07 000000501 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.9 um, Read 10 ADC samples: Avg = 36982 (-177.0 uncal um), Error = 0.9 uncal um, Median = 36980 (-177.0 uncal um), StdDev = 6 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 36972 (-176.9 uncal um), Max = 36992 (-177.1 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 17:37:13.298 -07 000000501 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36982, posNoise = 10, negNoise = 10
17-03-17 17:37:13.298 -07 000000501 INF: Z Motor: After move to -0.177894, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:13.298 -07 000000501 INF: Z Motor: Settle wait time = 1405 ms, measure time = 117 ms (allowed 150 ms), total time = 1522 ms
17-03-17 17:37:13.298 -07 000000501 INF: Z Motor: Waiting extra 33 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:13.338 -07 000000501 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1791 ms
17-03-17 17:37:13.338 -07 000000501 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:13.338 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:13.338 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:13.338 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:13.338 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:13.338 -07 000000631 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:13.338 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:13.338 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:37:13.338 -07 000000631 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:13.348 -07 000000631 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:37:13.348 -07 000000631 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:13.358 -07 000000631 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 17:37:13.358 -07 000000631 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-17 17:37:13.358 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:13.408 -07 000000482 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:13.598 -07 000000433 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:13.608 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:13.608 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:13.608 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 594000200, 0x0, 559484976) start.
17-03-17 17:37:13.638 -07 000000618 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:13.648 -07 000000482 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:13.648 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 280 ms to get response, and 284 ms overall
17-03-17 17:37:13.718 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 594000200, 0x0, 559484976) end. Duration was 116 ms.
17-03-17 17:37:13.718 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:13.718 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:37:13.718 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-17 17:37:13.748 -07 000000429 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:13.748 -07 000000433 INF: Autofocus start
17-03-17 17:37:13.748 -07 000000433 INF: MeasureProfile start
17-03-17 17:37:13.748 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:13.758 -07 000000429 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:37:13.758 -07 000000429 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:13.758 -07 000000433 INF: MeasureProfile done
17-03-17 17:37:13.758 -07 000000433 INF: X=16  Z correction [um]=0.01042744
17-03-17 17:37:13.758 -07 000000433 INF: Autofocus finished
17-03-17 17:37:13.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.39946,  FlowCellCompartmentTemperature: 22.02886, AmbientTemperature: 18.83269
17-03-17 17:37:13.958 -07 000000424 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:13.958 -07 000000429 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 196 ms to get response, and 206 ms overall
17-03-17 17:37:13.968 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.564453125, Z-position -0.177903565437739. ----------
17-03-17 17:37:13.968 -07 000000610 INF: Cycle	3	Tile	3	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:13.968 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37376, sync = True, waitForSettling = True)
17-03-17 17:37:13.968 -07 000000610 INF: Z Motor: Moving to -0.171096 mm, started at -0.177904 mm, distance = 6.81 um
17-03-17 17:37:13.968 -07 000000610 INF: FPGA: Xmit ZDACW 37376\n [Z Motor]
17-03-17 17:37:13.968 -07 000000424 INF: FPGA: Recv ZDACW
17-03-17 17:37:13.978 -07 000000610 INF: FPGA: 'ZDACW 37376' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:37:13.978 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:13.978 -07 000000482 INF: FPGA: Recv ZDACR 37376
17-03-17 17:37:13.988 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:13.988 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:14.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:14.138 -07 000000547 INF: FPGA: Recv ZSGSRD 35922
17-03-17 17:37:14.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:14.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:14.148 -07 000000424 INF: FPGA: Recv ZSGSRD 35920
17-03-17 17:37:14.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:14.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:14.158 -07 000000424 INF: FPGA: Recv ZSGSRD 35930
17-03-17 17:37:14.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:14.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:14.168 -07 000000409 INF: FPGA: Recv ZSGSRD 35926
17-03-17 17:37:14.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:14.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:14.178 -07 000000409 INF: FPGA: Recv ZSGSRD 35928
17-03-17 17:37:14.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:14.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:14.188 -07 000000433 INF: FPGA: Recv ZSGSRD 35923
17-03-17 17:37:14.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:14.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:14.198 -07 000000424 INF: FPGA: Recv ZSGSRD 35929
17-03-17 17:37:14.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:37:14.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:14.208 -07 000000429 INF: FPGA: Recv ZSGSRD 35925
17-03-17 17:37:14.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:14.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:14.218 -07 000000424 INF: FPGA: Recv ZSGSRD 35910
17-03-17 17:37:14.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:14.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:14.228 -07 000000501 INF: FPGA: Recv ZSGSRD 35923
17-03-17 17:37:14.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:14.238 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:14.238 -07 000000429 INF: FPGA: Recv ZPIEZORD 31819
17-03-17 17:37:14.248 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:14.248 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.703 V. Piezo Error = -9.1 V.
17-03-17 17:37:14.248 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35924 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35924 (-170.2 uncal um), StdDev = 6 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 35910 (-170.1 uncal um), Max = 35930 (-170.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 14 (0.1 uncal um)
17-03-17 17:37:14.248 -07 000000610 INF: Z Motor: ADC noise = 14, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35924, posNoise = 6, negNoise = 14
17-03-17 17:37:14.248 -07 000000610 INF: Z Motor: After move to -0.171096, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:14.248 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 17:37:14.248 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:14.248 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:14.248 -07 000000631 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:14.248 -07 000000482 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:14.248 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:14.248 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:14.248 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:14.248 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:14.248 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:37:14.248 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:14.248 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:14.248 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:14.258 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:37:14.258 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:14.258 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:14.258 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:14.268 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:37:14.268 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:37:14.268 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 17:37:14.268 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 17:37:14.268 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 37553 150\n [Camera]
17-03-17 17:37:14.468 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:14.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.30092,  FlowCellCompartmentTemperature: 22.01288, AmbientTemperature: 18.83269
17-03-17 17:37:14.858 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-17 17:37:14.858 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-17 17:37:14.868 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:14.868 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:14.868 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 17:37:14.868 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-17 17:37:14.868 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-17 17:37:14.868 -07 000000631 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:14.868 -07 000000631 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:14.868 -07 000000631 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 17:37:15.048 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37553 775
17-03-17 17:37:15.118 -07 000000409 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.027603,
17-03-17 17:37:15.198 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:15.238 -07 000000631 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 370 ms.
17-03-17 17:37:15.238 -07 000000631 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-17 17:37:15.238 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:15.238 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 17:37:15.238 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:37:15.238 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:15.238 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:15.248 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:15.248 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:37:15.248 -07 000000631 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 17:37:15.388 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:15.388 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:15.388 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:15.388 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:15.388 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 17:37:15.388 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:15.388 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:15.398 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:15.398 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:15.398 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 17:37:15.578 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:37:15.578 -07 000000429 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:15.578 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 37553 150' command took 2 ms to send, 1308 ms to get response, and 1312 ms overall
17-03-17 17:37:15.588 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:15.588 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.564453125, Z-Position -0.171106748991756. ------
17-03-17 17:37:15.588 -07 000000631 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:15.588 -07 000000429 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17743 mm
17-03-17 17:37:15.588 -07 000000429 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:15.588 -07 000000409 INF: Z Motor: Entering MoveAbsStepped (DAC = 38759, sync = True, waitForSettling = False)
17-03-17 17:37:15.588 -07 000000409 INF: Z Motor: Moving to -0.177427 mm, started at -0.171107 mm, distance = -6.32 um
17-03-17 17:37:15.588 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-17 17:37:15.588 -07 000000547 INF: Y Motor: Moving to 62.4026 mm, started at 61.5645 mm, delta = 0.8382 mm
17-03-17 17:37:15.598 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:15.608 -07 000000409 INF: FPGA: Xmit ZDACW 38759\n [Z Motor]
17-03-17 17:37:15.768 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 17:37:15.768 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:37:15.768 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:15.768 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 17:37:15.768 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 17:37:15.768 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:15.778 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:15.778 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:37:15.778 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 17:37:15.788 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 17:37:15.788 -07 000000433 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:15.788 -07 000000433 INF: FPGA: Recv YRDPOS 126084
17-03-17 17:37:15.788 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 17:37:15.788 -07 000000409 INF: FPGA: 'ZDACW 38759' command took 0 ms to send, 177 ms to get response, and 200 ms overall
17-03-17 17:37:15.788 -07 000000409 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:15.788 -07 000000631 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 197 ms to get response, and 203 ms overall
17-03-17 17:37:15.788 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 187 ms to get response, and 199 ms overall
17-03-17 17:37:15.788 -07 000000547 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:15.788 -07 000000547 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:15.788 -07 000000547 INF: Y Motor: Moving 1341 steps-17
17-03-17 17:37:15.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.30092,  FlowCellCompartmentTemperature: 22.01288, AmbientTemperature: 18.83682
17-03-17 17:37:15.798 -07 000000433 INF: FPGA: Recv ZDACR 38759
17-03-17 17:37:15.798 -07 000000409 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 17:37:15.798 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:15.798 -07 000000409 INF: Z Motor: MoveAbsStepped took 203 ms (did NOT wait for settling yet))
17-03-17 17:37:15.808 -07 000000631 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:16.008 -07 000000618 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:16.008 -07 000000631 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 214 ms overall
17-03-17 17:37:16.168 -07 000000433 INF: FPGA: Recv YMVTILE
17-03-17 17:37:16.168 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 379 ms overall
17-03-17 17:37:16.208 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:16.208 -07 000000631 INF: FPGA: Recv YRDPOS 127787
17-03-17 17:37:16.218 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:37:16.218 -07 000000547 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:16.218 -07 000000547 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm)
17-03-17 17:37:16.218 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 380 ms, distance = 0.838 mm, average velocity = 2.206 mm/sec
17-03-17 17:37:16.518 -07 000000631 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:16.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:16.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.19055,  FlowCellCompartmentTemperature: 22.0492, AmbientTemperature: 18.83785
17-03-17 17:37:17.168 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:17.168 -07 000000631 INF: FPGA: Recv YRDPOS 127787
17-03-17 17:37:17.178 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:17.178 -07 000000547 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:17.188 -07 000000547 INF: Y Motor: After move to 62.402607, error = -0.006611, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:17.188 -07 000000547 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:17.188 -07 000000547 INF: Y Motor: Moved to 62.3960 after 1599 ms (table move)
17-03-17 17:37:17.198 -07 000000429 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177427 mm (DAC = 38759)
17-03-17 17:37:17.198 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:17.198 -07 000000433 INF: FPGA: Recv ZSGSRD 36909
17-03-17 17:37:17.208 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:37:17.218 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:17.218 -07 000000618 INF: FPGA: Recv ZSGSRD 36908
17-03-17 17:37:17.228 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:17.228 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:17.228 -07 000000547 INF: FPGA: Recv ZSGSRD 36914
17-03-17 17:37:17.238 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:17.238 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:17.238 -07 000000433 INF: FPGA: Recv ZSGSRD 36916
17-03-17 17:37:17.248 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:17.248 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:17.248 -07 000000547 INF: FPGA: Recv ZSGSRD 36914
17-03-17 17:37:17.258 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:17.258 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:17.258 -07 000000631 INF: FPGA: Recv ZSGSRD 36912
17-03-17 17:37:17.268 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:17.268 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:17.268 -07 000000618 INF: FPGA: Recv ZSGSRD 36908
17-03-17 17:37:17.278 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:17.278 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:17.278 -07 000000631 INF: FPGA: Recv ZSGSRD 36905
17-03-17 17:37:17.288 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:17.288 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:17.288 -07 000000409 INF: FPGA: Recv ZSGSRD 36905
17-03-17 17:37:17.298 -07 000000429 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:17.298 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:17.298 -07 000000448 INF: FPGA: Recv ZSGSRD 36910
17-03-17 17:37:17.308 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:17.308 -07 000000429 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:17.308 -07 000000433 INF: FPGA: Recv ZPIEZORD 33145
17-03-17 17:37:17.318 -07 000000429 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:17.318 -07 000000429 INF: Z Motor: Piezo is near 50.8 V (nominally 0 to 100 V), expect near 59.1 V, since DAC is at 5.914 V. Piezo Error = -8.3 V.
17-03-17 17:37:17.318 -07 000000429 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.4 um, Read 10 ADC samples: Avg = 36910 (-176.5 uncal um), Error = 0.9 uncal um, Median = 36910 (-176.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36905 (-176.5 uncal um), Max = 36916 (-176.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:37:17.318 -07 000000429 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36910, posNoise = 6, negNoise = 5
17-03-17 17:37:17.318 -07 000000429 INF: Z Motor: After move to -0.177427, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:17.318 -07 000000429 INF: Z Motor: Settle wait time = 1603 ms, measure time = 120 ms (allowed 150 ms), total time = 1723 ms
17-03-17 17:37:17.318 -07 000000429 INF: Z Motor: Waiting extra 30 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:17.348 -07 000000429 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1755 ms
17-03-17 17:37:17.348 -07 000000429 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:17.348 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:17.348 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:17.348 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:17.348 -07 000000409 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:17.348 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:17.348 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:17.348 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:17.348 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:17.358 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:37:17.358 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:17.368 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 17:37:17.368 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 17:37:17.368 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:17.418 -07 000000618 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:17.618 -07 000000429 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:17.618 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:17.618 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:17.618 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1055737960, 0x0, 559484976) start.
17-03-17 17:37:17.658 -07 000000409 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:17.658 -07 000000433 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:17.658 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 285 ms overall
17-03-17 17:37:17.728 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1055737960, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 17:37:17.728 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:17.738 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:37:17.738 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-17 17:37:17.758 -07 000000631 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:17.758 -07 000000409 INF: Autofocus start
17-03-17 17:37:17.758 -07 000000409 INF: MeasureProfile start
17-03-17 17:37:17.758 -07 000000448 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:17.768 -07 000000631 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:17.768 -07 000000631 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:17.778 -07 000000409 INF: MeasureProfile done
17-03-17 17:37:17.778 -07 000000409 INF: X=-16  Z correction [um]=-0.1496812
17-03-17 17:37:17.778 -07 000000409 INF: Autofocus finished
17-03-17 17:37:17.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 23.0908,  FlowCellCompartmentTemperature: 21.98672, AmbientTemperature: 18.83476
17-03-17 17:37:17.968 -07 000000618 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:17.968 -07 000000631 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 196 ms to get response, and 202 ms overall
17-03-17 17:37:17.968 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39599609375, Z-position -0.177441022163532. ----------
17-03-17 17:37:17.978 -07 000000610 INF: Cycle	3	Tile	4	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:17.978 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37239, sync = True, waitForSettling = True)
17-03-17 17:37:17.978 -07 000000610 INF: Z Motor: Moving to -0.170469 mm, started at -0.177441 mm, distance = 6.97 um
17-03-17 17:37:17.978 -07 000000610 INF: FPGA: Xmit ZDACW 37239\n [Z Motor]
17-03-17 17:37:17.978 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 17:37:17.988 -07 000000610 INF: FPGA: 'ZDACW 37239' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:17.988 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:17.988 -07 000000448 INF: FPGA: Recv ZDACR 37239
17-03-17 17:37:17.998 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:17.998 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:18.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:18.148 -07 000000409 INF: FPGA: Recv ZSGSRD 35825
17-03-17 17:37:18.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:18.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:18.158 -07 000000433 INF: FPGA: Recv ZSGSRD 35830
17-03-17 17:37:18.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:18.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:18.168 -07 000000458 INF: FPGA: Recv ZSGSRD 35828
17-03-17 17:37:18.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:18.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:18.178 -07 000000547 INF: FPGA: Recv ZSGSRD 35824
17-03-17 17:37:18.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:18.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:18.188 -07 000000458 INF: FPGA: Recv ZSGSRD 35826
17-03-17 17:37:18.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:18.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:18.198 -07 000000618 INF: FPGA: Recv ZSGSRD 35831
17-03-17 17:37:18.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:18.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:18.208 -07 000000458 INF: FPGA: Recv ZSGSRD 35825
17-03-17 17:37:18.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:18.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:18.218 -07 000000631 INF: FPGA: Recv ZSGSRD 35826
17-03-17 17:37:18.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:18.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:18.228 -07 000000448 INF: FPGA: Recv ZSGSRD 35827
17-03-17 17:37:18.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:18.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:18.238 -07 000000433 INF: FPGA: Recv ZSGSRD 35826
17-03-17 17:37:18.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:18.248 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:18.248 -07 000000429 INF: FPGA: Recv ZPIEZORD 31697
17-03-17 17:37:18.258 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:18.258 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.682 V. Piezo Error = -9.1 V.
17-03-17 17:37:18.258 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35827 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35826 (-169.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35824 (-169.6 uncal um), Max = 35831 (-169.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 17:37:18.258 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35827, posNoise = 4, negNoise = 3
17-03-17 17:37:18.258 -07 000000610 INF: Z Motor: After move to -0.170469, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:18.258 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 17:37:18.258 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:18.258 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:18.258 -07 000000433 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:18.258 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:18.258 -07 000000631 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:18.258 -07 000000409 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:18.258 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:18.258 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:18.258 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:37:18.258 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:18.258 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:37:18.258 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:18.258 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:18.258 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:18.258 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:37:18.258 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:18.268 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 17:37:18.268 -07 000000409 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:37:18.268 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:37:18.268 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:37:18.278 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 37416 150\n [Camera]
17-03-17 17:37:18.478 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-17 17:37:18.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.98312,  FlowCellCompartmentTemperature: 22.06806, AmbientTemperature: 18.83476
17-03-17 17:37:18.868 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:18.868 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:18.868 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:18.868 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:18.868 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 17:37:18.868 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:18.868 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:18.868 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:18.868 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:18.868 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 17:37:19.058 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37416 775
17-03-17 17:37:19.208 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:19.238 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 17:37:19.238 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 17:37:19.238 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:19.248 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 17:37:19.248 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:37:19.248 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:19.248 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:19.248 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:19.248 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:37:19.248 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 17:37:19.398 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:19.398 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:19.398 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:19.398 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:19.398 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 17:37:19.398 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:19.398 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:19.398 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:19.398 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:19.398 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 17:37:19.588 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:37:19.588 -07 000000458 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:19.588 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 37416 150' command took 2 ms to send, 1304 ms to get response, and 1312 ms overall
17-03-17 17:37:19.588 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:19.588 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 5 at Y-position 62.39599609375, Z-Position -0.170483600414005. ------
17-03-17 17:37:19.588 -07 000000631 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:19.588 -07 000000433 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17725 mm
17-03-17 17:37:19.598 -07 000000433 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:19.598 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:19.598 -07 000000409 INF: Z Motor: Entering MoveAbsStepped (DAC = 38721, sync = True, waitForSettling = False)
17-03-17 17:37:19.598 -07 000000409 INF: Z Motor: Moving to -0.177253 mm, started at -0.170484 mm, distance = -6.77 um
17-03-17 17:37:19.598 -07 000000458 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-17 17:37:19.598 -07 000000458 INF: Y Motor: Moving to 63.2326 mm, started at 62.3960 mm, delta = 0.8366 mm
17-03-17 17:37:19.608 -07 000000409 INF: FPGA: Xmit ZDACW 38721\n [Z Motor]
17-03-17 17:37:19.608 -07 000000631 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:19.608 -07 000000541 INF: FPGA: Recv ZDACW
17-03-17 17:37:19.618 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:19.618 -07 000000409 INF: FPGA: 'ZDACW 38721' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 17:37:19.618 -07 000000431 INF: FPGA: Recv YRDPOS 127787
17-03-17 17:37:19.628 -07 000000631 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:19.628 -07 000000458 INF: FPGA: 'YRDPOS' command took 3 ms to send, 0 ms to get response, and 25 ms overall
17-03-17 17:37:19.628 -07 000000458 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:19.628 -07 000000458 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:19.628 -07 000000458 INF: Y Motor: Moving 1339 steps-14
17-03-17 17:37:19.638 -07 000000409 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:19.638 -07 000000431 INF: FPGA: Recv ZDACR 38721
17-03-17 17:37:19.648 -07 000000458 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:19.648 -07 000000409 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-17 17:37:19.648 -07 000000409 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet))
17-03-17 17:37:19.788 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 390 ms.
17-03-17 17:37:19.788 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 17:37:19.788 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:19.788 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 387 ms.
17-03-17 17:37:19.788 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 17:37:19.788 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:19.788 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:19.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.98312,  FlowCellCompartmentTemperature: 22.06806, AmbientTemperature: 18.84095
17-03-17 17:37:19.798 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:37:19.798 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-17 17:37:19.798 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 17:37:19.828 -07 000000431 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:19.828 -07 000000631 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 17:37:20.018 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-17 17:37:20.018 -07 000000458 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 17:37:20.058 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:20.058 -07 000000409 INF: FPGA: Recv YRDPOS 129484
17-03-17 17:37:20.068 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:20.068 -07 000000458 INF: Y Motor: Encoder = 129484 = motor step 101159.4 = 63.2246 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:20.068 -07 000000458 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-17 17:37:20.068 -07 000000458 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.837 mm, average velocity = 2.107 mm/sec
17-03-17 17:37:20.558 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.028963,
17-03-17 17:37:20.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.88812,  FlowCellCompartmentTemperature: 21.96202, AmbientTemperature: 18.84615
17-03-17 17:37:21.018 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:21.018 -07 000000448 INF: FPGA: Recv YRDPOS 129484
17-03-17 17:37:21.028 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.028 -07 000000458 INF: Y Motor: Encoder = 129484 = motor step 101159.4 = 63.2246 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:21.038 -07 000000458 INF: Y Motor: After move to 63.232609, error = -0.007999, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:21.038 -07 000000458 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:21.048 -07 000000458 INF: Y Motor: Moved to 63.2246 after 1446 ms (table move)
17-03-17 17:37:21.048 -07 000000433 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177253 mm (DAC = 38721)
17-03-17 17:37:21.048 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:21.048 -07 000000458 INF: FPGA: Recv ZSGSRD 36884
17-03-17 17:37:21.058 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:21.058 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:21.058 -07 000000409 INF: FPGA: Recv ZSGSRD 36876
17-03-17 17:37:21.068 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.068 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:21.068 -07 000000458 INF: FPGA: Recv ZSGSRD 36884
17-03-17 17:37:21.078 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.078 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:21.078 -07 000000448 INF: FPGA: Recv ZSGSRD 36877
17-03-17 17:37:21.088 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.088 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:21.088 -07 000000486 INF: FPGA: Recv ZSGSRD 36880
17-03-17 17:37:21.098 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.098 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:21.098 -07 000000631 INF: FPGA: Recv ZSGSRD 36887
17-03-17 17:37:21.108 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.108 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:21.108 -07 000000547 INF: FPGA: Recv ZSGSRD 36885
17-03-17 17:37:21.118 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.118 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:21.118 -07 000000631 INF: FPGA: Recv ZSGSRD 36883
17-03-17 17:37:21.128 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.128 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:21.128 -07 000000448 INF: FPGA: Recv ZSGSRD 36872
17-03-17 17:37:21.138 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.138 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:21.138 -07 000000458 INF: FPGA: Recv ZSGSRD 36878
17-03-17 17:37:21.148 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.148 -07 000000433 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:21.148 -07 000000547 INF: FPGA: Recv ZPIEZORD 33114
17-03-17 17:37:21.158 -07 000000433 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.158 -07 000000433 INF: Z Motor: Piezo is near 50.7 V (nominally 0 to 100 V), expect near 59.1 V, since DAC is at 5.908 V. Piezo Error = -8.3 V.
17-03-17 17:37:21.158 -07 000000433 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.3 um, Read 10 ADC samples: Avg = 36881 (-176.4 uncal um), Error = 0.9 uncal um, Median = 36882 (-176.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 36872 (-176.3 uncal um), Max = 36887 (-176.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 17:37:21.158 -07 000000433 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36881, posNoise = 6, negNoise = 9
17-03-17 17:37:21.158 -07 000000433 INF: Z Motor: After move to -0.177253, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:21.158 -07 000000433 INF: Z Motor: Settle wait time = 1450 ms, measure time = 107 ms (allowed 150 ms), total time = 1557 ms
17-03-17 17:37:21.158 -07 000000433 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:21.208 -07 000000433 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1610 ms
17-03-17 17:37:21.208 -07 000000433 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:21.208 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:21.208 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:21.208 -07 000000409 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:21.208 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:21.208 -07 000000486 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:21.208 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:21.208 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:21.208 -07 000000486 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:21.218 -07 000000486 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-17 17:37:21.218 -07 000000486 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:21.228 -07 000000486 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 17:37:21.228 -07 000000486 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 13 ms.
17-03-17 17:37:21.228 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:21.278 -07 000000458 INF: FPGA: Recv @CAMSNAP turning led on 43
17-03-17 17:37:21.478 -07 000000433 INF: FPGA: Recv @CAMSNAP img rdy 243
17-03-17 17:37:21.478 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 243
17-03-17 17:37:21.478 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:21.478 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) start.
17-03-17 17:37:21.508 -07 000000433 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:21.508 -07 000000448 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:21.508 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 284 ms overall
17-03-17 17:37:21.518 -07 000000631 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:21.588 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 17:37:21.588 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:21.588 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:37:21.598 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 17:37:21.598 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:21.608 -07 000000486 INF: Autofocus start
17-03-17 17:37:21.608 -07 000000486 INF: MeasureProfile start
17-03-17 17:37:21.618 -07 000000433 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:21.618 -07 000000458 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:21.618 -07 000000486 INF: MeasureProfile done
17-03-17 17:37:21.618 -07 000000486 INF: X=-32  Z correction [um]=-0.2344
17-03-17 17:37:21.618 -07 000000486 INF: Autofocus finished
17-03-17 17:37:21.628 -07 000000433 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 17:37:21.648 -07 000000433 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:21.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.7861,  FlowCellCompartmentTemperature: 22.10143, AmbientTemperature: 18.84718
17-03-17 17:37:21.848 -07 000000482 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:21.848 -07 000000433 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 17:37:21.848 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.224609375, Z-position -0.177254720011421. ----------
17-03-17 17:37:21.848 -07 000000610 INF: Cycle	3	Tile	5	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:21.858 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37182, sync = True, waitForSettling = True)
17-03-17 17:37:21.858 -07 000000610 INF: Z Motor: Moving to -0.170208 mm, started at -0.177255 mm, distance = 7.05 um
17-03-17 17:37:21.858 -07 000000610 INF: FPGA: Xmit ZDACW 37182\n [Z Motor]
17-03-17 17:37:21.858 -07 000000631 INF: FPGA: Recv ZDACW
17-03-17 17:37:21.868 -07 000000610 INF: FPGA: 'ZDACW 37182' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:21.868 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:21.868 -07 000000486 INF: FPGA: Recv ZDACR 37182
17-03-17 17:37:21.878 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:21.878 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:22.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:22.028 -07 000000547 INF: FPGA: Recv ZSGSRD 35788
17-03-17 17:37:22.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:22.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:22.038 -07 000000486 INF: FPGA: Recv ZSGSRD 35791
17-03-17 17:37:22.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:22.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:22.048 -07 000000409 INF: FPGA: Recv ZSGSRD 35788
17-03-17 17:37:22.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:22.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:22.058 -07 000000433 INF: FPGA: Recv ZSGSRD 35783
17-03-17 17:37:22.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:22.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:22.068 -07 000000482 INF: FPGA: Recv ZSGSRD 35784
17-03-17 17:37:22.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:22.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:22.078 -07 000000547 INF: FPGA: Recv ZSGSRD 35783
17-03-17 17:37:22.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:22.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:22.088 -07 000000409 INF: FPGA: Recv ZSGSRD 35784
17-03-17 17:37:22.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:22.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:22.098 -07 000000433 INF: FPGA: Recv ZSGSRD 35788
17-03-17 17:37:22.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:22.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:22.108 -07 000000448 INF: FPGA: Recv ZSGSRD 35786
17-03-17 17:37:22.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:22.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:22.118 -07 000000433 INF: FPGA: Recv ZSGSRD 35789
17-03-17 17:37:22.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:22.128 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:22.128 -07 000000631 INF: FPGA: Recv ZPIEZORD 31642
17-03-17 17:37:22.138 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:22.138 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.674 V. Piezo Error = -9.1 V.
17-03-17 17:37:22.138 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.2 um, Read 10 ADC samples: Avg = 35786 (-169.3 uncal um), Error = 0.9 uncal um, Median = 35787 (-169.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35783 (-169.3 uncal um), Max = 35791 (-169.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 17:37:22.138 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35786, posNoise = 5, negNoise = 3
17-03-17 17:37:22.138 -07 000000610 INF: Z Motor: After move to -0.170208, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:22.138 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 17:37:22.138 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:22.138 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:22.138 -07 000000486 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:22.138 -07 000000433 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:22.138 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:22.138 -07 000000631 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:22.138 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:22.138 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:22.138 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 17:37:22.138 -07 000000631 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:22.138 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:22.138 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:22.148 -07 000000631 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:37:22.148 -07 000000631 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:22.148 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:22.148 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:22.148 -07 000000631 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 17:37:22.148 -07 000000631 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:37:22.158 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:37:22.158 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:37:22.158 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 37359 150\n [Camera]
17-03-17 17:37:22.358 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:22.748 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:22.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:22.748 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:22.748 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:22.748 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-17 17:37:22.748 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:22.748 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:22.748 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:22.748 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:22.748 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-17 17:37:22.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.68397,  FlowCellCompartmentTemperature: 21.92562, AmbientTemperature: 18.84718
17-03-17 17:37:22.938 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37359 775
17-03-17 17:37:23.088 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:23.128 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 17:37:23.128 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 17:37:23.128 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:37:23.128 -07 000000448 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:23.128 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 17:37:23.128 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:23.128 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:37:23.128 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 17:37:23.128 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:37:23.138 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 17:37:23.278 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:23.278 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:23.278 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:23.278 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:23.278 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-17 17:37:23.278 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:23.278 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:23.278 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:23.278 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:23.278 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 17:37:23.468 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:37:23.468 -07 000000482 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:23.468 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 37359 150' command took 2 ms to send, 1307 ms to get response, and 1314 ms overall
17-03-17 17:37:23.468 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:23.468 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 6 at Y-position 63.224609375, Z-Position -0.170220207716193. ------
17-03-17 17:37:23.478 -07 000000631 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:23.478 -07 000000409 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17658 mm
17-03-17 17:37:23.478 -07 000000409 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:23.478 -07 000000458 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:23.488 -07 000000631 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:23.488 -07 000000631 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:23.488 -07 000000486 INF: Z Motor: Entering MoveAbsStepped (DAC = 38573, sync = True, waitForSettling = False)
17-03-17 17:37:23.488 -07 000000486 INF: Z Motor: Moving to -0.176576 mm, started at -0.170220 mm, distance = -6.36 um
17-03-17 17:37:23.488 -07 000000448 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-17 17:37:23.488 -07 000000448 INF: Y Motor: Moving to 64.0626 mm, started at 63.2246 mm, delta = 0.8380 mm
17-03-17 17:37:23.498 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:23.498 -07 000000429 INF: FPGA: Recv YRDPOS 129485
17-03-17 17:37:23.508 -07 000000486 INF: FPGA: Xmit ZDACW 38573\n [Z Motor]
17-03-17 17:37:23.508 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 17:37:23.508 -07 000000448 INF: Y Motor: Encoder = 129485 = motor step 101160.2 = 63.2251 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:23.508 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 17:37:23.508 -07 000000448 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:23.508 -07 000000448 INF: Y Motor: Moving 1340 steps-16
17-03-17 17:37:23.518 -07 000000486 INF: FPGA: 'ZDACW 38573' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:37:23.518 -07 000000448 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:23.528 -07 000000486 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:23.528 -07 000000458 INF: FPGA: Recv ZDACR 38573
17-03-17 17:37:23.538 -07 000000486 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:23.538 -07 000000486 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-17 17:37:23.668 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 17:37:23.668 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 17:37:23.668 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:23.668 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 17:37:23.668 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 17:37:23.668 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:23.668 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:23.668 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:37:23.668 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 17:37:23.678 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 17:37:23.688 -07 000000618 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:23.688 -07 000000631 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:37:23.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.68397,  FlowCellCompartmentTemperature: 21.92562, AmbientTemperature: 18.85234
17-03-17 17:37:23.888 -07 000000547 INF: FPGA: Recv YMVTILE
17-03-17 17:37:23.888 -07 000000448 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-17 17:37:23.918 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:23.928 -07 000000547 INF: FPGA: Recv YRDPOS 131189
17-03-17 17:37:23.928 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 17:37:23.928 -07 000000448 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:23.928 -07 000000448 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-17 17:37:23.928 -07 000000448 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.838 mm, average velocity = 2.182 mm/sec
17-03-17 17:37:24.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.59357,  FlowCellCompartmentTemperature: 22.11883, AmbientTemperature: 18.85544
17-03-17 17:37:24.878 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:24.878 -07 000000486 INF: FPGA: Recv YRDPOS 131189
17-03-17 17:37:24.888 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:24.888 -07 000000448 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:24.898 -07 000000448 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:24.898 -07 000000448 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:24.898 -07 000000448 INF: Y Motor: Moved to 64.0571 after 1415 ms (table move)
17-03-17 17:37:24.908 -07 000000409 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176576 mm (DAC = 38573)
17-03-17 17:37:24.908 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:24.908 -07 000000433 INF: FPGA: Recv ZSGSRD 36784
17-03-17 17:37:24.918 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:24.918 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:24.918 -07 000000501 INF: FPGA: Recv ZSGSRD 36768
17-03-17 17:37:24.928 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:24.928 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:24.928 -07 000000458 INF: FPGA: Recv ZSGSRD 36771
17-03-17 17:37:24.938 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:24.938 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:24.938 -07 000000433 INF: FPGA: Recv ZSGSRD 36774
17-03-17 17:37:24.948 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:24.948 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:24.948 -07 000000458 INF: FPGA: Recv ZSGSRD 36780
17-03-17 17:37:24.958 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:24.958 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:24.958 -07 000000482 INF: FPGA: Recv ZSGSRD 36780
17-03-17 17:37:24.968 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:24.968 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:24.968 -07 000000631 INF: FPGA: Recv ZSGSRD 36779
17-03-17 17:37:24.978 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:24.978 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:24.978 -07 000000458 INF: FPGA: Recv ZSGSRD 36782
17-03-17 17:37:24.988 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:24.988 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:24.988 -07 000000501 INF: FPGA: Recv ZSGSRD 36777
17-03-17 17:37:24.998 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:24.998 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:24.998 -07 000000433 INF: FPGA: Recv ZSGSRD 36776
17-03-17 17:37:25.008 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.008 -07 000000409 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:25.008 -07 000000482 INF: FPGA: Recv ZPIEZORD 32939
17-03-17 17:37:25.018 -07 000000409 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.018 -07 000000409 INF: Z Motor: Piezo is near 50.4 V (nominally 0 to 100 V), expect near 58.9 V, since DAC is at 5.886 V. Piezo Error = -8.5 V.
17-03-17 17:37:25.018 -07 000000409 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.6 um, Read 10 ADC samples: Avg = 36777 (-175.7 uncal um), Error = 0.9 uncal um, Median = 36778 (-175.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 36768 (-175.6 uncal um), Max = 36784 (-175.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 17:37:25.018 -07 000000409 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36777, posNoise = 7, negNoise = 9
17-03-17 17:37:25.018 -07 000000409 INF: Z Motor: After move to -0.176576, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:25.018 -07 000000409 INF: Z Motor: Settle wait time = 1421 ms, measure time = 108 ms (allowed 150 ms), total time = 1529 ms
17-03-17 17:37:25.018 -07 000000409 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:25.068 -07 000000409 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1586 ms
17-03-17 17:37:25.068 -07 000000409 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:25.068 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:25.068 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:25.068 -07 000000433 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:25.068 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:25.068 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:25.068 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:25.078 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:25.078 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:25.078 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:25.078 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:25.088 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-17 17:37:25.088 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-17 17:37:25.088 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:25.138 -07 000000631 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:25.338 -07 000000409 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:25.338 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:25.338 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:25.338 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2404847376, 0x0, 559484976) start.
17-03-17 17:37:25.378 -07 000000482 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:25.378 -07 000000501 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:25.378 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 274 ms to get response, and 285 ms overall
17-03-17 17:37:25.468 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2404847376, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 17:37:25.468 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:25.468 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:37:25.468 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 17:37:25.478 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:25.478 -07 000000458 INF: Autofocus start
17-03-17 17:37:25.478 -07 000000458 INF: MeasureProfile start
17-03-17 17:37:25.478 -07 000000409 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:25.488 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:37:25.488 -07 000000482 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:25.488 -07 000000458 INF: MeasureProfile done
17-03-17 17:37:25.488 -07 000000458 INF: X=-32  Z correction [um]=-0.2344
17-03-17 17:37:25.488 -07 000000458 INF: Autofocus finished
17-03-17 17:37:25.688 -07 000000541 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:25.688 -07 000000482 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:37:25.688 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.176586601948678. ----------
17-03-17 17:37:25.698 -07 000000610 INF: Cycle	3	Tile	6	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:25.698 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37034, sync = True, waitForSettling = True)
17-03-17 17:37:25.698 -07 000000610 INF: Z Motor: Moving to -0.169531 mm, started at -0.176587 mm, distance = 7.06 um
17-03-17 17:37:25.708 -07 000000610 INF: FPGA: Xmit ZDACW 37034\n [Z Motor]
17-03-17 17:37:25.708 -07 000000541 INF: FPGA: Recv ZDACW
17-03-17 17:37:25.718 -07 000000610 INF: FPGA: 'ZDACW 37034' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 17:37:25.718 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:25.718 -07 000000482 INF: FPGA: Recv ZDACR 37034
17-03-17 17:37:25.728 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.728 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:25.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.49027,  FlowCellCompartmentTemperature: 21.90526, AmbientTemperature: 18.85234
17-03-17 17:37:25.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:25.878 -07 000000482 INF: FPGA: Recv ZSGSRD 35672
17-03-17 17:37:25.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:25.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:25.888 -07 000000501 INF: FPGA: Recv ZSGSRD 35683
17-03-17 17:37:25.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:25.898 -07 000000433 INF: FPGA: Recv ZSGSRD 35678
17-03-17 17:37:25.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:25.908 -07 000000541 INF: FPGA: Recv ZSGSRD 35680
17-03-17 17:37:25.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:25.918 -07 000000458 INF: FPGA: Recv ZSGSRD 35681
17-03-17 17:37:25.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:25.928 -07 000000541 INF: FPGA: Recv ZSGSRD 35680
17-03-17 17:37:25.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:25.938 -07 000000458 INF: FPGA: Recv ZSGSRD 35680
17-03-17 17:37:25.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:25.948 -07 000000424 INF: FPGA: Recv ZSGSRD 35681
17-03-17 17:37:25.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:25.958 -07 000000501 INF: FPGA: Recv ZSGSRD 35680
17-03-17 17:37:25.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:25.968 -07 000000631 INF: FPGA: Recv ZSGSRD 35682
17-03-17 17:37:25.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.978 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:25.978 -07 000000409 INF: FPGA: Recv ZPIEZORD 31522
17-03-17 17:37:25.988 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:25.988 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.651 V. Piezo Error = -9.2 V.
17-03-17 17:37:25.988 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.5 um, Read 10 ADC samples: Avg = 35680 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35680 (-168.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35672 (-168.6 uncal um), Max = 35683 (-168.7 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 17:37:25.988 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35680, posNoise = 3, negNoise = 8
17-03-17 17:37:25.988 -07 000000610 INF: Z Motor: After move to -0.169531, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:25.988 -07 000000610 INF: Z Motor: MoveAbsStepped took 289 ms)
17-03-17 17:37:25.988 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:25.988 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:25.988 -07 000000409 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:25.988 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:25.988 -07 000000433 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:25.988 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:25.988 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:25.988 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:25.988 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:25.988 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:25.988 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:37:25.988 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:25.998 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:25.998 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:25.998 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:37:25.998 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:26.008 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:37:26.008 -07 000000433 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:37:26.008 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:37:26.008 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:37:26.018 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 37211 150\n [Camera]
17-03-17 17:37:26.018 -07 000000482 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.011254,
17-03-17 17:37:26.208 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:26.518 -07 000000631 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:26.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:26.608 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:26.608 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:26.608 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:26.608 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:26.608 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-17 17:37:26.608 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:26.608 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:26.608 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:26.608 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:26.608 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-17 17:37:26.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.40064,  FlowCellCompartmentTemperature: 22.08693, AmbientTemperature: 18.85234
17-03-17 17:37:26.798 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37211 775
17-03-17 17:37:26.948 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:26.978 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 17:37:26.978 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 17:37:26.978 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:26.978 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 17:37:26.978 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:37:26.978 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:26.988 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:26.988 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:26.988 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 17:37:26.988 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-17 17:37:27.138 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:27.138 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:27.138 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:27.138 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:27.138 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-17 17:37:27.138 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:27.138 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:27.138 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:27.138 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:27.138 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start.
17-03-17 17:37:27.328 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:37:27.328 -07 000000482 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:27.328 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 37211 150' command took 2 ms to send, 1302 ms to get response, and 1319 ms overall
17-03-17 17:37:27.328 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:27.328 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.05712890625, Z-Position -0.169539241229166. ------
17-03-17 17:37:27.328 -07 000000631 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:27.338 -07 000000501 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17595 mm
17-03-17 17:37:27.338 -07 000000501 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:27.338 -07 000000458 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:27.338 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-17 17:37:27.338 -07 000000541 INF: Z Motor: Entering MoveAbsStepped (DAC = 38436, sync = True, waitForSettling = False)
17-03-17 17:37:27.338 -07 000000541 INF: Z Motor: Moving to -0.175949 mm, started at -0.169539 mm, distance = -6.41 um
17-03-17 17:37:27.338 -07 000000424 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-17 17:37:27.348 -07 000000631 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:27.348 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:27.348 -07 000000486 INF: FPGA: Recv YRDPOS 131190
17-03-17 17:37:27.358 -07 000000541 INF: FPGA: Xmit ZDACW 38436\n [Z Motor]
17-03-17 17:37:27.358 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 17:37:27.358 -07 000000424 INF: Y Motor: Encoder = 131190 = motor step 102492.2 = 64.0576 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:27.358 -07 000000486 INF: FPGA: Recv ZDACW
17-03-17 17:37:27.358 -07 000000424 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:27.358 -07 000000424 INF: Y Motor: Moving 1336 steps-11
17-03-17 17:37:27.368 -07 000000631 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:27.368 -07 000000541 INF: FPGA: 'ZDACW 38436' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-17 17:37:27.378 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:27.388 -07 000000541 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:27.388 -07 000000618 INF: FPGA: Recv ZDACR 38436
17-03-17 17:37:27.398 -07 000000541 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:37:27.398 -07 000000541 INF: Z Motor: MoveAbsStepped took 55 ms (did NOT wait for settling yet))
17-03-17 17:37:27.518 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 17:37:27.518 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 17:37:27.518 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:27.518 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 17:37:27.518 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 17:37:27.518 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:27.518 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:27.528 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:37:27.528 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 17:37:27.528 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 17:37:27.568 -07 000000433 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:27.568 -07 000000631 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall
17-03-17 17:37:27.748 -07 000000409 INF: FPGA: Recv YMVTILE
17-03-17 17:37:27.748 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 392 ms overall
17-03-17 17:37:27.788 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:27.788 -07 000000486 INF: FPGA: Recv YRDPOS 132873
17-03-17 17:37:27.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.40064,  FlowCellCompartmentTemperature: 22.08693, AmbientTemperature: 18.85234
17-03-17 17:37:27.798 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:27.798 -07 000000424 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:27.798 -07 000000424 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 17:37:27.798 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 393 ms, distance = 0.835 mm, average velocity = 2.126 mm/sec
17-03-17 17:37:28.748 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:28.748 -07 000000409 INF: FPGA: Recv YRDPOS 132873
17-03-17 17:37:28.758 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:28.758 -07 000000424 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:28.778 -07 000000424 INF: Y Motor: After move to 64.892609, error = -0.013214, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:28.778 -07 000000424 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:28.778 -07 000000424 INF: Y Motor: Moved to 64.8794 after 1436 ms (table move)
17-03-17 17:37:28.778 -07 000000501 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175949 mm (DAC = 38436)
17-03-17 17:37:28.778 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:28.778 -07 000000486 INF: FPGA: Recv ZSGSRD 36680
17-03-17 17:37:28.788 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:28.788 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:28.788 -07 000000424 INF: FPGA: Recv ZSGSRD 36673
17-03-17 17:37:28.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.30106,  FlowCellCompartmentTemperature: 21.946, AmbientTemperature: 18.85751
17-03-17 17:37:28.798 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:28.798 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:28.798 -07 000000424 INF: FPGA: Recv ZSGSRD 36679
17-03-17 17:37:28.808 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:28.808 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:28.808 -07 000000486 INF: FPGA: Recv ZSGSRD 36678
17-03-17 17:37:28.818 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:28.818 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:28.818 -07 000000486 INF: FPGA: Recv ZSGSRD 36682
17-03-17 17:37:28.828 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:28.828 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:28.828 -07 000000424 INF: FPGA: Recv ZSGSRD 36686
17-03-17 17:37:28.838 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:28.838 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:28.838 -07 000000458 INF: FPGA: Recv ZSGSRD 36682
17-03-17 17:37:28.848 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:28.848 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:28.848 -07 000000424 INF: FPGA: Recv ZSGSRD 36676
17-03-17 17:37:28.858 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:28.858 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:28.858 -07 000000458 INF: FPGA: Recv ZSGSRD 36673
17-03-17 17:37:28.868 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:28.868 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:28.868 -07 000000458 INF: FPGA: Recv ZSGSRD 36679
17-03-17 17:37:28.878 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:28.878 -07 000000501 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:28.878 -07 000000482 INF: FPGA: Recv ZPIEZORD 32822
17-03-17 17:37:28.888 -07 000000501 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:28.888 -07 000000501 INF: Z Motor: Piezo is near 50.1 V (nominally 0 to 100 V), expect near 58.6 V, since DAC is at 5.865 V. Piezo Error = -8.5 V.
17-03-17 17:37:28.888 -07 000000501 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.9 um, Read 10 ADC samples: Avg = 36679 (-175.1 uncal um), Error = 0.9 uncal um, Median = 36679 (-175.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36673 (-175.0 uncal um), Max = 36686 (-175.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 17:37:28.888 -07 000000501 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36679, posNoise = 7, negNoise = 6
17-03-17 17:37:28.888 -07 000000501 INF: Z Motor: After move to -0.175949, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:28.888 -07 000000501 INF: Z Motor: Settle wait time = 1439 ms, measure time = 107 ms (allowed 150 ms), total time = 1546 ms
17-03-17 17:37:28.888 -07 000000501 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:28.938 -07 000000501 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1599 ms
17-03-17 17:37:28.938 -07 000000501 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:28.938 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:28.938 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:28.938 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:28.938 -07 000000433 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:28.938 -07 000000631 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:28.938 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:28.938 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:28.938 -07 000000631 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:28.948 -07 000000631 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:37:28.948 -07 000000631 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:28.958 -07 000000631 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 17:37:28.958 -07 000000631 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-17 17:37:28.958 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:29.008 -07 000000486 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:29.208 -07 000000482 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:29.208 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:29.208 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:29.208 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2673282832, 0x0, 559484976) start.
17-03-17 17:37:29.248 -07 000000433 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:29.248 -07 000000424 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:29.248 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 283 ms to get response, and 288 ms overall
17-03-17 17:37:29.328 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2673282832, 0x0, 559484976) end. Duration was 125 ms.
17-03-17 17:37:29.328 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:29.338 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:37:29.338 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 127 ms.
17-03-17 17:37:29.348 -07 000000429 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:29.348 -07 000000618 INF: Autofocus start
17-03-17 17:37:29.348 -07 000000618 INF: MeasureProfile start
17-03-17 17:37:29.348 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:29.358 -07 000000429 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:29.358 -07 000000429 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:29.358 -07 000000618 INF: MeasureProfile done
17-03-17 17:37:29.358 -07 000000618 INF: X=32  Z correction [um]=0.09220707
17-03-17 17:37:29.358 -07 000000618 INF: Autofocus finished
17-03-17 17:37:29.558 -07 000000486 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:29.558 -07 000000429 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-17 17:37:29.558 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87939453125, Z-position -0.175957029158785. ----------
17-03-17 17:37:29.558 -07 000000610 INF: Cycle	3	Tile	7	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:29.568 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36968, sync = True, waitForSettling = True)
17-03-17 17:37:29.568 -07 000000610 INF: Z Motor: Moving to -0.169229 mm, started at -0.175957 mm, distance = 6.73 um
17-03-17 17:37:29.568 -07 000000610 INF: FPGA: Xmit ZDACW 36968\n [Z Motor]
17-03-17 17:37:29.568 -07 000000486 INF: FPGA: Recv ZDACW
17-03-17 17:37:29.578 -07 000000610 INF: FPGA: 'ZDACW 36968' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:29.578 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:29.578 -07 000000501 INF: FPGA: Recv ZDACR 36968
17-03-17 17:37:29.588 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:29.588 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:29.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:29.738 -07 000000429 INF: FPGA: Recv ZSGSRD 35631
17-03-17 17:37:29.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:29.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:29.748 -07 000000458 INF: FPGA: Recv ZSGSRD 35638
17-03-17 17:37:29.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:29.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:29.758 -07 000000424 INF: FPGA: Recv ZSGSRD 35634
17-03-17 17:37:29.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:29.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:29.768 -07 000000631 INF: FPGA: Recv ZSGSRD 35635
17-03-17 17:37:29.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:29.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:29.778 -07 000000429 INF: FPGA: Recv ZSGSRD 35637
17-03-17 17:37:29.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:29.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:29.788 -07 000000458 INF: FPGA: Recv ZSGSRD 35636
17-03-17 17:37:29.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.2221,  FlowCellCompartmentTemperature: 22.0027, AmbientTemperature: 18.85751
17-03-17 17:37:29.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:29.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:29.808 -07 000000424 INF: FPGA: Recv ZSGSRD 35630
17-03-17 17:37:29.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:29.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:29.838 -07 000000429 INF: FPGA: Recv ZSGSRD 35631
17-03-17 17:37:29.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:37:29.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:29.858 -07 000000486 INF: FPGA: Recv ZSGSRD 35630
17-03-17 17:37:29.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 17:37:29.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:29.878 -07 000000618 INF: FPGA: Recv ZSGSRD 35632
17-03-17 17:37:29.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:29.888 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:29.888 -07 000000429 INF: FPGA: Recv ZPIEZORD 31470
17-03-17 17:37:29.898 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:29.898 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.641 V. Piezo Error = -9.2 V.
17-03-17 17:37:29.898 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.2 um, Read 10 ADC samples: Avg = 35633 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35633 (-168.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35630 (-168.3 uncal um), Max = 35638 (-168.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 17:37:29.898 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35633, posNoise = 5, negNoise = 3
17-03-17 17:37:29.898 -07 000000610 INF: Z Motor: After move to -0.169229, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:29.898 -07 000000610 INF: Z Motor: MoveAbsStepped took 331 ms)
17-03-17 17:37:29.898 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:29.898 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:29.898 -07 000000458 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:29.898 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:29.898 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:29.898 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:29.898 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:29.898 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:29.898 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:29.898 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:29.898 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:37:29.898 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:29.908 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:29.908 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:29.908 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:37:29.908 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:29.908 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:37:29.908 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:37:29.918 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:37:29.918 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:37:29.918 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 37145 150\n [Camera]
17-03-17 17:37:30.118 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:30.508 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:30.508 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:30.508 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:30.508 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:30.508 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start.
17-03-17 17:37:30.508 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:30.508 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:30.508 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:30.508 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:30.508 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start.
17-03-17 17:37:30.698 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37145 775
17-03-17 17:37:30.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.2221,  FlowCellCompartmentTemperature: 22.0027, AmbientTemperature: 18.86164
17-03-17 17:37:30.848 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:30.888 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 17:37:30.888 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 17:37:30.888 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:30.888 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 17:37:30.888 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 17:37:30.888 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:30.888 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:30.888 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 17:37:30.888 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:30.898 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 17:37:31.038 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:31.038 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:31.038 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:31.038 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:31.038 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-17 17:37:31.038 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:31.038 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:31.038 -07 000000631 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:31.198 -07 000000631 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:31.208 -07 000000631 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-17 17:37:31.228 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:37:31.228 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:31.228 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 37145 150' command took 2 ms to send, 1307 ms to get response, and 1312 ms overall
17-03-17 17:37:31.228 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:31.228 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87939453125, Z-Position -0.169237303258503. ------
17-03-17 17:37:31.238 -07 000000433 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17581 mm
17-03-17 17:37:31.238 -07 000000433 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:31.238 -07 000000448 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-17 17:37:31.238 -07 000000448 INF: Y Motor: Moving to 65.7226 mm, started at 64.8794 mm, delta = 0.8432 mm
17-03-17 17:37:31.238 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 38407, sync = True, waitForSettling = False)
17-03-17 17:37:31.238 -07 000000501 INF: Z Motor: Moving to -0.175816 mm, started at -0.169237 mm, distance = -6.58 um
17-03-17 17:37:31.248 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:31.248 -07 000000431 INF: FPGA: Recv YRDPOS 132873
17-03-17 17:37:31.258 -07 000000486 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:31.258 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 17:37:31.258 -07 000000448 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:31.258 -07 000000448 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:31.258 -07 000000448 INF: Y Motor: Moving 1349 steps-27
17-03-17 17:37:31.258 -07 000000431 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:31.268 -07 000000501 INF: FPGA: Xmit ZDACW 38407\n [Z Motor]
17-03-17 17:37:31.268 -07 000000486 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-17 17:37:31.268 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 17:37:31.278 -07 000000501 INF: FPGA: 'ZDACW 38407' command took 1 ms to send, 0 ms to get response, and 31 ms overall
17-03-17 17:37:31.288 -07 000000448 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:31.298 -07 000000486 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:31.308 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:31.308 -07 000000618 INF: FPGA: Recv ZDACR 38407
17-03-17 17:37:31.318 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 39 ms overall
17-03-17 17:37:31.318 -07 000000501 INF: Z Motor: MoveAbsStepped took 71 ms (did NOT wait for settling yet))
17-03-17 17:37:31.448 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 409 ms.
17-03-17 17:37:31.448 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 410 ms.
17-03-17 17:37:31.448 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:31.458 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 17:37:31.458 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 416 ms.
17-03-17 17:37:31.498 -07 000000482 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:31.498 -07 000000486 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 230 ms overall
17-03-17 17:37:31.518 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:31.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:31.538 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.028963,
17-03-17 17:37:31.578 -07 000000631 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 370 ms.
17-03-17 17:37:31.578 -07 000000631 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-17 17:37:31.578 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:31.578 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:31.578 -07 000000631 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 540 ms.
17-03-17 17:37:31.668 -07 000000486 INF: FPGA: Recv YMVTILE
17-03-17 17:37:31.668 -07 000000448 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 411 ms overall
17-03-17 17:37:31.698 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:31.698 -07 000000431 INF: FPGA: Recv YRDPOS 134583
17-03-17 17:37:31.708 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:37:31.708 -07 000000448 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:31.708 -07 000000448 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 17:37:31.708 -07 000000448 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 411 ms, distance = 0.843 mm, average velocity = 2.052 mm/sec
17-03-17 17:37:31.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.1174,  FlowCellCompartmentTemperature: 22.03178, AmbientTemperature: 18.86473
17-03-17 17:37:32.658 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:32.658 -07 000000482 INF: FPGA: Recv YRDPOS 134583
17-03-17 17:37:32.668 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:32.668 -07 000000448 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:32.688 -07 000000448 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:32.688 -07 000000448 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:32.688 -07 000000448 INF: Y Motor: Moved to 65.7144 after 1443 ms (table move)
17-03-17 17:37:32.688 -07 000000433 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175816 mm (DAC = 38407)
17-03-17 17:37:32.688 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:32.688 -07 000000623 INF: FPGA: Recv ZSGSRD 36659
17-03-17 17:37:32.698 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:37:32.698 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:32.698 -07 000000608 INF: FPGA: Recv ZSGSRD 36658
17-03-17 17:37:32.708 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:32.708 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:32.708 -07 000000424 INF: FPGA: Recv ZSGSRD 36659
17-03-17 17:37:32.718 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:32.718 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:32.718 -07 000000618 INF: FPGA: Recv ZSGSRD 36659
17-03-17 17:37:32.728 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:32.728 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:32.728 -07 000000627 INF: FPGA: Recv ZSGSRD 36657
17-03-17 17:37:32.738 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:32.738 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:32.738 -07 000000429 INF: FPGA: Recv ZSGSRD 36660
17-03-17 17:37:32.748 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:32.748 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:32.748 -07 000000541 INF: FPGA: Recv ZSGSRD 36663
17-03-17 17:37:32.758 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:32.758 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:32.758 -07 000000482 INF: FPGA: Recv ZSGSRD 36655
17-03-17 17:37:32.768 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:32.768 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:32.768 -07 000000475 INF: FPGA: Recv ZSGSRD 36653
17-03-17 17:37:32.778 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:32.778 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:32.778 -07 000000431 INF: FPGA: Recv ZSGSRD 36660
17-03-17 17:37:32.788 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:32.788 -07 000000433 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:32.788 -07 000000429 INF: FPGA: Recv ZPIEZORD 32815
17-03-17 17:37:32.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 22.03432,  FlowCellCompartmentTemperature: 21.93728, AmbientTemperature: 18.86164
17-03-17 17:37:32.798 -07 000000433 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:32.798 -07 000000433 INF: Z Motor: Piezo is near 50.1 V (nominally 0 to 100 V), expect near 58.6 V, since DAC is at 5.861 V. Piezo Error = -8.5 V.
17-03-17 17:37:32.798 -07 000000433 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.8 um, Read 10 ADC samples: Avg = 36658 (-174.9 uncal um), Error = 0.9 uncal um, Median = 36659 (-174.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36653 (-174.9 uncal um), Max = 36663 (-175.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:37:32.798 -07 000000433 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36658, posNoise = 5, negNoise = 5
17-03-17 17:37:32.798 -07 000000433 INF: Z Motor: After move to -0.175816, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:32.798 -07 000000433 INF: Z Motor: Settle wait time = 1446 ms, measure time = 106 ms (allowed 150 ms), total time = 1552 ms
17-03-17 17:37:32.798 -07 000000433 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:32.848 -07 000000433 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms
17-03-17 17:37:32.848 -07 000000433 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:32.848 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:32.848 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:32.848 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:32.848 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:32.848 -07 000000623 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:32.848 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:32.848 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:32.848 -07 000000623 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:32.858 -07 000000623 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:37:32.858 -07 000000623 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:32.868 -07 000000623 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 17:37:32.868 -07 000000623 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-17 17:37:32.868 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:32.918 -07 000000431 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:33.118 -07 000000608 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:33.118 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:33.118 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:33.118 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1051332656, 0x0, 559484976) start.
17-03-17 17:37:33.158 -07 000000431 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:33.158 -07 000000631 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:33.158 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 285 ms to get response, and 288 ms overall
17-03-17 17:37:33.238 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1051332656, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 17:37:33.238 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:33.238 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:37:33.238 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 17:37:33.258 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:33.258 -07 000000448 INF: Autofocus start
17-03-17 17:37:33.258 -07 000000448 INF: MeasureProfile start
17-03-17 17:37:33.268 -07 000000631 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:33.268 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 3 ms to get response, and 6 ms overall
17-03-17 17:37:33.268 -07 000000618 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:33.278 -07 000000448 INF: MeasureProfile done
17-03-17 17:37:33.278 -07 000000448 INF: X=0  Z correction [um]=-0.0713522
17-03-17 17:37:33.278 -07 000000448 INF: Autofocus finished
17-03-17 17:37:33.468 -07 000000429 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:33.468 -07 000000618 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 196 ms to get response, and 202 ms overall
17-03-17 17:37:33.478 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.175822120703808. ----------
17-03-17 17:37:33.478 -07 000000610 INF: Cycle	3	Tile	8	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:33.478 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36904, sync = True, waitForSettling = True)
17-03-17 17:37:33.478 -07 000000610 INF: Z Motor: Moving to -0.168936 mm, started at -0.175822 mm, distance = 6.89 um
17-03-17 17:37:33.478 -07 000000610 INF: FPGA: Xmit ZDACW 36904\n [Z Motor]
17-03-17 17:37:33.478 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 17:37:33.488 -07 000000610 INF: FPGA: 'ZDACW 36904' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 17:37:33.488 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:33.488 -07 000000475 INF: FPGA: Recv ZDACR 36904
17-03-17 17:37:33.498 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:33.498 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:33.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:33.658 -07 000000482 INF: FPGA: Recv ZSGSRD 35587
17-03-17 17:37:33.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:33.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:33.668 -07 000000433 INF: FPGA: Recv ZSGSRD 35591
17-03-17 17:37:33.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:33.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:33.678 -07 000000448 INF: FPGA: Recv ZSGSRD 35586
17-03-17 17:37:33.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:33.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:33.688 -07 000000631 INF: FPGA: Recv ZSGSRD 35586
17-03-17 17:37:33.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:33.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:33.698 -07 000000424 INF: FPGA: Recv ZSGSRD 35587
17-03-17 17:37:33.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:33.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:33.708 -07 000000627 INF: FPGA: Recv ZSGSRD 35590
17-03-17 17:37:33.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:33.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:33.718 -07 000000486 INF: FPGA: Recv ZSGSRD 35588
17-03-17 17:37:33.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:33.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:33.728 -07 000000429 INF: FPGA: Recv ZSGSRD 35588
17-03-17 17:37:33.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:33.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:33.738 -07 000000608 INF: FPGA: Recv ZSGSRD 35589
17-03-17 17:37:33.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:33.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:33.748 -07 000000433 INF: FPGA: Recv ZSGSRD 35587
17-03-17 17:37:33.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:33.758 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:33.758 -07 000000448 INF: FPGA: Recv ZPIEZORD 31385
17-03-17 17:37:33.768 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:33.768 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.631 V. Piezo Error = -9.3 V.
17-03-17 17:37:33.768 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35588 (-168.1 uncal um), Error = 0.9 uncal um, Median = 35588 (-168.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 35586 (-168.1 uncal um), Max = 35591 (-168.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-17 17:37:33.768 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35588, posNoise = 3, negNoise = 2
17-03-17 17:37:33.768 -07 000000610 INF: Z Motor: After move to -0.168936, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:33.768 -07 000000610 INF: Z Motor: MoveAbsStepped took 285 ms)
17-03-17 17:37:33.768 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:33.768 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:33.768 -07 000000541 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:33.768 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:33.768 -07 000000486 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:33.768 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:33.768 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:33.768 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:33.768 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:37:33.768 -07 000000486 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:33.768 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:37:33.768 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:33.778 -07 000000486 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:33.778 -07 000000486 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:33.778 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:37:33.778 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:33.788 -07 000000486 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 17:37:33.788 -07 000000486 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:37:33.788 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:37:33.788 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:37:33.788 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 37080 150\n [Camera]
17-03-17 17:37:33.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 21.95218,  FlowCellCompartmentTemperature: 22.09999, AmbientTemperature: 18.86164
17-03-17 17:37:33.988 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:34.378 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:34.378 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:34.378 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:34.378 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:34.378 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:34.388 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:34.388 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:34.388 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 1070414040, 0x0, 391868352) start.
17-03-17 17:37:34.388 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:34.388 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-17 17:37:34.568 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37080 775
17-03-17 17:37:34.718 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:34.758 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 1070414040, 0x0, 391868352) end. Duration was 373 ms.
17-03-17 17:37:34.758 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-17 17:37:34.758 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:34.768 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 17:37:34.768 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 17:37:34.768 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:34.768 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:34.768 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 17:37:34.768 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:34.778 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 17:37:34.798 -07 000000442 INF: Predictive Diagnostic Log Target Temperature Set: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, TargetTemperature: 22, FlowCellHeatSinkTemperature: 21.95218,  FlowCellCompartmentTemperature: 22.09999, AmbientTemperature: 18.85957
17-03-17 17:37:34.908 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:34.908 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:34.908 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:35.018 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:35.018 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:35.018 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:35.028 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:35.028 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1066008736, 0x0, 418435064) start.
17-03-17 17:37:35.028 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:35.028 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-17 17:37:35.098 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:37:35.098 -07 000000608 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:35.098 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 37080 150' command took 2 ms to send, 1305 ms to get response, and 1312 ms overall
17-03-17 17:37:35.098 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:35.098 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 9 at Y-position 65.71435546875, Z-Position -0.168948213712124. ------
17-03-17 17:37:35.108 -07 000000627 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.17539 mm
17-03-17 17:37:35.108 -07 000000627 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:35.108 -07 000000475 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:35.108 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 38313, sync = True, waitForSettling = False)
17-03-17 17:37:35.108 -07 000000618 INF: Z Motor: Moving to -0.175386 mm, started at -0.168948 mm, distance = -6.44 um
17-03-17 17:37:35.108 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-17 17:37:35.108 -07 000000608 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-17 17:37:35.108 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:35.118 -07 000000475 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:35.118 -07 000000618 INF: FPGA: Xmit ZDACW 38313\n [Z Motor]
17-03-17 17:37:35.118 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 17:37:35.128 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:35.128 -07 000000618 INF: FPGA: 'ZDACW 38313' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 17:37:35.128 -07 000000626 INF: FPGA: Recv YRDPOS 134584
17-03-17 17:37:35.138 -07 000000475 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:35.138 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-17 17:37:35.138 -07 000000608 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:35.138 -07 000000608 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:35.138 -07 000000608 INF: Y Motor: Moving 1340 steps-17
17-03-17 17:37:35.148 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:35.148 -07 000000433 INF: FPGA: Recv ZDACR 38313
17-03-17 17:37:35.158 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:35.158 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:37:35.158 -07 000000618 INF: Z Motor: MoveAbsStepped took 45 ms (did NOT wait for settling yet))
17-03-17 17:37:35.338 -07 000000618 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:35.338 -07 000000475 INF: FPGA: 'FOCMRRFOC' command took 3 ms to send, 195 ms to get response, and 225 ms overall
17-03-17 17:37:35.408 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1066008736, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 17:37:35.408 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 17:37:35.408 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:35.408 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:35.408 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 17:37:35.408 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 17:37:35.408 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:35.418 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:35.418 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 508 ms.
17-03-17 17:37:35.418 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 17:37:35.528 -07 000000482 INF: FPGA: Recv YMVTILE
17-03-17 17:37:35.528 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 390 ms overall
17-03-17 17:37:35.568 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:35.568 -07 000000618 INF: FPGA: Recv YRDPOS 136273
17-03-17 17:37:35.578 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:35.578 -07 000000608 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:35.578 -07 000000608 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 17:37:35.578 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.838 mm, average velocity = 2.149 mm/sec
17-03-17 17:37:35.798 -07 000000442 INF: FlowCellTempControl: Setting temperature polling rate to 00:00:05 ms
17-03-17 17:37:36.518 -07 000000482 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:36.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:36.528 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:36.528 -07 000000631 INF: FPGA: Recv YRDPOS 136273
17-03-17 17:37:36.538 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:36.538 -07 000000608 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:36.558 -07 000000608 INF: Y Motor: After move to 66.552605, error = -0.013054, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:36.558 -07 000000608 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:36.558 -07 000000608 INF: Y Motor: Moved to 66.5396 after 1445 ms (table move)
17-03-17 17:37:36.558 -07 000000627 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175386 mm (DAC = 38313)
17-03-17 17:37:36.558 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:36.558 -07 000000442 INF: FPGA: Recv ZSGSRD 36595
17-03-17 17:37:36.568 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:36.568 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:36.568 -07 000000482 INF: FPGA: Recv ZSGSRD 36582
17-03-17 17:37:36.578 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:36.588 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:36.588 -07 000000442 INF: FPGA: Recv ZSGSRD 36597
17-03-17 17:37:36.598 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:36.598 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:36.598 -07 000000618 INF: FPGA: Recv ZSGSRD 36598
17-03-17 17:37:36.608 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:36.608 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:36.608 -07 000000482 INF: FPGA: Recv ZSGSRD 36590
17-03-17 17:37:36.618 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:36.618 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:36.618 -07 000000626 INF: FPGA: Recv ZSGSRD 36591
17-03-17 17:37:36.628 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:36.628 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:36.628 -07 000000475 INF: FPGA: Recv ZSGSRD 36593
17-03-17 17:37:36.638 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:36.638 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:36.638 -07 000000608 INF: FPGA: Recv ZSGSRD 36587
17-03-17 17:37:36.648 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:36.648 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:36.648 -07 000000433 INF: FPGA: Recv ZSGSRD 36588
17-03-17 17:37:36.658 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:36.658 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:36.658 -07 000000631 INF: FPGA: Recv ZSGSRD 36593
17-03-17 17:37:36.668 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:36.668 -07 000000627 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:36.668 -07 000000442 INF: FPGA: Recv ZPIEZORD 32720
17-03-17 17:37:36.678 -07 000000627 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:36.678 -07 000000627 INF: Z Motor: Piezo is near 49.9 V (nominally 0 to 100 V), expect near 58.5 V, since DAC is at 5.846 V. Piezo Error = -8.6 V.
17-03-17 17:37:36.678 -07 000000627 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.4 um, Read 10 ADC samples: Avg = 36591 (-174.5 uncal um), Error = 0.9 uncal um, Median = 36592 (-174.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 36582 (-174.4 uncal um), Max = 36598 (-174.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 17:37:36.678 -07 000000627 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36591, posNoise = 7, negNoise = 9
17-03-17 17:37:36.678 -07 000000627 INF: Z Motor: After move to -0.175386, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:36.678 -07 000000627 INF: Z Motor: Settle wait time = 1448 ms, measure time = 117 ms (allowed 150 ms), total time = 1565 ms
17-03-17 17:37:36.678 -07 000000627 INF: Z Motor: Waiting extra 33 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:36.718 -07 000000627 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1608 ms
17-03-17 17:37:36.718 -07 000000627 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:36.718 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:36.718 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:36.718 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:36.718 -07 000000631 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:36.718 -07 000000541 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:36.718 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:36.718 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:36.718 -07 000000541 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:36.728 -07 000000541 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:37:36.728 -07 000000541 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:36.738 -07 000000541 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-17 17:37:36.738 -07 000000541 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms.
17-03-17 17:37:36.738 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:36.778 -07 000000433 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:36.978 -07 000000442 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:36.978 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:36.978 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:36.988 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1051332656, 0x0, 559484976) start.
17-03-17 17:37:37.008 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.027603,
17-03-17 17:37:37.018 -07 000000482 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:37.018 -07 000000486 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:37.018 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 285 ms overall
17-03-17 17:37:37.108 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1051332656, 0x0, 559484976) end. Duration was 123 ms.
17-03-17 17:37:37.108 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:37.108 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:37:37.108 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 127 ms.
17-03-17 17:37:37.218 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:37.218 -07 000000433 INF: Autofocus start
17-03-17 17:37:37.218 -07 000000433 INF: MeasureProfile start
17-03-17 17:37:37.218 -07 000000431 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:37.228 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:37:37.228 -07 000000547 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:37.228 -07 000000433 INF: MeasureProfile done
17-03-17 17:37:37.228 -07 000000433 INF: X=-16  Z correction [um]=-0.1496812
17-03-17 17:37:37.228 -07 000000433 INF: Autofocus finished
17-03-17 17:37:37.428 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:37.428 -07 000000547 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:37:37.428 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53955078125, Z-position -0.17539169849031. ----------
17-03-17 17:37:37.428 -07 000000610 INF: Cycle	3	Tile	9	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:37.438 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36793, sync = True, waitForSettling = True)
17-03-17 17:37:37.438 -07 000000610 INF: Z Motor: Moving to -0.168428 mm, started at -0.175392 mm, distance = 6.96 um
17-03-17 17:37:37.438 -07 000000610 INF: FPGA: Xmit ZDACW 36793\n [Z Motor]
17-03-17 17:37:37.438 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 17:37:37.448 -07 000000610 INF: FPGA: 'ZDACW 36793' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:37.448 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:37.448 -07 000000541 INF: FPGA: Recv ZDACR 36793
17-03-17 17:37:37.458 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:37.458 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:37.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:37.608 -07 000000431 INF: FPGA: Recv ZSGSRD 35504
17-03-17 17:37:37.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:37.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:37.618 -07 000000482 INF: FPGA: Recv ZSGSRD 35506
17-03-17 17:37:37.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:37.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:37.628 -07 000000442 INF: FPGA: Recv ZSGSRD 35508
17-03-17 17:37:37.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:37:37.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:37.638 -07 000000475 INF: FPGA: Recv ZSGSRD 35511
17-03-17 17:37:37.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:37.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:37.648 -07 000000631 INF: FPGA: Recv ZSGSRD 35509
17-03-17 17:37:37.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:37.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:37.658 -07 000000627 INF: FPGA: Recv ZSGSRD 35506
17-03-17 17:37:37.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:37.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:37.668 -07 000000482 INF: FPGA: Recv ZSGSRD 35507
17-03-17 17:37:37.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:37.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:37.678 -07 000000475 INF: FPGA: Recv ZSGSRD 35509
17-03-17 17:37:37.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:37.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:37.688 -07 000000627 INF: FPGA: Recv ZSGSRD 35510
17-03-17 17:37:37.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:37.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:37.698 -07 000000431 INF: FPGA: Recv ZSGSRD 35507
17-03-17 17:37:37.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:37.708 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:37.708 -07 000000627 INF: FPGA: Recv ZPIEZORD 31302
17-03-17 17:37:37.718 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:37.718 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.614 V. Piezo Error = -9.3 V.
17-03-17 17:37:37.718 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.4 um, Read 10 ADC samples: Avg = 35508 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35508 (-167.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35504 (-167.5 uncal um), Max = 35511 (-167.6 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 17:37:37.718 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35508, posNoise = 3, negNoise = 4
17-03-17 17:37:37.718 -07 000000610 INF: Z Motor: After move to -0.168428, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:37.718 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 17:37:37.718 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:37.718 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:37.718 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:37.718 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:37.718 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:37.718 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:37.718 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:37.718 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:37.718 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:37:37.718 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:37.718 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:37.718 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:37.718 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:37:37.718 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:37.718 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:37.718 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:37.728 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 17:37:37.728 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:37:37.728 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 17:37:37.728 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:37:37.738 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 36970 150\n [Camera]
17-03-17 17:37:37.938 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:38.328 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:38.328 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:38.328 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:38.328 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:38.328 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) start.
17-03-17 17:37:38.328 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:38.328 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:38.328 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:38.328 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:38.328 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:37:38.518 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36970 775
17-03-17 17:37:38.668 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927
17-03-17 17:37:38.708 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 17:37:38.708 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 17:37:38.708 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:38.708 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 17:37:38.708 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 17:37:38.708 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:38.708 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:38.708 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:37:38.708 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:38.718 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 17:37:38.858 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:38.858 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:38.858 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:38.968 -07 000000442 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:38.968 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:38.968 -07 000000631 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:38.968 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:38.968 -07 000000631 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:38.968 -07 000000631 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) start.
17-03-17 17:37:38.978 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-17 17:37:39.048 -07 000000442 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:37:39.048 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:39.048 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 36970 150' command took 2 ms to send, 1304 ms to get response, and 1312 ms overall
17-03-17 17:37:39.048 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:39.048 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 10 at Y-position 66.53955078125, Z-Position -0.168434276740783. ------
17-03-17 17:37:39.058 -07 000000486 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17521 mm
17-03-17 17:37:39.058 -07 000000486 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:39.058 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:39.058 -07 000000541 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-17 17:37:39.058 -07 000000541 INF: Y Motor: Moving to 67.3826 mm, started at 66.5396 mm, delta = 0.8431 mm
17-03-17 17:37:39.058 -07 000000431 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:39.058 -07 000000627 INF: Z Motor: Entering MoveAbsStepped (DAC = 38275, sync = True, waitForSettling = False)
17-03-17 17:37:39.058 -07 000000627 INF: Z Motor: Moving to -0.175212 mm, started at -0.168434 mm, distance = -6.78 um
17-03-17 17:37:39.068 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:37:39.068 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:39.068 -07 000000618 INF: FPGA: Recv YRDPOS 136273
17-03-17 17:37:39.078 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 17:37:39.078 -07 000000482 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:39.078 -07 000000541 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:39.078 -07 000000541 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:39.078 -07 000000541 INF: Y Motor: Moving 1349 steps-27
17-03-17 17:37:39.088 -07 000000627 INF: FPGA: Xmit ZDACW 38275\n [Z Motor]
17-03-17 17:37:39.088 -07 000000608 INF: FPGA: Recv ZDACW
17-03-17 17:37:39.098 -07 000000627 INF: FPGA: 'ZDACW 38275' command took 0 ms to send, 0 ms to get response, and 33 ms overall
17-03-17 17:37:39.098 -07 000000541 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:39.108 -07 000000627 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:39.108 -07 000000475 INF: FPGA: Recv ZDACR 38275
17-03-17 17:37:39.118 -07 000000627 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:39.118 -07 000000627 INF: Z Motor: MoveAbsStepped took 53 ms (did NOT wait for settling yet))
17-03-17 17:37:39.278 -07 000000475 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:39.278 -07 000000482 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 215 ms overall
17-03-17 17:37:39.348 -07 000000631 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 17:37:39.348 -07 000000631 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 17:37:39.348 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:39.348 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 17:37:39.348 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 17:37:39.348 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:39.358 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:39.358 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:39.358 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 498 ms.
17-03-17 17:37:39.358 -07 000000631 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 17:37:39.468 -07 000000433 INF: FPGA: Recv YMVTILE
17-03-17 17:37:39.468 -07 000000541 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 17:37:39.498 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:39.508 -07 000000608 INF: FPGA: Recv YRDPOS 137978
17-03-17 17:37:39.508 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 17:37:39.508 -07 000000541 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:39.508 -07 000000541 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-17 17:37:39.508 -07 000000541 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.843 mm, average velocity = 2.129 mm/sec
17-03-17 17:37:40.458 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:40.458 -07 000000631 INF: FPGA: Recv YRDPOS 137978
17-03-17 17:37:40.468 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:40.468 -07 000000541 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:40.478 -07 000000541 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:40.478 -07 000000541 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:40.478 -07 000000541 INF: Y Motor: Moved to 67.3721 after 1424 ms (table move)
17-03-17 17:37:40.488 -07 000000486 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175212 mm (DAC = 38275)
17-03-17 17:37:40.488 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:40.488 -07 000000475 INF: FPGA: Recv ZSGSRD 36569
17-03-17 17:37:40.498 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:40.498 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:40.498 -07 000000608 INF: FPGA: Recv ZSGSRD 36560
17-03-17 17:37:40.508 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:40.508 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:40.508 -07 000000618 INF: FPGA: Recv ZSGSRD 36567
17-03-17 17:37:40.518 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:40.518 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:40.518 -07 000000442 INF: FPGA: Recv ZSGSRD 36559
17-03-17 17:37:40.528 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:40.528 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:40.528 -07 000000631 INF: FPGA: Recv ZSGSRD 36567
17-03-17 17:37:40.538 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:40.538 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:40.538 -07 000000631 INF: FPGA: Recv ZSGSRD 36570
17-03-17 17:37:40.548 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:40.548 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:40.548 -07 000000442 INF: FPGA: Recv ZSGSRD 36566
17-03-17 17:37:40.558 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:40.558 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:40.558 -07 000000541 INF: FPGA: Recv ZSGSRD 36566
17-03-17 17:37:40.568 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:40.568 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:40.568 -07 000000608 INF: FPGA: Recv ZSGSRD 36564
17-03-17 17:37:40.578 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:40.578 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:40.578 -07 000000433 INF: FPGA: Recv ZSGSRD 36565
17-03-17 17:37:40.588 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:40.588 -07 000000486 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:40.588 -07 000000631 INF: FPGA: Recv ZPIEZORD 32706
17-03-17 17:37:40.598 -07 000000486 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:40.598 -07 000000486 INF: Z Motor: Piezo is near 49.9 V (nominally 0 to 100 V), expect near 58.4 V, since DAC is at 5.840 V. Piezo Error = -8.5 V.
17-03-17 17:37:40.598 -07 000000486 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.2 um, Read 10 ADC samples: Avg = 36565 (-174.3 uncal um), Error = 0.9 uncal um, Median = 36566 (-174.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36559 (-174.3 uncal um), Max = 36570 (-174.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 17:37:40.598 -07 000000486 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36565, posNoise = 5, negNoise = 6
17-03-17 17:37:40.598 -07 000000486 INF: Z Motor: After move to -0.175212, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:40.598 -07 000000486 INF: Z Motor: Settle wait time = 1425 ms, measure time = 109 ms (allowed 150 ms), total time = 1534 ms
17-03-17 17:37:40.598 -07 000000486 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:40.648 -07 000000486 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1588 ms
17-03-17 17:37:40.648 -07 000000486 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:40.648 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:40.648 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:40.648 -07 000000442 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:40.648 -07 000000433 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:40.648 -07 000000541 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:40.648 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:40.648 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:40.648 -07 000000541 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:40.658 -07 000000541 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:37:40.658 -07 000000541 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:40.668 -07 000000541 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 17:37:40.668 -07 000000541 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 17:37:40.668 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:40.708 -07 000000547 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:40.908 -07 000000608 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:40.908 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:40.908 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:40.918 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) start.
17-03-17 17:37:40.948 -07 000000475 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:40.948 -07 000000547 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:40.948 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 284 ms overall
17-03-17 17:37:41.028 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 17:37:41.028 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:41.028 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:37:41.028 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-17 17:37:41.048 -07 000000442 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:41.048 -07 000000618 INF: Autofocus start
17-03-17 17:37:41.048 -07 000000618 INF: MeasureProfile start
17-03-17 17:37:41.048 -07 000000631 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:41.058 -07 000000442 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:37:41.058 -07 000000442 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:41.068 -07 000000618 INF: MeasureProfile done
17-03-17 17:37:41.068 -07 000000618 INF: X=32  Z correction [um]=0.09220707
17-03-17 17:37:41.068 -07 000000618 INF: Autofocus finished
17-03-17 17:37:41.258 -07 000000541 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:41.258 -07 000000442 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-17 17:37:41.258 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.175224668974624. ----------
17-03-17 17:37:41.258 -07 000000610 INF: Cycle	3	Tile	10	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:41.268 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36807, sync = True, waitForSettling = True)
17-03-17 17:37:41.268 -07 000000610 INF: Z Motor: Moving to -0.168492 mm, started at -0.175225 mm, distance = 6.73 um
17-03-17 17:37:41.268 -07 000000610 INF: FPGA: Xmit ZDACW 36807\n [Z Motor]
17-03-17 17:37:41.268 -07 000000486 INF: FPGA: Recv ZDACW
17-03-17 17:37:41.278 -07 000000610 INF: FPGA: 'ZDACW 36807' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:41.278 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:41.278 -07 000000541 INF: FPGA: Recv ZDACR 36807
17-03-17 17:37:41.288 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.288 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:41.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:41.438 -07 000000618 INF: FPGA: Recv ZSGSRD 35520
17-03-17 17:37:41.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:41.448 -07 000000475 INF: FPGA: Recv ZSGSRD 35518
17-03-17 17:37:41.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:41.458 -07 000000547 INF: FPGA: Recv ZSGSRD 35520
17-03-17 17:37:41.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:41.468 -07 000000442 INF: FPGA: Recv ZSGSRD 35513
17-03-17 17:37:41.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:41.478 -07 000000608 INF: FPGA: Recv ZSGSRD 35518
17-03-17 17:37:41.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:41.488 -07 000000442 INF: FPGA: Recv ZSGSRD 35521
17-03-17 17:37:41.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:41.498 -07 000000475 INF: FPGA: Recv ZSGSRD 35518
17-03-17 17:37:41.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:41.508 -07 000000486 INF: FPGA: Recv ZSGSRD 35521
17-03-17 17:37:41.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:41.518 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:41.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:41.518 -07 000000442 INF: FPGA: Recv ZSGSRD 35516
17-03-17 17:37:41.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:41.528 -07 000000486 INF: FPGA: Recv ZSGSRD 35520
17-03-17 17:37:41.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.538 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:41.538 -07 000000618 INF: FPGA: Recv ZPIEZORD 31314
17-03-17 17:37:41.548 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:41.548 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.616 V. Piezo Error = -9.3 V.
17-03-17 17:37:41.548 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.5 um, Read 10 ADC samples: Avg = 35518 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35519 (-167.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35513 (-167.6 uncal um), Max = 35521 (-167.6 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:37:41.548 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35518, posNoise = 3, negNoise = 5
17-03-17 17:37:41.548 -07 000000610 INF: Z Motor: After move to -0.168492, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:41.548 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 17:37:41.548 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:41.548 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:41.548 -07 000000631 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:41.548 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:41.548 -07 000000541 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:41.548 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:41.548 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:41.548 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:41.548 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:37:41.548 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:41.548 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-17 17:37:41.548 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:41.558 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:37:41.558 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:41.558 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 17:37:41.558 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:41.568 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:37:41.568 -07 000000541 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:37:41.568 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 17:37:41.568 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 17:37:41.568 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 36984 150\n [Camera]
17-03-17 17:37:41.768 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:42.158 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:42.158 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:42.158 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:42.158 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:42.158 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) start.
17-03-17 17:37:42.158 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:42.158 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:42.158 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:42.158 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:42.158 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:37:42.348 -07 000000442 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36984 775
17-03-17 17:37:42.378 -07 000000541 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.023489,
17-03-17 17:37:42.498 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:42.528 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 17:37:42.528 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 17:37:42.528 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:42.538 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 17:37:42.538 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:37:42.538 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:42.538 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:42.538 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:42.538 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:37:42.538 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 17:37:42.688 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:42.688 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:42.688 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:42.688 -07 000000442 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:42.688 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:42.688 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:42.698 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:42.698 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-17 17:37:42.698 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:42.698 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) start.
17-03-17 17:37:42.878 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP 1309
17-03-17 17:37:42.878 -07 000000631 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:42.878 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 36984 150' command took 2 ms to send, 1308 ms to get response, and 1316 ms overall
17-03-17 17:37:42.888 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:42.888 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.3720703125, Z-Position -0.168498518862201. ------
17-03-17 17:37:42.888 -07 000000618 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.17452 mm
17-03-17 17:37:42.888 -07 000000618 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:42.888 -07 000000608 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:42.888 -07 000000631 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:42.888 -07 000000486 INF: Z Motor: Entering MoveAbsStepped (DAC = 38125, sync = True, waitForSettling = False)
17-03-17 17:37:42.898 -07 000000486 INF: Z Motor: Moving to -0.174525 mm, started at -0.168499 mm, distance = -6.03 um
17-03-17 17:37:42.898 -07 000000541 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-17 17:37:42.898 -07 000000541 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-17 17:37:42.898 -07 000000486 INF: FPGA: Xmit ZDACW 38125\n [Z Motor]
17-03-17 17:37:42.898 -07 000000608 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:37:42.898 -07 000000448 INF: FPGA: Recv ZDACW
17-03-17 17:37:42.908 -07 000000486 INF: FPGA: 'ZDACW 38125' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:42.908 -07 000000608 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:42.918 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:42.918 -07 000000631 INF: FPGA: Recv YRDPOS 137979
17-03-17 17:37:42.928 -07 000000486 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:42.928 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:37:42.928 -07 000000541 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:42.928 -07 000000433 INF: FPGA: Recv ZDACR 38125
17-03-17 17:37:42.928 -07 000000541 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:42.928 -07 000000541 INF: Y Motor: Moving 1344 steps-22
17-03-17 17:37:42.938 -07 000000486 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:37:42.938 -07 000000486 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-17 17:37:42.938 -07 000000541 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:43.078 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 17:37:43.078 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 17:37:43.078 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:43.078 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 17:37:43.078 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 17:37:43.078 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:43.078 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:43.078 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 17:37:43.078 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:43.088 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 17:37:43.108 -07 000000448 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:43.108 -07 000000608 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 211 ms overall
17-03-17 17:37:43.308 -07 000000486 INF: FPGA: Recv YMVTILE
17-03-17 17:37:43.308 -07 000000541 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-17 17:37:43.348 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:43.348 -07 000000458 INF: FPGA: Recv YRDPOS 139685
17-03-17 17:37:43.358 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:43.358 -07 000000541 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:43.358 -07 000000541 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm)
17-03-17 17:37:43.358 -07 000000541 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.841 mm, average velocity = 2.183 mm/sec
17-03-17 17:37:44.308 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:44.308 -07 000000486 INF: FPGA: Recv YRDPOS 139685
17-03-17 17:37:44.318 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:44.318 -07 000000541 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:44.328 -07 000000541 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:44.328 -07 000000541 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:44.328 -07 000000541 INF: Y Motor: Moved to 68.2056 after 1437 ms (table move)
17-03-17 17:37:44.338 -07 000000618 INF: Z Motor: EndOfMoveAbsStepped: target = -0.174525 mm (DAC = 38125)
17-03-17 17:37:44.338 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:44.338 -07 000000631 INF: FPGA: Recv ZSGSRD 36456
17-03-17 17:37:44.348 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:44.348 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:44.348 -07 000000486 INF: FPGA: Recv ZSGSRD 36458
17-03-17 17:37:44.358 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:44.358 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:44.358 -07 000000458 INF: FPGA: Recv ZSGSRD 36452
17-03-17 17:37:44.368 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:44.368 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:44.368 -07 000000458 INF: FPGA: Recv ZSGSRD 36449
17-03-17 17:37:44.378 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:44.378 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:44.378 -07 000000433 INF: FPGA: Recv ZSGSRD 36461
17-03-17 17:37:44.388 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:44.388 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:44.388 -07 000000486 INF: FPGA: Recv ZSGSRD 36460
17-03-17 17:37:44.398 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:44.398 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:44.398 -07 000000631 INF: FPGA: Recv ZSGSRD 36463
17-03-17 17:37:44.408 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:44.408 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:44.408 -07 000000608 INF: FPGA: Recv ZSGSRD 36451
17-03-17 17:37:44.418 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:44.418 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:44.418 -07 000000424 INF: FPGA: Recv ZSGSRD 36450
17-03-17 17:37:44.428 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:44.428 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:44.428 -07 000000547 INF: FPGA: Recv ZSGSRD 36459
17-03-17 17:37:44.438 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:44.438 -07 000000618 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:44.438 -07 000000631 INF: FPGA: Recv ZPIEZORD 32574
17-03-17 17:37:44.448 -07 000000618 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:44.448 -07 000000618 INF: Z Motor: Piezo is near 49.6 V (nominally 0 to 100 V), expect near 58.2 V, since DAC is at 5.818 V. Piezo Error = -8.6 V.
17-03-17 17:37:44.448 -07 000000618 INF: Z Motor: ReadAdcAverage: Commanded Z = -174.5 um, Read 10 ADC samples: Avg = 36456 (-173.6 uncal um), Error = 0.9 uncal um, Median = 36457 (-173.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36449 (-173.6 uncal um), Max = 36463 (-173.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 17:37:44.448 -07 000000618 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36456, posNoise = 7, negNoise = 7
17-03-17 17:37:44.448 -07 000000618 INF: Z Motor: After move to -0.174525, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:44.448 -07 000000618 INF: Z Motor: Settle wait time = 1440 ms, measure time = 110 ms (allowed 150 ms), total time = 1550 ms
17-03-17 17:37:44.448 -07 000000618 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:44.488 -07 000000618 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1595 ms
17-03-17 17:37:44.488 -07 000000618 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:44.488 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:44.488 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:44.488 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:44.488 -07 000000448 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:44.488 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:44.488 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:44.488 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 17:37:44.488 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:44.498 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:37:44.498 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:44.508 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 17:37:44.508 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 17:37:44.508 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:44.548 -07 000000433 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:44.748 -07 000000623 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:44.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:44.748 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:44.758 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) start.
17-03-17 17:37:44.788 -07 000000475 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:44.788 -07 000000501 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:44.788 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 285 ms overall
17-03-17 17:37:44.878 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) end. Duration was 125 ms.
17-03-17 17:37:44.878 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:44.878 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:37:44.878 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-17 17:37:44.988 -07 000000631 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:44.988 -07 000000623 INF: Autofocus start
17-03-17 17:37:44.988 -07 000000623 INF: MeasureProfile start
17-03-17 17:37:44.988 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:44.998 -07 000000631 INF: FPGA: 'FOCMRRCUR 80' command took 2 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:44.998 -07 000000631 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:44.998 -07 000000623 INF: MeasureProfile done
17-03-17 17:37:44.998 -07 000000623 INF: X=96  Z correction [um]=0.4193256
17-03-17 17:37:44.998 -07 000000623 INF: Autofocus finished
17-03-17 17:37:45.198 -07 000000429 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:45.198 -07 000000631 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:37:45.198 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.174524429851172. ----------
17-03-17 17:37:45.198 -07 000000610 INF: Cycle	3	Tile	11	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:45.208 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36729, sync = True, waitForSettling = True)
17-03-17 17:37:45.208 -07 000000610 INF: Z Motor: Moving to -0.168135 mm, started at -0.174524 mm, distance = 6.39 um
17-03-17 17:37:45.208 -07 000000610 INF: FPGA: Xmit ZDACW 36729\n [Z Motor]
17-03-17 17:37:45.208 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 17:37:45.218 -07 000000610 INF: FPGA: 'ZDACW 36729' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:45.218 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:45.218 -07 000000623 INF: FPGA: Recv ZDACR 36729
17-03-17 17:37:45.228 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.228 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:45.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:45.378 -07 000000475 INF: FPGA: Recv ZSGSRD 35464
17-03-17 17:37:45.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:45.388 -07 000000429 INF: FPGA: Recv ZSGSRD 35466
17-03-17 17:37:45.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:45.398 -07 000000547 INF: FPGA: Recv ZSGSRD 35463
17-03-17 17:37:45.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:45.408 -07 000000475 INF: FPGA: Recv ZSGSRD 35461
17-03-17 17:37:45.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:45.418 -07 000000458 INF: FPGA: Recv ZSGSRD 35455
17-03-17 17:37:45.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:45.428 -07 000000631 INF: FPGA: Recv ZSGSRD 35466
17-03-17 17:37:45.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:45.438 -07 000000409 INF: FPGA: Recv ZSGSRD 35465
17-03-17 17:37:45.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:45.448 -07 000000501 INF: FPGA: Recv ZSGSRD 35462
17-03-17 17:37:45.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:45.458 -07 000000458 INF: FPGA: Recv ZSGSRD 35464
17-03-17 17:37:45.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:45.468 -07 000000433 INF: FPGA: Recv ZSGSRD 35468
17-03-17 17:37:45.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.478 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:45.478 -07 000000448 INF: FPGA: Recv ZPIEZORD 31255
17-03-17 17:37:45.488 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:45.488 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.604 V. Piezo Error = -9.3 V.
17-03-17 17:37:45.488 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.1 um, Read 10 ADC samples: Avg = 35463 (-167.3 uncal um), Error = 0.9 uncal um, Median = 35464 (-167.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35455 (-167.2 uncal um), Max = 35468 (-167.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 17:37:45.488 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35463, posNoise = 5, negNoise = 8
17-03-17 17:37:45.488 -07 000000610 INF: Z Motor: After move to -0.168135, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:45.488 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 17:37:45.488 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:45.488 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:45.488 -07 000000631 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:45.488 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:45.488 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:45.488 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:45.488 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:45.488 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:45.488 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-17 17:37:45.488 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:45.488 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:45.488 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:45.498 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:37:45.498 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:45.498 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:45.498 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:45.508 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:37:45.508 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 17:37:45.508 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 17:37:45.508 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 17 ms.
17-03-17 17:37:45.508 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 36906 150\n [Camera]
17-03-17 17:37:45.708 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:46.098 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:46.098 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:46.098 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:46.098 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:46.098 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) start.
17-03-17 17:37:46.098 -07 000000442 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:46.098 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:46.098 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:46.098 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:46.098 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:37:46.288 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36906 775
17-03-17 17:37:46.438 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:46.478 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 17:37:46.478 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 17:37:46.478 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:46.478 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 17:37:46.478 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 17:37:46.478 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:46.478 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:46.478 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:37:46.478 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:46.488 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 17:37:46.608 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:46.608 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:46.628 -07 000000442 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:46.628 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:46.628 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:46.628 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:46.628 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:46.628 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:46.638 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:46.638 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-17 17:37:46.638 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:46.638 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) start.
17-03-17 17:37:46.818 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:37:46.818 -07 000000631 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:46.818 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 36906 150' command took 2 ms to send, 1307 ms to get response, and 1312 ms overall
17-03-17 17:37:46.818 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:46.818 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.20556640625, Z-Position -0.168145187194404. ------
17-03-17 17:37:46.828 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:46.828 -07 000000547 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.17467 mm
17-03-17 17:37:46.828 -07 000000547 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:46.828 -07 000000433 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:46.828 -07 000000409 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-17 17:37:46.828 -07 000000409 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm
17-03-17 17:37:46.838 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:46.838 -07 000000475 INF: Z Motor: Entering MoveAbsStepped (DAC = 38157, sync = True, waitForSettling = False)
17-03-17 17:37:46.838 -07 000000475 INF: Z Motor: Moving to -0.174672 mm, started at -0.168145 mm, distance = -6.53 um
17-03-17 17:37:46.838 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:46.838 -07 000000442 INF: FPGA: Recv YRDPOS 139686
17-03-17 17:37:46.848 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 17:37:46.848 -07 000000409 INF: Y Motor: Encoder = 139686 = motor step 109129.7 = 68.2061 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:46.848 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:46.848 -07 000000409 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:46.848 -07 000000409 INF: Y Motor: Moving 1338 steps-14
17-03-17 17:37:46.858 -07 000000475 INF: FPGA: Xmit ZDACW 38157\n [Z Motor]
17-03-17 17:37:46.858 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 17:37:46.868 -07 000000409 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:46.868 -07 000000475 INF: FPGA: 'ZDACW 38157' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:37:46.878 -07 000000475 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:46.878 -07 000000442 INF: FPGA: Recv ZDACR 38157
17-03-17 17:37:46.888 -07 000000475 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:46.888 -07 000000475 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-17 17:37:47.018 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 17:37:47.018 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 17:37:47.018 -07 000000623 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:47.018 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 17:37:47.018 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 17:37:47.018 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:47.018 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:47.018 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:47.018 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 17:37:47.028 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 17:37:47.048 -07 000000623 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:47.048 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 194 ms to get response, and 214 ms overall
17-03-17 17:37:47.248 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-17 17:37:47.248 -07 000000409 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 396 ms overall
17-03-17 17:37:47.278 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:47.278 -07 000000475 INF: FPGA: Recv YRDPOS 141368
17-03-17 17:37:47.288 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:37:47.288 -07 000000409 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:47.288 -07 000000409 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-17 17:37:47.288 -07 000000409 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.837 mm, average velocity = 2.114 mm/sec
17-03-17 17:37:47.758 -07 000000433 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.005817,
17-03-17 17:37:48.238 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:48.238 -07 000000424 INF: FPGA: Recv YRDPOS 141369
17-03-17 17:37:48.248 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:48.248 -07 000000409 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:48.258 -07 000000409 INF: Y Motor: After move to 69.042610, error = -0.014778, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:48.258 -07 000000409 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 17:37:48.258 -07 000000409 INF: Y Motor: Moved to 69.0278 after 1432 ms (table move)
17-03-17 17:37:48.268 -07 000000547 INF: Z Motor: EndOfMoveAbsStepped: target = -0.174672 mm (DAC = 38157)
17-03-17 17:37:48.268 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:48.268 -07 000000631 INF: FPGA: Recv ZSGSRD 36482
17-03-17 17:37:48.278 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:48.278 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:48.278 -07 000000442 INF: FPGA: Recv ZSGSRD 36479
17-03-17 17:37:48.288 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:48.288 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:48.288 -07 000000475 INF: FPGA: Recv ZSGSRD 36475
17-03-17 17:37:48.298 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:48.298 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:48.298 -07 000000424 INF: FPGA: Recv ZSGSRD 36478
17-03-17 17:37:48.308 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:48.308 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:48.308 -07 000000631 INF: FPGA: Recv ZSGSRD 36477
17-03-17 17:37:48.318 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:48.318 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:48.318 -07 000000433 INF: FPGA: Recv ZSGSRD 36481
17-03-17 17:37:48.328 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:48.328 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:48.328 -07 000000623 INF: FPGA: Recv ZSGSRD 36480
17-03-17 17:37:48.338 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:48.338 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:48.338 -07 000000409 INF: FPGA: Recv ZSGSRD 36484
17-03-17 17:37:48.348 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:48.348 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:48.348 -07 000000623 INF: FPGA: Recv ZSGSRD 36484
17-03-17 17:37:48.358 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:48.358 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:48.358 -07 000000424 INF: FPGA: Recv ZSGSRD 36479
17-03-17 17:37:48.368 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:48.368 -07 000000547 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:48.368 -07 000000623 INF: FPGA: Recv ZPIEZORD 32587
17-03-17 17:37:48.378 -07 000000547 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:48.378 -07 000000547 INF: Z Motor: Piezo is near 49.6 V (nominally 0 to 100 V), expect near 58.2 V, since DAC is at 5.822 V. Piezo Error = -8.6 V.
17-03-17 17:37:48.378 -07 000000547 INF: Z Motor: ReadAdcAverage: Commanded Z = -174.7 um, Read 10 ADC samples: Avg = 36480 (-173.8 uncal um), Error = 0.9 uncal um, Median = 36480 (-173.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 36475 (-173.8 uncal um), Max = 36484 (-173.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:37:48.378 -07 000000547 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36480, posNoise = 4, negNoise = 5
17-03-17 17:37:48.378 -07 000000547 INF: Z Motor: After move to -0.174672, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:48.378 -07 000000547 INF: Z Motor: Settle wait time = 1433 ms, measure time = 107 ms (allowed 150 ms), total time = 1540 ms
17-03-17 17:37:48.378 -07 000000547 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:48.428 -07 000000547 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms
17-03-17 17:37:48.428 -07 000000547 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:48.428 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:48.428 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:48.428 -07 000000433 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:48.428 -07 000000409 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:48.428 -07 000000501 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:48.428 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:48.428 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:48.428 -07 000000501 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:48.438 -07 000000501 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:48.438 -07 000000501 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:48.448 -07 000000501 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 17:37:48.448 -07 000000501 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-17 17:37:48.448 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:48.498 -07 000000475 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:48.698 -07 000000433 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:48.698 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:48.698 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:48.698 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) start.
17-03-17 17:37:48.738 -07 000000547 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:48.738 -07 000000424 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:48.738 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 282 ms to get response, and 284 ms overall
17-03-17 17:37:48.808 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) end. Duration was 114 ms.
17-03-17 17:37:48.808 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:48.808 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:37:48.808 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 116 ms.
17-03-17 17:37:48.838 -07 000000475 INF: Autofocus start
17-03-17 17:37:48.838 -07 000000475 INF: MeasureProfile start
17-03-17 17:37:48.838 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:48.838 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:48.848 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:37:48.848 -07 000000501 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:48.848 -07 000000475 INF: MeasureProfile done
17-03-17 17:37:48.848 -07 000000475 INF: X=16  Z correction [um]=0.01042744
17-03-17 17:37:48.848 -07 000000475 INF: Autofocus finished
17-03-17 17:37:49.048 -07 000000433 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:49.048 -07 000000501 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:37:49.048 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02783203125, Z-position -0.174678610942575. ----------
17-03-17 17:37:49.048 -07 000000610 INF: Cycle	3	Tile	12	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:49.058 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36672, sync = True, waitForSettling = True)
17-03-17 17:37:49.058 -07 000000610 INF: Z Motor: Moving to -0.167874 mm, started at -0.174679 mm, distance = 6.80 um
17-03-17 17:37:49.058 -07 000000610 INF: FPGA: Xmit ZDACW 36672\n [Z Motor]
17-03-17 17:37:49.058 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 17:37:49.068 -07 000000610 INF: FPGA: 'ZDACW 36672' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:37:49.068 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:49.068 -07 000000501 INF: FPGA: Recv ZDACR 36672
17-03-17 17:37:49.078 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:49.078 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:49.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:49.228 -07 000000442 INF: FPGA: Recv ZSGSRD 35423
17-03-17 17:37:49.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:49.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:49.238 -07 000000442 INF: FPGA: Recv ZSGSRD 35425
17-03-17 17:37:49.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:49.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:49.248 -07 000000409 INF: FPGA: Recv ZSGSRD 35422
17-03-17 17:37:49.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:49.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:49.258 -07 000000547 INF: FPGA: Recv ZSGSRD 35420
17-03-17 17:37:49.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:49.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:49.268 -07 000000433 INF: FPGA: Recv ZSGSRD 35427
17-03-17 17:37:49.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:49.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:49.288 -07 000000424 INF: FPGA: Recv ZSGSRD 35419
17-03-17 17:37:49.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 12 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 17:37:49.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:49.298 -07 000000424 INF: FPGA: Recv ZSGSRD 35421
17-03-17 17:37:49.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:49.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:49.308 -07 000000501 INF: FPGA: Recv ZSGSRD 35422
17-03-17 17:37:49.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:49.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:49.318 -07 000000424 INF: FPGA: Recv ZSGSRD 35423
17-03-17 17:37:49.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:49.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:49.328 -07 000000409 INF: FPGA: Recv ZSGSRD 35419
17-03-17 17:37:49.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:49.338 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:49.338 -07 000000424 INF: FPGA: Recv ZPIEZORD 31218
17-03-17 17:37:49.348 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:49.348 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.596 V. Piezo Error = -9.3 V.
17-03-17 17:37:49.348 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35422 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35422 (-167.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35419 (-167.0 uncal um), Max = 35427 (-167.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 17:37:49.348 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35422, posNoise = 5, negNoise = 3
17-03-17 17:37:49.348 -07 000000610 INF: Z Motor: After move to -0.167874, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:49.348 -07 000000610 INF: Z Motor: MoveAbsStepped took 289 ms)
17-03-17 17:37:49.348 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:49.348 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:49.348 -07 000000433 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:49.348 -07 000000442 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:49.348 -07 000000442 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:49.348 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:49.348 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:49.348 -07 000000409 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:49.348 -07 000000442 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 17:37:49.348 -07 000000442 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:49.348 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:37:49.348 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:49.358 -07 000000442 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:37:49.358 -07 000000442 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:49.358 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:49.358 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:49.368 -07 000000442 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:37:49.368 -07 000000442 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:37:49.368 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:37:49.368 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:37:49.368 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 36848 150\n [Camera]
17-03-17 17:37:49.568 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:49.958 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:49.958 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:49.958 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:49.958 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:49.958 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) start.
17-03-17 17:37:49.958 -07 000000442 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:49.958 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:49.958 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:49.958 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:49.958 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:37:50.258 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36848 775
17-03-17 17:37:50.298 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:50.338 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 17:37:50.338 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:37:50.338 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:50.338 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 17:37:50.338 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 17:37:50.338 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:50.338 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:50.338 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 17:37:50.338 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:50.348 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 17:37:50.488 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:50.488 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:50.488 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:50.488 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:50.488 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:50.488 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:50.498 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:50.498 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-17 17:37:50.498 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:50.498 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) start.
17-03-17 17:37:50.678 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:37:50.678 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:50.678 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 36848 150' command took 2 ms to send, 1305 ms to get response, and 1312 ms overall
17-03-17 17:37:50.678 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:50.678 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 13 at Y-position 69.02783203125, Z-Position -0.167881794496592. ------
17-03-17 17:37:50.688 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:50.688 -07 000000442 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.17420 mm
17-03-17 17:37:50.688 -07 000000442 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:50.688 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:50.688 -07 000000409 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-17 17:37:50.688 -07 000000409 INF: Y Motor: Moving to 69.8726 mm, started at 69.0278 mm, delta = 0.8448 mm
17-03-17 17:37:50.688 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 38055, sync = True, waitForSettling = False)
17-03-17 17:37:50.688 -07 000000626 INF: Z Motor: Moving to -0.174205 mm, started at -0.167882 mm, distance = -6.32 um
17-03-17 17:37:50.698 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:50.698 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:50.708 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:50.708 -07 000000623 INF: FPGA: Recv YRDPOS 141369
17-03-17 17:37:50.718 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-17 17:37:50.718 -07 000000409 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:50.718 -07 000000409 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:50.718 -07 000000409 INF: Y Motor: Moving 1352 steps-31
17-03-17 17:37:50.718 -07 000000626 INF: FPGA: Xmit ZDACW 38055\n [Z Motor]
17-03-17 17:37:50.718 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 17:37:50.728 -07 000000626 INF: FPGA: 'ZDACW 38055' command took 1 ms to send, 0 ms to get response, and 32 ms overall
17-03-17 17:37:50.728 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:50.728 -07 000000475 INF: FPGA: Recv ZDACR 38055
17-03-17 17:37:50.738 -07 000000409 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:50.738 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:50.738 -07 000000626 INF: Z Motor: MoveAbsStepped took 43 ms (did NOT wait for settling yet))
17-03-17 17:37:50.868 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 17:37:50.868 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 17:37:50.868 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:50.868 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 17:37:50.868 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 17:37:50.868 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:50.878 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:50.878 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:50.878 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 17:37:50.878 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 17:37:50.898 -07 000000431 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:50.898 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:37:51.108 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 17:37:51.108 -07 000000409 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 17:37:51.138 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:51.148 -07 000000448 INF: FPGA: Recv YRDPOS 143081
17-03-17 17:37:51.148 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 17:37:51.148 -07 000000409 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:51.148 -07 000000409 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-17 17:37:51.148 -07 000000409 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.845 mm, average velocity = 2.123 mm/sec
17-03-17 17:37:51.518 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:51.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:52.098 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:52.098 -07 000000482 INF: FPGA: Recv YRDPOS 143081
17-03-17 17:37:52.108 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:52.108 -07 000000409 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:52.118 -07 000000409 INF: Y Motor: After move to 69.872612, error = -0.008842, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:52.118 -07 000000409 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:52.118 -07 000000409 INF: Y Motor: Moved to 69.8638 after 1432 ms (table move)
17-03-17 17:37:52.128 -07 000000442 INF: Z Motor: EndOfMoveAbsStepped: target = -0.174205 mm (DAC = 38055)
17-03-17 17:37:52.128 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:52.128 -07 000000458 INF: FPGA: Recv ZSGSRD 36406
17-03-17 17:37:52.138 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:52.138 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:52.138 -07 000000627 INF: FPGA: Recv ZSGSRD 36402
17-03-17 17:37:52.148 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:52.148 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:52.148 -07 000000626 INF: FPGA: Recv ZSGSRD 36403
17-03-17 17:37:52.158 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:52.158 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:52.158 -07 000000431 INF: FPGA: Recv ZSGSRD 36400
17-03-17 17:37:52.168 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:52.168 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:52.168 -07 000000458 INF: FPGA: Recv ZSGSRD 36408
17-03-17 17:37:52.178 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:52.178 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:52.178 -07 000000475 INF: FPGA: Recv ZSGSRD 36413
17-03-17 17:37:52.188 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:52.188 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:52.188 -07 000000424 INF: FPGA: Recv ZSGSRD 36410
17-03-17 17:37:52.198 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:52.198 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:52.198 -07 000000431 INF: FPGA: Recv ZSGSRD 36406
17-03-17 17:37:52.208 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:52.208 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:52.208 -07 000000409 INF: FPGA: Recv ZSGSRD 36405
17-03-17 17:37:52.218 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:52.218 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:52.218 -07 000000627 INF: FPGA: Recv ZSGSRD 36407
17-03-17 17:37:52.228 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:52.228 -07 000000442 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:52.228 -07 000000424 INF: FPGA: Recv ZPIEZORD 32481
17-03-17 17:37:52.238 -07 000000442 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:52.238 -07 000000442 INF: Z Motor: Piezo is near 49.4 V (nominally 0 to 100 V), expect near 58.1 V, since DAC is at 5.807 V. Piezo Error = -8.7 V.
17-03-17 17:37:52.238 -07 000000442 INF: Z Motor: ReadAdcAverage: Commanded Z = -174.2 um, Read 10 ADC samples: Avg = 36406 (-173.3 uncal um), Error = 0.9 uncal um, Median = 36406 (-173.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36400 (-173.3 uncal um), Max = 36413 (-173.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 17:37:52.238 -07 000000442 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36406, posNoise = 7, negNoise = 6
17-03-17 17:37:52.238 -07 000000442 INF: Z Motor: After move to -0.174205, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:52.238 -07 000000442 INF: Z Motor: Settle wait time = 1436 ms, measure time = 107 ms (allowed 150 ms), total time = 1543 ms
17-03-17 17:37:52.238 -07 000000442 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:52.288 -07 000000442 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1599 ms
17-03-17 17:37:52.288 -07 000000442 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:52.288 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:52.288 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:52.288 -07 000000623 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:52.288 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:52.288 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:52.288 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:52.288 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:52.288 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:52.298 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:52.298 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:52.308 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-17 17:37:52.308 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 19 ms.
17-03-17 17:37:52.308 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:52.358 -07 000000623 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:52.558 -07 000000458 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:52.558 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:52.558 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:52.558 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) start.
17-03-17 17:37:52.598 -07 000000501 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:52.598 -07 000000433 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:52.598 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 283 ms to get response, and 284 ms overall
17-03-17 17:37:52.668 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) end. Duration was 114 ms.
17-03-17 17:37:52.668 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:52.678 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:37:52.678 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 17:37:52.698 -07 000000433 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:52.698 -07 000000631 INF: Autofocus start
17-03-17 17:37:52.698 -07 000000631 INF: MeasureProfile start
17-03-17 17:37:52.698 -07 000000448 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:52.708 -07 000000433 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:37:52.708 -07 000000433 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:52.718 -07 000000631 INF: MeasureProfile done
17-03-17 17:37:52.718 -07 000000631 INF: X=0  Z correction [um]=-0.0713522
17-03-17 17:37:52.718 -07 000000631 INF: Autofocus finished
17-03-17 17:37:52.908 -07 000000623 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:52.908 -07 000000433 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:37:52.908 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86376953125, Z-position -0.174203219244084. ----------
17-03-17 17:37:52.908 -07 000000610 INF: Cycle	3	Tile	13	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:52.918 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36551, sync = True, waitForSettling = True)
17-03-17 17:37:52.918 -07 000000610 INF: Z Motor: Moving to -0.167320 mm, started at -0.174203 mm, distance = 6.88 um
17-03-17 17:37:52.918 -07 000000610 INF: FPGA: Xmit ZDACW 36551\n [Z Motor]
17-03-17 17:37:52.918 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 17:37:52.928 -07 000000610 INF: FPGA: 'ZDACW 36551' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:52.928 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:52.928 -07 000000501 INF: FPGA: Recv ZDACR 36551
17-03-17 17:37:52.938 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:52.938 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:53.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:53.088 -07 000000623 INF: FPGA: Recv ZSGSRD 35331
17-03-17 17:37:53.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:53.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:53.098 -07 000000433 INF: FPGA: Recv ZSGSRD 35336
17-03-17 17:37:53.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:53.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:53.118 -07 000000482 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.014009,
17-03-17 17:37:53.118 -07 000000623 INF: FPGA: Recv ZSGSRD 35345
17-03-17 17:37:53.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:53.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:53.138 -07 000000424 INF: FPGA: Recv ZSGSRD 35326
17-03-17 17:37:53.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:53.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:53.148 -07 000000431 INF: FPGA: Recv ZSGSRD 35340
17-03-17 17:37:53.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:53.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:53.178 -07 000000623 INF: FPGA: Recv ZSGSRD 35333
17-03-17 17:37:53.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:37:53.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:53.198 -07 000000431 INF: FPGA: Recv ZSGSRD 35338
17-03-17 17:37:53.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:53.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:53.208 -07 000000631 INF: FPGA: Recv ZSGSRD 35336
17-03-17 17:37:53.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:53.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:53.218 -07 000000424 INF: FPGA: Recv ZSGSRD 35334
17-03-17 17:37:53.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:53.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:53.228 -07 000000433 INF: FPGA: Recv ZSGSRD 35339
17-03-17 17:37:53.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:53.238 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:53.238 -07 000000501 INF: FPGA: Recv ZPIEZORD 31079
17-03-17 17:37:53.248 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:53.248 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.577 V. Piezo Error = -9.4 V.
17-03-17 17:37:53.248 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.3 um, Read 10 ADC samples: Avg = 35336 (-166.5 uncal um), Error = 0.9 uncal um, Median = 35336 (-166.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 35326 (-166.4 uncal um), Max = 35345 (-166.5 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 17:37:53.248 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35336, posNoise = 9, negNoise = 10
17-03-17 17:37:53.248 -07 000000610 INF: Z Motor: After move to -0.167320, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:53.248 -07 000000610 INF: Z Motor: MoveAbsStepped took 329 ms)
17-03-17 17:37:53.248 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:53.248 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:53.248 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:53.248 -07 000000623 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:53.248 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:53.248 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:53.248 -07 000000631 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:53.248 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:53.248 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:37:53.248 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:53.248 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:53.248 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:53.258 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:37:53.258 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:53.258 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:37:53.258 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:53.268 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-17 17:37:53.268 -07 000000623 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 17:37:53.268 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 17:37:53.268 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 17:37:53.268 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 36728 150\n [Camera]
17-03-17 17:37:53.468 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:53.858 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:53.858 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:53.858 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:53.858 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:53.858 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 17:37:53.858 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:53.858 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:53.858 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:53.858 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:53.868 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 17:37:54.048 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36728 775
17-03-17 17:37:54.198 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:54.238 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 17:37:54.238 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 17:37:54.238 -07 000000448 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:54.238 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 17:37:54.238 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 17:37:54.238 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:54.238 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:54.238 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:54.238 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 17:37:54.248 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 17:37:54.388 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:54.388 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:54.388 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:54.388 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:54.388 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 17:37:54.388 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:54.388 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:54.388 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:54.388 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:54.388 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 17:37:54.578 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:37:54.578 -07 000000482 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:54.578 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 36728 150' command took 2 ms to send, 1309 ms to get response, and 1315 ms overall
17-03-17 17:37:54.588 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:54.588 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 14 at Y-position 69.86376953125, Z-Position -0.1673293122524. ------
17-03-17 17:37:54.588 -07 000000448 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:54.588 -07 000000501 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.17378 mm
17-03-17 17:37:54.588 -07 000000501 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:54.598 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:54.598 -07 000000448 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:37:54.598 -07 000000448 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:54.598 -07 000000631 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-17 17:37:54.598 -07 000000631 INF: Y Motor: Moving to 70.7026 mm, started at 69.8638 mm, delta = 0.8388 mm
17-03-17 17:37:54.598 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 37961, sync = True, waitForSettling = False)
17-03-17 17:37:54.598 -07 000000618 INF: Z Motor: Moving to -0.173774 mm, started at -0.167329 mm, distance = -6.45 um
17-03-17 17:37:54.608 -07 000000618 INF: FPGA: Xmit ZDACW 37961\n [Z Motor]
17-03-17 17:37:54.608 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 17:37:54.618 -07 000000631 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:54.618 -07 000000618 INF: FPGA: 'ZDACW 37961' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 17:37:54.618 -07 000000424 INF: FPGA: Recv YRDPOS 143082
17-03-17 17:37:54.628 -07 000000631 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-17 17:37:54.628 -07 000000631 INF: Y Motor: Encoder = 143082 = motor step 111782.8 = 69.8643 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:54.628 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:54.628 -07 000000482 INF: FPGA: Recv ZDACR 37961
17-03-17 17:37:54.628 -07 000000631 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:54.628 -07 000000631 INF: Y Motor: Moving 1341 steps-18
17-03-17 17:37:54.638 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:37:54.638 -07 000000631 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:54.638 -07 000000618 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-17 17:37:54.768 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 17:37:54.768 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 17:37:54.768 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:54.768 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 17:37:54.768 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 17:37:54.768 -07 000000623 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:54.778 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:54.778 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:37:54.778 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 17:37:54.788 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 17:37:54.798 -07 000000458 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:54.798 -07 000000448 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 203 ms overall
17-03-17 17:37:55.008 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-17 17:37:55.008 -07 000000631 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-17 17:37:55.048 -07 000000631 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:55.048 -07 000000433 INF: FPGA: Recv YRDPOS 144771
17-03-17 17:37:55.058 -07 000000631 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:55.058 -07 000000631 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:55.058 -07 000000631 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 17:37:55.058 -07 000000631 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.839 mm, average velocity = 2.179 mm/sec
17-03-17 17:37:56.008 -07 000000631 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:56.008 -07 000000433 INF: FPGA: Recv YRDPOS 144771
17-03-17 17:37:56.018 -07 000000631 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.018 -07 000000631 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:56.028 -07 000000631 INF: Y Motor: After move to 70.702606, error = -0.013641, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:56.028 -07 000000631 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:56.028 -07 000000631 INF: Y Motor: Moved to 70.6890 after 1435 ms (table move)
17-03-17 17:37:56.038 -07 000000501 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173774 mm (DAC = 37961)
17-03-17 17:37:56.038 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.038 -07 000000482 INF: FPGA: Recv ZSGSRD 36340
17-03-17 17:37:56.048 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:56.048 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.048 -07 000000431 INF: FPGA: Recv ZSGSRD 36340
17-03-17 17:37:56.058 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.058 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.058 -07 000000429 INF: FPGA: Recv ZSGSRD 36338
17-03-17 17:37:56.068 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.068 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.068 -07 000000623 INF: FPGA: Recv ZSGSRD 36341
17-03-17 17:37:56.078 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.078 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.078 -07 000000424 INF: FPGA: Recv ZSGSRD 36337
17-03-17 17:37:56.088 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.088 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.088 -07 000000429 INF: FPGA: Recv ZSGSRD 36341
17-03-17 17:37:56.098 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.098 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.098 -07 000000433 INF: FPGA: Recv ZSGSRD 36354
17-03-17 17:37:56.108 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.108 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.108 -07 000000623 INF: FPGA: Recv ZSGSRD 36341
17-03-17 17:37:56.118 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.118 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.118 -07 000000608 INF: FPGA: Recv ZSGSRD 36341
17-03-17 17:37:56.128 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.128 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.128 -07 000000618 INF: FPGA: Recv ZSGSRD 36339
17-03-17 17:37:56.138 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.138 -07 000000501 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:56.138 -07 000000608 INF: FPGA: Recv ZPIEZORD 32457
17-03-17 17:37:56.148 -07 000000501 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.148 -07 000000501 INF: Z Motor: Piezo is near 49.3 V (nominally 0 to 100 V), expect near 57.9 V, since DAC is at 5.792 V. Piezo Error = -8.6 V.
17-03-17 17:37:56.148 -07 000000501 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.8 um, Read 10 ADC samples: Avg = 36341 (-172.9 uncal um), Error = 0.9 uncal um, Median = 36340 (-172.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 36337 (-172.9 uncal um), Max = 36354 (-173.0 uncal um), Pos Noise = 13 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 17:37:56.148 -07 000000501 INF: Z Motor: ADC noise = 13, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36341, posNoise = 13, negNoise = 4
17-03-17 17:37:56.148 -07 000000501 INF: Z Motor: After move to -0.173774, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:56.148 -07 000000501 INF: Z Motor: Settle wait time = 1439 ms, measure time = 107 ms (allowed 150 ms), total time = 1546 ms
17-03-17 17:37:56.148 -07 000000501 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 17:37:56.198 -07 000000501 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-17 17:37:56.198 -07 000000501 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:37:56.198 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:56.198 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:56.198 -07 000000631 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:56.198 -07 000000486 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:37:56.198 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:56.198 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:56.198 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:56.198 -07 000000486 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:37:56.208 -07 000000486 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:37:56.208 -07 000000486 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:37:56.208 -07 000000486 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 17:37:56.208 -07 000000486 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-17 17:37:56.218 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:37:56.258 -07 000000431 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:37:56.458 -07 000000501 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:37:56.458 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:37:56.458 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:37:56.458 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 682359904, 0x0, 559484976) start.
17-03-17 17:37:56.498 -07 000000448 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:37:56.498 -07 000000458 INF: FPGA: Recv CAMSNAP
17-03-17 17:37:56.498 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 277 ms to get response, and 284 ms overall
17-03-17 17:37:56.518 -07 000000433 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:37:56.578 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 682359904, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 17:37:56.578 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:56.578 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:37:56.578 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 17:37:56.578 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:37:56.598 -07 000000486 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:56.598 -07 000000448 INF: Autofocus start
17-03-17 17:37:56.598 -07 000000448 INF: MeasureProfile start
17-03-17 17:37:56.598 -07 000000431 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:56.608 -07 000000486 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:37:56.608 -07 000000486 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:37:56.608 -07 000000448 INF: MeasureProfile done
17-03-17 17:37:56.608 -07 000000448 INF: X=32  Z correction [um]=0.09220707
17-03-17 17:37:56.608 -07 000000448 INF: Autofocus finished
17-03-17 17:37:56.808 -07 000000424 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:37:56.808 -07 000000486 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:37:56.818 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68896484375, Z-position -0.17378564545487. ----------
17-03-17 17:37:56.818 -07 000000610 INF: Cycle	3	Tile	14	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:37:56.818 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36494, sync = True, waitForSettling = True)
17-03-17 17:37:56.818 -07 000000610 INF: Z Motor: Moving to -0.167059 mm, started at -0.173786 mm, distance = 6.73 um
17-03-17 17:37:56.818 -07 000000610 INF: FPGA: Xmit ZDACW 36494\n [Z Motor]
17-03-17 17:37:56.818 -07 000000424 INF: FPGA: Recv ZDACW
17-03-17 17:37:56.828 -07 000000610 INF: FPGA: 'ZDACW 36494' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:37:56.828 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:56.828 -07 000000431 INF: FPGA: Recv ZDACR 36494
17-03-17 17:37:56.838 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:56.838 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:37:56.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.988 -07 000000541 INF: FPGA: Recv ZSGSRD 35296
17-03-17 17:37:56.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:56.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:56.998 -07 000000486 INF: FPGA: Recv ZSGSRD 35299
17-03-17 17:37:57.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:57.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:57.008 -07 000000482 INF: FPGA: Recv ZSGSRD 35295
17-03-17 17:37:57.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:57.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:57.018 -07 000000431 INF: FPGA: Recv ZSGSRD 35294
17-03-17 17:37:57.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:57.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:57.028 -07 000000541 INF: FPGA: Recv ZSGSRD 35302
17-03-17 17:37:57.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:57.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:57.038 -07 000000486 INF: FPGA: Recv ZSGSRD 35294
17-03-17 17:37:57.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:57.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:57.048 -07 000000448 INF: FPGA: Recv ZSGSRD 35301
17-03-17 17:37:57.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:57.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:57.058 -07 000000541 INF: FPGA: Recv ZSGSRD 35296
17-03-17 17:37:57.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:57.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:57.068 -07 000000429 INF: FPGA: Recv ZSGSRD 35291
17-03-17 17:37:57.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:57.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:57.078 -07 000000424 INF: FPGA: Recv ZSGSRD 35298
17-03-17 17:37:57.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:57.088 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:57.088 -07 000000486 INF: FPGA: Recv ZPIEZORD 31041
17-03-17 17:37:57.098 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:57.098 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.569 V. Piezo Error = -9.4 V.
17-03-17 17:37:57.098 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35297 (-166.2 uncal um), Error = 0.8 uncal um, Median = 35296 (-166.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35291 (-166.2 uncal um), Max = 35302 (-166.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 17:37:57.098 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35297, posNoise = 5, negNoise = 6
17-03-17 17:37:57.098 -07 000000610 INF: Z Motor: After move to -0.167059, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:57.098 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 17:37:57.098 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:37:57.098 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:37:57.098 -07 000000458 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:37:57.098 -07 000000541 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:37:57.098 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:37:57.098 -07 000000486 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:37:57.098 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:37:57.098 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:37:57.098 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:37:57.098 -07 000000486 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:37:57.098 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:37:57.098 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:37:57.108 -07 000000486 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:37:57.108 -07 000000486 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:37:57.108 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:37:57.108 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:37:57.118 -07 000000486 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 17:37:57.118 -07 000000486 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:37:57.118 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:37:57.118 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:37:57.118 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 36671 150\n [Camera]
17-03-17 17:37:57.318 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:37:57.708 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:37:57.708 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:37:57.708 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:57.708 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:57.708 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 17:37:57.708 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:37:57.708 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:37:57.708 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:57.708 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:57.708 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 17:37:57.898 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36671 775
17-03-17 17:37:58.048 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:37:58.088 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 17:37:58.088 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 17:37:58.088 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:58.088 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 17:37:58.088 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 17:37:58.088 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:58.088 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:58.088 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:37:58.088 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 17:37:58.098 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-17 17:37:58.238 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:37:58.238 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:37:58.238 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:37:58.238 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:37:58.238 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 17:37:58.238 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:37:58.238 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:37:58.238 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:37:58.238 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:37:58.238 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 17:37:58.428 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:37:58.428 -07 000000608 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:37:58.428 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 36671 150' command took 2 ms to send, 1305 ms to get response, and 1312 ms overall
17-03-17 17:37:58.428 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:37:58.428 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.68896484375, Z-Position -0.167078767978871. ------
17-03-17 17:37:58.438 -07 000000433 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:37:58.438 -07 000000448 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.17376 mm
17-03-17 17:37:58.438 -07 000000448 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:37:58.438 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:37:58.438 -07 000000608 INF: Z Motor: Entering MoveAbsStepped (DAC = 37959, sync = True, waitForSettling = False)
17-03-17 17:37:58.438 -07 000000608 INF: Z Motor: Moving to -0.173765 mm, started at -0.167079 mm, distance = -6.69 um
17-03-17 17:37:58.438 -07 000000482 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-17 17:37:58.438 -07 000000482 INF: Y Motor: Moving to 71.5326 mm, started at 70.6890 mm, delta = 0.8436 mm
17-03-17 17:37:58.448 -07 000000433 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:37:58.448 -07 000000608 INF: FPGA: Xmit ZDACW 37959\n [Z Motor]
17-03-17 17:37:58.448 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 17:37:58.458 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:58.458 -07 000000608 INF: FPGA: 'ZDACW 37959' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 17:37:58.458 -07 000000486 INF: FPGA: Recv YRDPOS 144771
17-03-17 17:37:58.468 -07 000000433 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:37:58.468 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 17:37:58.468 -07 000000482 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:58.468 -07 000000482 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:37:58.468 -07 000000482 INF: Y Motor: Moving 1350 steps-28
17-03-17 17:37:58.478 -07 000000608 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:37:58.478 -07 000000618 INF: FPGA: Recv ZDACR 37959
17-03-17 17:37:58.488 -07 000000482 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:37:58.488 -07 000000608 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:37:58.488 -07 000000608 INF: Z Motor: MoveAbsStepped took 44 ms (did NOT wait for settling yet))
17-03-17 17:37:58.518 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.020806,
17-03-17 17:37:58.618 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 17:37:58.618 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 17:37:58.618 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:58.618 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 17:37:58.618 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 17:37:58.618 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:37:58.618 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:37:58.628 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:37:58.628 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 17:37:58.628 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 17:37:58.668 -07 000000486 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:37:58.668 -07 000000433 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 17:37:58.858 -07 000000458 INF: FPGA: Recv YMVTILE
17-03-17 17:37:58.858 -07 000000482 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 17:37:58.888 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:58.898 -07 000000458 INF: FPGA: Recv YRDPOS 146472
17-03-17 17:37:58.898 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 17:37:58.898 -07 000000482 INF: Y Motor: Encoder = 146472 = motor step 114431.3 = 71.5195 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:58.898 -07 000000482 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 17:37:58.898 -07 000000482 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.125 mm/sec
17-03-17 17:37:59.848 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:37:59.848 -07 000000608 INF: FPGA: Recv YRDPOS 146472
17-03-17 17:37:59.858 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:37:59.858 -07 000000482 INF: Y Motor: Encoder = 146472 = motor step 114431.3 = 71.5195 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:37:59.878 -07 000000482 INF: Y Motor: After move to 71.532608, error = -0.013077, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:37:59.878 -07 000000482 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:37:59.878 -07 000000482 INF: Y Motor: Moved to 71.5195 after 1434 ms (table move)
17-03-17 17:37:59.878 -07 000000448 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173765 mm (DAC = 37959)
17-03-17 17:37:59.878 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:59.878 -07 000000631 INF: FPGA: Recv ZSGSRD 36333
17-03-17 17:37:59.888 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:37:59.888 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:59.888 -07 000000433 INF: FPGA: Recv ZSGSRD 36333
17-03-17 17:37:59.898 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:59.898 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:59.898 -07 000000618 INF: FPGA: Recv ZSGSRD 36336
17-03-17 17:37:59.908 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:59.908 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:59.908 -07 000000433 INF: FPGA: Recv ZSGSRD 36329
17-03-17 17:37:59.918 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:59.918 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:59.918 -07 000000631 INF: FPGA: Recv ZSGSRD 36338
17-03-17 17:37:59.928 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:59.928 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:59.928 -07 000000482 INF: FPGA: Recv ZSGSRD 36342
17-03-17 17:37:59.938 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:59.938 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:59.938 -07 000000631 INF: FPGA: Recv ZSGSRD 36344
17-03-17 17:37:59.948 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:59.948 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:59.948 -07 000000608 INF: FPGA: Recv ZSGSRD 36343
17-03-17 17:37:59.958 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:59.958 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:59.958 -07 000000458 INF: FPGA: Recv ZSGSRD 36342
17-03-17 17:37:59.968 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:59.968 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:37:59.968 -07 000000433 INF: FPGA: Recv ZSGSRD 36341
17-03-17 17:37:59.978 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:59.978 -07 000000448 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:37:59.978 -07 000000608 INF: FPGA: Recv ZPIEZORD 32438
17-03-17 17:37:59.988 -07 000000448 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:37:59.988 -07 000000448 INF: Z Motor: Piezo is near 49.3 V (nominally 0 to 100 V), expect near 57.9 V, since DAC is at 5.792 V. Piezo Error = -8.6 V.
17-03-17 17:37:59.988 -07 000000448 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.8 um, Read 10 ADC samples: Avg = 36338 (-172.9 uncal um), Error = 0.9 uncal um, Median = 36340 (-172.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 36329 (-172.8 uncal um), Max = 36344 (-172.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 17:37:59.988 -07 000000448 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36338, posNoise = 6, negNoise = 9
17-03-17 17:37:59.988 -07 000000448 INF: Z Motor: After move to -0.173765, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:37:59.988 -07 000000448 INF: Z Motor: Settle wait time = 1438 ms, measure time = 106 ms (allowed 150 ms), total time = 1544 ms
17-03-17 17:37:59.988 -07 000000448 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:00.038 -07 000000448 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-17 17:38:00.038 -07 000000448 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:00.038 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:00.038 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:00.038 -07 000000448 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:00.038 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:00.038 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:00.038 -07 000000482 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:00.038 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:00.038 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:00.048 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:00.048 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:00.048 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 17:38:00.048 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-17 17:38:00.058 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:00.098 -07 000000458 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:00.298 -07 000000618 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:00.298 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:00.298 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:00.298 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) start.
17-03-17 17:38:00.338 -07 000000486 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:00.338 -07 000000448 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:00.338 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 276 ms to get response, and 285 ms overall
17-03-17 17:38:00.418 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 17:38:00.418 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:00.418 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:38:00.418 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-17 17:38:00.438 -07 000000486 INF: Autofocus start
17-03-17 17:38:00.438 -07 000000486 INF: MeasureProfile start
17-03-17 17:38:00.438 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:00.438 -07 000000448 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:00.448 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:00.448 -07 000000482 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:00.448 -07 000000486 INF: MeasureProfile done
17-03-17 17:38:00.448 -07 000000486 INF: X=32  Z correction [um]=0.09220707
17-03-17 17:38:00.448 -07 000000486 INF: Autofocus finished
17-03-17 17:38:00.648 -07 000000458 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:00.648 -07 000000482 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:38:00.648 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51953125, Z-position -0.173766372818445. ----------
17-03-17 17:38:00.648 -07 000000610 INF: Cycle	3	Tile	15	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:00.658 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36492, sync = True, waitForSettling = True)
17-03-17 17:38:00.658 -07 000000610 INF: Z Motor: Moving to -0.167050 mm, started at -0.173766 mm, distance = 6.72 um
17-03-17 17:38:00.658 -07 000000610 INF: FPGA: Xmit ZDACW 36492\n [Z Motor]
17-03-17 17:38:00.658 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 17:38:00.668 -07 000000610 INF: FPGA: 'ZDACW 36492' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:38:00.668 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:00.668 -07 000000448 INF: FPGA: Recv ZDACR 36492
17-03-17 17:38:00.678 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:00.678 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:00.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:00.828 -07 000000618 INF: FPGA: Recv ZSGSRD 35290
17-03-17 17:38:00.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:00.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:00.838 -07 000000433 INF: FPGA: Recv ZSGSRD 35299
17-03-17 17:38:00.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:00.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:00.848 -07 000000486 INF: FPGA: Recv ZSGSRD 35295
17-03-17 17:38:00.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:00.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:00.858 -07 000000608 INF: FPGA: Recv ZSGSRD 35288
17-03-17 17:38:00.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:00.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:00.868 -07 000000482 INF: FPGA: Recv ZSGSRD 35302
17-03-17 17:38:00.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:00.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:00.878 -07 000000433 INF: FPGA: Recv ZSGSRD 35292
17-03-17 17:38:00.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:00.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:00.888 -07 000000486 INF: FPGA: Recv ZSGSRD 35297
17-03-17 17:38:00.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:00.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:00.898 -07 000000631 INF: FPGA: Recv ZSGSRD 35292
17-03-17 17:38:00.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:00.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:00.908 -07 000000458 INF: FPGA: Recv ZSGSRD 35294
17-03-17 17:38:00.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:00.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:00.918 -07 000000433 INF: FPGA: Recv ZSGSRD 35299
17-03-17 17:38:00.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:00.928 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:00.928 -07 000000482 INF: FPGA: Recv ZPIEZORD 31045
17-03-17 17:38:00.938 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:00.938 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.568 V. Piezo Error = -9.4 V.
17-03-17 17:38:00.938 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35295 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35294 (-166.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35288 (-166.2 uncal um), Max = 35302 (-166.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 17:38:00.938 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35295, posNoise = 7, negNoise = 7
17-03-17 17:38:00.938 -07 000000610 INF: Z Motor: After move to -0.167050, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:00.938 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 17:38:00.938 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:00.938 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:00.938 -07 000000448 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:00.938 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:00.938 -07 000000433 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:00.938 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:00.938 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:00.938 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:00.938 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:00.938 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:00.938 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:38:00.938 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:00.948 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 17:38:00.948 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:38:00.948 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:00.948 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:00.958 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 17:38:00.958 -07 000000433 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 17:38:00.958 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:38:00.958 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 17:38:00.958 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 36668 150\n [Camera]
17-03-17 17:38:01.158 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:01.518 -07 000000448 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:01.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:01.548 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:01.548 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:01.548 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:01.548 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:01.548 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 17:38:01.548 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:01.548 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:01.548 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:01.548 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:01.548 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 17:38:01.738 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36668 775
17-03-17 17:38:01.888 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:01.928 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 17:38:01.928 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 17:38:01.928 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:01.928 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 17:38:01.928 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:38:01.928 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:01.928 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:01.928 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:01.928 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 17:38:01.938 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 17:38:02.078 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:02.078 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:02.078 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:02.078 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:02.078 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-17 17:38:02.078 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:02.078 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:02.078 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:02.078 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:02.078 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-17 17:38:02.268 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:38:02.268 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:02.268 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 36668 150' command took 2 ms to send, 1309 ms to get response, and 1315 ms overall
17-03-17 17:38:02.278 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:38:02.278 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51953125, Z-Position -0.167065919554588. ------
17-03-17 17:38:02.278 -07 000000482 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.17308 mm
17-03-17 17:38:02.278 -07 000000482 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:02.278 -07 000000608 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:02.288 -07 000000448 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-17 17:38:02.288 -07 000000448 INF: Y Motor: Moving to 72.3626 mm, started at 71.5195 mm, delta = 0.8431 mm
17-03-17 17:38:02.288 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:02.288 -07 000000458 INF: Z Motor: Entering MoveAbsStepped (DAC = 37810, sync = True, waitForSettling = False)
17-03-17 17:38:02.288 -07 000000458 INF: Z Motor: Moving to -0.173083 mm, started at -0.167066 mm, distance = -6.02 um
17-03-17 17:38:02.288 -07 000000631 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:02.288 -07 000000608 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 5 ms overall
17-03-17 17:38:02.288 -07 000000618 INF: FPGA: Recv YRDPOS 146473
17-03-17 17:38:02.298 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:02.298 -07 000000448 INF: Y Motor: Encoder = 146473 = motor step 114432.0 = 71.5200 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:02.298 -07 000000458 INF: FPGA: Xmit ZDACW 37810\n [Z Motor]
17-03-17 17:38:02.298 -07 000000442 INF: FPGA: Recv ZDACW
17-03-17 17:38:02.298 -07 000000448 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:02.298 -07 000000448 INF: Y Motor: Moving 1348 steps-27
17-03-17 17:38:02.308 -07 000000458 INF: FPGA: 'ZDACW 37810' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 17:38:02.308 -07 000000608 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:02.318 -07 000000448 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:02.328 -07 000000458 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:02.328 -07 000000618 INF: FPGA: Recv ZDACR 37810
17-03-17 17:38:02.338 -07 000000458 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:38:02.338 -07 000000458 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-17 17:38:02.458 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 17:38:02.458 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 17:38:02.458 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:02.458 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 17:38:02.458 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 17:38:02.458 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:02.468 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:02.468 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:38:02.468 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 17:38:02.468 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 17:38:02.508 -07 000000433 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:02.508 -07 000000608 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 220 ms overall
17-03-17 17:38:02.688 -07 000000458 INF: FPGA: Recv YMVTILE
17-03-17 17:38:02.688 -07 000000448 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-17 17:38:02.718 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:02.728 -07 000000475 INF: FPGA: Recv YRDPOS 148173
17-03-17 17:38:02.728 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 17:38:02.728 -07 000000448 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:02.728 -07 000000448 INF: Y Motor: Position error before settling (table move) = -26 encoder counts (-0.013 mm)
17-03-17 17:38:02.728 -07 000000448 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.843 mm, average velocity = 2.140 mm/sec
17-03-17 17:38:03.678 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:03.678 -07 000000608 INF: FPGA: Recv YRDPOS 148173
17-03-17 17:38:03.688 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:03.688 -07 000000448 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:03.708 -07 000000448 INF: Y Motor: After move to 72.362610, error = -0.012512, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:03.708 -07 000000448 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:38:03.708 -07 000000448 INF: Y Motor: Moved to 72.3501 after 1420 ms (table move)
17-03-17 17:38:03.708 -07 000000482 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173083 mm (DAC = 37810)
17-03-17 17:38:03.708 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:03.708 -07 000000433 INF: FPGA: Recv ZSGSRD 36230
17-03-17 17:38:03.718 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:38:03.718 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:03.718 -07 000000433 INF: FPGA: Recv ZSGSRD 36229
17-03-17 17:38:03.728 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:03.728 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:03.728 -07 000000631 INF: FPGA: Recv ZSGSRD 36237
17-03-17 17:38:03.738 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:03.738 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:03.738 -07 000000433 INF: FPGA: Recv ZSGSRD 36233
17-03-17 17:38:03.748 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:03.748 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:03.748 -07 000000631 INF: FPGA: Recv ZSGSRD 36230
17-03-17 17:38:03.758 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:03.758 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:03.758 -07 000000433 INF: FPGA: Recv ZSGSRD 36235
17-03-17 17:38:03.768 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:03.768 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:03.768 -07 000000631 INF: FPGA: Recv ZSGSRD 36235
17-03-17 17:38:03.778 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:03.778 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:03.778 -07 000000448 INF: FPGA: Recv ZSGSRD 36234
17-03-17 17:38:03.788 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:03.788 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:03.788 -07 000000547 INF: FPGA: Recv ZSGSRD 36231
17-03-17 17:38:03.798 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:03.798 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:03.798 -07 000000448 INF: FPGA: Recv ZSGSRD 36237
17-03-17 17:38:03.808 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:03.808 -07 000000482 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:03.808 -07 000000631 INF: FPGA: Recv ZPIEZORD 32329
17-03-17 17:38:03.818 -07 000000482 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:03.818 -07 000000482 INF: Z Motor: Piezo is near 49.1 V (nominally 0 to 100 V), expect near 57.7 V, since DAC is at 5.769 V. Piezo Error = -8.6 V.
17-03-17 17:38:03.818 -07 000000482 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.1 um, Read 10 ADC samples: Avg = 36233 (-172.2 uncal um), Error = 0.9 uncal um, Median = 36234 (-172.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 36229 (-172.2 uncal um), Max = 36237 (-172.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 17:38:03.818 -07 000000482 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36233, posNoise = 4, negNoise = 4
17-03-17 17:38:03.818 -07 000000482 INF: Z Motor: After move to -0.173083, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:03.818 -07 000000482 INF: Z Motor: Settle wait time = 1422 ms, measure time = 106 ms (allowed 150 ms), total time = 1528 ms
17-03-17 17:38:03.818 -07 000000482 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:03.868 -07 000000482 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1582 ms
17-03-17 17:38:03.868 -07 000000482 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:03.868 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:03.868 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:03.868 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:03.868 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:03.868 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:03.868 -07 000000475 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:03.868 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:38:03.868 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:03.878 -07 000000433 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.015368,
17-03-17 17:38:03.878 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:03.878 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:03.878 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 17:38:03.878 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-17 17:38:03.898 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:03.938 -07 000000631 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:04.138 -07 000000482 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:04.138 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:04.138 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:04.138 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2387972312, 0x0, 559484976) start.
17-03-17 17:38:04.178 -07 000000482 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:04.178 -07 000000448 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:04.178 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 275 ms to get response, and 293 ms overall
17-03-17 17:38:04.258 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2387972312, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 17:38:04.258 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:04.258 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:38:04.258 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 17:38:04.278 -07 000000475 INF: Autofocus start
17-03-17 17:38:04.278 -07 000000475 INF: MeasureProfile start
17-03-17 17:38:04.278 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:04.278 -07 000000631 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:04.288 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:38:04.288 -07 000000547 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:04.288 -07 000000475 INF: MeasureProfile done
17-03-17 17:38:04.288 -07 000000475 INF: X=-16  Z correction [um]=-0.1496812
17-03-17 17:38:04.288 -07 000000475 INF: Autofocus finished
17-03-17 17:38:04.488 -07 000000475 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:04.488 -07 000000547 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:38:04.488 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.35009765625, Z-position -0.17309183054356. ----------
17-03-17 17:38:04.498 -07 000000610 INF: Cycle	3	Tile	16	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:04.498 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36290, sync = True, waitForSettling = True)
17-03-17 17:38:04.498 -07 000000610 INF: Z Motor: Moving to -0.166125 mm, started at -0.173092 mm, distance = 6.97 um
17-03-17 17:38:04.498 -07 000000610 INF: FPGA: Xmit ZDACW 36290\n [Z Motor]
17-03-17 17:38:04.498 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 17:38:04.508 -07 000000610 INF: FPGA: 'ZDACW 36290' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:38:04.508 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:04.508 -07 000000482 INF: FPGA: Recv ZDACR 36290
17-03-17 17:38:04.518 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:04.518 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:04.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:04.668 -07 000000448 INF: FPGA: Recv ZSGSRD 35150
17-03-17 17:38:04.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:04.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:04.678 -07 000000433 INF: FPGA: Recv ZSGSRD 35151
17-03-17 17:38:04.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:04.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:04.688 -07 000000475 INF: FPGA: Recv ZSGSRD 35150
17-03-17 17:38:04.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:04.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:04.698 -07 000000482 INF: FPGA: Recv ZSGSRD 35146
17-03-17 17:38:04.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:04.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:04.708 -07 000000475 INF: FPGA: Recv ZSGSRD 35154
17-03-17 17:38:04.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:04.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:04.718 -07 000000482 INF: FPGA: Recv ZSGSRD 35151
17-03-17 17:38:04.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:04.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:04.728 -07 000000433 INF: FPGA: Recv ZSGSRD 35144
17-03-17 17:38:04.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:04.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:04.738 -07 000000482 INF: FPGA: Recv ZSGSRD 35154
17-03-17 17:38:04.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:04.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:04.748 -07 000000475 INF: FPGA: Recv ZSGSRD 35145
17-03-17 17:38:04.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:04.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:04.758 -07 000000631 INF: FPGA: Recv ZSGSRD 35150
17-03-17 17:38:04.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:04.768 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:04.768 -07 000000475 INF: FPGA: Recv ZPIEZORD 30866
17-03-17 17:38:04.778 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:04.778 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.537 V. Piezo Error = -9.4 V.
17-03-17 17:38:04.778 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.1 um, Read 10 ADC samples: Avg = 35150 (-165.3 uncal um), Error = 0.9 uncal um, Median = 35150 (-165.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35144 (-165.2 uncal um), Max = 35154 (-165.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 17:38:04.778 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35150, posNoise = 4, negNoise = 6
17-03-17 17:38:04.778 -07 000000610 INF: Z Motor: After move to -0.166125, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:04.778 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 17:38:04.778 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:04.778 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:04.778 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:04.778 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:04.778 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:04.778 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:04.778 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:04.778 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:04.778 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:38:04.778 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:04.778 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:38:04.778 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:04.778 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:38:04.778 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:04.778 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:38:04.778 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:04.788 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:38:04.788 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:38:04.798 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-17 17:38:04.798 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 17:38:04.798 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 36466 150\n [Camera]
17-03-17 17:38:04.998 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:05.388 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-17 17:38:05.388 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-17 17:38:05.388 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:05.388 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:05.388 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-17 17:38:05.388 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-17 17:38:05.388 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-17 17:38:05.388 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:05.388 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:05.388 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 17:38:05.578 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36466 775
17-03-17 17:38:05.728 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:05.768 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 17:38:05.768 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 17:38:05.768 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:05.768 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 17:38:05.768 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:38:05.768 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:05.768 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:05.768 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:05.768 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 17:38:05.778 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 17:38:05.918 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:05.918 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:05.918 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:06.058 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:06.058 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:06.058 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:06.058 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:06.058 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-17 17:38:06.068 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:06.068 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) start.
17-03-17 17:38:06.108 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:38:06.108 -07 000000433 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:06.108 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 36466 150' command took 2 ms to send, 1307 ms to get response, and 1312 ms overall
17-03-17 17:38:06.108 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:38:06.108 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.35009765625, Z-Position -0.166134408794033. ------
17-03-17 17:38:06.118 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:06.118 -07 000000627 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.17279 mm
17-03-17 17:38:06.118 -07 000000627 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:06.118 -07 000000541 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:06.118 -07 000000431 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-17 17:38:06.118 -07 000000431 INF: Y Motor: Moving to 73.1926 mm, started at 72.3501 mm, delta = 0.8425 mm
17-03-17 17:38:06.118 -07 000000631 INF: Z Motor: Entering MoveAbsStepped (DAC = 37745, sync = True, waitForSettling = False)
17-03-17 17:38:06.118 -07 000000631 INF: Z Motor: Moving to -0.172786 mm, started at -0.166134 mm, distance = -6.65 um
17-03-17 17:38:06.128 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:06.128 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:06.128 -07 000000433 INF: FPGA: Recv YRDPOS 148173
17-03-17 17:38:06.138 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 17:38:06.138 -07 000000431 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:06.138 -07 000000431 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:06.138 -07 000000431 INF: Y Motor: Moving 1348 steps-26
17-03-17 17:38:06.138 -07 000000618 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:06.148 -07 000000631 INF: FPGA: Xmit ZDACW 37745\n [Z Motor]
17-03-17 17:38:06.148 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 17:38:06.158 -07 000000431 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:06.158 -07 000000631 INF: FPGA: 'ZDACW 37745' command took 0 ms to send, 0 ms to get response, and 31 ms overall
17-03-17 17:38:06.168 -07 000000631 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:06.168 -07 000000482 INF: FPGA: Recv ZDACR 37745
17-03-17 17:38:06.178 -07 000000631 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:38:06.178 -07 000000631 INF: Z Motor: MoveAbsStepped took 51 ms (did NOT wait for settling yet))
17-03-17 17:38:06.338 -07 000000433 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:06.338 -07 000000618 INF: FPGA: 'FOCMRRFOC' command took 3 ms to send, 195 ms to get response, and 215 ms overall
17-03-17 17:38:06.458 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) end. Duration was 386 ms.
17-03-17 17:38:06.458 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 17:38:06.458 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:06.458 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 394 ms.
17-03-17 17:38:06.458 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 17:38:06.458 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:06.458 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:06.458 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:06.458 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 541 ms.
17-03-17 17:38:06.468 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 17:38:06.518 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:06.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:06.528 -07 000000448 INF: FPGA: Recv YMVTILE
17-03-17 17:38:06.528 -07 000000431 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-17 17:38:06.558 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:06.568 -07 000000482 INF: FPGA: Recv YRDPOS 149865
17-03-17 17:38:06.568 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 4 ms overall
17-03-17 17:38:06.568 -07 000000431 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:06.568 -07 000000431 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-17 17:38:06.568 -07 000000431 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.843 mm, average velocity = 2.133 mm/sec
17-03-17 17:38:07.518 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:07.518 -07 000000631 INF: FPGA: Recv YRDPOS 149865
17-03-17 17:38:07.528 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:07.528 -07 000000431 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:07.538 -07 000000431 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:07.538 -07 000000431 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:38:07.538 -07 000000431 INF: Y Motor: Moved to 73.1763 after 1420 ms (table move)
17-03-17 17:38:07.548 -07 000000627 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172786 mm (DAC = 37745)
17-03-17 17:38:07.548 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:07.548 -07 000000618 INF: FPGA: Recv ZSGSRD 36191
17-03-17 17:38:07.558 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:38:07.558 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:07.558 -07 000000631 INF: FPGA: Recv ZSGSRD 36183
17-03-17 17:38:07.568 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:07.568 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:07.568 -07 000000547 INF: FPGA: Recv ZSGSRD 36179
17-03-17 17:38:07.578 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:07.578 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:07.578 -07 000000409 INF: FPGA: Recv ZSGSRD 36187
17-03-17 17:38:07.588 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:07.588 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:07.588 -07 000000541 INF: FPGA: Recv ZSGSRD 36185
17-03-17 17:38:07.598 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:07.598 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:07.598 -07 000000631 INF: FPGA: Recv ZSGSRD 36191
17-03-17 17:38:07.608 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:07.608 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:07.608 -07 000000541 INF: FPGA: Recv ZSGSRD 36192
17-03-17 17:38:07.618 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:07.618 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:07.618 -07 000000475 INF: FPGA: Recv ZSGSRD 36193
17-03-17 17:38:07.628 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:07.628 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:07.628 -07 000000547 INF: FPGA: Recv ZSGSRD 36184
17-03-17 17:38:07.638 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:07.638 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:07.638 -07 000000448 INF: FPGA: Recv ZSGSRD 36181
17-03-17 17:38:07.648 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:07.648 -07 000000627 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:07.648 -07 000000626 INF: FPGA: Recv ZPIEZORD 32258
17-03-17 17:38:07.658 -07 000000627 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:07.658 -07 000000627 INF: Z Motor: Piezo is near 48.9 V (nominally 0 to 100 V), expect near 57.6 V, since DAC is at 5.760 V. Piezo Error = -8.7 V.
17-03-17 17:38:07.658 -07 000000627 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.8 um, Read 10 ADC samples: Avg = 36187 (-171.9 uncal um), Error = 0.9 uncal um, Median = 36186 (-171.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36179 (-171.9 uncal um), Max = 36193 (-172.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 17:38:07.658 -07 000000627 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36187, posNoise = 6, negNoise = 8
17-03-17 17:38:07.658 -07 000000627 INF: Z Motor: After move to -0.172786, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:07.658 -07 000000627 INF: Z Motor: Settle wait time = 1423 ms, measure time = 109 ms (allowed 150 ms), total time = 1532 ms
17-03-17 17:38:07.658 -07 000000627 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:07.708 -07 000000627 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1586 ms
17-03-17 17:38:07.708 -07 000000627 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:07.708 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:07.708 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:07.708 -07 000000409 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:07.708 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:07.708 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:07.708 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:07.708 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:07.708 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:07.718 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:07.718 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:07.718 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 17:38:07.718 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms.
17-03-17 17:38:07.728 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:07.768 -07 000000448 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:07.968 -07 000000541 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:07.968 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:07.968 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:07.968 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) start.
17-03-17 17:38:08.008 -07 000000626 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:08.008 -07 000000627 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:08.008 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 276 ms to get response, and 284 ms overall
17-03-17 17:38:08.088 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) end. Duration was 117 ms.
17-03-17 17:38:08.088 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:08.088 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:38:08.088 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-17 17:38:08.108 -07 000000501 INF: Autofocus start
17-03-17 17:38:08.108 -07 000000501 INF: MeasureProfile start
17-03-17 17:38:08.108 -07 000000475 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:08.108 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:08.118 -07 000000475 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:08.118 -07 000000475 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:08.118 -07 000000501 INF: MeasureProfile done
17-03-17 17:38:08.118 -07 000000501 INF: X=-16  Z correction [um]=-0.1496812
17-03-17 17:38:08.118 -07 000000501 INF: Autofocus finished
17-03-17 17:38:08.318 -07 000000627 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:08.318 -07 000000475 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:38:08.318 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.172796316785039. ----------
17-03-17 17:38:08.328 -07 000000610 INF: Cycle	3	Tile	17	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:08.328 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36225, sync = True, waitForSettling = True)
17-03-17 17:38:08.328 -07 000000610 INF: Z Motor: Moving to -0.165827 mm, started at -0.172796 mm, distance = 6.97 um
17-03-17 17:38:08.328 -07 000000610 INF: FPGA: Xmit ZDACW 36225\n [Z Motor]
17-03-17 17:38:08.328 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 17:38:08.338 -07 000000610 INF: FPGA: 'ZDACW 36225' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:38:08.338 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:08.338 -07 000000623 INF: FPGA: Recv ZDACR 36225
17-03-17 17:38:08.348 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:08.348 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:08.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:08.498 -07 000000541 INF: FPGA: Recv ZSGSRD 35104
17-03-17 17:38:08.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:08.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:08.508 -07 000000448 INF: FPGA: Recv ZSGSRD 35109
17-03-17 17:38:08.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:08.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:08.518 -07 000000475 INF: FPGA: Recv ZSGSRD 35106
17-03-17 17:38:08.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:08.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:08.528 -07 000000409 INF: FPGA: Recv ZSGSRD 35099
17-03-17 17:38:08.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:08.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:08.538 -07 000000541 INF: FPGA: Recv ZSGSRD 35098
17-03-17 17:38:08.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:08.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:08.548 -07 000000448 INF: FPGA: Recv ZSGSRD 35115
17-03-17 17:38:08.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:08.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:08.558 -07 000000475 INF: FPGA: Recv ZSGSRD 35105
17-03-17 17:38:08.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:08.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:08.568 -07 000000431 INF: FPGA: Recv ZSGSRD 35099
17-03-17 17:38:08.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:08.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:08.578 -07 000000431 INF: FPGA: Recv ZSGSRD 35104
17-03-17 17:38:08.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:08.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:08.598 -07 000000631 INF: FPGA: Recv ZSGSRD 35109
17-03-17 17:38:08.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:38:08.608 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:08.608 -07 000000429 INF: FPGA: Recv ZPIEZORD 30804
17-03-17 17:38:08.618 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:08.618 -07 000000610 INF: Z Motor: Piezo is near 45.8 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.528 V. Piezo Error = -9.5 V.
17-03-17 17:38:08.618 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.8 um, Read 10 ADC samples: Avg = 35105 (-165.0 uncal um), Error = 0.8 uncal um, Median = 35104 (-165.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35098 (-164.9 uncal um), Max = 35115 (-165.0 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 17:38:08.618 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35105, posNoise = 10, negNoise = 7
17-03-17 17:38:08.618 -07 000000610 INF: Z Motor: After move to -0.165827, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:08.618 -07 000000610 INF: Z Motor: MoveAbsStepped took 285 ms)
17-03-17 17:38:08.618 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:08.618 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:08.618 -07 000000631 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:08.618 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:08.618 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:08.618 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:08.618 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:08.618 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:08.618 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:08.618 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:08.618 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:38:08.618 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:08.628 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:38:08.628 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:08.628 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:38:08.628 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:08.638 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 17:38:08.638 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 17:38:08.638 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:38:08.638 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 17:38:08.638 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 36402 150\n [Camera]
17-03-17 17:38:08.838 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:09.228 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:09.228 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:09.228 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:09.228 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:09.228 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:09.228 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:09.348 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:09.348 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 17:38:09.358 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:09.358 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-17 17:38:09.358 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.008536,
17-03-17 17:38:09.418 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36402 775
17-03-17 17:38:09.568 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:09.728 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 374 ms.
17-03-17 17:38:09.728 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-17 17:38:09.728 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:09.728 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 370 ms.
17-03-17 17:38:09.728 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 17:38:09.728 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:09.728 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:09.728 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 503 ms.
17-03-17 17:38:09.728 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:09.738 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 508 ms.
17-03-17 17:38:09.758 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:09.758 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:09.758 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:09.758 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:09.758 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:09.758 -07 000000631 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:09.758 -07 000000631 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:09.758 -07 000000631 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) start.
17-03-17 17:38:09.768 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:09.768 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1051332656, 0x0, 391868352) start.
17-03-17 17:38:09.948 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:38:09.948 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:09.948 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 36402 150' command took 2 ms to send, 1306 ms to get response, and 1312 ms overall
17-03-17 17:38:09.948 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:38:09.948 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 18 at Y-position 73.17626953125, Z-Position -0.165845319247653. ------
17-03-17 17:38:09.958 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:09.958 -07 000000429 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:09.958 -07 000000431 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.17215 mm
17-03-17 17:38:09.958 -07 000000431 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:09.958 -07 000000475 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-17 17:38:09.958 -07 000000475 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-17 17:38:09.958 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 37607, sync = True, waitForSettling = False)
17-03-17 17:38:09.958 -07 000000618 INF: Z Motor: Moving to -0.172154 mm, started at -0.165845 mm, distance = -6.31 um
17-03-17 17:38:09.968 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:09.968 -07 000000618 INF: FPGA: Xmit ZDACW 37607\n [Z Motor]
17-03-17 17:38:09.968 -07 000000608 INF: FPGA: Recv ZDACW
17-03-17 17:38:09.978 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:09.978 -07 000000618 INF: FPGA: 'ZDACW 37607' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:09.978 -07 000000482 INF: FPGA: Recv YRDPOS 149865
17-03-17 17:38:09.988 -07 000000627 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:09.988 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-17 17:38:09.988 -07 000000475 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:09.988 -07 000000475 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:09.988 -07 000000475 INF: Y Motor: Moving 1354 steps-33
17-03-17 17:38:09.998 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:09.998 -07 000000626 INF: FPGA: Recv ZDACR 37607
17-03-17 17:38:10.008 -07 000000475 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:10.008 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:38:10.008 -07 000000618 INF: Z Motor: MoveAbsStepped took 41 ms (did NOT wait for settling yet))
17-03-17 17:38:10.138 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1051332656, 0x0, 391868352) end. Duration was 375 ms.
17-03-17 17:38:10.138 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-17 17:38:10.138 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:10.138 -07 000000631 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 17:38:10.138 -07 000000631 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 17:38:10.138 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:10.148 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:38:10.148 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:38:10.148 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 17:38:10.148 -07 000000631 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 17:38:10.188 -07 000000409 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:10.188 -07 000000627 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 223 ms overall
17-03-17 17:38:10.378 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-17 17:38:10.378 -07 000000475 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 17:38:10.408 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:10.408 -07 000000626 INF: FPGA: Recv YRDPOS 151570
17-03-17 17:38:10.418 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:38:10.418 -07 000000475 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:10.418 -07 000000475 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 17:38:10.418 -07 000000475 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.846 mm, average velocity = 2.132 mm/sec
17-03-17 17:38:11.368 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:11.368 -07 000000424 INF: FPGA: Recv YRDPOS 151570
17-03-17 17:38:11.378 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:11.378 -07 000000475 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:11.388 -07 000000475 INF: Y Motor: After move to 74.022606, error = -0.013817, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:11.388 -07 000000475 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:38:11.388 -07 000000475 INF: Y Motor: Moved to 74.0088 after 1425 ms (table move)
17-03-17 17:38:11.388 -07 000000431 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172154 mm (DAC = 37607)
17-03-17 17:38:11.388 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:11.398 -07 000000409 INF: FPGA: Recv ZSGSRD 36090
17-03-17 17:38:11.398 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 17:38:11.398 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:11.398 -07 000000626 INF: FPGA: Recv ZSGSRD 36092
17-03-17 17:38:11.408 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:11.408 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:11.408 -07 000000429 INF: FPGA: Recv ZSGSRD 36081
17-03-17 17:38:11.418 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:11.418 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:11.418 -07 000000627 INF: FPGA: Recv ZSGSRD 36088
17-03-17 17:38:11.428 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:11.428 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:11.428 -07 000000442 INF: FPGA: Recv ZSGSRD 36091
17-03-17 17:38:11.438 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:11.438 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:11.438 -07 000000475 INF: FPGA: Recv ZSGSRD 36088
17-03-17 17:38:11.448 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:11.448 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:11.448 -07 000000429 INF: FPGA: Recv ZSGSRD 36091
17-03-17 17:38:11.458 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:11.458 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:11.458 -07 000000409 INF: FPGA: Recv ZSGSRD 36094
17-03-17 17:38:11.468 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:11.468 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:11.468 -07 000000458 INF: FPGA: Recv ZSGSRD 36089
17-03-17 17:38:11.478 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:11.478 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:11.478 -07 000000608 INF: FPGA: Recv ZSGSRD 36091
17-03-17 17:38:11.488 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:11.488 -07 000000431 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:11.488 -07 000000482 INF: FPGA: Recv ZPIEZORD 32125
17-03-17 17:38:11.498 -07 000000431 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:11.498 -07 000000431 INF: Z Motor: Piezo is near 48.6 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.738 V. Piezo Error = -8.8 V.
17-03-17 17:38:11.498 -07 000000431 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36090 (-171.3 uncal um), Error = 0.9 uncal um, Median = 36090 (-171.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36081 (-171.2 uncal um), Max = 36094 (-171.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 17:38:11.498 -07 000000431 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36090, posNoise = 4, negNoise = 9
17-03-17 17:38:11.498 -07 000000431 INF: Z Motor: After move to -0.172154, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:11.498 -07 000000431 INF: Z Motor: Settle wait time = 1428 ms, measure time = 103 ms (allowed 150 ms), total time = 1531 ms
17-03-17 17:38:11.498 -07 000000431 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:11.518 -07 000000541 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:11.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:11.548 -07 000000431 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-17 17:38:11.548 -07 000000431 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:11.548 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:11.548 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:11.548 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:11.548 -07 000000627 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:11.548 -07 000000409 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:11.548 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:11.548 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:11.548 -07 000000627 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:11.558 -07 000000627 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:11.558 -07 000000627 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:11.568 -07 000000627 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 17:38:11.568 -07 000000627 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-17 17:38:11.568 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:11.618 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:11.818 -07 000000433 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:11.818 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:11.818 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:11.818 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) start.
17-03-17 17:38:11.858 -07 000000631 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:11.858 -07 000000433 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:11.858 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 285 ms to get response, and 287 ms overall
17-03-17 17:38:11.948 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) end. Duration was 124 ms.
17-03-17 17:38:11.948 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:11.948 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:38:11.948 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 127 ms.
17-03-17 17:38:11.958 -07 000000608 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:11.958 -07 000000482 INF: Autofocus start
17-03-17 17:38:11.958 -07 000000482 INF: MeasureProfile start
17-03-17 17:38:11.958 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:11.968 -07 000000608 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:11.968 -07 000000608 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:11.968 -07 000000482 INF: MeasureProfile done
17-03-17 17:38:11.968 -07 000000482 INF: X=32  Z correction [um]=0.09220707
17-03-17 17:38:11.968 -07 000000482 INF: Autofocus finished
17-03-17 17:38:12.168 -07 000000431 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:12.168 -07 000000608 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:38:12.168 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0087890625, Z-position -0.172173168207288. ----------
17-03-17 17:38:12.168 -07 000000610 INF: Cycle	3	Tile	18	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:12.178 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36140, sync = True, waitForSettling = True)
17-03-17 17:38:12.178 -07 000000610 INF: Z Motor: Moving to -0.165438 mm, started at -0.172173 mm, distance = 6.73 um
17-03-17 17:38:12.178 -07 000000610 INF: FPGA: Xmit ZDACW 36140\n [Z Motor]
17-03-17 17:38:12.178 -07 000000486 INF: FPGA: Recv ZDACW
17-03-17 17:38:12.188 -07 000000610 INF: FPGA: 'ZDACW 36140' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.188 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:12.188 -07 000000429 INF: FPGA: Recv ZDACR 36140
17-03-17 17:38:12.198 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.198 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:12.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:12.348 -07 000000541 INF: FPGA: Recv ZSGSRD 35047
17-03-17 17:38:12.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:12.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:12.358 -07 000000458 INF: FPGA: Recv ZSGSRD 35045
17-03-17 17:38:12.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:12.368 -07 000000627 INF: FPGA: Recv ZSGSRD 35041
17-03-17 17:38:12.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:12.378 -07 000000608 INF: FPGA: Recv ZSGSRD 35046
17-03-17 17:38:12.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:12.388 -07 000000626 INF: FPGA: Recv ZSGSRD 35039
17-03-17 17:38:12.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:12.398 -07 000000631 INF: FPGA: Recv ZSGSRD 35046
17-03-17 17:38:12.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:12.408 -07 000000627 INF: FPGA: Recv ZSGSRD 35040
17-03-17 17:38:12.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:12.418 -07 000000608 INF: FPGA: Recv ZSGSRD 35045
17-03-17 17:38:12.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:12.428 -07 000000475 INF: FPGA: Recv ZSGSRD 35045
17-03-17 17:38:12.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:12.438 -07 000000442 INF: FPGA: Recv ZSGSRD 35042
17-03-17 17:38:12.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.448 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:12.448 -07 000000482 INF: FPGA: Recv ZPIEZORD 30768
17-03-17 17:38:12.458 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:12.458 -07 000000610 INF: Z Motor: Piezo is near 45.7 V (nominally 0 to 100 V), expect near 55.1 V, since DAC is at 5.515 V. Piezo Error = -9.4 V.
17-03-17 17:38:12.458 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.4 um, Read 10 ADC samples: Avg = 35044 (-164.6 uncal um), Error = 0.8 uncal um, Median = 35045 (-164.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35039 (-164.6 uncal um), Max = 35047 (-164.6 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:38:12.458 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35044, posNoise = 3, negNoise = 5
17-03-17 17:38:12.458 -07 000000610 INF: Z Motor: After move to -0.165438, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:12.458 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 17:38:12.458 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:12.458 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:12.458 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:12.458 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:12.458 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:12.458 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:12.458 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:12.458 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:12.458 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:38:12.458 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:12.458 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:12.458 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:12.468 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:38:12.468 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:12.468 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:12.468 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:12.478 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 17:38:12.478 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:38:12.478 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:38:12.478 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:38:12.478 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 36317 150\n [Camera]
17-03-17 17:38:12.678 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-17 17:38:13.068 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:13.068 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:13.068 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:13.068 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:13.068 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1143991736, 0x0, 391868352) start.
17-03-17 17:38:13.068 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:13.068 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:13.068 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:13.068 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:13.068 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 17:38:13.258 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36317 775
17-03-17 17:38:13.408 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:13.458 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 383 ms.
17-03-17 17:38:13.458 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 17:38:13.458 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:13.458 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1143991736, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 17:38:13.458 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 17:38:13.458 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:13.458 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:38:13.458 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:38:13.458 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 17:38:13.468 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 17:38:13.598 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:13.598 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:13.598 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:13.598 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:13.598 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 17:38:13.598 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:13.598 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:13.608 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:13.608 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:13.608 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:38:13.788 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:38:13.788 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:13.788 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 36317 150' command took 4 ms to send, 1308 ms to get response, and 1314 ms overall
17-03-17 17:38:13.798 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 17:38:13.798 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.0087890625, Z-Position -0.165453442307006. ------
17-03-17 17:38:13.798 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:13.798 -07 000000501 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.17172 mm
17-03-17 17:38:13.798 -07 000000501 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:13.978 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 17:38:13.978 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 17:38:13.978 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:13.978 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:13.978 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 17:38:13.978 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 17:38:13.978 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:13.988 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 17:38:13.988 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 17:38:13.988 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 17:38:13.998 -07 000000431 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:13.998 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 196 ms to get response, and 200 ms overall
17-03-17 17:38:13.998 -07 000000627 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:13.998 -07 000000486 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-17 17:38:13.998 -07 000000486 INF: Y Motor: Moving to 74.8526 mm, started at 74.0088 mm, delta = 0.8438 mm
17-03-17 17:38:13.998 -07 000000431 INF: Z Motor: Entering MoveAbsStepped (DAC = 37512, sync = True, waitForSettling = False)
17-03-17 17:38:13.998 -07 000000431 INF: Z Motor: Moving to -0.171719 mm, started at -0.165453 mm, distance = -6.27 um
17-03-17 17:38:14.008 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:14.018 -07 000000431 INF: FPGA: Xmit ZDACW 37512\n [Z Motor]
17-03-17 17:38:14.758 -07 000000623 INF: FPGA: Recv YRDPOS 151570
17-03-17 17:38:14.758 -07 000000623 INF: FPGA: Recv ZDACW
17-03-17 17:38:14.758 -07 000000623 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:14.758 -07 000000627 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 750 ms to get response, and 754 ms overall
17-03-17 17:38:14.758 -07 000000431 INF: FPGA: 'ZDACW 37512' command took 0 ms to send, 730 ms to get response, and 752 ms overall
17-03-17 17:38:14.758 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 740 ms to get response, and 753 ms overall
17-03-17 17:38:14.758 -07 000000486 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:14.758 -07 000000486 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:14.758 -07 000000486 INF: Y Motor: Moving 1350 steps-28
17-03-17 17:38:14.768 -07 000000486 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:14.778 -07 000000431 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:14.778 -07 000000627 INF: FPGA: Recv ZDACR 37512
17-03-17 17:38:14.788 -07 000000431 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-17 17:38:14.788 -07 000000431 INF: Z Motor: MoveAbsStepped took 782 ms (did NOT wait for settling yet))
17-03-17 17:38:15.068 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.000345,
17-03-17 17:38:15.138 -07 000000431 INF: FPGA: Recv YMVTILE
17-03-17 17:38:15.138 -07 000000486 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-17 17:38:15.158 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:15.168 -07 000000627 INF: FPGA: Recv YRDPOS 153256
17-03-17 17:38:15.168 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 17:38:15.168 -07 000000486 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:15.168 -07 000000486 INF: Y Motor: Position error before settling (table move) = -42 encoder counts (-0.021 mm)
17-03-17 17:38:15.168 -07 000000486 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.844 mm, average velocity = 2.186 mm/sec
17-03-17 17:38:16.118 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:16.118 -07 000000424 INF: FPGA: Recv YRDPOS 153257
17-03-17 17:38:16.128 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:16.128 -07 000000486 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:16.138 -07 000000486 INF: Y Motor: After move to 74.852608, error = -0.020088, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:16.138 -07 000000486 INF: Y Motor: Position error after settling (table move) = -41 encoder counts (-0.020 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 17:38:16.138 -07 000000486 INF: Y Motor: Moved to 74.8325 after 2136 ms (table move)
17-03-17 17:38:16.138 -07 000000501 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171719 mm (DAC = 37512)
17-03-17 17:38:16.138 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:16.148 -07 000000424 INF: FPGA: Recv ZSGSRD 36020
17-03-17 17:38:16.148 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 17:38:16.148 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:16.148 -07 000000431 INF: FPGA: Recv ZSGSRD 36026
17-03-17 17:38:16.158 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:16.158 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:16.158 -07 000000623 INF: FPGA: Recv ZSGSRD 36018
17-03-17 17:38:16.168 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:16.168 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:16.168 -07 000000618 INF: FPGA: Recv ZSGSRD 36018
17-03-17 17:38:16.178 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:16.178 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:16.178 -07 000000431 INF: FPGA: Recv ZSGSRD 36027
17-03-17 17:38:16.188 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:16.188 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:16.188 -07 000000618 INF: FPGA: Recv ZSGSRD 36025
17-03-17 17:38:16.198 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:16.198 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:16.198 -07 000000431 INF: FPGA: Recv ZSGSRD 36018
17-03-17 17:38:16.208 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:16.208 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:16.208 -07 000000424 INF: FPGA: Recv ZSGSRD 36027
17-03-17 17:38:16.218 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:16.218 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:16.218 -07 000000618 INF: FPGA: Recv ZSGSRD 36024
17-03-17 17:38:16.228 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:16.228 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:16.228 -07 000000424 INF: FPGA: Recv ZSGSRD 36024
17-03-17 17:38:16.238 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:16.238 -07 000000501 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:16.238 -07 000000618 INF: FPGA: Recv ZPIEZORD 32053
17-03-17 17:38:16.248 -07 000000501 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:16.248 -07 000000501 INF: Z Motor: Piezo is near 48.5 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.724 V. Piezo Error = -8.8 V.
17-03-17 17:38:16.248 -07 000000501 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.7 um, Read 10 ADC samples: Avg = 36023 (-170.9 uncal um), Error = 0.9 uncal um, Median = 36024 (-170.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 36018 (-170.8 uncal um), Max = 36027 (-170.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:38:16.248 -07 000000501 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36023, posNoise = 4, negNoise = 5
17-03-17 17:38:16.248 -07 000000501 INF: Z Motor: After move to -0.171719, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:16.248 -07 000000501 INF: Z Motor: Settle wait time = 2139 ms, measure time = 103 ms (allowed 150 ms), total time = 2242 ms
17-03-17 17:38:16.248 -07 000000501 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:16.298 -07 000000501 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2494 ms
17-03-17 17:38:16.298 -07 000000501 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:16.298 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:16.298 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:16.298 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:16.298 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:16.298 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:16.298 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:16.298 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:38:16.298 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:16.308 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:16.308 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:16.308 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-17 17:38:16.308 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-17 17:38:16.318 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:16.358 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:16.518 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:16.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:16.558 -07 000000627 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:16.558 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:16.558 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:16.558 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2270629648, 0x0, 559484976) start.
17-03-17 17:38:16.598 -07 000000424 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:16.598 -07 000000501 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:16.598 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 276 ms to get response, and 285 ms overall
17-03-17 17:38:16.678 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2270629648, 0x0, 559484976) end. Duration was 116 ms.
17-03-17 17:38:16.678 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:16.678 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:38:16.678 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-17 17:38:16.698 -07 000000486 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:16.698 -07 000000424 INF: Autofocus start
17-03-17 17:38:16.698 -07 000000424 INF: MeasureProfile start
17-03-17 17:38:16.698 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:16.708 -07 000000486 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:16.708 -07 000000486 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:16.708 -07 000000424 INF: MeasureProfile done
17-03-17 17:38:16.708 -07 000000424 INF: X=16  Z correction [um]=0.01042744
17-03-17 17:38:16.708 -07 000000424 INF: Autofocus finished
17-03-17 17:38:16.908 -07 000000627 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:16.908 -07 000000486 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 204 ms overall
17-03-17 17:38:16.918 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83251953125, Z-position -0.17174274599379. ----------
17-03-17 17:38:16.918 -07 000000610 INF: Cycle	3	Tile	19	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:16.918 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36027, sync = True, waitForSettling = True)
17-03-17 17:38:16.918 -07 000000610 INF: Z Motor: Moving to -0.164921 mm, started at -0.171743 mm, distance = 6.82 um
17-03-17 17:38:16.918 -07 000000610 INF: FPGA: Xmit ZDACW 36027\n [Z Motor]
17-03-17 17:38:16.918 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 17:38:16.928 -07 000000610 INF: FPGA: 'ZDACW 36027' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:16.928 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:16.928 -07 000000431 INF: FPGA: Recv ZDACR 36027
17-03-17 17:38:16.938 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:16.938 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:17.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:17.088 -07 000000424 INF: FPGA: Recv ZSGSRD 34962
17-03-17 17:38:17.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:17.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:17.098 -07 000000431 INF: FPGA: Recv ZSGSRD 34962
17-03-17 17:38:17.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:17.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:17.108 -07 000000424 INF: FPGA: Recv ZSGSRD 34960
17-03-17 17:38:17.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:17.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:17.118 -07 000000501 INF: FPGA: Recv ZSGSRD 34962
17-03-17 17:38:17.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:17.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:17.128 -07 000000424 INF: FPGA: Recv ZSGSRD 34964
17-03-17 17:38:17.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:17.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:17.138 -07 000000431 INF: FPGA: Recv ZSGSRD 34964
17-03-17 17:38:17.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:17.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:17.148 -07 000000486 INF: FPGA: Recv ZSGSRD 34961
17-03-17 17:38:17.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:17.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:17.158 -07 000000431 INF: FPGA: Recv ZSGSRD 34969
17-03-17 17:38:17.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:17.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:17.168 -07 000000618 INF: FPGA: Recv ZSGSRD 34962
17-03-17 17:38:17.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:17.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:17.178 -07 000000431 INF: FPGA: Recv ZSGSRD 34961
17-03-17 17:38:17.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:17.188 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:17.188 -07 000000618 INF: FPGA: Recv ZPIEZORD 30646
17-03-17 17:38:17.198 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:17.198 -07 000000610 INF: Z Motor: Piezo is near 45.5 V (nominally 0 to 100 V), expect near 55.0 V, since DAC is at 5.497 V. Piezo Error = -9.5 V.
17-03-17 17:38:17.198 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -164.9 um, Read 10 ADC samples: Avg = 34963 (-164.1 uncal um), Error = 0.9 uncal um, Median = 34962 (-164.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 34960 (-164.1 uncal um), Max = 34969 (-164.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 17:38:17.198 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34963, posNoise = 6, negNoise = 3
17-03-17 17:38:17.198 -07 000000610 INF: Z Motor: After move to -0.164921, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:17.198 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-17 17:38:17.198 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:17.198 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:17.198 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:17.198 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:17.198 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:17.198 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:17.198 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:17.198 -07 000000486 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:17.198 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:38:17.198 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:17.198 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:17.198 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:17.198 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:38:17.198 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:17.198 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:17.198 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:17.208 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:38:17.208 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:38:17.208 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 17:38:17.208 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:38:17.218 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 36204 150\n [Camera]
17-03-17 17:38:17.418 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:17.808 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:17.808 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:17.808 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:17.808 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:17.808 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1428998304, 0x0, 391868352) start.
17-03-17 17:38:17.808 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:17.808 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:17.808 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:17.808 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:17.808 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1464420568, 0x0, 418435064) start.
17-03-17 17:38:17.998 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36204 775
17-03-17 17:38:18.148 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:18.198 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1464420568, 0x0, 418435064) end. Duration was 389 ms.
17-03-17 17:38:18.208 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 17:38:18.208 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:18.208 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1428998304, 0x0, 391868352) end. Duration was 392 ms.
17-03-17 17:38:18.208 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-17 17:38:18.208 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:18.208 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:18.208 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:18.208 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-17 17:38:18.218 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-17 17:38:18.338 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:18.338 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:18.338 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:18.338 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:18.338 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 17:38:18.338 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:18.338 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:18.338 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:18.338 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:18.338 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 17:38:18.528 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:38:18.528 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:18.528 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 36204 150' command took 2 ms to send, 1303 ms to get response, and 1312 ms overall
17-03-17 17:38:18.738 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 405 ms.
17-03-17 17:38:18.738 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-17 17:38:18.738 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:18.738 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 403 ms.
17-03-17 17:38:18.738 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 17:38:18.738 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:18.748 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:18.748 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:38:18.748 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 413 ms.
17-03-17 17:38:18.748 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-17 17:38:18.748 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-17 17:38:18.878 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 124 ms.
17-03-17 17:38:18.878 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-17 17:38:18.918 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms.
17-03-17 17:38:18.918 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-17 17:38:18.918 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-17 17:38:18.918 -07 000000547 INF: FPGA: Recv EMCUR 
17-03-17 17:38:18.928 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:38:18.928 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-17 17:38:19.428 -07 000000547 INF: FPGA: Recv EMIN
17-03-17 17:38:19.428 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-17 17:38:19.428 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-17 17:38:19.428 -07 000000424 INF: FPGA: Recv EMCUR 
17-03-17 17:38:19.438 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:19.438 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:38:19.438 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83251953125, Z-Position -0.164933081123523. ------
17-03-17 17:38:19.438 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:19.438 -07 000000618 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13917 mm
17-03-17 17:38:19.438 -07 000000618 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:19.438 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:19.448 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:38:19.448 -07 000000627 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:19.448 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-17 17:38:19.448 -07 000000501 INF: Y Motor: Moving to 59.9126 mm, started at 74.8325 mm, delta = -14.9199 mm
17-03-17 17:38:19.448 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 30402, sync = True, waitForSettling = False)
17-03-17 17:38:19.448 -07 000000547 INF: Z Motor: Moving to -0.139171 mm, started at -0.164933 mm, distance = 25.76 um
17-03-17 17:38:19.458 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:19.458 -07 000000424 INF: FPGA: Recv YRDPOS 153258
17-03-17 17:38:19.468 -07 000000547 INF: FPGA: Xmit ZDACW 30402\n [Z Motor]
17-03-17 17:38:19.468 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 17:38:19.468 -07 000000501 INF: Y Motor: Encoder = 153258 = motor step 119732.8 = 74.8330 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:19.468 -07 000000501 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-17 17:38:19.468 -07 000000501 INF: Y Motor: Moving to 122701 encoder counts
17-03-17 17:38:19.478 -07 000000501 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-17 17:38:20.248 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 17:38:20.248 -07 000000482 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:20.248 -07 000000627 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 790 ms to get response, and 800 ms overall
17-03-17 17:38:20.248 -07 000000547 INF: FPGA: 'ZDACW 30402' command took 0 ms to send, 770 ms to get response, and 799 ms overall
17-03-17 17:38:20.248 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:20.248 -07 000000482 INF: FPGA: Recv ZDACR 30402
17-03-17 17:38:20.258 -07 000000547 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:20.258 -07 000000547 INF: Z Motor: MoveAbsStepped took 808 ms (did NOT wait for settling yet))
17-03-17 17:38:20.558 -07 000000482 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 3.989471,
17-03-17 17:38:21.108 -07 000000482 INF: FPGA: Recv YMVTO 122702 23904
17-03-17 17:38:21.108 -07 000000501 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1620 ms to get response, and 1638 ms overall
17-03-17 17:38:21.108 -07 000000501 INF: Y Motor: Position error before settling = 1 encoder counts (0.000 mm)
17-03-17 17:38:21.108 -07 000000501 INF: Y Motor: To move from 74.833 to 59.913 (-14.920 mm) should take 23873 steps, but required 23904 steps (14.940 mm). Slippage = 0.019 mm (0.00%).
17-03-17 17:38:21.108 -07 000000501 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1638 ms, distance = 14.920 mm, average velocity = 9.109 mm/sec
17-03-17 17:38:21.518 -07 000000541 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:21.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:23.958 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:23.958 -07 000000482 INF: FPGA: Recv YRDPOS 122699
17-03-17 17:38:23.968 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:23.968 -07 000000501 INF: Y Motor: Encoder = 122699 = motor step 95858.6 = 59.9116 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:23.988 -07 000000501 INF: Y Motor: After move to 59.912609, error = -0.000988, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:23.988 -07 000000501 INF: Y Motor: Position error after settling = -2 encoder counts (-0.001 mm), Delta during settling = -3 counts (-0.001 mm)
17-03-17 17:38:23.988 -07 000000501 INF: Y Motor: Moved to 59.9116 after 4543 ms
17-03-17 17:38:23.988 -07 000000618 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139171 mm (DAC = 30402)
17-03-17 17:38:23.988 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:23.998 -07 000000482 INF: FPGA: Recv ZSGSRD 30958
17-03-17 17:38:23.998 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 17:38:23.998 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:23.998 -07 000000631 INF: FPGA: Recv ZSGSRD 30955
17-03-17 17:38:24.008 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:24.008 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.008 -07 000000541 INF: FPGA: Recv ZSGSRD 30952
17-03-17 17:38:24.018 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.018 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.018 -07 000000547 INF: FPGA: Recv ZSGSRD 30956
17-03-17 17:38:24.028 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.028 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.028 -07 000000482 INF: FPGA: Recv ZSGSRD 30955
17-03-17 17:38:24.038 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.038 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.038 -07 000000631 INF: FPGA: Recv ZSGSRD 30955
17-03-17 17:38:24.048 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.048 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.048 -07 000000547 INF: FPGA: Recv ZSGSRD 30956
17-03-17 17:38:24.058 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.058 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.058 -07 000000482 INF: FPGA: Recv ZSGSRD 30951
17-03-17 17:38:24.068 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.068 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.068 -07 000000547 INF: FPGA: Recv ZSGSRD 30955
17-03-17 17:38:24.078 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.078 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.078 -07 000000541 INF: FPGA: Recv ZSGSRD 30953
17-03-17 17:38:24.088 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.088 -07 000000618 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:24.088 -07 000000631 INF: FPGA: Recv ZPIEZORD 26465
17-03-17 17:38:24.098 -07 000000618 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.098 -07 000000618 INF: Z Motor: Piezo is near 36.5 V (nominally 0 to 100 V), expect near 46.4 V, since DAC is at 4.639 V. Piezo Error = -9.9 V.
17-03-17 17:38:24.098 -07 000000618 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.2 um, Read 10 ADC samples: Avg = 30955 (-138.4 uncal um), Error = 0.8 uncal um, Median = 30955 (-138.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 30951 (-138.4 uncal um), Max = 30958 (-138.4 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 17:38:24.098 -07 000000618 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30955, posNoise = 3, negNoise = 4
17-03-17 17:38:24.098 -07 000000618 INF: Z Motor: After move to -0.139171, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:24.098 -07 000000618 INF: Z Motor: Settle wait time = 4547 ms, measure time = 102 ms (allowed 150 ms), total time = 4649 ms
17-03-17 17:38:24.098 -07 000000618 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:24.148 -07 000000618 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4704 ms
17-03-17 17:38:24.148 -07 000000618 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:24.148 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:24.148 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:24.148 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:24.148 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:24.148 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:24.148 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:24.148 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:24.148 -07 000000482 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-17 17:38:24.178 -07 000000482 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 24 ms.
17-03-17 17:38:24.178 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:24.178 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-17 17:38:24.178 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:24.188 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-17 17:38:24.188 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 38 ms.
17-03-17 17:38:24.188 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:24.238 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:24.438 -07 000000631 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:24.438 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:24.438 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:24.438 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-17 17:38:24.478 -07 000000618 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:24.478 -07 000000627 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:24.478 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 283 ms to get response, and 285 ms overall
17-03-17 17:38:24.568 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 17:38:24.568 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:24.568 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:38:24.568 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 17:38:24.578 -07 000000631 INF: Image SNR check: start
17-03-17 17:38:24.578 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:24.578 -07 000000541 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:24.588 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:24.588 -07 000000627 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:24.588 -07 000000631 INF: Image SNR check: pass  [peak (Max-Min)=71.97]
17-03-17 17:38:24.588 -07 000000631 INF: Autofocus start
17-03-17 17:38:24.588 -07 000000631 INF: MeasureProfile start
17-03-17 17:38:24.598 -07 000000631 INF: MeasureProfile done
17-03-17 17:38:24.598 -07 000000631 INF: X=80  Z correction [um]=0.3608828
17-03-17 17:38:24.598 -07 000000631 INF: Autofocus finished
17-03-17 17:38:24.788 -07 000000482 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:24.788 -07 000000627 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 204 ms overall
17-03-17 17:38:24.788 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91162109375, Z-position -0.139184838859345. ----------
17-03-17 17:38:24.788 -07 000000610 INF: Cycle	3	Tile	1	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:24.798 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28993, sync = True, waitForSettling = True)
17-03-17 17:38:24.798 -07 000000610 INF: Z Motor: Moving to -0.132721 mm, started at -0.139185 mm, distance = 6.46 um
17-03-17 17:38:24.798 -07 000000610 INF: FPGA: Xmit ZDACW 28993\n [Z Motor]
17-03-17 17:38:24.798 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 17:38:24.808 -07 000000610 INF: FPGA: 'ZDACW 28993' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:24.808 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:24.808 -07 000000626 INF: FPGA: Recv ZDACR 28993
17-03-17 17:38:24.818 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.818 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:24.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.968 -07 000000501 INF: FPGA: Recv ZSGSRD 29951
17-03-17 17:38:24.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:24.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.978 -07 000000626 INF: FPGA: Recv ZSGSRD 29947
17-03-17 17:38:24.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.988 -07 000000501 INF: FPGA: Recv ZSGSRD 29948
17-03-17 17:38:24.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:24.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:24.998 -07 000000626 INF: FPGA: Recv ZSGSRD 29950
17-03-17 17:38:25.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:25.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:25.008 -07 000000547 INF: FPGA: Recv ZSGSRD 29945
17-03-17 17:38:25.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:25.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:25.018 -07 000000482 INF: FPGA: Recv ZSGSRD 29946
17-03-17 17:38:25.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:25.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:25.028 -07 000000547 INF: FPGA: Recv ZSGSRD 29948
17-03-17 17:38:25.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:25.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:25.038 -07 000000482 INF: FPGA: Recv ZSGSRD 29952
17-03-17 17:38:25.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:25.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:25.048 -07 000000547 INF: FPGA: Recv ZSGSRD 29950
17-03-17 17:38:25.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:25.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:25.058 -07 000000626 INF: FPGA: Recv ZSGSRD 29946
17-03-17 17:38:25.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:25.068 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:25.068 -07 000000618 INF: FPGA: Recv ZPIEZORD 25403
17-03-17 17:38:25.078 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:25.078 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.424 V. Piezo Error = -10.0 V.
17-03-17 17:38:25.078 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29948 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29948 (-131.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29945 (-131.9 uncal um), Max = 29952 (-132.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 17:38:25.078 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29948, posNoise = 4, negNoise = 3
17-03-17 17:38:25.078 -07 000000610 INF: Z Motor: After move to -0.132721, error = 0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:25.078 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 17:38:25.078 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:25.078 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:25.078 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:25.078 -07 000000541 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:25.078 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:25.078 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:25.078 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:25.078 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:25.078 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:38:25.078 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:25.078 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 17:38:25.078 -07 000000608 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-17 17:38:25.088 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:38:25.088 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:25.098 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-17 17:38:25.098 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-17 17:38:25.098 -07 000000608 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-17 17:38:25.098 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:25.108 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:38:25.108 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:25.108 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 17:38:25.108 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 32 ms.
17-03-17 17:38:25.118 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 29170 150\n [Camera]
17-03-17 17:38:25.318 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:25.708 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:25.708 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:25.708 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:25.708 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:25.708 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:25.708 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:25.708 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:25.708 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 1051332656, 0x0, 391868352) start.
17-03-17 17:38:25.718 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:25.718 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:38:25.898 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29170 775
17-03-17 17:38:25.928 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 3.988112,
17-03-17 17:38:26.048 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:26.088 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 1051332656, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 17:38:26.088 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-17 17:38:26.088 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:26.088 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 370 ms.
17-03-17 17:38:26.088 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 17:38:26.088 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:26.088 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:26.088 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 17:38:26.088 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:26.098 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 17:38:26.238 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:26.238 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:26.238 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:26.238 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:26.238 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:26.238 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:26.358 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:26.358 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 17:38:26.358 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:26.358 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) start.
17-03-17 17:38:26.428 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:38:26.428 -07 000000475 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:26.428 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 29170 150' command took 4 ms to send, 1304 ms to get response, and 1312 ms overall
17-03-17 17:38:26.428 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:38:26.428 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 2 at Y-position 59.91162109375, Z-Position -0.132715657232592. ------
17-03-17 17:38:26.428 -07 000000475 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:26.728 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 17:38:26.728 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 17:38:26.728 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:26.738 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 375 ms.
17-03-17 17:38:26.738 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 17:38:26.738 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:26.738 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:38:26.738 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:26.738 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 502 ms.
17-03-17 17:38:26.748 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 508 ms.
17-03-17 17:38:26.748 -07 000000631 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13907 mm
17-03-17 17:38:26.748 -07 000000631 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:26.758 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:26.758 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:26.758 -07 000000475 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 326 ms to get response, and 326 ms overall
17-03-17 17:38:26.758 -07 000000475 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:26.758 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:26.758 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-17 17:38:26.758 -07 000000618 INF: Y Motor: Moving to 60.7426 mm, started at 59.9116 mm, delta = 0.8310 mm
17-03-17 17:38:26.768 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:27.658 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 30379, sync = True, waitForSettling = False)
17-03-17 17:38:27.658 -07 000000429 INF: Z Motor: Moving to -0.139066 mm, started at -0.132716 mm, distance = -6.35 um
17-03-17 17:38:27.658 -07 000000429 INF: FPGA: Xmit ZDACW 30379\n [Z Motor]
17-03-17 17:38:28.188 -07 000000433 INF: FPGA: Recv YRDPOS 122699
17-03-17 17:38:28.188 -07 000000433 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:28.188 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 17:38:28.188 -07 000000475 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 1420 ms to get response, and 1422 ms overall
17-03-17 17:38:28.188 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1410 ms to get response, and 1421 ms overall
17-03-17 17:38:28.188 -07 000000618 INF: Y Motor: Encoder = 122699 = motor step 95858.6 = 59.9116 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:28.188 -07 000000618 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:28.188 -07 000000618 INF: Y Motor: Moving 1330 steps1
17-03-17 17:38:28.188 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:28.188 -07 000000429 INF: FPGA: 'ZDACW 30379' command took 0 ms to send, 520 ms to get response, and 529 ms overall
17-03-17 17:38:28.198 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:28.198 -07 000000433 INF: FPGA: Recv ZDACR 30379
17-03-17 17:38:28.208 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 17:38:28.208 -07 000000429 INF: Z Motor: MoveAbsStepped took 548 ms (did NOT wait for settling yet))
17-03-17 17:38:28.558 -07 000000475 INF: FPGA: Recv YMVTILE
17-03-17 17:38:28.558 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-17 17:38:28.588 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:28.598 -07 000000433 INF: FPGA: Recv YRDPOS 124382
17-03-17 17:38:28.598 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:38:28.598 -07 000000618 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:28.598 -07 000000618 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-17 17:38:28.598 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.831 mm, average velocity = 2.198 mm/sec
17-03-17 17:38:29.548 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:29.548 -07 000000429 INF: FPGA: Recv YRDPOS 124382
17-03-17 17:38:29.558 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:29.558 -07 000000618 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:29.568 -07 000000618 INF: Y Motor: After move to 60.742607, error = -0.009209, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:29.578 -07 000000618 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:38:29.578 -07 000000618 INF: Y Motor: Moved to 60.7334 after 2810 ms (table move)
17-03-17 17:38:29.578 -07 000000631 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139066 mm (DAC = 30379)
17-03-17 17:38:29.578 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:29.578 -07 000000429 INF: FPGA: Recv ZSGSRD 30930
17-03-17 17:38:29.588 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:29.588 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:29.588 -07 000000618 INF: FPGA: Recv ZSGSRD 30930
17-03-17 17:38:29.598 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:29.598 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:29.598 -07 000000429 INF: FPGA: Recv ZSGSRD 30941
17-03-17 17:38:29.608 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:29.608 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:29.608 -07 000000618 INF: FPGA: Recv ZSGSRD 30940
17-03-17 17:38:29.618 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:29.618 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:29.618 -07 000000458 INF: FPGA: Recv ZSGSRD 30944
17-03-17 17:38:29.628 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:29.628 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:29.628 -07 000000431 INF: FPGA: Recv ZSGSRD 30941
17-03-17 17:38:29.638 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:29.638 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:29.638 -07 000000486 INF: FPGA: Recv ZSGSRD 30940
17-03-17 17:38:29.648 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:29.648 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:29.648 -07 000000458 INF: FPGA: Recv ZSGSRD 30934
17-03-17 17:38:29.658 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:29.658 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:29.658 -07 000000486 INF: FPGA: Recv ZSGSRD 30933
17-03-17 17:38:29.668 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:29.668 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:29.668 -07 000000458 INF: FPGA: Recv ZSGSRD 30938
17-03-17 17:38:29.678 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:29.678 -07 000000631 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:29.678 -07 000000433 INF: FPGA: Recv ZPIEZORD 26744
17-03-17 17:38:29.688 -07 000000631 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:29.688 -07 000000631 INF: Z Motor: Piezo is near 37.1 V (nominally 0 to 100 V), expect near 46.4 V, since DAC is at 4.636 V. Piezo Error = -9.2 V.
17-03-17 17:38:29.688 -07 000000631 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.1 um, Read 10 ADC samples: Avg = 30937 (-138.3 uncal um), Error = 0.8 uncal um, Median = 30939 (-138.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30930 (-138.2 uncal um), Max = 30944 (-138.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 17:38:29.688 -07 000000631 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30937, posNoise = 7, negNoise = 7
17-03-17 17:38:29.688 -07 000000631 INF: Z Motor: After move to -0.139066, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:29.688 -07 000000631 INF: Z Motor: Settle wait time = 1921 ms, measure time = 108 ms (allowed 150 ms), total time = 2029 ms
17-03-17 17:38:29.688 -07 000000631 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:29.738 -07 000000631 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2983 ms
17-03-17 17:38:29.738 -07 000000631 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:29.738 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:29.738 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:29.738 -07 000000631 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:29.738 -07 000000486 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:29.738 -07 000000431 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:29.738 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:29.738 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:29.738 -07 000000431 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:29.748 -07 000000431 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:29.748 -07 000000431 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:29.758 -07 000000431 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 17:38:29.758 -07 000000431 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-17 17:38:29.758 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:29.808 -07 000000631 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:30.008 -07 000000458 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:30.008 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:30.008 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:30.008 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) start.
17-03-17 17:38:30.048 -07 000000618 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:30.048 -07 000000486 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:30.048 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 285 ms overall
17-03-17 17:38:30.138 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 17:38:30.138 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:30.138 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:38:30.138 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 17:38:30.148 -07 000000458 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:30.148 -07 000000618 INF: Autofocus start
17-03-17 17:38:30.148 -07 000000618 INF: MeasureProfile start
17-03-17 17:38:30.148 -07 000000433 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:30.158 -07 000000458 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:30.158 -07 000000458 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:30.158 -07 000000618 INF: MeasureProfile done
17-03-17 17:38:30.158 -07 000000618 INF: X=48  Z correction [um]=0.2069503
17-03-17 17:38:30.158 -07 000000618 INF: Autofocus finished
17-03-17 17:38:30.358 -07 000000433 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:30.358 -07 000000458 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:38:30.358 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.7333984375, Z-position -0.139069203040794. ----------
17-03-17 17:38:30.358 -07 000000610 INF: Cycle	3	Tile	2	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:30.368 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28937, sync = True, waitForSettling = True)
17-03-17 17:38:30.368 -07 000000610 INF: Z Motor: Moving to -0.132465 mm, started at -0.139069 mm, distance = 6.60 um
17-03-17 17:38:30.368 -07 000000610 INF: FPGA: Xmit ZDACW 28937\n [Z Motor]
17-03-17 17:38:30.368 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 17:38:30.378 -07 000000610 INF: FPGA: 'ZDACW 28937' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:30.378 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:30.378 -07 000000431 INF: FPGA: Recv ZDACR 28937
17-03-17 17:38:30.388 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:30.388 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:30.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:30.538 -07 000000475 INF: FPGA: Recv ZSGSRD 29913
17-03-17 17:38:30.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:30.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:30.548 -07 000000486 INF: FPGA: Recv ZSGSRD 29909
17-03-17 17:38:30.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:30.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:30.558 -07 000000458 INF: FPGA: Recv ZSGSRD 29907
17-03-17 17:38:30.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:30.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:30.568 -07 000000431 INF: FPGA: Recv ZSGSRD 29911
17-03-17 17:38:30.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:30.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:30.578 -07 000000475 INF: FPGA: Recv ZSGSRD 29908
17-03-17 17:38:30.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:30.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:30.588 -07 000000486 INF: FPGA: Recv ZSGSRD 29908
17-03-17 17:38:30.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:30.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:30.598 -07 000000433 INF: FPGA: Recv ZSGSRD 29910
17-03-17 17:38:30.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:30.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:30.608 -07 000000458 INF: FPGA: Recv ZSGSRD 29913
17-03-17 17:38:30.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:30.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:30.618 -07 000000486 INF: FPGA: Recv ZSGSRD 29909
17-03-17 17:38:30.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:30.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:30.628 -07 000000431 INF: FPGA: Recv ZSGSRD 29910
17-03-17 17:38:30.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:30.638 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:30.638 -07 000000433 INF: FPGA: Recv ZPIEZORD 25406
17-03-17 17:38:30.648 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:30.648 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.416 V. Piezo Error = -9.9 V.
17-03-17 17:38:30.648 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.5 um, Read 10 ADC samples: Avg = 29910 (-131.7 uncal um), Error = 0.8 uncal um, Median = 29910 (-131.7 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 29907 (-131.7 uncal um), Max = 29913 (-131.7 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 17:38:30.648 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29910, posNoise = 3, negNoise = 3
17-03-17 17:38:30.648 -07 000000610 INF: Z Motor: After move to -0.132465, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:30.648 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 17:38:30.648 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:30.648 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:30.648 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:30.648 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:30.648 -07 000000631 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:30.648 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:30.648 -07 000000433 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:30.648 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:30.648 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:30.648 -07 000000631 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:30.648 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:38:30.648 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:30.648 -07 000000631 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:30.648 -07 000000631 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:30.648 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:38:30.658 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:30.668 -07 000000631 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 17:38:30.668 -07 000000631 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 17:38:30.668 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 17:38:30.668 -07 000000433 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 17:38:30.668 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 29114 150\n [Camera]
17-03-17 17:38:30.868 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:31.258 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:31.258 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:31.258 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:31.268 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:31.268 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:31.268 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:31.268 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:31.268 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) start.
17-03-17 17:38:31.268 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:31.268 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 17:38:31.288 -07 000000486 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 3.993549,
17-03-17 17:38:31.458 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29114 775
17-03-17 17:38:31.518 -07 000000431 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:31.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:31.608 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:31.648 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 17:38:31.648 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 17:38:31.648 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:31.648 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:31.658 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 17:38:31.658 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 389 ms.
17-03-17 17:38:31.658 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 17:38:31.658 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:31.658 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:31.658 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 17:38:31.798 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1116
17-03-17 17:38:31.798 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1116
17-03-17 17:38:31.798 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:31.798 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1116
17-03-17 17:38:31.798 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1116
17-03-17 17:38:31.798 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:31.798 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) start.
17-03-17 17:38:31.798 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:31.798 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:31.798 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 17:38:31.988 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:38:31.988 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:31.988 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 29114 150' command took 2 ms to send, 1301 ms to get response, and 1313 ms overall
17-03-17 17:38:31.988 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:38:31.988 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.7333984375, Z-Position -0.132471537171205. ------
17-03-17 17:38:31.988 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:32.208 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 405 ms.
17-03-17 17:38:32.208 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-17 17:38:32.208 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:32.208 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) end. Duration was 406 ms.
17-03-17 17:38:32.208 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-17 17:38:32.208 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:32.208 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:32.208 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:32.208 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 414 ms.
17-03-17 17:38:32.218 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 417 ms.
17-03-17 17:38:32.218 -07 000000431 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13918 mm
17-03-17 17:38:32.218 -07 000000431 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:32.228 -07 000000429 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:32.228 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 233 ms to get response, and 235 ms overall
17-03-17 17:38:32.228 -07 000000618 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:32.228 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-17 17:38:32.228 -07 000000429 INF: Y Motor: Moving to 61.5726 mm, started at 60.7334 mm, delta = 0.8392 mm
17-03-17 17:38:32.238 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:33.248 -07 000000623 INF: Z Motor: Entering MoveAbsStepped (DAC = 30404, sync = True, waitForSettling = False)
17-03-17 17:38:33.248 -07 000000623 INF: Z Motor: Moving to -0.139181 mm, started at -0.132472 mm, distance = -6.71 um
17-03-17 17:38:33.248 -07 000000623 INF: FPGA: Xmit ZDACW 30404\n [Z Motor]
17-03-17 17:38:33.758 -07 000000409 INF: FPGA: Recv YRDPOS 124382
17-03-17 17:38:33.758 -07 000000409 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:33.758 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 17:38:33.758 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1510 ms to get response, and 1525 ms overall
17-03-17 17:38:33.758 -07 000000429 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:33.758 -07 000000429 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:33.758 -07 000000429 INF: Y Motor: Moving 1343 steps-19
17-03-17 17:38:33.758 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:33.758 -07 000000618 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 1520 ms to get response, and 1526 ms overall
17-03-17 17:38:33.758 -07 000000623 INF: FPGA: 'ZDACW 30404' command took 0 ms to send, 500 ms to get response, and 507 ms overall
17-03-17 17:38:33.768 -07 000000623 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:33.768 -07 000000409 INF: FPGA: Recv ZDACR 30404
17-03-17 17:38:33.778 -07 000000623 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 17:38:33.778 -07 000000623 INF: Z Motor: MoveAbsStepped took 526 ms (did NOT wait for settling yet))
17-03-17 17:38:34.128 -07 000000409 INF: FPGA: Recv YMVTILE
17-03-17 17:38:34.128 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-17 17:38:34.168 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:34.168 -07 000000623 INF: FPGA: Recv YRDPOS 126084
17-03-17 17:38:34.178 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:34.178 -07 000000429 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:34.178 -07 000000429 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 17:38:34.178 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.839 mm, average velocity = 2.220 mm/sec
17-03-17 17:38:35.128 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:35.128 -07 000000623 INF: FPGA: Recv YRDPOS 126084
17-03-17 17:38:35.138 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.138 -07 000000429 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:35.158 -07 000000429 INF: Y Motor: After move to 61.572609, error = -0.008156, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:35.158 -07 000000429 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:38:35.158 -07 000000429 INF: Y Motor: Moved to 61.5645 after 2925 ms (table move)
17-03-17 17:38:35.158 -07 000000431 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139181 mm (DAC = 30404)
17-03-17 17:38:35.158 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:35.158 -07 000000623 INF: FPGA: Recv ZSGSRD 30966
17-03-17 17:38:35.168 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:35.168 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:35.168 -07 000000618 INF: FPGA: Recv ZSGSRD 30959
17-03-17 17:38:35.178 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.178 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:35.178 -07 000000618 INF: FPGA: Recv ZSGSRD 30963
17-03-17 17:38:35.188 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.188 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:35.188 -07 000000429 INF: FPGA: Recv ZSGSRD 30957
17-03-17 17:38:35.198 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.198 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:35.198 -07 000000429 INF: FPGA: Recv ZSGSRD 30954
17-03-17 17:38:35.208 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.208 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:35.208 -07 000000618 INF: FPGA: Recv ZSGSRD 30956
17-03-17 17:38:35.218 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.218 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:35.218 -07 000000623 INF: FPGA: Recv ZSGSRD 30953
17-03-17 17:38:35.228 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.228 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:35.228 -07 000000409 INF: FPGA: Recv ZSGSRD 30951
17-03-17 17:38:35.238 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.238 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:35.238 -07 000000618 INF: FPGA: Recv ZSGSRD 30951
17-03-17 17:38:35.248 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.248 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:35.248 -07 000000409 INF: FPGA: Recv ZSGSRD 30962
17-03-17 17:38:35.258 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.258 -07 000000431 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:35.258 -07 000000618 INF: FPGA: Recv ZPIEZORD 26797
17-03-17 17:38:35.268 -07 000000431 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.268 -07 000000431 INF: Z Motor: Piezo is near 37.2 V (nominally 0 to 100 V), expect near 46.4 V, since DAC is at 4.639 V. Piezo Error = -9.1 V.
17-03-17 17:38:35.268 -07 000000431 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.2 um, Read 10 ADC samples: Avg = 30957 (-138.4 uncal um), Error = 0.8 uncal um, Median = 30956 (-138.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30951 (-138.4 uncal um), Max = 30966 (-138.5 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 17:38:35.268 -07 000000431 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30957, posNoise = 9, negNoise = 6
17-03-17 17:38:35.268 -07 000000431 INF: Z Motor: After move to -0.139181, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:35.268 -07 000000431 INF: Z Motor: Settle wait time = 1910 ms, measure time = 108 ms (allowed 150 ms), total time = 2018 ms
17-03-17 17:38:35.268 -07 000000431 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:35.318 -07 000000431 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 3091 ms
17-03-17 17:38:35.318 -07 000000431 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:35.318 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:35.318 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:35.318 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:35.318 -07 000000482 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:35.318 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:35.318 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:35.318 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:38:35.318 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:35.318 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:35.318 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:35.338 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 17:38:35.338 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 17:38:35.338 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:35.388 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:35.588 -07 000000618 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:35.588 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:35.588 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:35.588 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1170603392, 0x0, 559484976) start.
17-03-17 17:38:35.618 -07 000000424 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:35.628 -07 000000626 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:35.628 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 280 ms to get response, and 284 ms overall
17-03-17 17:38:35.718 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1170603392, 0x0, 559484976) end. Duration was 128 ms.
17-03-17 17:38:35.718 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:35.718 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:38:35.718 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 17:38:35.728 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:35.728 -07 000000424 INF: Autofocus start
17-03-17 17:38:35.728 -07 000000424 INF: MeasureProfile start
17-03-17 17:38:35.728 -07 000000429 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:35.738 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:35.738 -07 000000618 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:35.738 -07 000000424 INF: MeasureProfile done
17-03-17 17:38:35.738 -07 000000424 INF: X=0  Z correction [um]=-0.02394831
17-03-17 17:38:35.738 -07 000000424 INF: Autofocus finished
17-03-17 17:38:35.938 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:35.938 -07 000000618 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:38:35.938 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.564453125, Z-position -0.139197687283629. ----------
17-03-17 17:38:35.948 -07 000000610 INF: Cycle	3	Tile	3	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:35.948 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28912, sync = True, waitForSettling = True)
17-03-17 17:38:35.948 -07 000000610 INF: Z Motor: Moving to -0.132351 mm, started at -0.139198 mm, distance = 6.85 um
17-03-17 17:38:35.948 -07 000000610 INF: FPGA: Xmit ZDACW 28912\n [Z Motor]
17-03-17 17:38:35.948 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 17:38:35.958 -07 000000610 INF: FPGA: 'ZDACW 28912' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:38:35.958 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:35.958 -07 000000424 INF: FPGA: Recv ZDACR 28912
17-03-17 17:38:35.968 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:35.968 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:36.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:36.118 -07 000000409 INF: FPGA: Recv ZSGSRD 29895
17-03-17 17:38:36.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:36.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:36.128 -07 000000424 INF: FPGA: Recv ZSGSRD 29897
17-03-17 17:38:36.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:36.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:36.138 -07 000000409 INF: FPGA: Recv ZSGSRD 29894
17-03-17 17:38:36.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:36.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:36.148 -07 000000431 INF: FPGA: Recv ZSGSRD 29888
17-03-17 17:38:36.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:36.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:36.158 -07 000000409 INF: FPGA: Recv ZSGSRD 29890
17-03-17 17:38:36.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:36.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:36.168 -07 000000626 INF: FPGA: Recv ZSGSRD 29893
17-03-17 17:38:36.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:36.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:36.178 -07 000000482 INF: FPGA: Recv ZSGSRD 29894
17-03-17 17:38:36.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:36.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:36.188 -07 000000618 INF: FPGA: Recv ZSGSRD 29895
17-03-17 17:38:36.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:36.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:36.198 -07 000000431 INF: FPGA: Recv ZSGSRD 29891
17-03-17 17:38:36.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:36.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:36.208 -07 000000626 INF: FPGA: Recv ZSGSRD 29890
17-03-17 17:38:36.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:36.218 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:36.218 -07 000000482 INF: FPGA: Recv ZPIEZORD 25386
17-03-17 17:38:36.228 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:36.228 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.412 V. Piezo Error = -9.9 V.
17-03-17 17:38:36.228 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29893 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29894 (-131.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29888 (-131.5 uncal um), Max = 29897 (-131.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:38:36.228 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29893, posNoise = 4, negNoise = 5
17-03-17 17:38:36.228 -07 000000610 INF: Z Motor: After move to -0.132351, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:36.228 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 17:38:36.228 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:36.228 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:36.228 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:36.228 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:36.228 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:36.228 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:36.228 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:36.228 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:36.228 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 17:38:36.228 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:36.228 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:36.228 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:36.238 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:36.238 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 17:38:36.238 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:36.238 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:36.248 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 17:38:36.248 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 17:38:36.248 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 17:38:36.248 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 17:38:36.258 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 29088 150\n [Camera]
17-03-17 17:38:36.458 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:36.518 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:36.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:36.648 -07 000000482 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.008536,
17-03-17 17:38:36.848 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:36.848 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:36.848 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:36.848 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:36.848 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 17:38:36.848 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:36.848 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:36.848 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:36.848 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:36.848 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 17:38:37.038 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29088 775
17-03-17 17:38:37.188 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:37.238 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 396 ms.
17-03-17 17:38:37.238 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 17:38:37.238 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:37.248 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:37.248 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 17:38:37.248 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 397 ms.
17-03-17 17:38:37.248 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-17 17:38:37.248 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:37.248 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:37.258 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-17 17:38:37.378 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:37.378 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:37.378 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:37.378 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:37.378 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 17:38:37.378 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:37.378 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:37.378 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:37.378 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:37.378 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 17:38:37.568 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:38:37.568 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:37.568 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 29088 150' command took 2 ms to send, 1303 ms to get response, and 1313 ms overall
17-03-17 17:38:37.568 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:38:37.568 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.564453125, Z-Position -0.132362325564795. ------
17-03-17 17:38:37.568 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:37.778 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 403 ms.
17-03-17 17:38:37.778 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-17 17:38:37.778 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:37.778 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 402 ms.
17-03-17 17:38:37.778 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 17:38:37.778 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:37.788 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:37.788 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:38:37.788 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 411 ms.
17-03-17 17:38:37.788 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-17 17:38:37.798 -07 000000424 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13871 mm
17-03-17 17:38:37.798 -07 000000424 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:37.808 -07 000000409 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:37.808 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 231 ms to get response, and 233 ms overall
17-03-17 17:38:37.808 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:37.808 -07 000000409 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-17 17:38:37.808 -07 000000409 INF: Y Motor: Moving to 62.4026 mm, started at 61.5645 mm, delta = 0.8382 mm
17-03-17 17:38:37.818 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:38.758 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 30302, sync = True, waitForSettling = False)
17-03-17 17:38:38.758 -07 000000547 INF: Z Motor: Moving to -0.138714 mm, started at -0.132362 mm, distance = -6.35 um
17-03-17 17:38:38.758 -07 000000547 INF: FPGA: Xmit ZDACW 30302\n [Z Motor]
17-03-17 17:38:39.758 -07 000000501 INF: FPGA: Recv YRDPOS 126084
17-03-17 17:38:39.758 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:39.758 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 17:38:39.758 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1930 ms to get response, and 1947 ms overall
17-03-17 17:38:39.758 -07 000000409 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:39.758 -07 000000409 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:39.758 -07 000000409 INF: Y Motor: Moving 1341 steps-17
17-03-17 17:38:39.758 -07 000000409 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:39.758 -07 000000547 INF: FPGA: 'ZDACW 30302' command took 0 ms to send, 990 ms to get response, and 999 ms overall
17-03-17 17:38:39.758 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 1940 ms to get response, and 1948 ms overall
17-03-17 17:38:39.768 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:39.768 -07 000000626 INF: FPGA: Recv ZDACR 30302
17-03-17 17:38:39.778 -07 000000547 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 17:38:39.778 -07 000000547 INF: Z Motor: MoveAbsStepped took 1018 ms (did NOT wait for settling yet))
17-03-17 17:38:40.128 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-17 17:38:40.128 -07 000000409 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-17 17:38:40.168 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:40.168 -07 000000626 INF: FPGA: Recv YRDPOS 127787
17-03-17 17:38:40.178 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:40.178 -07 000000409 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:40.178 -07 000000409 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm)
17-03-17 17:38:40.178 -07 000000409 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.217 mm/sec
17-03-17 17:38:41.128 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:41.128 -07 000000501 INF: FPGA: Recv YRDPOS 127787
17-03-17 17:38:41.138 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:41.138 -07 000000409 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:41.148 -07 000000409 INF: Y Motor: After move to 62.402607, error = -0.006611, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:41.148 -07 000000409 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:38:41.148 -07 000000409 INF: Y Motor: Moved to 62.3960 after 3344 ms (table move)
17-03-17 17:38:41.158 -07 000000424 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138714 mm (DAC = 30302)
17-03-17 17:38:41.158 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:41.158 -07 000000501 INF: FPGA: Recv ZSGSRD 30883
17-03-17 17:38:41.168 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:41.168 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:41.168 -07 000000626 INF: FPGA: Recv ZSGSRD 30893
17-03-17 17:38:41.178 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:41.178 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:41.178 -07 000000501 INF: FPGA: Recv ZSGSRD 30884
17-03-17 17:38:41.188 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:41.188 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:41.188 -07 000000501 INF: FPGA: Recv ZSGSRD 30880
17-03-17 17:38:41.198 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:41.198 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:41.198 -07 000000626 INF: FPGA: Recv ZSGSRD 30890
17-03-17 17:38:41.208 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:41.208 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:41.208 -07 000000409 INF: FPGA: Recv ZSGSRD 30877
17-03-17 17:38:41.218 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:41.218 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:41.218 -07 000000501 INF: FPGA: Recv ZSGSRD 30874
17-03-17 17:38:41.228 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:41.228 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:41.228 -07 000000626 INF: FPGA: Recv ZSGSRD 30885
17-03-17 17:38:41.238 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:41.238 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:41.238 -07 000000547 INF: FPGA: Recv ZSGSRD 30885
17-03-17 17:38:41.248 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:41.248 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:41.248 -07 000000442 INF: FPGA: Recv ZSGSRD 30881
17-03-17 17:38:41.258 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:41.258 -07 000000424 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:41.258 -07 000000547 INF: FPGA: Recv ZPIEZORD 26726
17-03-17 17:38:41.268 -07 000000424 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:41.268 -07 000000424 INF: Z Motor: Piezo is near 37.1 V (nominally 0 to 100 V), expect near 46.2 V, since DAC is at 4.624 V. Piezo Error = -9.1 V.
17-03-17 17:38:41.268 -07 000000424 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.7 um, Read 10 ADC samples: Avg = 30883 (-137.9 uncal um), Error = 0.8 uncal um, Median = 30884 (-137.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 30874 (-137.9 uncal um), Max = 30893 (-138.0 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 17:38:41.268 -07 000000424 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30883, posNoise = 10, negNoise = 9
17-03-17 17:38:41.268 -07 000000424 INF: Z Motor: After move to -0.138714, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:41.268 -07 000000424 INF: Z Motor: Settle wait time = 2400 ms, measure time = 109 ms (allowed 150 ms), total time = 2509 ms
17-03-17 17:38:41.268 -07 000000424 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:41.318 -07 000000424 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 3514 ms
17-03-17 17:38:41.318 -07 000000424 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:41.318 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:41.318 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:41.318 -07 000000541 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:41.318 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:41.318 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:41.318 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:41.318 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:38:41.318 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:41.318 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:41.318 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:41.338 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 17:38:41.338 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 17:38:41.338 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:41.388 -07 000000541 INF: FPGA: Recv @CAMSNAP turning led on 42
17-03-17 17:38:41.518 -07 000000442 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:41.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:41.588 -07 000000409 INF: FPGA: Recv @CAMSNAP img rdy 242
17-03-17 17:38:41.588 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 242
17-03-17 17:38:41.588 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:41.588 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) start.
17-03-17 17:38:41.618 -07 000000626 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:41.628 -07 000000541 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:41.628 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 280 ms to get response, and 284 ms overall
17-03-17 17:38:41.718 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 17:38:41.718 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:41.718 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:38:41.718 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 17:38:41.728 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:41.728 -07 000000501 INF: Autofocus start
17-03-17 17:38:41.728 -07 000000501 INF: MeasureProfile start
17-03-17 17:38:41.728 -07 000000442 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:41.738 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:38:41.738 -07 000000626 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:41.738 -07 000000501 INF: MeasureProfile done
17-03-17 17:38:41.738 -07 000000501 INF: X=0  Z correction [um]=-0.02394831
17-03-17 17:38:41.738 -07 000000501 INF: Autofocus finished
17-03-17 17:38:41.938 -07 000000501 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:41.938 -07 000000626 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-17 17:38:41.938 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39599609375, Z-position -0.138722295585139. ----------
17-03-17 17:38:41.938 -07 000000610 INF: Cycle	3	Tile	4	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:41.948 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28809, sync = True, waitForSettling = True)
17-03-17 17:38:41.948 -07 000000610 INF: Z Motor: Moving to -0.131879 mm, started at -0.138722 mm, distance = 6.84 um
17-03-17 17:38:41.948 -07 000000610 INF: FPGA: Xmit ZDACW 28809\n [Z Motor]
17-03-17 17:38:41.948 -07 000000448 INF: FPGA: Recv ZDACW
17-03-17 17:38:41.958 -07 000000610 INF: FPGA: 'ZDACW 28809' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:41.958 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:41.958 -07 000000424 INF: FPGA: Recv ZDACR 28809
17-03-17 17:38:41.968 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:41.968 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:42.008 -07 000000541 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 3.985358,
17-03-17 17:38:42.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:42.118 -07 000000448 INF: FPGA: Recv ZSGSRD 29824
17-03-17 17:38:42.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:42.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:42.128 -07 000000626 INF: FPGA: Recv ZSGSRD 29821
17-03-17 17:38:42.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:42.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:42.138 -07 000000541 INF: FPGA: Recv ZSGSRD 29816
17-03-17 17:38:42.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:42.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:42.148 -07 000000626 INF: FPGA: Recv ZSGSRD 29813
17-03-17 17:38:42.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:42.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:42.158 -07 000000424 INF: FPGA: Recv ZSGSRD 29822
17-03-17 17:38:42.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:42.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:42.168 -07 000000442 INF: FPGA: Recv ZSGSRD 29820
17-03-17 17:38:42.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:42.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:42.178 -07 000000409 INF: FPGA: Recv ZSGSRD 29821
17-03-17 17:38:42.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:42.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:42.188 -07 000000547 INF: FPGA: Recv ZSGSRD 29821
17-03-17 17:38:42.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:42.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:42.198 -07 000000424 INF: FPGA: Recv ZSGSRD 29821
17-03-17 17:38:42.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:42.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:42.208 -07 000000547 INF: FPGA: Recv ZSGSRD 29820
17-03-17 17:38:42.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:42.218 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:42.218 -07 000000424 INF: FPGA: Recv ZPIEZORD 25311
17-03-17 17:38:42.228 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:42.228 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.396 V. Piezo Error = -9.9 V.
17-03-17 17:38:42.228 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29820 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29821 (-131.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29813 (-131.1 uncal um), Max = 29824 (-131.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 17:38:42.228 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29820, posNoise = 4, negNoise = 7
17-03-17 17:38:42.228 -07 000000610 INF: Z Motor: After move to -0.131879, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:42.228 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 17:38:42.228 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:42.228 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:42.228 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:42.228 -07 000000442 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:42.228 -07 000000409 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:42.228 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:42.228 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:42.228 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:42.228 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:42.228 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:42.228 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:38:42.228 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:42.238 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:38:42.238 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:42.238 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 17:38:42.238 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:42.248 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 17:38:42.248 -07 000000409 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 17:38:42.248 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 17:38:42.248 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 17:38:42.258 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28986 150\n [Camera]
17-03-17 17:38:42.458 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:42.848 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:42.848 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:42.848 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:42.848 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:42.848 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 17:38:42.848 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:42.848 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:42.848 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:42.848 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:42.848 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 17:38:43.038 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28986 775
17-03-17 17:38:43.188 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:43.248 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 399 ms.
17-03-17 17:38:43.248 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 17:38:43.248 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:43.248 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 398 ms.
17-03-17 17:38:43.248 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 17:38:43.248 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:43.248 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 17:38:43.248 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-17 17:38:43.258 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:43.258 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-17 17:38:43.378 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:43.378 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:43.378 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:43.498 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:43.498 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:43.498 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:43.498 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:43.498 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 17:38:43.498 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:43.498 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) start.
17-03-17 17:38:43.568 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:38:43.568 -07 000000547 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:43.568 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28986 150' command took 2 ms to send, 1303 ms to get response, and 1313 ms overall
17-03-17 17:38:43.568 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:38:43.568 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 5 at Y-position 62.39599609375, Z-Position -0.131893358078447. ------
17-03-17 17:38:43.568 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:43.568 -07 000000501 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13863 mm
17-03-17 17:38:43.568 -07 000000501 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:43.888 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 387 ms.
17-03-17 17:38:43.888 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 17:38:43.888 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:43.888 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) end. Duration was 386 ms.
17-03-17 17:38:43.888 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 17:38:43.888 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:43.888 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:43.888 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 512 ms.
17-03-17 17:38:43.888 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:43.898 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-17 17:38:43.898 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-17 17:38:43.898 -07 000000424 INF: Y Motor: Moving to 63.2326 mm, started at 62.3960 mm, delta = 0.8366 mm
17-03-17 17:38:43.898 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:43.908 -07 000000541 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:43.908 -07 000000541 INF: FPGA: Recv YRDPOS 127787
17-03-17 17:38:43.908 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 335 ms to get response, and 337 ms overall
17-03-17 17:38:43.908 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 6 ms to get response, and 7 ms overall
17-03-17 17:38:43.908 -07 000000424 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:43.908 -07 000000424 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:43.908 -07 000000424 INF: Y Motor: Moving 1339 steps-14
17-03-17 17:38:43.908 -07 000000547 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:43.908 -07 000000541 INF: Z Motor: Entering MoveAbsStepped (DAC = 30283, sync = True, waitForSettling = False)
17-03-17 17:38:43.908 -07 000000541 INF: Z Motor: Moving to -0.138627 mm, started at -0.131893 mm, distance = -6.73 um
17-03-17 17:38:43.918 -07 000000541 INF: FPGA: Xmit ZDACW 30283\n [Z Motor]
17-03-17 17:38:43.928 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:44.488 -07 000000475 INF: FPGA: Recv ZDACW
17-03-17 17:38:44.488 -07 000000475 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:44.488 -07 000000475 INF: FPGA: Recv YMVTILE
17-03-17 17:38:44.488 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 550 ms to get response, and 573 ms overall
17-03-17 17:38:44.488 -07 000000541 INF: FPGA: 'ZDACW 30283' command took 0 ms to send, 560 ms to get response, and 572 ms overall
17-03-17 17:38:44.488 -07 000000541 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:44.488 -07 000000547 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 570 ms to get response, and 574 ms overall
17-03-17 17:38:44.488 -07 000000547 INF: FPGA: Recv ZDACR 30283
17-03-17 17:38:44.498 -07 000000541 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:44.498 -07 000000541 INF: Z Motor: MoveAbsStepped took 582 ms (did NOT wait for settling yet))
17-03-17 17:38:44.518 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:44.518 -07 000000541 INF: FPGA: Recv YRDPOS 129484
17-03-17 17:38:44.528 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:44.528 -07 000000424 INF: Y Motor: Encoder = 129484 = motor step 101159.4 = 63.2246 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:44.528 -07 000000424 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-17 17:38:44.528 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 574 ms, distance = 0.837 mm, average velocity = 1.458 mm/sec
17-03-17 17:38:45.478 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:45.478 -07 000000475 INF: FPGA: Recv YRDPOS 129484
17-03-17 17:38:45.488 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:45.488 -07 000000424 INF: Y Motor: Encoder = 129484 = motor step 101159.4 = 63.2246 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:45.498 -07 000000424 INF: Y Motor: After move to 63.232609, error = -0.007999, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:45.498 -07 000000424 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:38:45.498 -07 000000424 INF: Y Motor: Moved to 63.2246 after 1601 ms (table move)
17-03-17 17:38:45.508 -07 000000501 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138627 mm (DAC = 30283)
17-03-17 17:38:45.508 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:45.508 -07 000000547 INF: FPGA: Recv ZSGSRD 30874
17-03-17 17:38:45.518 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:45.518 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:45.518 -07 000000424 INF: FPGA: Recv ZSGSRD 30878
17-03-17 17:38:45.528 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:45.528 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:45.528 -07 000000475 INF: FPGA: Recv ZSGSRD 30876
17-03-17 17:38:45.538 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:45.538 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:45.538 -07 000000424 INF: FPGA: Recv ZSGSRD 30871
17-03-17 17:38:45.548 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:45.548 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:45.548 -07 000000475 INF: FPGA: Recv ZSGSRD 30866
17-03-17 17:38:45.558 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:45.558 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:45.558 -07 000000424 INF: FPGA: Recv ZSGSRD 30872
17-03-17 17:38:45.568 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:45.568 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:45.568 -07 000000475 INF: FPGA: Recv ZSGSRD 30870
17-03-17 17:38:45.578 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:45.578 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:45.578 -07 000000424 INF: FPGA: Recv ZSGSRD 30865
17-03-17 17:38:45.588 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:45.588 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:45.588 -07 000000547 INF: FPGA: Recv ZSGSRD 30871
17-03-17 17:38:45.598 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:45.598 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:45.598 -07 000000475 INF: FPGA: Recv ZSGSRD 30865
17-03-17 17:38:45.608 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:45.608 -07 000000501 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:45.608 -07 000000541 INF: FPGA: Recv ZPIEZORD 26735
17-03-17 17:38:45.618 -07 000000501 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:45.618 -07 000000501 INF: Z Motor: Piezo is near 37.1 V (nominally 0 to 100 V), expect near 46.2 V, since DAC is at 4.621 V. Piezo Error = -9.1 V.
17-03-17 17:38:45.618 -07 000000501 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.6 um, Read 10 ADC samples: Avg = 30871 (-137.8 uncal um), Error = 0.8 uncal um, Median = 30871 (-137.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 30865 (-137.8 uncal um), Max = 30878 (-137.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 17:38:45.618 -07 000000501 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30871, posNoise = 7, negNoise = 6
17-03-17 17:38:45.618 -07 000000501 INF: Z Motor: After move to -0.138627, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:45.618 -07 000000501 INF: Z Motor: Settle wait time = 1595 ms, measure time = 108 ms (allowed 150 ms), total time = 1703 ms
17-03-17 17:38:45.618 -07 000000501 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:45.668 -07 000000501 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2091 ms
17-03-17 17:38:45.668 -07 000000501 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:45.668 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:45.668 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:45.668 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:45.668 -07 000000475 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:45.668 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:45.668 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:45.668 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:38:45.668 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:45.668 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:45.668 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:45.678 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 17:38:45.678 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-17 17:38:45.688 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:45.728 -07 000000547 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:45.928 -07 000000458 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:45.928 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:45.928 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:45.928 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) start.
17-03-17 17:38:45.968 -07 000000475 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:45.968 -07 000000541 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:45.968 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 276 ms to get response, and 285 ms overall
17-03-17 17:38:46.048 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) end. Duration was 114 ms.
17-03-17 17:38:46.048 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:46.048 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:38:46.048 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 17:38:46.068 -07 000000458 INF: Autofocus start
17-03-17 17:38:46.068 -07 000000458 INF: MeasureProfile start
17-03-17 17:38:46.068 -07 000000486 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:46.068 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:46.078 -07 000000486 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:38:46.078 -07 000000486 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:46.078 -07 000000458 INF: MeasureProfile done
17-03-17 17:38:46.078 -07 000000458 INF: X=0  Z correction [um]=-0.02394831
17-03-17 17:38:46.078 -07 000000458 INF: Autofocus finished
17-03-17 17:38:46.278 -07 000000541 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:46.278 -07 000000486 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-17 17:38:46.278 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.224609375, Z-position -0.138645205039438. ----------
17-03-17 17:38:46.278 -07 000000610 INF: Cycle	3	Tile	5	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:46.288 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28790, sync = True, waitForSettling = True)
17-03-17 17:38:46.288 -07 000000610 INF: Z Motor: Moving to -0.131792 mm, started at -0.138645 mm, distance = 6.85 um
17-03-17 17:38:46.288 -07 000000610 INF: FPGA: Xmit ZDACW 28790\n [Z Motor]
17-03-17 17:38:46.288 -07 000000541 INF: FPGA: Recv ZDACW
17-03-17 17:38:46.298 -07 000000610 INF: FPGA: 'ZDACW 28790' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:46.298 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:46.298 -07 000000458 INF: FPGA: Recv ZDACR 28790
17-03-17 17:38:46.308 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:46.308 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:46.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:46.458 -07 000000547 INF: FPGA: Recv ZSGSRD 29803
17-03-17 17:38:46.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:46.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:46.468 -07 000000486 INF: FPGA: Recv ZSGSRD 29803
17-03-17 17:38:46.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:46.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:46.478 -07 000000458 INF: FPGA: Recv ZSGSRD 29809
17-03-17 17:38:46.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:46.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:46.488 -07 000000501 INF: FPGA: Recv ZSGSRD 29805
17-03-17 17:38:46.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:46.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:46.498 -07 000000541 INF: FPGA: Recv ZSGSRD 29808
17-03-17 17:38:46.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:46.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:46.508 -07 000000475 INF: FPGA: Recv ZSGSRD 29806
17-03-17 17:38:46.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:46.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:46.518 -07 000000631 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:46.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:46.518 -07 000000475 INF: FPGA: Recv ZSGSRD 29804
17-03-17 17:38:46.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:46.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:46.528 -07 000000424 INF: FPGA: Recv ZSGSRD 29811
17-03-17 17:38:46.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:46.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:46.538 -07 000000486 INF: FPGA: Recv ZSGSRD 29807
17-03-17 17:38:46.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:46.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:46.548 -07 000000547 INF: FPGA: Recv ZSGSRD 29801
17-03-17 17:38:46.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:46.558 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:46.558 -07 000000475 INF: FPGA: Recv ZPIEZORD 25342
17-03-17 17:38:46.568 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:46.568 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.393 V. Piezo Error = -9.8 V.
17-03-17 17:38:46.568 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29806 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29806 (-131.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29801 (-131.0 uncal um), Max = 29811 (-131.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:38:46.568 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29806, posNoise = 5, negNoise = 5
17-03-17 17:38:46.568 -07 000000610 INF: Z Motor: After move to -0.131792, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:46.568 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 17:38:46.568 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:46.568 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:46.568 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:46.568 -07 000000631 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:46.568 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:46.568 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:46.568 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:46.568 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:46.568 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:46.568 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:46.568 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:38:46.568 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:46.578 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 17:38:46.578 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:46.578 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:38:46.578 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:46.588 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 17:38:46.588 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 17:38:46.588 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 17:38:46.588 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 17:38:46.588 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28967 150\n [Camera]
17-03-17 17:38:46.788 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:47.178 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:47.178 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:47.188 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:47.188 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:47.188 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:47.188 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:47.298 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:47.298 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 17:38:47.308 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:47.308 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-17 17:38:47.368 -07 000000475 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.003063,
17-03-17 17:38:47.378 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28967 775
17-03-17 17:38:47.528 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:47.688 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 392 ms.
17-03-17 17:38:47.688 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 17:38:47.688 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:47.698 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:47.698 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 512 ms.
17-03-17 17:38:47.698 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 392 ms.
17-03-17 17:38:47.698 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 17:38:47.698 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:47.698 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:47.708 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 517 ms.
17-03-17 17:38:47.718 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:47.718 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:47.718 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:47.718 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:47.718 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:47.718 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:47.718 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:47.718 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) start.
17-03-17 17:38:47.718 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:47.718 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 1051332656, 0x0, 391868352) start.
17-03-17 17:38:47.908 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:38:47.908 -07 000000547 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:47.908 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28967 150' command took 2 ms to send, 1302 ms to get response, and 1313 ms overall
17-03-17 17:38:47.908 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:38:47.908 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 6 at Y-position 63.224609375, Z-Position -0.131803419108462. ------
17-03-17 17:38:47.918 -07 000000486 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:47.918 -07 000000631 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13813 mm
17-03-17 17:38:47.918 -07 000000631 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:47.918 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:47.918 -07 000000458 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-17 17:38:47.918 -07 000000458 INF: Y Motor: Moving to 64.0626 mm, started at 63.2246 mm, delta = 0.8380 mm
17-03-17 17:38:47.918 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 30174, sync = True, waitForSettling = False)
17-03-17 17:38:47.918 -07 000000501 INF: Z Motor: Moving to -0.138128 mm, started at -0.131803 mm, distance = -6.32 um
17-03-17 17:38:47.928 -07 000000486 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:47.928 -07 000000501 INF: FPGA: Xmit ZDACW 30174\n [Z Motor]
17-03-17 17:38:47.928 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 17:38:47.938 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:47.938 -07 000000501 INF: FPGA: 'ZDACW 30174' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 17:38:47.948 -07 000000486 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:47.958 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:48.118 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 1051332656, 0x0, 391868352) end. Duration was 396 ms.
17-03-17 17:38:48.118 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 17:38:48.118 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:48.118 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) end. Duration was 401 ms.
17-03-17 17:38:48.118 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-17 17:38:48.118 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:48.118 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:48.118 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-17 17:38:48.128 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:48.128 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-17 17:38:48.138 -07 000000475 INF: FPGA: Recv YRDPOS 129485
17-03-17 17:38:48.138 -07 000000475 INF: FPGA: Recv ZDACR 30174
17-03-17 17:38:48.138 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 176 ms to get response, and 206 ms overall
17-03-17 17:38:48.138 -07 000000501 INF: Z Motor: MoveAbsStepped took 221 ms (did NOT wait for settling yet))
17-03-17 17:38:48.138 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 196 ms to get response, and 221 ms overall
17-03-17 17:38:48.138 -07 000000458 INF: Y Motor: Encoder = 129485 = motor step 101160.2 = 63.2251 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:48.148 -07 000000458 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:48.148 -07 000000458 INF: Y Motor: Moving 1340 steps-16
17-03-17 17:38:48.148 -07 000000458 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:48.148 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:48.148 -07 000000486 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 17:38:48.528 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-17 17:38:48.528 -07 000000458 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 378 ms overall
17-03-17 17:38:48.558 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:48.558 -07 000000486 INF: FPGA: Recv YRDPOS 131189
17-03-17 17:38:48.568 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:48.568 -07 000000458 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:48.568 -07 000000458 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-17 17:38:48.568 -07 000000458 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.217 mm/sec
17-03-17 17:38:49.518 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:49.518 -07 000000501 INF: FPGA: Recv YRDPOS 131189
17-03-17 17:38:49.528 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:49.528 -07 000000458 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:49.538 -07 000000458 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:49.538 -07 000000458 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:38:49.538 -07 000000458 INF: Y Motor: Moved to 64.0571 after 1622 ms (table move)
17-03-17 17:38:49.548 -07 000000631 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138128 mm (DAC = 30174)
17-03-17 17:38:49.548 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:49.548 -07 000000486 INF: FPGA: Recv ZSGSRD 30794
17-03-17 17:38:49.558 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:38:49.558 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:49.558 -07 000000501 INF: FPGA: Recv ZSGSRD 30799
17-03-17 17:38:49.568 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:49.568 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:49.568 -07 000000475 INF: FPGA: Recv ZSGSRD 30799
17-03-17 17:38:49.578 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:49.578 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:49.578 -07 000000501 INF: FPGA: Recv ZSGSRD 30784
17-03-17 17:38:49.588 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:49.588 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:49.588 -07 000000486 INF: FPGA: Recv ZSGSRD 30792
17-03-17 17:38:49.598 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:49.598 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:49.598 -07 000000458 INF: FPGA: Recv ZSGSRD 30795
17-03-17 17:38:49.608 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:49.608 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:49.608 -07 000000475 INF: FPGA: Recv ZSGSRD 30789
17-03-17 17:38:49.618 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:49.618 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:49.618 -07 000000501 INF: FPGA: Recv ZSGSRD 30794
17-03-17 17:38:49.628 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:49.628 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:49.628 -07 000000475 INF: FPGA: Recv ZSGSRD 30792
17-03-17 17:38:49.638 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:49.638 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:49.638 -07 000000486 INF: FPGA: Recv ZSGSRD 30802
17-03-17 17:38:49.648 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:49.648 -07 000000631 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:49.648 -07 000000458 INF: FPGA: Recv ZPIEZORD 26645
17-03-17 17:38:49.658 -07 000000631 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:49.658 -07 000000631 INF: Z Motor: Piezo is near 36.9 V (nominally 0 to 100 V), expect near 46.0 V, since DAC is at 4.604 V. Piezo Error = -9.1 V.
17-03-17 17:38:49.658 -07 000000631 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.1 um, Read 10 ADC samples: Avg = 30794 (-137.4 uncal um), Error = 0.8 uncal um, Median = 30794 (-137.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 30784 (-137.3 uncal um), Max = 30802 (-137.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 17:38:49.658 -07 000000631 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30794, posNoise = 8, negNoise = 10
17-03-17 17:38:49.658 -07 000000631 INF: Z Motor: After move to -0.138128, error = -0.000023, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:49.658 -07 000000631 INF: Z Motor: Settle wait time = 1626 ms, measure time = 109 ms (allowed 150 ms), total time = 1735 ms
17-03-17 17:38:49.658 -07 000000631 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:49.708 -07 000000631 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1788 ms
17-03-17 17:38:49.708 -07 000000631 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:49.708 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:49.708 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:49.708 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:49.718 -07 000000475 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:49.718 -07 000000486 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:49.718 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:49.718 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:38:49.718 -07 000000486 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:49.718 -07 000000486 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:49.718 -07 000000486 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:49.728 -07 000000486 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-17 17:38:49.728 -07 000000486 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-17 17:38:49.728 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:49.768 -07 000000631 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:49.968 -07 000000475 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:49.968 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:49.968 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:49.978 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) start.
17-03-17 17:38:50.008 -07 000000631 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:50.008 -07 000000458 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:50.008 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 284 ms overall
17-03-17 17:38:50.088 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) end. Duration was 114 ms.
17-03-17 17:38:50.088 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:50.088 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:38:50.088 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 17:38:50.108 -07 000000631 INF: Autofocus start
17-03-17 17:38:50.108 -07 000000631 INF: MeasureProfile start
17-03-17 17:38:50.108 -07 000000486 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:50.108 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:50.118 -07 000000486 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:38:50.118 -07 000000486 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:50.118 -07 000000631 INF: MeasureProfile done
17-03-17 17:38:50.118 -07 000000631 INF: X=-48  Z correction [um]=-0.2370583
17-03-17 17:38:50.118 -07 000000631 INF: Autofocus finished
17-03-17 17:38:50.318 -07 000000501 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:50.318 -07 000000486 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:38:50.318 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.138150540704522. ----------
17-03-17 17:38:50.328 -07 000000610 INF: Cycle	3	Tile	6	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:50.328 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28635, sync = True, waitForSettling = True)
17-03-17 17:38:50.328 -07 000000610 INF: Z Motor: Moving to -0.131083 mm, started at -0.138151 mm, distance = 7.07 um
17-03-17 17:38:50.328 -07 000000610 INF: FPGA: Xmit ZDACW 28635\n [Z Motor]
17-03-17 17:38:50.328 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 17:38:50.338 -07 000000610 INF: FPGA: 'ZDACW 28635' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:50.338 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:50.338 -07 000000631 INF: FPGA: Recv ZDACR 28635
17-03-17 17:38:50.348 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:50.348 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:50.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:50.498 -07 000000501 INF: FPGA: Recv ZSGSRD 29693
17-03-17 17:38:50.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:50.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:50.508 -07 000000631 INF: FPGA: Recv ZSGSRD 29699
17-03-17 17:38:50.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:50.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:50.518 -07 000000501 INF: FPGA: Recv ZSGSRD 29690
17-03-17 17:38:50.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:50.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:50.528 -07 000000631 INF: FPGA: Recv ZSGSRD 29695
17-03-17 17:38:50.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:50.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:50.538 -07 000000475 INF: FPGA: Recv ZSGSRD 29693
17-03-17 17:38:50.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:50.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:50.548 -07 000000458 INF: FPGA: Recv ZSGSRD 29693
17-03-17 17:38:50.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:50.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:50.558 -07 000000501 INF: FPGA: Recv ZSGSRD 29699
17-03-17 17:38:50.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:50.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:50.568 -07 000000631 INF: FPGA: Recv ZSGSRD 29691
17-03-17 17:38:50.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:50.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:50.578 -07 000000501 INF: FPGA: Recv ZSGSRD 29696
17-03-17 17:38:50.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:50.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:50.588 -07 000000631 INF: FPGA: Recv ZSGSRD 29696
17-03-17 17:38:50.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:50.598 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:50.598 -07 000000475 INF: FPGA: Recv ZPIEZORD 25192
17-03-17 17:38:50.608 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:50.608 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.369 V. Piezo Error = -9.9 V.
17-03-17 17:38:50.608 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.1 um, Read 10 ADC samples: Avg = 29694 (-130.3 uncal um), Error = 0.8 uncal um, Median = 29694 (-130.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29690 (-130.3 uncal um), Max = 29699 (-130.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 17:38:50.608 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29694, posNoise = 5, negNoise = 4
17-03-17 17:38:50.608 -07 000000610 INF: Z Motor: After move to -0.131083, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:50.608 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-17 17:38:50.608 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:50.608 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:50.608 -07 000000458 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:50.608 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:50.608 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:50.608 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:50.608 -07 000000631 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:50.608 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:50.608 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:50.608 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 17:38:50.608 -07 000000631 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:50.608 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:50.608 -07 000000631 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:38:50.608 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:50.618 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:50.618 -07 000000631 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:50.628 -07 000000631 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 17:38:50.628 -07 000000631 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 17:38:50.628 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-17 17:38:50.628 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 17:38:50.628 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28812 150\n [Camera]
17-03-17 17:38:50.828 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:51.218 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:51.218 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:51.218 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:51.218 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:51.218 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1143991736, 0x0, 391868352) start.
17-03-17 17:38:51.218 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:51.218 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:51.218 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:51.218 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:51.218 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 17:38:51.408 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28812 775
17-03-17 17:38:51.518 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:51.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:51.558 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:51.598 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1143991736, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 17:38:51.598 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:38:51.598 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:51.598 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 17:38:51.598 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 17:38:51.598 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:51.598 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:51.598 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 17:38:51.598 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:38:51.608 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 17:38:51.748 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:51.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:51.748 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:51.748 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:51.748 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 17:38:51.748 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:51.748 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:51.748 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:51.748 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:51.748 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:38:51.938 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:38:51.938 -07 000000429 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:51.938 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28812 150' command took 2 ms to send, 1307 ms to get response, and 1312 ms overall
17-03-17 17:38:51.938 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:38:51.938 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.05712890625, Z-Position -0.131083907348585. ------
17-03-17 17:38:51.948 -07 000000623 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:51.948 -07 000000486 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13756 mm
17-03-17 17:38:51.948 -07 000000486 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:51.948 -07 000000431 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-17 17:38:51.948 -07 000000431 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-17 17:38:51.948 -07 000000458 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:51.948 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 30051, sync = True, waitForSettling = False)
17-03-17 17:38:51.948 -07 000000429 INF: Z Motor: Moving to -0.137565 mm, started at -0.131084 mm, distance = -6.48 um
17-03-17 17:38:51.958 -07 000000623 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:38:51.958 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:51.958 -07 000000627 INF: FPGA: Recv YRDPOS 131190
17-03-17 17:38:51.968 -07 000000429 INF: FPGA: Xmit ZDACW 30051\n [Z Motor]
17-03-17 17:38:51.968 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 17:38:51.968 -07 000000431 INF: Y Motor: Encoder = 131190 = motor step 102492.2 = 64.0576 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:51.968 -07 000000631 INF: FPGA: Recv ZDACW
17-03-17 17:38:51.968 -07 000000431 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:51.968 -07 000000431 INF: Y Motor: Moving 1336 steps-11
17-03-17 17:38:51.978 -07 000000623 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:51.978 -07 000000429 INF: FPGA: 'ZDACW 30051' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-17 17:38:51.988 -07 000000431 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:51.998 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:51.998 -07 000000608 INF: FPGA: Recv ZDACR 30051
17-03-17 17:38:52.008 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:38:52.008 -07 000000429 INF: Z Motor: MoveAbsStepped took 50 ms (did NOT wait for settling yet))
17-03-17 17:38:52.138 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 382 ms.
17-03-17 17:38:52.138 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 17:38:52.138 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:52.138 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 17:38:52.138 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 17:38:52.138 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:52.138 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:52.138 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:38:52.138 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-17 17:38:52.148 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 17:38:52.178 -07 000000448 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:52.178 -07 000000623 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 17:38:52.358 -07 000000482 INF: FPGA: Recv YMVTILE
17-03-17 17:38:52.368 -07 000000431 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 397 ms overall
17-03-17 17:38:52.388 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:52.398 -07 000000458 INF: FPGA: Recv YRDPOS 132873
17-03-17 17:38:52.398 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 17:38:52.398 -07 000000431 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:52.398 -07 000000431 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 17:38:52.398 -07 000000431 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.835 mm, average velocity = 2.104 mm/sec
17-03-17 17:38:52.728 -07 000000442 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.005817,
17-03-17 17:38:53.348 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:53.348 -07 000000458 INF: FPGA: Recv YRDPOS 132873
17-03-17 17:38:53.358 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:53.358 -07 000000431 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:53.378 -07 000000431 INF: Y Motor: After move to 64.892609, error = -0.013214, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:53.378 -07 000000431 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:38:53.378 -07 000000431 INF: Y Motor: Moved to 64.8794 after 1424 ms (table move)
17-03-17 17:38:53.378 -07 000000486 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137565 mm (DAC = 30051)
17-03-17 17:38:53.378 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:53.378 -07 000000429 INF: FPGA: Recv ZSGSRD 30714
17-03-17 17:38:53.388 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:53.388 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:53.388 -07 000000431 INF: FPGA: Recv ZSGSRD 30701
17-03-17 17:38:53.398 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:53.398 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:53.398 -07 000000608 INF: FPGA: Recv ZSGSRD 30703
17-03-17 17:38:53.408 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:53.408 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:53.408 -07 000000431 INF: FPGA: Recv ZSGSRD 30709
17-03-17 17:38:53.418 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:53.418 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:53.418 -07 000000608 INF: FPGA: Recv ZSGSRD 30705
17-03-17 17:38:53.428 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:53.428 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:53.428 -07 000000429 INF: FPGA: Recv ZSGSRD 30704
17-03-17 17:38:53.438 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:53.438 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:53.438 -07 000000429 INF: FPGA: Recv ZSGSRD 30697
17-03-17 17:38:53.448 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:53.448 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:53.448 -07 000000431 INF: FPGA: Recv ZSGSRD 30698
17-03-17 17:38:53.458 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:53.458 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:53.458 -07 000000429 INF: FPGA: Recv ZSGSRD 30701
17-03-17 17:38:53.468 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:53.468 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:53.468 -07 000000431 INF: FPGA: Recv ZSGSRD 30703
17-03-17 17:38:53.478 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:53.478 -07 000000486 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:53.478 -07 000000429 INF: FPGA: Recv ZPIEZORD 26563
17-03-17 17:38:53.488 -07 000000486 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:53.488 -07 000000486 INF: Z Motor: Piezo is near 36.7 V (nominally 0 to 100 V), expect near 45.9 V, since DAC is at 4.585 V. Piezo Error = -9.1 V.
17-03-17 17:38:53.488 -07 000000486 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.6 um, Read 10 ADC samples: Avg = 30704 (-136.8 uncal um), Error = 0.8 uncal um, Median = 30703 (-136.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 30697 (-136.7 uncal um), Max = 30714 (-136.8 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 17:38:53.488 -07 000000486 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30704, posNoise = 10, negNoise = 7
17-03-17 17:38:53.488 -07 000000486 INF: Z Motor: After move to -0.137565, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:53.488 -07 000000486 INF: Z Motor: Settle wait time = 1423 ms, measure time = 107 ms (allowed 150 ms), total time = 1530 ms
17-03-17 17:38:53.488 -07 000000486 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:53.538 -07 000000486 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1587 ms
17-03-17 17:38:53.538 -07 000000486 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:53.538 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:53.538 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:53.538 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:53.538 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:53.538 -07 000000486 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:53.538 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:53.538 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 17:38:53.538 -07 000000486 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:53.548 -07 000000486 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 17:38:53.548 -07 000000486 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:53.548 -07 000000486 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 17:38:53.548 -07 000000486 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 13 ms.
17-03-17 17:38:53.558 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:53.598 -07 000000608 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:53.798 -07 000000431 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:53.798 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:53.798 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:53.798 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2270629648, 0x0, 559484976) start.
17-03-17 17:38:53.838 -07 000000458 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:53.838 -07 000000608 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:53.838 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 277 ms to get response, and 284 ms overall
17-03-17 17:38:53.918 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2270629648, 0x0, 559484976) end. Duration was 117 ms.
17-03-17 17:38:53.918 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:53.918 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:38:53.918 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-17 17:38:53.938 -07 000000486 INF: Autofocus start
17-03-17 17:38:53.938 -07 000000486 INF: MeasureProfile start
17-03-17 17:38:53.938 -07 000000429 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:53.938 -07 000000431 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:53.948 -07 000000429 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:38:53.948 -07 000000429 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:53.948 -07 000000486 INF: MeasureProfile done
17-03-17 17:38:53.948 -07 000000486 INF: X=16  Z correction [um]=0.0530179
17-03-17 17:38:53.948 -07 000000486 INF: Autofocus finished
17-03-17 17:38:54.148 -07 000000608 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:54.148 -07 000000429 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:38:54.148 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87939453125, Z-position -0.137572361611763. ----------
17-03-17 17:38:54.148 -07 000000610 INF: Cycle	3	Tile	7	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:54.158 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28575, sync = True, waitForSettling = True)
17-03-17 17:38:54.158 -07 000000610 INF: Z Motor: Moving to -0.130808 mm, started at -0.137572 mm, distance = 6.76 um
17-03-17 17:38:54.158 -07 000000610 INF: FPGA: Xmit ZDACW 28575\n [Z Motor]
17-03-17 17:38:54.158 -07 000000486 INF: FPGA: Recv ZDACW
17-03-17 17:38:54.168 -07 000000610 INF: FPGA: 'ZDACW 28575' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:38:54.168 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:54.168 -07 000000458 INF: FPGA: Recv ZDACR 28575
17-03-17 17:38:54.178 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:54.178 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:54.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:54.328 -07 000000458 INF: FPGA: Recv ZSGSRD 29657
17-03-17 17:38:54.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:54.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:54.338 -07 000000608 INF: FPGA: Recv ZSGSRD 29653
17-03-17 17:38:54.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:54.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:54.348 -07 000000431 INF: FPGA: Recv ZSGSRD 29651
17-03-17 17:38:54.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:54.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:54.358 -07 000000429 INF: FPGA: Recv ZSGSRD 29650
17-03-17 17:38:54.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:54.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:54.368 -07 000000608 INF: FPGA: Recv ZSGSRD 29651
17-03-17 17:38:54.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:54.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:54.378 -07 000000431 INF: FPGA: Recv ZSGSRD 29652
17-03-17 17:38:54.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:54.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:54.388 -07 000000486 INF: FPGA: Recv ZSGSRD 29653
17-03-17 17:38:54.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:54.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:54.398 -07 000000429 INF: FPGA: Recv ZSGSRD 29654
17-03-17 17:38:54.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:54.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:54.408 -07 000000608 INF: FPGA: Recv ZSGSRD 29655
17-03-17 17:38:54.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:54.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:54.418 -07 000000486 INF: FPGA: Recv ZSGSRD 29653
17-03-17 17:38:54.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:54.428 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:54.428 -07 000000458 INF: FPGA: Recv ZPIEZORD 25186
17-03-17 17:38:54.438 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:54.438 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.360 V. Piezo Error = -9.8 V.
17-03-17 17:38:54.438 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.8 um, Read 10 ADC samples: Avg = 29653 (-130.0 uncal um), Error = 0.8 uncal um, Median = 29653 (-130.0 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29650 (-130.0 uncal um), Max = 29657 (-130.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 17:38:54.438 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29653, posNoise = 4, negNoise = 3
17-03-17 17:38:54.438 -07 000000610 INF: Z Motor: After move to -0.130808, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:54.438 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 17:38:54.438 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:54.438 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:54.438 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:54.438 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:54.438 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:54.438 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:54.438 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:54.438 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:54.438 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-17 17:38:54.438 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:54.438 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 17:38:54.438 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:54.448 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:38:54.448 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:54.448 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:54.448 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:54.448 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:38:54.448 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:38:54.458 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:38:54.458 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 17:38:54.458 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28752 150\n [Camera]
17-03-17 17:38:54.658 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:55.048 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:55.048 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:55.048 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:55.048 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:55.048 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1428998304, 0x0, 391868352) start.
17-03-17 17:38:55.048 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:55.048 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:55.048 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:55.048 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:55.048 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1464420568, 0x0, 418435064) start.
17-03-17 17:38:55.238 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28752 775
17-03-17 17:38:55.388 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 928
17-03-17 17:38:55.418 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1464420568, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 17:38:55.418 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 17:38:55.418 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:55.428 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:55.428 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1428998304, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 17:38:55.428 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 17:38:55.428 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:55.428 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:55.428 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 17:38:55.428 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 17:38:55.578 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:55.578 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:55.578 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:55.578 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:55.578 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:55.578 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 17:38:55.578 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:55.578 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:55.578 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:55.578 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 17:38:55.768 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:38:55.768 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:55.768 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28752 150' command took 2 ms to send, 1305 ms to get response, and 1312 ms overall
17-03-17 17:38:55.768 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:38:55.768 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87939453125, Z-Position -0.130820514650773. ------
17-03-17 17:38:55.778 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:55.778 -07 000000486 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13745 mm
17-03-17 17:38:55.778 -07 000000486 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:55.778 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:55.778 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-17 17:38:55.778 -07 000000429 INF: Y Motor: Moving to 65.7226 mm, started at 64.8794 mm, delta = 0.8432 mm
17-03-17 17:38:55.778 -07 000000431 INF: Z Motor: Entering MoveAbsStepped (DAC = 30025, sync = True, waitForSettling = False)
17-03-17 17:38:55.778 -07 000000431 INF: Z Motor: Moving to -0.137446 mm, started at -0.130821 mm, distance = -6.63 um
17-03-17 17:38:55.788 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:55.788 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:55.788 -07 000000608 INF: FPGA: Recv YRDPOS 132873
17-03-17 17:38:55.798 -07 000000431 INF: FPGA: Xmit ZDACW 30025\n [Z Motor]
17-03-17 17:38:55.798 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 17:38:55.798 -07 000000429 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:55.798 -07 000000429 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:55.798 -07 000000429 INF: Y Motor: Moving 1349 steps-27
17-03-17 17:38:55.918 -07 000000618 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:55.918 -07 000000541 INF: FPGA: Recv ZDACW
17-03-17 17:38:55.918 -07 000000431 INF: FPGA: 'ZDACW 30025' command took 0 ms to send, 0 ms to get response, and 138 ms overall
17-03-17 17:38:55.928 -07 000000431 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:55.928 -07 000000627 INF: FPGA: Recv ZDACR 30025
17-03-17 17:38:55.938 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:55.938 -07 000000431 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 17:38:55.938 -07 000000431 INF: Z Motor: MoveAbsStepped took 156 ms (did NOT wait for settling yet))
17-03-17 17:38:55.968 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 392 ms.
17-03-17 17:38:55.968 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 17:38:55.978 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:55.978 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 394 ms.
17-03-17 17:38:55.978 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 17:38:55.978 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:55.978 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:55.978 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 17:38:55.978 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-17 17:38:55.988 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 17:38:56.118 -07 000000433 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:56.118 -07 000000618 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 334 ms overall
17-03-17 17:38:56.308 -07 000000458 INF: FPGA: Recv YMVTILE
17-03-17 17:38:56.308 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 17:38:56.338 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:56.348 -07 000000431 INF: FPGA: Recv YRDPOS 134584
17-03-17 17:38:56.348 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 17:38:56.348 -07 000000429 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:56.348 -07 000000429 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-17 17:38:56.348 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 517 ms, distance = 0.843 mm, average velocity = 1.631 mm/sec
17-03-17 17:38:56.518 -07 000000448 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:38:56.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:38:57.298 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:57.298 -07 000000482 INF: FPGA: Recv YRDPOS 134584
17-03-17 17:38:57.308 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:57.308 -07 000000429 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:57.328 -07 000000429 INF: Y Motor: After move to 65.722610, error = -0.007767, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:38:57.328 -07 000000429 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:38:57.328 -07 000000429 INF: Y Motor: Moved to 65.7148 after 1546 ms (table move)
17-03-17 17:38:57.328 -07 000000486 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137446 mm (DAC = 30025)
17-03-17 17:38:57.328 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:57.328 -07 000000448 INF: FPGA: Recv ZSGSRD 30683
17-03-17 17:38:57.338 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:57.338 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:57.338 -07 000000547 INF: FPGA: Recv ZSGSRD 30679
17-03-17 17:38:57.348 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:57.348 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:57.348 -07 000000627 INF: FPGA: Recv ZSGSRD 30681
17-03-17 17:38:57.358 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:57.358 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:57.358 -07 000000623 INF: FPGA: Recv ZSGSRD 30691
17-03-17 17:38:57.368 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:57.368 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:57.368 -07 000000623 INF: FPGA: Recv ZSGSRD 30690
17-03-17 17:38:57.378 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:57.378 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:57.378 -07 000000429 INF: FPGA: Recv ZSGSRD 30689
17-03-17 17:38:57.388 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:57.388 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:57.388 -07 000000409 INF: FPGA: Recv ZSGSRD 30676
17-03-17 17:38:57.398 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:57.398 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:57.398 -07 000000424 INF: FPGA: Recv ZSGSRD 30684
17-03-17 17:38:57.408 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:57.408 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:57.408 -07 000000547 INF: FPGA: Recv ZSGSRD 30681
17-03-17 17:38:57.418 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:57.418 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:57.418 -07 000000431 INF: FPGA: Recv ZSGSRD 30678
17-03-17 17:38:57.428 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:57.428 -07 000000486 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:57.428 -07 000000626 INF: FPGA: Recv ZPIEZORD 26530
17-03-17 17:38:57.438 -07 000000486 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:57.438 -07 000000486 INF: Z Motor: Piezo is near 36.7 V (nominally 0 to 100 V), expect near 45.8 V, since DAC is at 4.582 V. Piezo Error = -9.1 V.
17-03-17 17:38:57.438 -07 000000486 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.4 um, Read 10 ADC samples: Avg = 30683 (-136.6 uncal um), Error = 0.8 uncal um, Median = 30682 (-136.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30676 (-136.6 uncal um), Max = 30691 (-136.7 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 17:38:57.438 -07 000000486 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30683, posNoise = 8, negNoise = 7
17-03-17 17:38:57.438 -07 000000486 INF: Z Motor: After move to -0.137446, error = 0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:57.438 -07 000000486 INF: Z Motor: Settle wait time = 1549 ms, measure time = 107 ms (allowed 150 ms), total time = 1656 ms
17-03-17 17:38:57.438 -07 000000486 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 17:38:57.488 -07 000000486 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1709 ms
17-03-17 17:38:57.488 -07 000000486 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:38:57.488 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:57.488 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:57.488 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:57.488 -07 000000448 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:57.488 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:38:57.488 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:57.488 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:57.488 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:38:57.488 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:38:57.498 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:38:57.508 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 17:38:57.508 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-17 17:38:57.508 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:38:57.558 -07 000000409 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:38:57.748 -07 000000541 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:38:57.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:38:57.758 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:38:57.758 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-17 17:38:57.788 -07 000000482 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:38:57.788 -07 000000486 INF: FPGA: Recv CAMSNAP
17-03-17 17:38:57.798 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 285 ms overall
17-03-17 17:38:57.878 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 125 ms.
17-03-17 17:38:57.878 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:57.878 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:38:57.878 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-17 17:38:57.898 -07 000000409 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:57.898 -07 000000429 INF: Autofocus start
17-03-17 17:38:57.898 -07 000000429 INF: MeasureProfile start
17-03-17 17:38:57.898 -07 000000486 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:57.908 -07 000000409 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:38:57.908 -07 000000409 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:38:57.908 -07 000000429 INF: MeasureProfile done
17-03-17 17:38:57.908 -07 000000429 INF: X=16  Z correction [um]=0.0530179
17-03-17 17:38:57.908 -07 000000429 INF: Autofocus finished
17-03-17 17:38:58.088 -07 000000623 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.015368,
17-03-17 17:38:58.108 -07 000000429 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:38:58.108 -07 000000409 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:38:58.108 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71484375, Z-position -0.137437453156786. ----------
17-03-17 17:38:58.108 -07 000000610 INF: Cycle	3	Tile	8	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:38:58.118 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28549, sync = True, waitForSettling = True)
17-03-17 17:38:58.118 -07 000000610 INF: Z Motor: Moving to -0.130689 mm, started at -0.137437 mm, distance = 6.75 um
17-03-17 17:38:58.128 -07 000000610 INF: FPGA: Xmit ZDACW 28549\n [Z Motor]
17-03-17 17:38:58.128 -07 000000448 INF: FPGA: Recv ZDACW
17-03-17 17:38:58.138 -07 000000610 INF: FPGA: 'ZDACW 28549' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 17:38:58.138 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:58.138 -07 000000627 INF: FPGA: Recv ZDACR 28549
17-03-17 17:38:58.148 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:58.148 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:38:58.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:58.298 -07 000000486 INF: FPGA: Recv ZSGSRD 29635
17-03-17 17:38:58.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:38:58.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:58.308 -07 000000501 INF: FPGA: Recv ZSGSRD 29626
17-03-17 17:38:58.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:58.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:58.318 -07 000000627 INF: FPGA: Recv ZSGSRD 29636
17-03-17 17:38:58.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:58.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:58.328 -07 000000608 INF: FPGA: Recv ZSGSRD 29636
17-03-17 17:38:58.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:58.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:58.338 -07 000000627 INF: FPGA: Recv ZSGSRD 29635
17-03-17 17:38:58.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:58.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:58.348 -07 000000608 INF: FPGA: Recv ZSGSRD 29634
17-03-17 17:38:58.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:58.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:58.358 -07 000000627 INF: FPGA: Recv ZSGSRD 29637
17-03-17 17:38:58.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:58.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:58.368 -07 000000608 INF: FPGA: Recv ZSGSRD 29636
17-03-17 17:38:58.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:58.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:58.378 -07 000000627 INF: FPGA: Recv ZSGSRD 29634
17-03-17 17:38:58.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:58.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:38:58.388 -07 000000608 INF: FPGA: Recv ZSGSRD 29631
17-03-17 17:38:58.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:58.398 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:38:58.398 -07 000000409 INF: FPGA: Recv ZPIEZORD 25187
17-03-17 17:38:58.408 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:38:58.408 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.356 V. Piezo Error = -9.8 V.
17-03-17 17:38:58.408 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29634 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29635 (-129.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29626 (-129.9 uncal um), Max = 29637 (-129.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 17:38:58.408 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29634, posNoise = 3, negNoise = 8
17-03-17 17:38:58.408 -07 000000610 INF: Z Motor: After move to -0.130689, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:38:58.408 -07 000000610 INF: Z Motor: MoveAbsStepped took 289 ms)
17-03-17 17:38:58.408 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:38:58.408 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:38:58.408 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:38:58.408 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:38:58.418 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:38:58.418 -07 000000486 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:38:58.418 -07 000000409 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:38:58.418 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:38:58.418 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:38:58.418 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:38:58.418 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:38:58.418 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:38:58.418 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:38:58.418 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:38:58.418 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:38:58.418 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:38:58.428 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 17:38:58.428 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:38:58.428 -07 000000409 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:38:58.428 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:38:58.428 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28726 150\n [Camera]
17-03-17 17:38:58.628 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:38:59.018 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:38:59.018 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:38:59.018 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:59.018 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:38:59.018 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:38:59.028 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:59.028 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:59.028 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1051332656, 0x0, 391868352) start.
17-03-17 17:38:59.028 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:59.028 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:38:59.208 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28726 775
17-03-17 17:38:59.358 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:38:59.398 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1051332656, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 17:38:59.398 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-17 17:38:59.398 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:59.398 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:38:59.398 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:38:59.408 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 17:38:59.408 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 17:38:59.408 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:38:59.408 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 17:38:59.418 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 17:38:59.548 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:38:59.548 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:38:59.548 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:38:59.558 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:38:59.558 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:38:59.558 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:38:59.668 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:38:59.668 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 17:38:59.678 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:38:59.678 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 17:38:59.738 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:38:59.738 -07 000000486 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:38:59.738 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28726 150' command took 2 ms to send, 1309 ms to get response, and 1312 ms overall
17-03-17 17:38:59.748 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:38:59.748 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 9 at Y-position 65.71484375, Z-Position -0.130698454620079. ------
17-03-17 17:38:59.748 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:38:59.748 -07 000000409 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13699 mm
17-03-17 17:38:59.748 -07 000000409 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:38:59.748 -07 000000631 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:38:59.748 -07 000000608 INF: Z Motor: Entering MoveAbsStepped (DAC = 29925, sync = True, waitForSettling = False)
17-03-17 17:38:59.748 -07 000000608 INF: Z Motor: Moving to -0.136988 mm, started at -0.130698 mm, distance = -6.29 um
17-03-17 17:38:59.748 -07 000000486 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-17 17:38:59.748 -07 000000486 INF: Y Motor: Moving to 66.5526 mm, started at 65.7148 mm, delta = 0.8378 mm
17-03-17 17:38:59.758 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:38:59.758 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:38:59.758 -07 000000475 INF: FPGA: Recv YRDPOS 134584
17-03-17 17:38:59.768 -07 000000608 INF: FPGA: Xmit ZDACW 29925\n [Z Motor]
17-03-17 17:38:59.768 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 17:38:59.768 -07 000000486 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:38:59.768 -07 000000486 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:38:59.768 -07 000000486 INF: Y Motor: Moving 1340 steps-16
17-03-17 17:38:59.768 -07 000000442 INF: FPGA: Recv ZDACW
17-03-17 17:38:59.778 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:38:59.778 -07 000000608 INF: FPGA: 'ZDACW 29925' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-17 17:38:59.788 -07 000000486 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:38:59.798 -07 000000608 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:38:59.798 -07 000000475 INF: FPGA: Recv ZDACR 29925
17-03-17 17:38:59.808 -07 000000608 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:38:59.808 -07 000000608 INF: Z Motor: MoveAbsStepped took 52 ms (did NOT wait for settling yet))
17-03-17 17:38:59.978 -07 000000458 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:38:59.978 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 17:39:00.048 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 17:39:00.048 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 17:39:00.048 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:00.048 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 374 ms.
17-03-17 17:39:00.048 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-17 17:39:00.048 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:00.048 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:00.058 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:00.058 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 502 ms.
17-03-17 17:39:00.058 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 503 ms.
17-03-17 17:39:00.168 -07 000000631 INF: FPGA: Recv YMVTILE
17-03-17 17:39:00.168 -07 000000486 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 401 ms overall
17-03-17 17:39:00.198 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:00.198 -07 000000501 INF: FPGA: Recv YRDPOS 136273
17-03-17 17:39:00.208 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:00.208 -07 000000486 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:00.208 -07 000000486 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 17:39:00.208 -07 000000486 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 401 ms, distance = 0.838 mm, average velocity = 2.089 mm/sec
17-03-17 17:39:01.158 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:01.158 -07 000000608 INF: FPGA: Recv YRDPOS 136273
17-03-17 17:39:01.168 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.168 -07 000000486 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:01.178 -07 000000486 INF: Y Motor: After move to 66.552605, error = -0.013054, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:39:01.188 -07 000000486 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:39:01.188 -07 000000486 INF: Y Motor: Moved to 66.5396 after 1432 ms (table move)
17-03-17 17:39:01.188 -07 000000409 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136988 mm (DAC = 29925)
17-03-17 17:39:01.188 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:01.188 -07 000000442 INF: FPGA: Recv ZSGSRD 30617
17-03-17 17:39:01.198 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:01.198 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:01.198 -07 000000442 INF: FPGA: Recv ZSGSRD 30614
17-03-17 17:39:01.208 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.208 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:01.208 -07 000000442 INF: FPGA: Recv ZSGSRD 30610
17-03-17 17:39:01.218 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.218 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:01.218 -07 000000442 INF: FPGA: Recv ZSGSRD 30606
17-03-17 17:39:01.228 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.228 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:01.228 -07 000000486 INF: FPGA: Recv ZSGSRD 30611
17-03-17 17:39:01.238 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.238 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:01.238 -07 000000608 INF: FPGA: Recv ZSGSRD 30618
17-03-17 17:39:01.248 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.248 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:01.248 -07 000000547 INF: FPGA: Recv ZSGSRD 30611
17-03-17 17:39:01.258 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.258 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:01.258 -07 000000627 INF: FPGA: Recv ZSGSRD 30624
17-03-17 17:39:01.268 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.268 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:01.268 -07 000000627 INF: FPGA: Recv ZSGSRD 30616
17-03-17 17:39:01.278 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.278 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:01.278 -07 000000627 INF: FPGA: Recv ZSGSRD 30616
17-03-17 17:39:01.288 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.288 -07 000000409 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:01.288 -07 000000631 INF: FPGA: Recv ZPIEZORD 26482
17-03-17 17:39:01.298 -07 000000409 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.298 -07 000000409 INF: Z Motor: Piezo is near 36.6 V (nominally 0 to 100 V), expect near 45.7 V, since DAC is at 4.566 V. Piezo Error = -9.1 V.
17-03-17 17:39:01.298 -07 000000409 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.0 um, Read 10 ADC samples: Avg = 30614 (-136.2 uncal um), Error = 0.8 uncal um, Median = 30615 (-136.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 30606 (-136.1 uncal um), Max = 30624 (-136.3 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 17:39:01.298 -07 000000409 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30614, posNoise = 10, negNoise = 8
17-03-17 17:39:01.298 -07 000000409 INF: Z Motor: After move to -0.136988, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:01.298 -07 000000409 INF: Z Motor: Settle wait time = 1435 ms, measure time = 109 ms (allowed 150 ms), total time = 1544 ms
17-03-17 17:39:01.298 -07 000000409 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-17 17:39:01.348 -07 000000409 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1595 ms
17-03-17 17:39:01.348 -07 000000409 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:39:01.348 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:01.348 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:01.348 -07 000000475 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:01.348 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:01.348 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:39:01.348 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:01.348 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:01.348 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:39:01.358 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 17:39:01.358 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:39:01.368 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 17:39:01.368 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-17 17:39:01.368 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:39:01.418 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:39:01.518 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:39:01.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:39:01.618 -07 000000486 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:39:01.618 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:39:01.618 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:39:01.618 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-17 17:39:01.658 -07 000000433 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:39:01.658 -07 000000547 INF: FPGA: Recv CAMSNAP
17-03-17 17:39:01.658 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 282 ms to get response, and 285 ms overall
17-03-17 17:39:01.748 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 17:39:01.748 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:01.748 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:39:01.748 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-17 17:39:01.758 -07 000000448 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:01.758 -07 000000608 INF: Autofocus start
17-03-17 17:39:01.758 -07 000000608 INF: MeasureProfile start
17-03-17 17:39:01.758 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:01.768 -07 000000448 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:01.768 -07 000000448 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:39:01.768 -07 000000608 INF: MeasureProfile done
17-03-17 17:39:01.768 -07 000000608 INF: X=0  Z correction [um]=-0.02394831
17-03-17 17:39:01.768 -07 000000608 INF: Autofocus finished
17-03-17 17:39:01.968 -07 000000409 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:39:01.968 -07 000000448 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:39:01.968 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53955078125, Z-position -0.136994182519005. ----------
17-03-17 17:39:01.968 -07 000000610 INF: Cycle	3	Tile	9	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:39:01.978 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28432, sync = True, waitForSettling = True)
17-03-17 17:39:01.978 -07 000000610 INF: Z Motor: Moving to -0.130153 mm, started at -0.136994 mm, distance = 6.84 um
17-03-17 17:39:01.978 -07 000000610 INF: FPGA: Xmit ZDACW 28432\n [Z Motor]
17-03-17 17:39:01.978 -07 000000442 INF: FPGA: Recv ZDACW
17-03-17 17:39:01.988 -07 000000610 INF: FPGA: 'ZDACW 28432' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.988 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:01.988 -07 000000486 INF: FPGA: Recv ZDACR 28432
17-03-17 17:39:01.998 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:01.998 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:39:02.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:02.148 -07 000000627 INF: FPGA: Recv ZSGSRD 29553
17-03-17 17:39:02.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:02.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:02.158 -07 000000486 INF: FPGA: Recv ZSGSRD 29559
17-03-17 17:39:02.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:02.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:02.168 -07 000000433 INF: FPGA: Recv ZSGSRD 29554
17-03-17 17:39:02.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:02.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:02.178 -07 000000486 INF: FPGA: Recv ZSGSRD 29550
17-03-17 17:39:02.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:02.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:02.188 -07 000000608 INF: FPGA: Recv ZSGSRD 29552
17-03-17 17:39:02.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:02.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:02.198 -07 000000433 INF: FPGA: Recv ZSGSRD 29547
17-03-17 17:39:02.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:02.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:02.208 -07 000000608 INF: FPGA: Recv ZSGSRD 29553
17-03-17 17:39:02.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:02.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:02.218 -07 000000547 INF: FPGA: Recv ZSGSRD 29550
17-03-17 17:39:02.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:02.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:02.228 -07 000000608 INF: FPGA: Recv ZSGSRD 29544
17-03-17 17:39:02.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:02.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:02.238 -07 000000547 INF: FPGA: Recv ZSGSRD 29553
17-03-17 17:39:02.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:02.248 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:02.248 -07 000000501 INF: FPGA: Recv ZPIEZORD 25073
17-03-17 17:39:02.258 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:02.258 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.338 V. Piezo Error = -9.8 V.
17-03-17 17:39:02.258 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.2 um, Read 10 ADC samples: Avg = 29552 (-129.4 uncal um), Error = 0.8 uncal um, Median = 29552 (-129.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29544 (-129.3 uncal um), Max = 29559 (-129.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 17:39:02.258 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29552, posNoise = 7, negNoise = 8
17-03-17 17:39:02.258 -07 000000610 INF: Z Motor: After move to -0.130153, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:02.258 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 17:39:02.258 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:02.258 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:02.258 -07 000000631 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:02.258 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:39:02.258 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:02.258 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:39:02.258 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:39:02.258 -07 000000409 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:02.258 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:02.258 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:39:02.258 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 17:39:02.258 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:39:02.258 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:39:02.258 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:39:02.258 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:39:02.268 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:39:02.278 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 17:39:02.278 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 17:39:02.278 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 17:39:02.278 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 17:39:02.278 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28609 150\n [Camera]
17-03-17 17:39:02.478 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:39:02.868 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:39:02.868 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:39:02.868 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:02.878 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:39:02.878 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:39:02.878 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:02.878 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:02.878 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1060143264, 0x0, 391868352) start.
17-03-17 17:39:02.878 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:02.878 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:39:03.068 -07 000000442 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28609 775
17-03-17 17:39:03.208 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:39:03.248 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1060143264, 0x0, 391868352) end. Duration was 374 ms.
17-03-17 17:39:03.248 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-17 17:39:03.248 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:03.248 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 17:39:03.248 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 17:39:03.248 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:03.258 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:03.258 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 17:39:03.258 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:03.268 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 17:39:03.408 -07 000000442 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115
17-03-17 17:39:03.408 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115
17-03-17 17:39:03.408 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:03.408 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:03.408 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) start.
17-03-17 17:39:03.408 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115
17-03-17 17:39:03.408 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115
17-03-17 17:39:03.408 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:03.408 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:03.408 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 1135181128, 0x0, 418435064) start.
17-03-17 17:39:03.448 -07 000000442 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.011254,
17-03-17 17:39:03.588 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:39:03.598 -07 000000442 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:39:03.598 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28609 150' command took 2 ms to send, 1300 ms to get response, and 1312 ms overall
17-03-17 17:39:03.598 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:39:03.598 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 10 at Y-position 66.53955078125, Z-Position -0.130171669224455. ------
17-03-17 17:39:03.598 -07 000000475 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:03.598 -07 000000442 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13695 mm
17-03-17 17:39:03.598 -07 000000442 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:39:03.598 -07 000000631 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-17 17:39:03.598 -07 000000631 INF: Y Motor: Moving to 67.3826 mm, started at 66.5396 mm, delta = 0.8431 mm
17-03-17 17:39:03.598 -07 000000486 INF: Z Motor: Entering MoveAbsStepped (DAC = 29916, sync = True, waitForSettling = False)
17-03-17 17:39:03.598 -07 000000486 INF: Z Motor: Moving to -0.136947 mm, started at -0.130172 mm, distance = -6.78 um
17-03-17 17:39:03.608 -07 000000486 INF: FPGA: Xmit ZDACW 29916\n [Z Motor]
17-03-17 17:39:03.618 -07 000000631 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:03.788 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 1135181128, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 17:39:03.788 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 17:39:03.788 -07 000000448 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:03.788 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 17:39:03.788 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 17:39:03.788 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:03.788 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:39:03.798 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:39:03.798 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 17:39:03.798 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 17:39:03.808 -07 000000458 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:03.808 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 17:39:03.808 -07 000000458 INF: FPGA: Recv YRDPOS 136273
17-03-17 17:39:03.808 -07 000000631 INF: FPGA: 'YRDPOS' command took 0 ms to send, 181 ms to get response, and 202 ms overall
17-03-17 17:39:03.808 -07 000000631 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:03.808 -07 000000631 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:39:03.808 -07 000000631 INF: Y Motor: Moving 1349 steps-27
17-03-17 17:39:03.808 -07 000000475 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 200 ms to get response, and 205 ms overall
17-03-17 17:39:03.808 -07 000000631 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:39:03.808 -07 000000486 INF: FPGA: 'ZDACW 29916' command took 0 ms to send, 190 ms to get response, and 202 ms overall
17-03-17 17:39:03.818 -07 000000475 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:39:03.828 -07 000000486 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:03.828 -07 000000458 INF: FPGA: Recv ZDACR 29916
17-03-17 17:39:03.838 -07 000000486 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-17 17:39:03.838 -07 000000486 INF: Z Motor: MoveAbsStepped took 231 ms (did NOT wait for settling yet))
17-03-17 17:39:04.018 -07 000000448 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:39:04.018 -07 000000475 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 210 ms overall
17-03-17 17:39:04.188 -07 000000475 INF: FPGA: Recv YMVTILE
17-03-17 17:39:04.188 -07 000000631 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 378 ms overall
17-03-17 17:39:04.218 -07 000000631 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:04.228 -07 000000475 INF: FPGA: Recv YRDPOS 137979
17-03-17 17:39:04.228 -07 000000631 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 17:39:04.228 -07 000000631 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:04.228 -07 000000631 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-17 17:39:04.228 -07 000000631 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.843 mm, average velocity = 2.230 mm/sec
17-03-17 17:39:05.178 -07 000000631 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:05.178 -07 000000475 INF: FPGA: Recv YRDPOS 137979
17-03-17 17:39:05.188 -07 000000631 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:05.188 -07 000000631 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:05.198 -07 000000631 INF: Y Motor: After move to 67.382607, error = -0.010048, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:39:05.198 -07 000000631 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:39:05.198 -07 000000631 INF: Y Motor: Moved to 67.3726 after 1601 ms (table move)
17-03-17 17:39:05.208 -07 000000442 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136947 mm (DAC = 29916)
17-03-17 17:39:05.208 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:05.208 -07 000000448 INF: FPGA: Recv ZSGSRD 30603
17-03-17 17:39:05.218 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:05.218 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:05.218 -07 000000475 INF: FPGA: Recv ZSGSRD 30609
17-03-17 17:39:05.228 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:05.228 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:05.228 -07 000000458 INF: FPGA: Recv ZSGSRD 30609
17-03-17 17:39:05.238 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:05.238 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:05.238 -07 000000458 INF: FPGA: Recv ZSGSRD 30615
17-03-17 17:39:05.248 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:05.248 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:05.248 -07 000000458 INF: FPGA: Recv ZSGSRD 30610
17-03-17 17:39:05.258 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:05.258 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:05.258 -07 000000486 INF: FPGA: Recv ZSGSRD 30610
17-03-17 17:39:05.268 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:05.268 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:05.268 -07 000000448 INF: FPGA: Recv ZSGSRD 30609
17-03-17 17:39:05.278 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:05.278 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:05.278 -07 000000458 INF: FPGA: Recv ZSGSRD 30605
17-03-17 17:39:05.288 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:05.288 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:05.288 -07 000000448 INF: FPGA: Recv ZSGSRD 30609
17-03-17 17:39:05.298 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:05.298 -07 000000442 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:05.298 -07 000000486 INF: FPGA: Recv ZSGSRD 30604
17-03-17 17:39:05.308 -07 000000442 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:05.308 -07 000000442 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:05.308 -07 000000458 INF: FPGA: Recv ZPIEZORD 26497
17-03-17 17:39:05.318 -07 000000442 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:05.318 -07 000000442 INF: Z Motor: Piezo is near 36.6 V (nominally 0 to 100 V), expect near 45.6 V, since DAC is at 4.565 V. Piezo Error = -9.0 V.
17-03-17 17:39:05.318 -07 000000442 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.9 um, Read 10 ADC samples: Avg = 30608 (-136.2 uncal um), Error = 0.8 uncal um, Median = 30609 (-136.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30603 (-136.1 uncal um), Max = 30615 (-136.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:39:05.318 -07 000000442 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30608, posNoise = 7, negNoise = 5
17-03-17 17:39:05.318 -07 000000442 INF: Z Motor: After move to -0.136947, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:05.318 -07 000000442 INF: Z Motor: Settle wait time = 1603 ms, measure time = 109 ms (allowed 150 ms), total time = 1712 ms
17-03-17 17:39:05.318 -07 000000442 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-17 17:39:05.368 -07 000000442 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1764 ms
17-03-17 17:39:05.368 -07 000000442 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:39:05.368 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:05.368 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:05.368 -07 000000475 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:05.368 -07 000000631 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:05.368 -07 000000448 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:39:05.368 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:05.368 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:39:05.368 -07 000000448 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:39:05.378 -07 000000448 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 17:39:05.378 -07 000000448 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:39:05.378 -07 000000448 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-17 17:39:05.378 -07 000000448 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms.
17-03-17 17:39:05.388 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:39:05.438 -07 000000448 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:39:05.628 -07 000000458 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:39:05.628 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:39:05.638 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:39:05.638 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1170603392, 0x0, 559484976) start.
17-03-17 17:39:05.668 -07 000000475 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:39:05.668 -07 000000631 INF: FPGA: Recv CAMSNAP
17-03-17 17:39:05.668 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 286 ms overall
17-03-17 17:39:05.748 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1170603392, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 17:39:05.748 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:05.748 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:39:05.748 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 17:39:05.768 -07 000000486 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:05.768 -07 000000458 INF: Autofocus start
17-03-17 17:39:05.768 -07 000000458 INF: MeasureProfile start
17-03-17 17:39:05.768 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:05.778 -07 000000486 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:05.778 -07 000000486 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:39:05.778 -07 000000458 INF: MeasureProfile done
17-03-17 17:39:05.778 -07 000000458 INF: X=16  Z correction [um]=0.0530179
17-03-17 17:39:05.778 -07 000000458 INF: Autofocus finished
17-03-17 17:39:05.978 -07 000000482 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:39:05.978 -07 000000486 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:39:05.978 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37255859375, Z-position -0.136955637246154. ----------
17-03-17 17:39:05.988 -07 000000610 INF: Cycle	3	Tile	10	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:39:05.988 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28440, sync = True, waitForSettling = True)
17-03-17 17:39:05.988 -07 000000610 INF: Z Motor: Moving to -0.130190 mm, started at -0.136956 mm, distance = 6.77 um
17-03-17 17:39:05.988 -07 000000610 INF: FPGA: Xmit ZDACW 28440\n [Z Motor]
17-03-17 17:39:05.988 -07 000000631 INF: FPGA: Recv ZDACW
17-03-17 17:39:05.998 -07 000000610 INF: FPGA: 'ZDACW 28440' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:05.998 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:05.998 -07 000000475 INF: FPGA: Recv ZDACR 28440
17-03-17 17:39:06.008 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:06.008 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:39:06.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:06.158 -07 000000458 INF: FPGA: Recv ZSGSRD 29557
17-03-17 17:39:06.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:06.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:06.168 -07 000000541 INF: FPGA: Recv ZSGSRD 29558
17-03-17 17:39:06.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:06.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:06.178 -07 000000429 INF: FPGA: Recv ZSGSRD 29554
17-03-17 17:39:06.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:06.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:06.188 -07 000000618 INF: FPGA: Recv ZSGSRD 29559
17-03-17 17:39:06.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:06.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:06.198 -07 000000442 INF: FPGA: Recv ZSGSRD 29557
17-03-17 17:39:06.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:06.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:06.208 -07 000000486 INF: FPGA: Recv ZSGSRD 29553
17-03-17 17:39:06.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:06.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:06.218 -07 000000429 INF: FPGA: Recv ZSGSRD 29557
17-03-17 17:39:06.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:06.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:06.228 -07 000000431 INF: FPGA: Recv ZSGSRD 29558
17-03-17 17:39:06.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:06.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:06.238 -07 000000448 INF: FPGA: Recv ZSGSRD 29559
17-03-17 17:39:06.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:06.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:06.248 -07 000000486 INF: FPGA: Recv ZSGSRD 29555
17-03-17 17:39:06.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:06.258 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:06.258 -07 000000458 INF: FPGA: Recv ZPIEZORD 25099
17-03-17 17:39:06.268 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:06.268 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.340 V. Piezo Error = -9.8 V.
17-03-17 17:39:06.268 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.2 um, Read 10 ADC samples: Avg = 29557 (-129.4 uncal um), Error = 0.8 uncal um, Median = 29557 (-129.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 29553 (-129.4 uncal um), Max = 29559 (-129.4 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 17:39:06.268 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29557, posNoise = 2, negNoise = 4
17-03-17 17:39:06.268 -07 000000610 INF: Z Motor: After move to -0.130190, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:06.268 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 17:39:06.268 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:06.268 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:06.268 -07 000000486 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:06.268 -07 000000442 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:06.268 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:39:06.268 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:39:06.268 -07 000000631 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:39:06.268 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:06.268 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:39:06.268 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:39:06.268 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:06.268 -07 000000631 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:39:06.278 -07 000000631 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:39:06.278 -07 000000631 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:39:06.278 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 17:39:06.278 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:39:06.278 -07 000000631 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:39:06.288 -07 000000631 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 17:39:06.288 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 17:39:06.288 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 17:39:06.288 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28617 150\n [Camera]
17-03-17 17:39:06.488 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:39:06.518 -07 000000475 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:39:06.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:39:06.878 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:39:06.878 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:39:06.878 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:06.878 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:06.878 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 17:39:06.878 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:39:06.878 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:39:06.878 -07 000000442 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:06.878 -07 000000442 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:06.878 -07 000000442 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 17:39:07.068 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28617 775
17-03-17 17:39:07.218 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:39:07.258 -07 000000442 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 17:39:07.258 -07 000000442 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 17:39:07.258 -07 000000442 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:07.258 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 17:39:07.258 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 17:39:07.258 -07 000000448 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:07.258 -07 000000442 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:39:07.258 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:07.258 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 17:39:07.268 -07 000000442 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 17:39:07.408 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:39:07.408 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:39:07.408 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:07.538 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:39:07.538 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:39:07.538 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:07.538 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:07.538 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 17:39:07.538 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:07.538 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) start.
17-03-17 17:39:07.598 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:39:07.598 -07 000000429 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:39:07.598 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28617 150' command took 2 ms to send, 1309 ms to get response, and 1315 ms overall
17-03-17 17:39:07.608 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:39:07.608 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.37255859375, Z-Position -0.130203790285164. ------
17-03-17 17:39:07.608 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:07.608 -07 000000458 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13659 mm
17-03-17 17:39:07.608 -07 000000458 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:39:07.608 -07 000000631 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-17 17:39:07.608 -07 000000631 INF: Y Motor: Moving to 68.2126 mm, started at 67.3726 mm, delta = 0.8400 mm
17-03-17 17:39:07.608 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 29839, sync = True, waitForSettling = False)
17-03-17 17:39:07.608 -07 000000626 INF: Z Motor: Moving to -0.136594 mm, started at -0.130204 mm, distance = -6.39 um
17-03-17 17:39:07.608 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:07.618 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:39:07.618 -07 000000631 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:07.618 -07 000000448 INF: FPGA: Recv YRDPOS 137979
17-03-17 17:39:07.628 -07 000000631 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 17:39:07.628 -07 000000631 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:07.628 -07 000000631 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:39:07.628 -07 000000631 INF: Y Motor: Moving 1344 steps-21
17-03-17 17:39:07.628 -07 000000482 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:39:07.638 -07 000000626 INF: FPGA: Xmit ZDACW 29839\n [Z Motor]
17-03-17 17:39:07.638 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 17:39:07.648 -07 000000626 INF: FPGA: 'ZDACW 29839' command took 0 ms to send, 0 ms to get response, and 31 ms overall
17-03-17 17:39:07.648 -07 000000631 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:39:07.658 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:07.658 -07 000000623 INF: FPGA: Recv ZDACR 29839
17-03-17 17:39:07.668 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:39:07.668 -07 000000626 INF: Z Motor: MoveAbsStepped took 51 ms (did NOT wait for settling yet))
17-03-17 17:39:07.828 -07 000000448 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:39:07.828 -07 000000482 INF: FPGA: 'FOCMRRFOC' command took 2 ms to send, 195 ms to get response, and 215 ms overall
17-03-17 17:39:07.918 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 17:39:07.918 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 17:39:07.918 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:07.918 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:07.918 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 17:39:07.918 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:39:07.918 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:07.928 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:07.928 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 514 ms.
17-03-17 17:39:07.928 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 17:39:08.018 -07 000000448 INF: FPGA: Recv YMVTILE
17-03-17 17:39:08.018 -07 000000631 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 17:39:08.048 -07 000000631 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:08.058 -07 000000424 INF: FPGA: Recv YRDPOS 139685
17-03-17 17:39:08.068 -07 000000631 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:08.068 -07 000000631 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:08.068 -07 000000631 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm)
17-03-17 17:39:08.068 -07 000000631 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.111 mm/sec
17-03-17 17:39:08.808 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.005817,
17-03-17 17:39:09.018 -07 000000631 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:09.018 -07 000000431 INF: FPGA: Recv YRDPOS 139685
17-03-17 17:39:09.028 -07 000000631 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.028 -07 000000631 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:09.038 -07 000000631 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:39:09.038 -07 000000631 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:39:09.038 -07 000000631 INF: Y Motor: Moved to 68.2056 after 1429 ms (table move)
17-03-17 17:39:09.048 -07 000000458 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136594 mm (DAC = 29839)
17-03-17 17:39:09.048 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:09.048 -07 000000424 INF: FPGA: Recv ZSGSRD 30549
17-03-17 17:39:09.058 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:09.058 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:09.058 -07 000000475 INF: FPGA: Recv ZSGSRD 30550
17-03-17 17:39:09.068 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.068 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:09.068 -07 000000482 INF: FPGA: Recv ZSGSRD 30557
17-03-17 17:39:09.078 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.078 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:09.078 -07 000000482 INF: FPGA: Recv ZSGSRD 30559
17-03-17 17:39:09.088 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.088 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:09.088 -07 000000431 INF: FPGA: Recv ZSGSRD 30553
17-03-17 17:39:09.098 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.098 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:09.098 -07 000000475 INF: FPGA: Recv ZSGSRD 30553
17-03-17 17:39:09.108 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.108 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:09.108 -07 000000431 INF: FPGA: Recv ZSGSRD 30558
17-03-17 17:39:09.118 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:09.118 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:09.118 -07 000000631 INF: FPGA: Recv ZSGSRD 30548
17-03-17 17:39:09.128 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.128 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:09.128 -07 000000631 INF: FPGA: Recv ZSGSRD 30551
17-03-17 17:39:09.138 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.138 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:09.138 -07 000000482 INF: FPGA: Recv ZSGSRD 30554
17-03-17 17:39:09.148 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.148 -07 000000458 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:09.148 -07 000000431 INF: FPGA: Recv ZPIEZORD 26427
17-03-17 17:39:09.158 -07 000000458 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.158 -07 000000458 INF: Z Motor: Piezo is near 36.5 V (nominally 0 to 100 V), expect near 45.5 V, since DAC is at 4.553 V. Piezo Error = -9.1 V.
17-03-17 17:39:09.158 -07 000000458 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.6 um, Read 10 ADC samples: Avg = 30553 (-135.8 uncal um), Error = 0.8 uncal um, Median = 30553 (-135.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30548 (-135.8 uncal um), Max = 30559 (-135.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:39:09.158 -07 000000458 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30553, posNoise = 6, negNoise = 5
17-03-17 17:39:09.158 -07 000000458 INF: Z Motor: After move to -0.136594, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:09.158 -07 000000458 INF: Z Motor: Settle wait time = 1433 ms, measure time = 109 ms (allowed 150 ms), total time = 1542 ms
17-03-17 17:39:09.158 -07 000000458 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-17 17:39:09.208 -07 000000458 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-17 17:39:09.208 -07 000000458 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:39:09.208 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:09.208 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:09.208 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:09.208 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:09.208 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:39:09.208 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:09.208 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:09.208 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:39:09.218 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 17:39:09.218 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:39:09.228 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 17:39:09.228 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-17 17:39:09.248 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:39:09.288 -07 000000424 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:39:09.488 -07 000000475 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:39:09.488 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:39:09.488 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:39:09.488 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) start.
17-03-17 17:39:09.528 -07 000000458 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:39:09.528 -07 000000631 INF: FPGA: Recv CAMSNAP
17-03-17 17:39:09.528 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 275 ms to get response, and 300 ms overall
17-03-17 17:39:09.608 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) end. Duration was 116 ms.
17-03-17 17:39:09.608 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:09.608 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:39:09.608 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-17 17:39:09.628 -07 000000458 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:09.628 -07 000000482 INF: Autofocus start
17-03-17 17:39:09.628 -07 000000482 INF: MeasureProfile start
17-03-17 17:39:09.628 -07 000000475 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:09.638 -07 000000458 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:09.638 -07 000000458 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:39:09.638 -07 000000482 INF: MeasureProfile done
17-03-17 17:39:09.638 -07 000000482 INF: X=16  Z correction [um]=0.0530179
17-03-17 17:39:09.638 -07 000000482 INF: Autofocus finished
17-03-17 17:39:09.838 -07 000000482 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:39:09.838 -07 000000458 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:39:09.838 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.136602305578358. ----------
17-03-17 17:39:09.838 -07 000000610 INF: Cycle	3	Tile	11	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:39:09.848 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28363, sync = True, waitForSettling = True)
17-03-17 17:39:09.848 -07 000000610 INF: Z Motor: Moving to -0.129837 mm, started at -0.136602 mm, distance = 6.76 um
17-03-17 17:39:09.848 -07 000000610 INF: FPGA: Xmit ZDACW 28363\n [Z Motor]
17-03-17 17:39:09.848 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 17:39:09.858 -07 000000610 INF: FPGA: 'ZDACW 28363' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.858 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:09.858 -07 000000475 INF: FPGA: Recv ZDACR 28363
17-03-17 17:39:09.868 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:09.868 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:39:10.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:10.018 -07 000000424 INF: FPGA: Recv ZSGSRD 29498
17-03-17 17:39:10.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:10.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:10.028 -07 000000482 INF: FPGA: Recv ZSGSRD 29497
17-03-17 17:39:10.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:10.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:10.038 -07 000000458 INF: FPGA: Recv ZSGSRD 29500
17-03-17 17:39:10.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:10.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:10.048 -07 000000482 INF: FPGA: Recv ZSGSRD 29503
17-03-17 17:39:10.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:10.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:10.058 -07 000000458 INF: FPGA: Recv ZSGSRD 29508
17-03-17 17:39:10.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:10.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:10.068 -07 000000482 INF: FPGA: Recv ZSGSRD 29501
17-03-17 17:39:10.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:10.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:10.078 -07 000000431 INF: FPGA: Recv ZSGSRD 29504
17-03-17 17:39:10.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:10.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:10.088 -07 000000631 INF: FPGA: Recv ZSGSRD 29508
17-03-17 17:39:10.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:10.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:10.098 -07 000000431 INF: FPGA: Recv ZSGSRD 29500
17-03-17 17:39:10.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:10.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:10.108 -07 000000631 INF: FPGA: Recv ZSGSRD 29495
17-03-17 17:39:10.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:10.118 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:10.118 -07 000000431 INF: FPGA: Recv ZPIEZORD 25047
17-03-17 17:39:10.128 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:10.128 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.328 V. Piezo Error = -9.8 V.
17-03-17 17:39:10.128 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.8 um, Read 10 ADC samples: Avg = 29501 (-129.1 uncal um), Error = 0.8 uncal um, Median = 29500 (-129.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29495 (-129.0 uncal um), Max = 29508 (-129.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 17:39:10.128 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29501, posNoise = 7, negNoise = 6
17-03-17 17:39:10.128 -07 000000610 INF: Z Motor: After move to -0.129837, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:10.128 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 17:39:10.128 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:10.128 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:10.128 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:10.128 -07 000000631 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:10.128 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:39:10.128 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:10.128 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:39:10.128 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:39:10.128 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:10.128 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:39:10.128 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:39:10.128 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:39:10.128 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:10.128 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:39:10.138 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:39:10.138 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:39:10.138 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:39:10.138 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-17 17:39:10.138 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 17:39:10.138 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:39:10.148 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28540 150\n [Camera]
17-03-17 17:39:10.348 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:39:10.738 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:39:10.738 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:39:10.738 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:10.738 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:39:10.738 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:39:10.738 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:10.748 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:10.748 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 17:39:10.748 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:10.748 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 17:39:10.928 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28540 775
17-03-17 17:39:11.078 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:39:11.118 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 374 ms.
17-03-17 17:39:11.118 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-17 17:39:11.118 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:11.118 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 17:39:11.118 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 17:39:11.118 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:11.128 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:11.128 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 17:39:11.128 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:11.138 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 17:39:11.268 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:39:11.268 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:39:11.268 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:11.388 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:39:11.388 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:39:11.398 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:11.398 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:11.398 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-17 17:39:11.398 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:11.398 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) start.
17-03-17 17:39:11.458 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:39:11.458 -07 000000631 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:39:11.458 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28540 150' command took 2 ms to send, 1305 ms to get response, and 1312 ms overall
17-03-17 17:39:11.458 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:39:11.458 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.20556640625, Z-Position -0.129844034405225. ------
17-03-17 17:39:11.468 -07 000000431 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:11.468 -07 000000409 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13632 mm
17-03-17 17:39:11.468 -07 000000409 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:39:11.468 -07 000000627 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-17 17:39:11.468 -07 000000627 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm
17-03-17 17:39:11.468 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:11.468 -07 000000631 INF: Z Motor: Entering MoveAbsStepped (DAC = 29779, sync = True, waitForSettling = False)
17-03-17 17:39:11.468 -07 000000631 INF: Z Motor: Moving to -0.136320 mm, started at -0.129844 mm, distance = -6.48 um
17-03-17 17:39:11.478 -07 000000431 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:11.478 -07 000000631 INF: FPGA: Xmit ZDACW 29779\n [Z Motor]
17-03-17 17:39:11.478 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 17:39:11.488 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:11.488 -07 000000631 INF: FPGA: 'ZDACW 29779' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 17:39:11.488 -07 000000424 INF: FPGA: Recv YRDPOS 139685
17-03-17 17:39:11.498 -07 000000431 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:39:11.498 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-17 17:39:11.498 -07 000000627 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:11.498 -07 000000627 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:39:11.498 -07 000000627 INF: Y Motor: Moving 1339 steps-14
17-03-17 17:39:11.508 -07 000000631 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:11.508 -07 000000424 INF: FPGA: Recv ZDACR 29779
17-03-17 17:39:11.518 -07 000000627 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:39:11.518 -07 000000631 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:39:11.518 -07 000000631 INF: Z Motor: MoveAbsStepped took 46 ms (did NOT wait for settling yet))
17-03-17 17:39:11.518 -07 000000482 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:39:11.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:39:11.698 -07 000000424 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:39:11.698 -07 000000431 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 17:39:11.778 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 17:39:11.778 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 17:39:11.778 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:11.778 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:11.778 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 17:39:11.778 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 17:39:11.778 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:11.778 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:11.788 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 515 ms.
17-03-17 17:39:11.788 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 17:39:11.888 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-17 17:39:11.898 -07 000000627 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 397 ms overall
17-03-17 17:39:11.928 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:11.928 -07 000000431 INF: FPGA: Recv YRDPOS 141369
17-03-17 17:39:11.938 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:11.938 -07 000000627 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:11.938 -07 000000627 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 17:39:11.938 -07 000000627 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.837 mm, average velocity = 2.098 mm/sec
17-03-17 17:39:12.888 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:12.888 -07 000000631 INF: FPGA: Recv YRDPOS 141369
17-03-17 17:39:12.898 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:12.898 -07 000000627 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:12.918 -07 000000627 INF: Y Motor: After move to 69.042610, error = -0.014778, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:39:12.918 -07 000000627 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:39:12.918 -07 000000627 INF: Y Motor: Moved to 69.0278 after 1447 ms (table move)
17-03-17 17:39:12.918 -07 000000409 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136320 mm (DAC = 29779)
17-03-17 17:39:12.918 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:12.918 -07 000000431 INF: FPGA: Recv ZSGSRD 30518
17-03-17 17:39:12.928 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:12.928 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:12.928 -07 000000433 INF: FPGA: Recv ZSGSRD 30508
17-03-17 17:39:12.938 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:12.938 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:12.938 -07 000000631 INF: FPGA: Recv ZSGSRD 30504
17-03-17 17:39:12.948 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:12.948 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:12.948 -07 000000482 INF: FPGA: Recv ZSGSRD 30511
17-03-17 17:39:12.958 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:12.958 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:12.958 -07 000000631 INF: FPGA: Recv ZSGSRD 30513
17-03-17 17:39:12.968 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:12.968 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:12.968 -07 000000482 INF: FPGA: Recv ZSGSRD 30515
17-03-17 17:39:12.978 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:12.978 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:12.978 -07 000000501 INF: FPGA: Recv ZSGSRD 30511
17-03-17 17:39:12.988 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:12.988 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:12.988 -07 000000482 INF: FPGA: Recv ZSGSRD 30505
17-03-17 17:39:12.998 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:12.998 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:12.998 -07 000000501 INF: FPGA: Recv ZSGSRD 30512
17-03-17 17:39:13.008 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.008 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:13.008 -07 000000482 INF: FPGA: Recv ZSGSRD 30509
17-03-17 17:39:13.018 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.018 -07 000000409 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:13.018 -07 000000631 INF: FPGA: Recv ZPIEZORD 26378
17-03-17 17:39:13.028 -07 000000409 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.028 -07 000000409 INF: Z Motor: Piezo is near 36.4 V (nominally 0 to 100 V), expect near 45.4 V, since DAC is at 4.544 V. Piezo Error = -9.1 V.
17-03-17 17:39:13.028 -07 000000409 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.3 um, Read 10 ADC samples: Avg = 30511 (-135.5 uncal um), Error = 0.8 uncal um, Median = 30511 (-135.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30504 (-135.5 uncal um), Max = 30518 (-135.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 17:39:13.028 -07 000000409 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30511, posNoise = 7, negNoise = 7
17-03-17 17:39:13.028 -07 000000409 INF: Z Motor: After move to -0.136320, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:13.028 -07 000000409 INF: Z Motor: Settle wait time = 1449 ms, measure time = 107 ms (allowed 150 ms), total time = 1556 ms
17-03-17 17:39:13.028 -07 000000409 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 17:39:13.078 -07 000000409 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1609 ms
17-03-17 17:39:13.078 -07 000000409 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:39:13.078 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:13.078 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:13.078 -07 000000448 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:13.078 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:13.078 -07 000000627 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:39:13.078 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:13.078 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:13.078 -07 000000627 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:39:13.088 -07 000000627 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:13.088 -07 000000627 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:39:13.098 -07 000000627 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms.
17-03-17 17:39:13.098 -07 000000627 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-17 17:39:13.098 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:39:13.138 -07 000000409 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:39:13.338 -07 000000431 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:39:13.338 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:39:13.338 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:39:13.338 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) start.
17-03-17 17:39:13.378 -07 000000448 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:39:13.378 -07 000000482 INF: FPGA: Recv CAMSNAP
17-03-17 17:39:13.378 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 284 ms overall
17-03-17 17:39:13.458 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) end. Duration was 116 ms.
17-03-17 17:39:13.458 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:13.458 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:39:13.458 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-17 17:39:13.478 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:13.478 -07 000000608 INF: Autofocus start
17-03-17 17:39:13.478 -07 000000608 INF: MeasureProfile start
17-03-17 17:39:13.478 -07 000000409 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:13.488 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:39:13.488 -07 000000547 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:39:13.488 -07 000000608 INF: MeasureProfile done
17-03-17 17:39:13.488 -07 000000608 INF: X=48  Z correction [um]=0.2069503
17-03-17 17:39:13.488 -07 000000608 INF: Autofocus finished
17-03-17 17:39:13.688 -07 000000458 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:39:13.688 -07 000000547 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:39:13.688 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02783203125, Z-position -0.136332488668404. ----------
17-03-17 17:39:13.698 -07 000000610 INF: Cycle	3	Tile	12	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:39:13.698 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28337, sync = True, waitForSettling = True)
17-03-17 17:39:13.698 -07 000000610 INF: Z Motor: Moving to -0.129718 mm, started at -0.136332 mm, distance = 6.61 um
17-03-17 17:39:13.698 -07 000000610 INF: FPGA: Xmit ZDACW 28337\n [Z Motor]
17-03-17 17:39:13.698 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 17:39:13.708 -07 000000610 INF: FPGA: 'ZDACW 28337' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:13.708 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:13.708 -07 000000501 INF: FPGA: Recv ZDACR 28337
17-03-17 17:39:13.718 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.718 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:39:13.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:13.868 -07 000000547 INF: FPGA: Recv ZSGSRD 29479
17-03-17 17:39:13.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:13.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:13.878 -07 000000627 INF: FPGA: Recv ZSGSRD 29480
17-03-17 17:39:13.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:13.888 -07 000000448 INF: FPGA: Recv ZSGSRD 29484
17-03-17 17:39:13.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:13.898 -07 000000547 INF: FPGA: Recv ZSGSRD 29480
17-03-17 17:39:13.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:13.908 -07 000000475 INF: FPGA: Recv ZSGSRD 29483
17-03-17 17:39:13.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:13.918 -07 000000547 INF: FPGA: Recv ZSGSRD 29485
17-03-17 17:39:13.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:13.928 -07 000000627 INF: FPGA: Recv ZSGSRD 29484
17-03-17 17:39:13.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:13.938 -07 000000475 INF: FPGA: Recv ZSGSRD 29481
17-03-17 17:39:13.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:13.948 -07 000000448 INF: FPGA: Recv ZSGSRD 29479
17-03-17 17:39:13.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:13.958 -07 000000475 INF: FPGA: Recv ZSGSRD 29484
17-03-17 17:39:13.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.968 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:13.968 -07 000000627 INF: FPGA: Recv ZPIEZORD 25031
17-03-17 17:39:13.978 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:13.978 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.324 V. Piezo Error = -9.8 V.
17-03-17 17:39:13.978 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.7 um, Read 10 ADC samples: Avg = 29482 (-128.9 uncal um), Error = 0.8 uncal um, Median = 29482 (-128.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 29479 (-128.9 uncal um), Max = 29485 (-129.0 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 17:39:13.978 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29482, posNoise = 3, negNoise = 3
17-03-17 17:39:13.978 -07 000000610 INF: Z Motor: After move to -0.129718, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:13.978 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 17:39:13.978 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:13.978 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:13.978 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:13.978 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:13.978 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:39:13.978 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:13.978 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:39:13.978 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:39:13.978 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:39:13.978 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:39:13.978 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:39:13.978 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:39:13.988 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:13.988 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:39:13.988 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:39:13.988 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:39:13.998 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 17:39:13.998 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 17:39:13.998 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 17:39:13.998 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 17:39:13.998 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28513 150\n [Camera]
17-03-17 17:39:14.168 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 3.994908,
17-03-17 17:39:14.208 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:39:14.598 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:39:14.598 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:39:14.598 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:14.598 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:14.598 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) start.
17-03-17 17:39:14.598 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:39:14.598 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:39:14.598 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:14.598 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:14.598 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:39:14.788 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28513 775
17-03-17 17:39:15.038 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1135181128, 0x0, 391868352) end. Duration was 441 ms.
17-03-17 17:39:15.038 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:39:15.038 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 441 ms.
17-03-17 17:39:15.038 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:15.038 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 438 ms.
17-03-17 17:39:15.038 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 440 ms.
17-03-17 17:39:15.038 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:15.048 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:39:15.048 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 447 ms.
17-03-17 17:39:15.048 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 17:39:15.058 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 454 ms.
17-03-17 17:39:15.118 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:39:15.118 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:39:15.128 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:15.128 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:39:15.128 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:39:15.128 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:15.128 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:15.128 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-17 17:39:15.128 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:15.138 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) start.
17-03-17 17:39:15.318 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:39:15.318 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:39:15.318 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28513 150' command took 2 ms to send, 1301 ms to get response, and 1312 ms overall
17-03-17 17:39:15.318 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:39:15.318 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 13 at Y-position 69.02783203125, Z-Position -0.129721974374532. ------
17-03-17 17:39:15.318 -07 000000448 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:15.318 -07 000000482 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13604 mm
17-03-17 17:39:15.318 -07 000000482 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:39:15.328 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:15.328 -07 000000448 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:39:15.328 -07 000000448 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:39:15.328 -07 000000486 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-17 17:39:15.328 -07 000000486 INF: Y Motor: Moving to 69.8726 mm, started at 69.0278 mm, delta = 0.8448 mm
17-03-17 17:39:15.328 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 29719, sync = True, waitForSettling = False)
17-03-17 17:39:15.328 -07 000000626 INF: Z Motor: Moving to -0.136045 mm, started at -0.129722 mm, distance = -6.32 um
17-03-17 17:39:15.338 -07 000000626 INF: FPGA: Xmit ZDACW 29719\n [Z Motor]
17-03-17 17:39:15.338 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 17:39:15.348 -07 000000626 INF: FPGA: 'ZDACW 29719' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 17:39:15.348 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:15.348 -07 000000618 INF: FPGA: Recv YRDPOS 141369
17-03-17 17:39:15.358 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-17 17:39:15.358 -07 000000486 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:15.358 -07 000000486 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:39:15.358 -07 000000486 INF: Y Motor: Moving 1352 steps-30
17-03-17 17:39:15.358 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:15.358 -07 000000541 INF: FPGA: Recv ZDACR 29719
17-03-17 17:39:15.368 -07 000000626 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:39:15.368 -07 000000626 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-17 17:39:15.368 -07 000000486 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:39:15.508 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 17:39:15.508 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 17:39:15.508 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:15.508 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 17:39:15.508 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:39:15.508 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:15.508 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:15.518 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:15.518 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 17:39:15.518 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 17:39:15.528 -07 000000623 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:39:15.528 -07 000000448 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-17 17:39:15.738 -07 000000547 INF: FPGA: Recv YMVTILE
17-03-17 17:39:15.738 -07 000000486 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-17 17:39:15.778 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:15.778 -07 000000541 INF: FPGA: Recv YRDPOS 143081
17-03-17 17:39:15.788 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:15.788 -07 000000486 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:15.788 -07 000000486 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-17 17:39:15.788 -07 000000486 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.845 mm, average velocity = 2.177 mm/sec
17-03-17 17:39:16.518 -07 000000442 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:39:16.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:39:16.738 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:16.738 -07 000000442 INF: FPGA: Recv YRDPOS 143081
17-03-17 17:39:16.748 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:16.748 -07 000000486 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:16.758 -07 000000486 INF: Y Motor: After move to 69.872612, error = -0.008842, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:39:16.758 -07 000000486 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:39:16.758 -07 000000486 INF: Y Motor: Moved to 69.8638 after 1437 ms (table move)
17-03-17 17:39:16.768 -07 000000482 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136045 mm (DAC = 29719)
17-03-17 17:39:16.768 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:16.768 -07 000000475 INF: FPGA: Recv ZSGSRD 30471
17-03-17 17:39:16.778 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:16.778 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:16.778 -07 000000448 INF: FPGA: Recv ZSGSRD 30457
17-03-17 17:39:16.788 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:16.788 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:16.788 -07 000000475 INF: FPGA: Recv ZSGSRD 30467
17-03-17 17:39:16.798 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:16.798 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:16.798 -07 000000501 INF: FPGA: Recv ZSGSRD 30476
17-03-17 17:39:16.808 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:16.808 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:16.808 -07 000000486 INF: FPGA: Recv ZSGSRD 30470
17-03-17 17:39:16.818 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:16.818 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:16.818 -07 000000501 INF: FPGA: Recv ZSGSRD 30468
17-03-17 17:39:16.828 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:16.828 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:16.828 -07 000000627 INF: FPGA: Recv ZSGSRD 30465
17-03-17 17:39:16.838 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:16.838 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:16.838 -07 000000547 INF: FPGA: Recv ZSGSRD 30464
17-03-17 17:39:16.848 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:16.848 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:16.848 -07 000000627 INF: FPGA: Recv ZSGSRD 30464
17-03-17 17:39:16.858 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:16.858 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:16.858 -07 000000608 INF: FPGA: Recv ZSGSRD 30462
17-03-17 17:39:16.868 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:16.868 -07 000000482 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:16.868 -07 000000627 INF: FPGA: Recv ZPIEZORD 26326
17-03-17 17:39:16.878 -07 000000482 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:16.878 -07 000000482 INF: Z Motor: Piezo is near 36.2 V (nominally 0 to 100 V), expect near 45.3 V, since DAC is at 4.535 V. Piezo Error = -9.1 V.
17-03-17 17:39:16.878 -07 000000482 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.0 um, Read 10 ADC samples: Avg = 30466 (-135.3 uncal um), Error = 0.8 uncal um, Median = 30466 (-135.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 30457 (-135.2 uncal um), Max = 30476 (-135.3 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 17:39:16.878 -07 000000482 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30466, posNoise = 10, negNoise = 9
17-03-17 17:39:16.878 -07 000000482 INF: Z Motor: After move to -0.136045, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:16.878 -07 000000482 INF: Z Motor: Settle wait time = 1439 ms, measure time = 108 ms (allowed 150 ms), total time = 1547 ms
17-03-17 17:39:16.878 -07 000000482 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-17 17:39:16.928 -07 000000482 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-17 17:39:16.928 -07 000000482 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:39:16.928 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:16.928 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:16.928 -07 000000623 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:16.928 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:16.928 -07 000000541 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:39:16.928 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:16.928 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 17:39:16.928 -07 000000541 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:39:16.938 -07 000000541 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:16.938 -07 000000541 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:39:16.948 -07 000000541 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 17:39:16.948 -07 000000541 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-17 17:39:16.948 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:39:16.998 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 43
17-03-17 17:39:17.198 -07 000000482 INF: FPGA: Recv @CAMSNAP img rdy 243
17-03-17 17:39:17.198 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 243
17-03-17 17:39:17.198 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:39:17.198 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) start.
17-03-17 17:39:17.228 -07 000000608 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:39:17.228 -07 000000618 INF: FPGA: Recv CAMSNAP
17-03-17 17:39:17.228 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 285 ms overall
17-03-17 17:39:17.308 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1103629984, 0x0, 559484976) end. Duration was 114 ms.
17-03-17 17:39:17.308 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:17.318 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:39:17.318 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 17:39:17.328 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:17.328 -07 000000623 INF: Autofocus start
17-03-17 17:39:17.328 -07 000000623 INF: MeasureProfile start
17-03-17 17:39:17.328 -07 000000608 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:17.338 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 17:39:17.338 -07 000000482 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:39:17.338 -07 000000623 INF: MeasureProfile done
17-03-17 17:39:17.338 -07 000000623 INF: X=0  Z correction [um]=-0.02394831
17-03-17 17:39:17.338 -07 000000623 INF: Autofocus finished
17-03-17 17:39:17.538 -07 000000541 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:39:17.538 -07 000000482 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:39:17.538 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86376953125, Z-position -0.136043399122024. ----------
17-03-17 17:39:17.538 -07 000000610 INF: Cycle	3	Tile	13	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:39:17.548 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28226, sync = True, waitForSettling = True)
17-03-17 17:39:17.548 -07 000000610 INF: Z Motor: Moving to -0.129210 mm, started at -0.136043 mm, distance = 6.83 um
17-03-17 17:39:17.548 -07 000000610 INF: FPGA: Xmit ZDACW 28226\n [Z Motor]
17-03-17 17:39:17.548 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 17:39:17.558 -07 000000610 INF: FPGA: 'ZDACW 28226' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:17.558 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:17.558 -07 000000627 INF: FPGA: Recv ZDACR 28226
17-03-17 17:39:17.568 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:17.568 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:39:17.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:17.718 -07 000000547 INF: FPGA: Recv ZSGSRD 29406
17-03-17 17:39:17.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:17.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:17.728 -07 000000608 INF: FPGA: Recv ZSGSRD 29405
17-03-17 17:39:17.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:17.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:17.738 -07 000000429 INF: FPGA: Recv ZSGSRD 29403
17-03-17 17:39:17.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:17.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:17.748 -07 000000627 INF: FPGA: Recv ZSGSRD 29406
17-03-17 17:39:17.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:17.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:17.758 -07 000000442 INF: FPGA: Recv ZSGSRD 29406
17-03-17 17:39:17.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:17.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:17.768 -07 000000623 INF: FPGA: Recv ZSGSRD 29399
17-03-17 17:39:17.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:17.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:17.778 -07 000000482 INF: FPGA: Recv ZSGSRD 29400
17-03-17 17:39:17.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:17.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:17.788 -07 000000627 INF: FPGA: Recv ZSGSRD 29403
17-03-17 17:39:17.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:17.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:17.798 -07 000000442 INF: FPGA: Recv ZSGSRD 29406
17-03-17 17:39:17.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:17.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:17.808 -07 000000608 INF: FPGA: Recv ZSGSRD 29408
17-03-17 17:39:17.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:17.818 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:17.818 -07 000000429 INF: FPGA: Recv ZPIEZORD 24957
17-03-17 17:39:17.828 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:17.828 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.307 V. Piezo Error = -9.8 V.
17-03-17 17:39:17.828 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.2 um, Read 10 ADC samples: Avg = 29404 (-128.4 uncal um), Error = 0.8 uncal um, Median = 29406 (-128.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29399 (-128.4 uncal um), Max = 29408 (-128.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 17:39:17.828 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29404, posNoise = 4, negNoise = 5
17-03-17 17:39:17.828 -07 000000610 INF: Z Motor: After move to -0.129210, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:17.828 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 17:39:17.828 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:17.828 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:17.828 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:17.828 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:17.828 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:39:17.828 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:17.828 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:39:17.828 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:39:17.828 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:17.828 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:39:17.828 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:39:17.828 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:39:17.838 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:39:17.838 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:39:17.838 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:39:17.838 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:39:17.838 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:39:17.838 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:39:17.848 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:39:17.848 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:39:17.848 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28403 150\n [Camera]
17-03-17 17:39:18.048 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:39:18.438 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:39:18.438 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:39:18.438 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:18.438 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:18.438 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 17:39:18.438 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:39:18.438 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:39:18.438 -07 000000442 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:18.438 -07 000000442 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:18.438 -07 000000442 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 17:39:18.628 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28403 775
17-03-17 17:39:18.778 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:39:18.818 -07 000000442 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 17:39:18.818 -07 000000442 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 17:39:18.818 -07 000000442 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:18.818 -07 000000442 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:18.818 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 17:39:18.818 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 17:39:18.818 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:18.828 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:18.828 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 17:39:18.828 -07 000000442 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 17:39:18.968 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:39:18.968 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:39:18.968 -07 000000442 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:18.968 -07 000000442 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:18.968 -07 000000442 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 17:39:18.968 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:39:18.968 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:39:18.968 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:18.968 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:18.968 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 17:39:19.158 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:39:19.158 -07 000000429 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:39:19.158 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28403 150' command took 2 ms to send, 1307 ms to get response, and 1312 ms overall
17-03-17 17:39:19.158 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:39:19.158 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 14 at Y-position 69.86376953125, Z-Position -0.129220885827474. ------
17-03-17 17:39:19.168 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:19.168 -07 000000623 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.13569 mm
17-03-17 17:39:19.168 -07 000000623 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:39:19.168 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-17 17:39:19.168 -07 000000429 INF: Y Motor: Moving to 70.7026 mm, started at 69.8638 mm, delta = 0.8388 mm
17-03-17 17:39:19.178 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:19.348 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 17:39:19.348 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 17:39:19.348 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:19.348 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:19.358 -07 000000442 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 17:39:19.358 -07 000000442 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 17:39:19.358 -07 000000442 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:19.358 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 17:39:19.368 -07 000000442 INF: Camera: CopyActivePixFullImage end. Duration was 9 ms.
17-03-17 17:39:19.368 -07 000000442 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 17:39:19.398 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 29642, sync = True, waitForSettling = False)
17-03-17 17:39:19.398 -07 000000547 INF: Z Motor: Moving to -0.135692 mm, started at -0.129221 mm, distance = -6.47 um
17-03-17 17:39:19.398 -07 000000547 INF: FPGA: Xmit ZDACW 29642\n [Z Motor]
17-03-17 17:39:19.398 -07 000000442 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:19.398 -07 000000442 INF: FPGA: Recv YRDPOS 143082
17-03-17 17:39:19.398 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 224 ms to get response, and 230 ms overall
17-03-17 17:39:19.398 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 214 ms to get response, and 228 ms overall
17-03-17 17:39:19.398 -07 000000442 INF: FPGA: Recv ZDACW
17-03-17 17:39:19.398 -07 000000429 INF: Y Motor: Encoder = 143082 = motor step 111782.8 = 69.8643 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:19.398 -07 000000429 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:39:19.398 -07 000000429 INF: Y Motor: Moving 1341 steps-18
17-03-17 17:39:19.408 -07 000000547 INF: FPGA: 'ZDACW 29642' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:19.408 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:39:19.418 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:39:19.428 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:19.428 -07 000000442 INF: FPGA: Recv ZDACR 29642
17-03-17 17:39:19.438 -07 000000547 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:39:19.438 -07 000000547 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-17 17:39:19.618 -07 000000547 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:39:19.618 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 217 ms overall
17-03-17 17:39:19.708 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.000345,
17-03-17 17:39:19.778 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-17 17:39:19.778 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-17 17:39:19.818 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:19.818 -07 000000547 INF: FPGA: Recv YRDPOS 144771
17-03-17 17:39:19.828 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:19.828 -07 000000429 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:19.828 -07 000000429 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 17:39:19.828 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.839 mm, average velocity = 2.219 mm/sec
17-03-17 17:39:20.778 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:20.778 -07 000000501 INF: FPGA: Recv YRDPOS 144771
17-03-17 17:39:20.788 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:20.788 -07 000000429 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:20.798 -07 000000429 INF: Y Motor: After move to 70.702606, error = -0.013641, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:39:20.798 -07 000000429 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:39:20.798 -07 000000429 INF: Y Motor: Moved to 70.6890 after 1633 ms (table move)
17-03-17 17:39:20.808 -07 000000623 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135692 mm (DAC = 29642)
17-03-17 17:39:20.808 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:20.808 -07 000000424 INF: FPGA: Recv ZSGSRD 30419
17-03-17 17:39:20.818 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:39:20.818 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:20.818 -07 000000429 INF: FPGA: Recv ZSGSRD 30409
17-03-17 17:39:20.828 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:20.828 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:20.828 -07 000000424 INF: FPGA: Recv ZSGSRD 30408
17-03-17 17:39:20.838 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:20.838 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:20.838 -07 000000429 INF: FPGA: Recv ZSGSRD 30414
17-03-17 17:39:20.848 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:20.848 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:20.848 -07 000000442 INF: FPGA: Recv ZSGSRD 30415
17-03-17 17:39:20.858 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:20.858 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:20.858 -07 000000429 INF: FPGA: Recv ZSGSRD 30411
17-03-17 17:39:20.868 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:20.868 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:20.868 -07 000000547 INF: FPGA: Recv ZSGSRD 30409
17-03-17 17:39:20.878 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:20.878 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:20.878 -07 000000458 INF: FPGA: Recv ZSGSRD 30414
17-03-17 17:39:20.888 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:20.888 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:20.888 -07 000000547 INF: FPGA: Recv ZSGSRD 30410
17-03-17 17:39:20.898 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:20.898 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:20.898 -07 000000458 INF: FPGA: Recv ZSGSRD 30411
17-03-17 17:39:20.908 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:20.908 -07 000000623 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:20.908 -07 000000429 INF: FPGA: Recv ZPIEZORD 26285
17-03-17 17:39:20.918 -07 000000623 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:20.918 -07 000000623 INF: Z Motor: Piezo is near 36.2 V (nominally 0 to 100 V), expect near 45.2 V, since DAC is at 4.523 V. Piezo Error = -9.1 V.
17-03-17 17:39:20.918 -07 000000623 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.7 um, Read 10 ADC samples: Avg = 30412 (-134.9 uncal um), Error = 0.8 uncal um, Median = 30411 (-134.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30408 (-134.9 uncal um), Max = 30419 (-134.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 17:39:20.918 -07 000000623 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30412, posNoise = 7, negNoise = 4
17-03-17 17:39:20.918 -07 000000623 INF: Z Motor: After move to -0.135692, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:20.918 -07 000000623 INF: Z Motor: Settle wait time = 1412 ms, measure time = 107 ms (allowed 150 ms), total time = 1519 ms
17-03-17 17:39:20.918 -07 000000623 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 17:39:20.968 -07 000000623 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1796 ms
17-03-17 17:39:20.968 -07 000000623 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:39:20.968 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:20.968 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:20.968 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:20.968 -07 000000442 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:20.978 -07 000000429 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:39:20.978 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:20.978 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:39:20.978 -07 000000429 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:39:20.978 -07 000000429 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:20.978 -07 000000429 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:39:20.988 -07 000000429 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-17 17:39:20.988 -07 000000429 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-17 17:39:20.988 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:39:21.028 -07 000000442 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:39:21.228 -07 000000547 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:39:21.228 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:39:21.228 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:39:21.238 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 682359904, 0x0, 559484976) start.
17-03-17 17:39:21.268 -07 000000431 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:39:21.268 -07 000000424 INF: FPGA: Recv CAMSNAP
17-03-17 17:39:21.268 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 284 ms overall
17-03-17 17:39:21.348 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 682359904, 0x0, 559484976) end. Duration was 116 ms.
17-03-17 17:39:21.348 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:21.348 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:39:21.348 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-17 17:39:21.368 -07 000000458 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:21.368 -07 000000442 INF: Autofocus start
17-03-17 17:39:21.368 -07 000000442 INF: MeasureProfile start
17-03-17 17:39:21.378 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:21.378 -07 000000458 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 17:39:21.378 -07 000000458 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:39:21.388 -07 000000442 INF: MeasureProfile done
17-03-17 17:39:21.388 -07 000000442 INF: X=-16  Z correction [um]=-0.08128808
17-03-17 17:39:21.388 -07 000000442 INF: Autofocus finished
17-03-17 17:39:21.518 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:39:21.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:39:21.578 -07 000000442 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:39:21.578 -07 000000458 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-17 17:39:21.578 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68896484375, Z-position -0.135696491666369. ----------
17-03-17 17:39:21.588 -07 000000610 INF: Cycle	3	Tile	14	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:39:21.588 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28137, sync = True, waitForSettling = True)
17-03-17 17:39:21.588 -07 000000610 INF: Z Motor: Moving to -0.128803 mm, started at -0.135696 mm, distance = 6.89 um
17-03-17 17:39:21.588 -07 000000610 INF: FPGA: Xmit ZDACW 28137\n [Z Motor]
17-03-17 17:39:21.588 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 17:39:21.598 -07 000000610 INF: FPGA: 'ZDACW 28137' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:21.598 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:21.598 -07 000000442 INF: FPGA: Recv ZDACR 28137
17-03-17 17:39:21.608 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:21.608 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:39:21.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:21.758 -07 000000429 INF: FPGA: Recv ZSGSRD 29338
17-03-17 17:39:21.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:21.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:21.768 -07 000000442 INF: FPGA: Recv ZSGSRD 29340
17-03-17 17:39:21.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:21.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:21.778 -07 000000623 INF: FPGA: Recv ZSGSRD 29339
17-03-17 17:39:21.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:21.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:21.788 -07 000000442 INF: FPGA: Recv ZSGSRD 29334
17-03-17 17:39:21.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:21.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:21.798 -07 000000547 INF: FPGA: Recv ZSGSRD 29347
17-03-17 17:39:21.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:21.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:21.808 -07 000000623 INF: FPGA: Recv ZSGSRD 29340
17-03-17 17:39:21.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:21.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:21.818 -07 000000547 INF: FPGA: Recv ZSGSRD 29343
17-03-17 17:39:21.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:21.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:21.828 -07 000000442 INF: FPGA: Recv ZSGSRD 29341
17-03-17 17:39:21.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:21.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:21.838 -07 000000547 INF: FPGA: Recv ZSGSRD 29340
17-03-17 17:39:21.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:21.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:21.848 -07 000000501 INF: FPGA: Recv ZSGSRD 29341
17-03-17 17:39:21.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:21.858 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:21.858 -07 000000547 INF: FPGA: Recv ZPIEZORD 24887
17-03-17 17:39:21.868 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:21.868 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.293 V. Piezo Error = -9.8 V.
17-03-17 17:39:21.868 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29340 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29340 (-128.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29334 (-128.0 uncal um), Max = 29347 (-128.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 17:39:21.868 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29340, posNoise = 7, negNoise = 6
17-03-17 17:39:21.868 -07 000000610 INF: Z Motor: After move to -0.128803, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:21.868 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 17:39:21.868 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:21.868 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:21.868 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:21.868 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:39:21.868 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:39:21.868 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:39:21.868 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:21.868 -07 000000442 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:21.868 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 17:39:21.868 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:39:21.868 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:39:21.868 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:39:21.868 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:39:21.868 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:39:21.878 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:39:21.878 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:39:21.888 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 17:39:21.888 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:39:21.888 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 17:39:21.888 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:39:21.888 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28313 150\n [Camera]
17-03-17 17:39:22.088 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:39:22.478 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:39:22.478 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:39:22.478 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:22.478 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:22.478 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 17:39:22.478 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:39:22.478 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:39:22.478 -07 000000631 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:22.478 -07 000000631 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:22.478 -07 000000631 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 17:39:22.668 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28313 775
17-03-17 17:39:22.818 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:39:22.858 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 17:39:22.858 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:39:22.858 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:22.858 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:22.858 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:39:22.858 -07 000000631 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 17:39:22.858 -07 000000631 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 17:39:22.858 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:22.858 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:22.868 -07 000000631 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 17:39:23.008 -07 000000442 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1116
17-03-17 17:39:23.008 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1116
17-03-17 17:39:23.008 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:23.008 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:23.008 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 17:39:23.008 -07 000000442 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1116
17-03-17 17:39:23.008 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1116
17-03-17 17:39:23.018 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:23.018 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:23.018 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 17:39:23.198 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:39:23.198 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:39:23.198 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28313 150' command took 2 ms to send, 1305 ms to get response, and 1312 ms overall
17-03-17 17:39:23.198 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:39:23.198 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.68896484375, Z-Position -0.128809736250401. ------
17-03-17 17:39:23.208 -07 000000431 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:23.208 -07 000000631 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.13552 mm
17-03-17 17:39:23.208 -07 000000631 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:39:23.208 -07 000000623 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:23.208 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-17 17:39:23.208 -07 000000547 INF: Y Motor: Moving to 71.5326 mm, started at 70.6890 mm, delta = 0.8436 mm
17-03-17 17:39:23.208 -07 000000448 INF: Z Motor: Entering MoveAbsStepped (DAC = 29604, sync = True, waitForSettling = False)
17-03-17 17:39:23.208 -07 000000448 INF: Z Motor: Moving to -0.135518 mm, started at -0.128810 mm, distance = -6.71 um
17-03-17 17:39:23.218 -07 000000431 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:23.218 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:23.218 -07 000000433 INF: FPGA: Recv YRDPOS 144772
17-03-17 17:39:23.228 -07 000000448 INF: FPGA: Xmit ZDACW 29604\n [Z Motor]
17-03-17 17:39:23.228 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 17:39:23.228 -07 000000547 INF: Y Motor: Encoder = 144772 = motor step 113103.1 = 70.6895 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:23.228 -07 000000623 INF: FPGA: Recv ZDACW
17-03-17 17:39:23.228 -07 000000547 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:39:23.228 -07 000000547 INF: Y Motor: Moving 1349 steps-28
17-03-17 17:39:23.238 -07 000000431 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:39:23.238 -07 000000448 INF: FPGA: 'ZDACW 29604' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 17:39:23.248 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:39:23.258 -07 000000448 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:23.258 -07 000000501 INF: FPGA: Recv ZDACR 29604
17-03-17 17:39:23.268 -07 000000448 INF: FPGA: 'ZDACR' command took 5 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:39:23.268 -07 000000448 INF: Z Motor: MoveAbsStepped took 53 ms (did NOT wait for settling yet))
17-03-17 17:39:23.408 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 392 ms.
17-03-17 17:39:23.408 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 17:39:23.408 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:23.408 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 394 ms.
17-03-17 17:39:23.408 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 17:39:23.408 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:23.408 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:23.418 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:39:23.418 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-17 17:39:23.418 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 17:39:23.488 -07 000000623 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:39:23.488 -07 000000431 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 248 ms to get response, and 277 ms overall
17-03-17 17:39:23.618 -07 000000623 INF: FPGA: Recv YMVTILE
17-03-17 17:39:23.618 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 393 ms overall
17-03-17 17:39:23.648 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:23.658 -07 000000623 INF: FPGA: Recv YRDPOS 146472
17-03-17 17:39:23.658 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 17:39:23.658 -07 000000547 INF: Y Motor: Encoder = 146472 = motor step 114431.3 = 71.5195 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:23.658 -07 000000547 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 17:39:23.658 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 393 ms, distance = 0.844 mm, average velocity = 2.147 mm/sec
17-03-17 17:39:24.608 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:24.608 -07 000000431 INF: FPGA: Recv YRDPOS 146473
17-03-17 17:39:24.618 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:24.618 -07 000000547 INF: Y Motor: Encoder = 146473 = motor step 114432.0 = 71.5200 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:24.628 -07 000000547 INF: Y Motor: After move to 71.532608, error = -0.012589, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:39:24.628 -07 000000547 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 17:39:24.628 -07 000000547 INF: Y Motor: Moved to 71.5200 after 1423 ms (table move)
17-03-17 17:39:24.638 -07 000000631 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135518 mm (DAC = 29604)
17-03-17 17:39:24.638 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:24.638 -07 000000431 INF: FPGA: Recv ZSGSRD 30382
17-03-17 17:39:24.648 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:39:24.648 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:24.648 -07 000000547 INF: FPGA: Recv ZSGSRD 30377
17-03-17 17:39:24.658 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:24.658 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:24.658 -07 000000431 INF: FPGA: Recv ZSGSRD 30379
17-03-17 17:39:24.668 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:24.668 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:24.668 -07 000000547 INF: FPGA: Recv ZSGSRD 30386
17-03-17 17:39:24.678 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:24.678 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:24.678 -07 000000547 INF: FPGA: Recv ZSGSRD 30384
17-03-17 17:39:24.688 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:24.688 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:24.688 -07 000000623 INF: FPGA: Recv ZSGSRD 30390
17-03-17 17:39:24.698 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:24.698 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:24.698 -07 000000547 INF: FPGA: Recv ZSGSRD 30386
17-03-17 17:39:24.708 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:24.708 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:24.708 -07 000000431 INF: FPGA: Recv ZSGSRD 30387
17-03-17 17:39:24.718 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:24.718 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:24.718 -07 000000431 INF: FPGA: Recv ZSGSRD 30382
17-03-17 17:39:24.728 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:24.728 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:24.728 -07 000000431 INF: FPGA: Recv ZSGSRD 30374
17-03-17 17:39:24.738 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:24.738 -07 000000631 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:24.738 -07 000000431 INF: FPGA: Recv ZPIEZORD 26259
17-03-17 17:39:24.748 -07 000000631 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:24.748 -07 000000631 INF: Z Motor: Piezo is near 36.1 V (nominally 0 to 100 V), expect near 45.2 V, since DAC is at 4.517 V. Piezo Error = -9.1 V.
17-03-17 17:39:24.748 -07 000000631 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.5 um, Read 10 ADC samples: Avg = 30383 (-134.7 uncal um), Error = 0.8 uncal um, Median = 30383 (-134.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 30374 (-134.7 uncal um), Max = 30390 (-134.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 17:39:24.748 -07 000000631 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30383, posNoise = 7, negNoise = 9
17-03-17 17:39:24.748 -07 000000631 INF: Z Motor: After move to -0.135518, error = 0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:24.748 -07 000000631 INF: Z Motor: Settle wait time = 1427 ms, measure time = 107 ms (allowed 150 ms), total time = 1534 ms
17-03-17 17:39:24.748 -07 000000631 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 17:39:24.798 -07 000000631 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1589 ms
17-03-17 17:39:24.798 -07 000000631 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:39:24.798 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:24.798 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:24.798 -07 000000623 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:24.798 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:24.808 -07 000000631 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:39:24.808 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:24.808 -07 000000631 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:24.808 -07 000000631 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:39:24.808 -07 000000631 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:24.808 -07 000000631 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:39:24.818 -07 000000631 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 17:39:24.818 -07 000000631 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-17 17:39:24.818 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:39:24.858 -07 000000623 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:39:25.058 -07 000000431 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:39:25.058 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:39:25.058 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:39:25.058 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) start.
17-03-17 17:39:25.068 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.014009,
17-03-17 17:39:25.098 -07 000000431 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:39:25.098 -07 000000547 INF: FPGA: Recv CAMSNAP
17-03-17 17:39:25.098 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 284 ms overall
17-03-17 17:39:25.178 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 17:39:25.178 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:25.178 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:39:25.178 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 17:39:25.198 -07 000000431 INF: Autofocus start
17-03-17 17:39:25.198 -07 000000431 INF: MeasureProfile start
17-03-17 17:39:25.198 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:25.198 -07 000000541 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:25.208 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:25.208 -07 000000547 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:39:25.208 -07 000000431 INF: MeasureProfile done
17-03-17 17:39:25.208 -07 000000431 INF: X=16  Z correction [um]=0.0530179
17-03-17 17:39:25.208 -07 000000431 INF: Autofocus finished
17-03-17 17:39:25.408 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:39:25.408 -07 000000547 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 197 ms to get response, and 207 ms overall
17-03-17 17:39:25.418 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.52001953125, Z-position -0.135510189514258. ----------
17-03-17 17:39:25.418 -07 000000610 INF: Cycle	3	Tile	15	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:39:25.418 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28128, sync = True, waitForSettling = True)
17-03-17 17:39:25.418 -07 000000610 INF: Z Motor: Moving to -0.128762 mm, started at -0.135510 mm, distance = 6.75 um
17-03-17 17:39:25.428 -07 000000610 INF: FPGA: Xmit ZDACW 28128\n [Z Motor]
17-03-17 17:39:25.428 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 17:39:25.438 -07 000000610 INF: FPGA: 'ZDACW 28128' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 17:39:25.438 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:25.438 -07 000000626 INF: FPGA: Recv ZDACR 28128
17-03-17 17:39:25.448 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:25.448 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:39:25.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:25.598 -07 000000486 INF: FPGA: Recv ZSGSRD 29338
17-03-17 17:39:25.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:25.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:25.608 -07 000000618 INF: FPGA: Recv ZSGSRD 29329
17-03-17 17:39:25.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:25.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:25.618 -07 000000486 INF: FPGA: Recv ZSGSRD 29330
17-03-17 17:39:25.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:25.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:25.628 -07 000000626 INF: FPGA: Recv ZSGSRD 29330
17-03-17 17:39:25.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:25.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:25.638 -07 000000486 INF: FPGA: Recv ZSGSRD 29334
17-03-17 17:39:25.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:25.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:25.648 -07 000000626 INF: FPGA: Recv ZSGSRD 29337
17-03-17 17:39:25.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:25.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:25.658 -07 000000475 INF: FPGA: Recv ZSGSRD 29336
17-03-17 17:39:25.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:25.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:25.668 -07 000000618 INF: FPGA: Recv ZSGSRD 29329
17-03-17 17:39:25.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:25.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:25.678 -07 000000431 INF: FPGA: Recv ZSGSRD 29336
17-03-17 17:39:25.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:25.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:25.688 -07 000000626 INF: FPGA: Recv ZSGSRD 29331
17-03-17 17:39:25.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:25.698 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:25.698 -07 000000486 INF: FPGA: Recv ZPIEZORD 24878
17-03-17 17:39:25.708 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:25.708 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.292 V. Piezo Error = -9.8 V.
17-03-17 17:39:25.708 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29333 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29332 (-128.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29329 (-128.0 uncal um), Max = 29338 (-128.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 17:39:25.708 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29333, posNoise = 5, negNoise = 4
17-03-17 17:39:25.708 -07 000000610 INF: Z Motor: After move to -0.128762, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:25.708 -07 000000610 INF: Z Motor: MoveAbsStepped took 288 ms)
17-03-17 17:39:25.708 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:25.708 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:25.708 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:25.708 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:39:25.708 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:39:25.708 -07 000000486 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:39:25.708 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:25.708 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:25.708 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:39:25.708 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:39:25.708 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:25.708 -07 000000486 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:39:25.718 -07 000000486 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:39:25.718 -07 000000486 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:39:25.718 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:39:25.718 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:39:25.728 -07 000000486 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 17:39:25.728 -07 000000486 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:39:25.728 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:39:25.728 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 17:39:25.728 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28305 150\n [Camera]
17-03-17 17:39:25.928 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:39:26.318 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:39:26.318 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:39:26.318 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:26.318 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:26.318 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 17:39:26.318 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:39:26.318 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:39:26.318 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:26.318 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:26.318 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 17:39:26.508 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28305 776
17-03-17 17:39:26.518 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:39:26.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:39:26.658 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:39:26.698 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 17:39:26.698 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 17:39:26.698 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:26.698 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 17:39:26.698 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 17:39:26.698 -07 000000623 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:26.698 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:26.698 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:26.698 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 17:39:26.708 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 17:39:26.848 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:39:26.848 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:39:26.848 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:26.848 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:26.848 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-17 17:39:26.848 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:39:26.848 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:39:26.848 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:26.848 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:26.848 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-17 17:39:27.038 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:39:27.038 -07 000000631 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:39:27.038 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28305 150' command took 3 ms to send, 1306 ms to get response, and 1312 ms overall
17-03-17 17:39:27.038 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:39:27.038 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.52001953125, Z-Position -0.128764766765409. ------
17-03-17 17:39:27.048 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:27.048 -07 000000631 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.13477 mm
17-03-17 17:39:27.048 -07 000000631 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:39:27.048 -07 000000608 INF: Z Motor: Entering MoveAbsStepped (DAC = 29441, sync = True, waitForSettling = False)
17-03-17 17:39:27.048 -07 000000608 INF: Z Motor: Moving to -0.134772 mm, started at -0.128765 mm, distance = -6.01 um
17-03-17 17:39:27.048 -07 000000627 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:27.048 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-17 17:39:27.048 -07 000000626 INF: Y Motor: Moving to 72.3626 mm, started at 71.5200 mm, delta = 0.8426 mm
17-03-17 17:39:27.058 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:27.058 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:27.058 -07 000000541 INF: FPGA: Recv YRDPOS 146473
17-03-17 17:39:27.068 -07 000000608 INF: FPGA: Xmit ZDACW 29441\n [Z Motor]
17-03-17 17:39:27.068 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 17:39:27.068 -07 000000626 INF: Y Motor: Encoder = 146473 = motor step 114432.0 = 71.5200 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:27.068 -07 000000626 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:39:27.068 -07 000000626 INF: Y Motor: Moving 1348 steps-27
17-03-17 17:39:27.068 -07 000000541 INF: FPGA: Recv ZDACW
17-03-17 17:39:27.078 -07 000000608 INF: FPGA: 'ZDACW 29441' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 17:39:27.078 -07 000000482 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:39:27.088 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:39:27.098 -07 000000608 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:27.098 -07 000000627 INF: FPGA: Recv ZDACR 29441
17-03-17 17:39:27.108 -07 000000608 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:39:27.108 -07 000000608 INF: Z Motor: MoveAbsStepped took 53 ms (did NOT wait for settling yet))
17-03-17 17:39:27.228 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 17:39:27.228 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 17:39:27.228 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:27.238 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 17:39:27.238 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 17:39:27.238 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:27.238 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:27.238 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 17:39:27.238 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 17:39:27.238 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 17:39:27.758 -07 000000623 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:39:27.758 -07 000000623 INF: FPGA: Recv YMVTILE
17-03-17 17:39:27.758 -07 000000482 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 670 ms to get response, and 700 ms overall
17-03-17 17:39:27.758 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 660 ms to get response, and 690 ms overall
17-03-17 17:39:27.788 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:27.788 -07 000000431 INF: FPGA: Recv YRDPOS 148173
17-03-17 17:39:27.798 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:27.798 -07 000000626 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:27.798 -07 000000626 INF: Y Motor: Position error before settling (table move) = -26 encoder counts (-0.013 mm)
17-03-17 17:39:27.798 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 690 ms, distance = 0.843 mm, average velocity = 1.221 mm/sec
17-03-17 17:39:28.748 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:28.748 -07 000000541 INF: FPGA: Recv YRDPOS 148173
17-03-17 17:39:28.758 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:28.758 -07 000000626 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:28.778 -07 000000626 INF: Y Motor: After move to 72.362610, error = -0.012512, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:39:28.778 -07 000000626 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:39:28.778 -07 000000626 INF: Y Motor: Moved to 72.3501 after 1723 ms (table move)
17-03-17 17:39:28.778 -07 000000631 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134772 mm (DAC = 29441)
17-03-17 17:39:28.778 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:28.778 -07 000000482 INF: FPGA: Recv ZSGSRD 30271
17-03-17 17:39:28.788 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:28.788 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:28.788 -07 000000623 INF: FPGA: Recv ZSGSRD 30271
17-03-17 17:39:28.798 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:28.798 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:28.798 -07 000000541 INF: FPGA: Recv ZSGSRD 30265
17-03-17 17:39:28.808 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:28.808 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:28.808 -07 000000626 INF: FPGA: Recv ZSGSRD 30262
17-03-17 17:39:28.818 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:28.818 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:28.818 -07 000000618 INF: FPGA: Recv ZSGSRD 30264
17-03-17 17:39:28.828 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:28.828 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:28.828 -07 000000431 INF: FPGA: Recv ZSGSRD 30267
17-03-17 17:39:28.838 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:28.838 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:28.838 -07 000000623 INF: FPGA: Recv ZSGSRD 30272
17-03-17 17:39:28.848 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:28.848 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:28.848 -07 000000431 INF: FPGA: Recv ZSGSRD 30267
17-03-17 17:39:28.858 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:28.858 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:28.858 -07 000000618 INF: FPGA: Recv ZSGSRD 30269
17-03-17 17:39:28.868 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:28.868 -07 000000631 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:28.868 -07 000000482 INF: FPGA: Recv ZSGSRD 30272
17-03-17 17:39:28.878 -07 000000631 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:28.878 -07 000000631 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:28.878 -07 000000448 INF: FPGA: Recv ZPIEZORD 26110
17-03-17 17:39:28.888 -07 000000631 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:28.888 -07 000000631 INF: Z Motor: Piezo is near 35.8 V (nominally 0 to 100 V), expect near 44.9 V, since DAC is at 4.492 V. Piezo Error = -9.1 V.
17-03-17 17:39:28.888 -07 000000631 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.8 um, Read 10 ADC samples: Avg = 30268 (-134.0 uncal um), Error = 0.8 uncal um, Median = 30268 (-134.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30262 (-133.9 uncal um), Max = 30272 (-134.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 17:39:28.888 -07 000000631 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30268, posNoise = 4, negNoise = 6
17-03-17 17:39:28.888 -07 000000631 INF: Z Motor: After move to -0.134772, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:28.888 -07 000000631 INF: Z Motor: Settle wait time = 1727 ms, measure time = 107 ms (allowed 150 ms), total time = 1834 ms
17-03-17 17:39:28.888 -07 000000631 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 17:39:28.938 -07 000000631 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1886 ms
17-03-17 17:39:28.938 -07 000000631 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:39:28.938 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:28.938 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:28.938 -07 000000448 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:28.938 -07 000000631 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:28.938 -07 000000541 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:39:28.938 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:28.938 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:28.938 -07 000000541 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:39:28.948 -07 000000541 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:28.948 -07 000000541 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:39:28.958 -07 000000541 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 17:39:28.958 -07 000000541 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-17 17:39:28.958 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:39:29.008 -07 000000631 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:39:29.208 -07 000000475 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:39:29.208 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:39:29.208 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:39:29.208 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2387972312, 0x0, 559484976) start.
17-03-17 17:39:29.248 -07 000000626 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:39:29.248 -07 000000631 INF: FPGA: Recv CAMSNAP
17-03-17 17:39:29.248 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 282 ms to get response, and 285 ms overall
17-03-17 17:39:29.328 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2387972312, 0x0, 559484976) end. Duration was 116 ms.
17-03-17 17:39:29.328 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:29.328 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:39:29.328 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-17 17:39:29.348 -07 000000618 INF: Autofocus start
17-03-17 17:39:29.348 -07 000000618 INF: MeasureProfile start
17-03-17 17:39:29.348 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:29.348 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:29.358 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:29.358 -07 000000482 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:39:29.358 -07 000000618 INF: MeasureProfile done
17-03-17 17:39:29.358 -07 000000618 INF: X=-7  Z correction [um]=-0.03747771
17-03-17 17:39:29.358 -07 000000618 INF: Autofocus finished
17-03-17 17:39:29.558 -07 000000623 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:39:29.558 -07 000000482 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:39:29.558 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.35009765625, Z-position -0.134771405117956. ----------
17-03-17 17:39:29.568 -07 000000610 INF: Cycle	3	Tile	16	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:39:29.568 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27946, sync = True, waitForSettling = True)
17-03-17 17:39:29.568 -07 000000610 INF: Z Motor: Moving to -0.127929 mm, started at -0.134771 mm, distance = 6.84 um
17-03-17 17:39:29.568 -07 000000610 INF: FPGA: Xmit ZDACW 27946\n [Z Motor]
17-03-17 17:39:29.568 -07 000000448 INF: FPGA: Recv ZDACW
17-03-17 17:39:29.578 -07 000000610 INF: FPGA: 'ZDACW 27946' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:29.578 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:29.578 -07 000000631 INF: FPGA: Recv ZDACR 27946
17-03-17 17:39:29.588 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:29.588 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:39:29.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:29.738 -07 000000618 INF: FPGA: Recv ZSGSRD 29201
17-03-17 17:39:29.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:29.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:29.748 -07 000000631 INF: FPGA: Recv ZSGSRD 29207
17-03-17 17:39:29.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:29.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:29.758 -07 000000618 INF: FPGA: Recv ZSGSRD 29200
17-03-17 17:39:29.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:29.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:29.768 -07 000000627 INF: FPGA: Recv ZSGSRD 29202
17-03-17 17:39:29.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:29.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:29.778 -07 000000623 INF: FPGA: Recv ZSGSRD 29202
17-03-17 17:39:29.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:29.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:29.788 -07 000000431 INF: FPGA: Recv ZSGSRD 29203
17-03-17 17:39:29.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:29.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:29.798 -07 000000482 INF: FPGA: Recv ZSGSRD 29202
17-03-17 17:39:29.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:29.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:29.808 -07 000000623 INF: FPGA: Recv ZSGSRD 29203
17-03-17 17:39:29.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:29.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:29.818 -07 000000431 INF: FPGA: Recv ZSGSRD 29206
17-03-17 17:39:29.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:29.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:29.828 -07 000000475 INF: FPGA: Recv ZSGSRD 29203
17-03-17 17:39:29.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:29.838 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:29.838 -07 000000448 INF: FPGA: Recv ZPIEZORD 24749
17-03-17 17:39:29.848 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:29.848 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.264 V. Piezo Error = -9.8 V.
17-03-17 17:39:29.848 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.9 um, Read 10 ADC samples: Avg = 29203 (-127.2 uncal um), Error = 0.8 uncal um, Median = 29202 (-127.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29200 (-127.1 uncal um), Max = 29207 (-127.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 17:39:29.848 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29203, posNoise = 4, negNoise = 3
17-03-17 17:39:29.848 -07 000000610 INF: Z Motor: After move to -0.127929, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:29.848 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 17:39:29.848 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:29.848 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:29.848 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:29.848 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:29.848 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:39:29.848 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:29.848 -07 000000623 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:39:29.848 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:39:29.848 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 17:39:29.848 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:39:29.848 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:39:29.848 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:39:29.858 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:29.858 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:39:29.858 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 17:39:29.858 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:39:29.858 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:39:29.858 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-17 17:39:29.868 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:39:29.868 -07 000000623 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:39:29.868 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28122 150\n [Camera]
17-03-17 17:39:30.068 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:39:30.438 -07 000000431 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 3.999021,
17-03-17 17:39:30.458 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:39:30.458 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:39:30.458 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:30.458 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:30.458 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-17 17:39:30.458 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:39:30.458 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:39:30.458 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:30.458 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:30.458 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 17:39:30.648 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28122 775
17-03-17 17:39:30.798 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-17 17:39:30.838 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 17:39:30.838 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:39:30.838 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:30.838 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 17:39:30.838 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 17:39:30.838 -07 000000623 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:30.838 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:30.838 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 17:39:30.838 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:30.848 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 17:39:30.988 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:39:30.988 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:39:30.988 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:31.118 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:39:31.118 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:39:31.118 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:31.118 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:31.118 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-17 17:39:31.128 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:31.128 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) start.
17-03-17 17:39:31.178 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:39:31.178 -07 000000458 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:39:31.178 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28122 150' command took 2 ms to send, 1306 ms to get response, and 1313 ms overall
17-03-17 17:39:31.178 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:39:31.178 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.35009765625, Z-Position -0.12792961918698. ------
17-03-17 17:39:31.188 -07 000000475 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:31.188 -07 000000448 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.13458 mm
17-03-17 17:39:31.188 -07 000000448 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:39:31.188 -07 000000458 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:31.188 -07 000000623 INF: Z Motor: Entering MoveAbsStepped (DAC = 29398, sync = True, waitForSettling = False)
17-03-17 17:39:31.188 -07 000000623 INF: Z Motor: Moving to -0.134575 mm, started at -0.127930 mm, distance = -6.65 um
17-03-17 17:39:31.188 -07 000000482 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-17 17:39:31.188 -07 000000482 INF: Y Motor: Moving to 73.1926 mm, started at 72.3501 mm, delta = 0.8425 mm
17-03-17 17:39:31.198 -07 000000623 INF: FPGA: Xmit ZDACW 29398\n [Z Motor]
17-03-17 17:39:31.198 -07 000000475 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:31.198 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 17:39:31.208 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:31.208 -07 000000623 INF: FPGA: 'ZDACW 29398' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 17:39:31.208 -07 000000627 INF: FPGA: Recv YRDPOS 148173
17-03-17 17:39:31.218 -07 000000475 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:39:31.218 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 17:39:31.218 -07 000000482 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:31.218 -07 000000482 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:39:31.218 -07 000000482 INF: Y Motor: Moving 1348 steps-26
17-03-17 17:39:31.228 -07 000000623 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:31.228 -07 000000458 INF: FPGA: Recv ZDACR 29398
17-03-17 17:39:31.238 -07 000000482 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:39:31.238 -07 000000623 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:39:31.238 -07 000000623 INF: Z Motor: MoveAbsStepped took 44 ms (did NOT wait for settling yet))
17-03-17 17:39:31.418 -07 000000429 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:39:31.418 -07 000000475 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 17:39:31.508 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1051332656, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 17:39:31.508 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 17:39:31.508 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:31.508 -07 000000631 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 17:39:31.508 -07 000000631 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 17:39:31.508 -07 000000631 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:31.508 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:31.508 -07 000000631 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:31.508 -07 000000631 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 524 ms.
17-03-17 17:39:31.518 -07 000000442 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:39:31.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:39:31.518 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 17:39:31.608 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 17:39:31.608 -07 000000482 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 17:39:31.638 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:31.648 -07 000000431 INF: FPGA: Recv YRDPOS 149865
17-03-17 17:39:31.648 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 17:39:31.648 -07 000000482 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:31.648 -07 000000482 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-17 17:39:31.648 -07 000000482 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.843 mm, average velocity = 2.128 mm/sec
17-03-17 17:39:32.598 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:32.598 -07 000000442 INF: FPGA: Recv YRDPOS 149865
17-03-17 17:39:32.608 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:32.608 -07 000000482 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:32.618 -07 000000482 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:39:32.628 -07 000000482 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:39:32.628 -07 000000482 INF: Y Motor: Moved to 73.1763 after 1434 ms (table move)
17-03-17 17:39:32.628 -07 000000448 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134575 mm (DAC = 29398)
17-03-17 17:39:32.628 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:32.628 -07 000000458 INF: FPGA: Recv ZSGSRD 30239
17-03-17 17:39:32.638 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:32.638 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:32.638 -07 000000482 INF: FPGA: Recv ZSGSRD 30233
17-03-17 17:39:32.648 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:32.648 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:32.648 -07 000000431 INF: FPGA: Recv ZSGSRD 30229
17-03-17 17:39:32.658 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:32.658 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:32.658 -07 000000482 INF: FPGA: Recv ZSGSRD 30235
17-03-17 17:39:32.668 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:32.668 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:32.668 -07 000000626 INF: FPGA: Recv ZSGSRD 30233
17-03-17 17:39:32.678 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:32.678 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:32.678 -07 000000618 INF: FPGA: Recv ZSGSRD 30246
17-03-17 17:39:32.688 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:32.688 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:32.688 -07 000000424 INF: FPGA: Recv ZSGSRD 30237
17-03-17 17:39:32.698 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:32.698 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:32.698 -07 000000442 INF: FPGA: Recv ZSGSRD 30234
17-03-17 17:39:32.708 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:32.708 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:32.708 -07 000000424 INF: FPGA: Recv ZSGSRD 30238
17-03-17 17:39:32.718 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:32.718 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:32.718 -07 000000442 INF: FPGA: Recv ZSGSRD 30239
17-03-17 17:39:32.728 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:32.728 -07 000000448 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:32.728 -07 000000424 INF: FPGA: Recv ZPIEZORD 26121
17-03-17 17:39:32.738 -07 000000448 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:32.738 -07 000000448 INF: Z Motor: Piezo is near 35.8 V (nominally 0 to 100 V), expect near 44.9 V, since DAC is at 4.486 V. Piezo Error = -9.1 V.
17-03-17 17:39:32.738 -07 000000448 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.6 um, Read 10 ADC samples: Avg = 30236 (-133.8 uncal um), Error = 0.8 uncal um, Median = 30236 (-133.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 30229 (-133.7 uncal um), Max = 30246 (-133.8 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 17:39:32.738 -07 000000448 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30236, posNoise = 10, negNoise = 7
17-03-17 17:39:32.738 -07 000000448 INF: Z Motor: After move to -0.134575, error = 0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:32.738 -07 000000448 INF: Z Motor: Settle wait time = 1437 ms, measure time = 108 ms (allowed 150 ms), total time = 1545 ms
17-03-17 17:39:32.738 -07 000000448 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-17 17:39:32.788 -07 000000448 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-17 17:39:32.788 -07 000000448 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:39:32.788 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:32.788 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:32.788 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:32.788 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:32.788 -07 000000431 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:39:32.788 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:32.788 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:32.788 -07 000000431 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:39:32.798 -07 000000431 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 17:39:32.798 -07 000000431 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:39:32.808 -07 000000431 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 17:39:32.808 -07 000000431 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 17:39:32.808 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:39:32.848 -07 000000482 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:39:33.048 -07 000000433 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:39:33.048 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:39:33.048 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:39:33.058 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) start.
17-03-17 17:39:33.088 -07 000000424 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:39:33.088 -07 000000458 INF: FPGA: Recv CAMSNAP
17-03-17 17:39:33.088 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 284 ms overall
17-03-17 17:39:33.178 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) end. Duration was 122 ms.
17-03-17 17:39:33.178 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:33.178 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 17:39:33.178 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 124 ms.
17-03-17 17:39:33.188 -07 000000433 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:33.188 -07 000000627 INF: Autofocus start
17-03-17 17:39:33.188 -07 000000627 INF: MeasureProfile start
17-03-17 17:39:33.188 -07 000000458 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:33.198 -07 000000433 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:33.198 -07 000000433 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:39:33.198 -07 000000627 INF: MeasureProfile done
17-03-17 17:39:33.198 -07 000000627 INF: X=9  Z correction [um]=0.01934518
17-03-17 17:39:33.198 -07 000000627 INF: Autofocus finished
17-03-17 17:39:33.398 -07 000000442 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:39:33.398 -07 000000433 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 196 ms to get response, and 205 ms overall
17-03-17 17:39:33.398 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.134565830329419. ----------
17-03-17 17:39:33.408 -07 000000610 INF: Cycle	3	Tile	17	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:39:33.408 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27915, sync = True, waitForSettling = True)
17-03-17 17:39:33.408 -07 000000610 INF: Z Motor: Moving to -0.127787 mm, started at -0.134566 mm, distance = 6.78 um
17-03-17 17:39:33.408 -07 000000610 INF: FPGA: Xmit ZDACW 27915\n [Z Motor]
17-03-17 17:39:33.408 -07 000000475 INF: FPGA: Recv ZDACW
17-03-17 17:39:33.418 -07 000000610 INF: FPGA: 'ZDACW 27915' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:33.418 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:33.418 -07 000000626 INF: FPGA: Recv ZDACR 27915
17-03-17 17:39:33.428 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:33.428 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:39:33.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:33.578 -07 000000482 INF: FPGA: Recv ZSGSRD 29183
17-03-17 17:39:33.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:33.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:33.588 -07 000000433 INF: FPGA: Recv ZSGSRD 29179
17-03-17 17:39:33.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:33.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:33.598 -07 000000458 INF: FPGA: Recv ZSGSRD 29180
17-03-17 17:39:33.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:33.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:33.608 -07 000000626 INF: FPGA: Recv ZSGSRD 29185
17-03-17 17:39:33.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:33.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:33.618 -07 000000424 INF: FPGA: Recv ZSGSRD 29185
17-03-17 17:39:33.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:33.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:33.628 -07 000000623 INF: FPGA: Recv ZSGSRD 29182
17-03-17 17:39:33.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:33.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:33.638 -07 000000475 INF: FPGA: Recv ZSGSRD 29185
17-03-17 17:39:33.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:33.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:33.648 -07 000000626 INF: FPGA: Recv ZSGSRD 29181
17-03-17 17:39:33.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:33.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:33.658 -07 000000627 INF: FPGA: Recv ZSGSRD 29182
17-03-17 17:39:33.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:33.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:33.668 -07 000000631 INF: FPGA: Recv ZSGSRD 29176
17-03-17 17:39:33.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:33.678 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:33.678 -07 000000482 INF: FPGA: Recv ZPIEZORD 24746
17-03-17 17:39:33.688 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:33.688 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.260 V. Piezo Error = -9.7 V.
17-03-17 17:39:33.688 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.8 um, Read 10 ADC samples: Avg = 29182 (-127.0 uncal um), Error = 0.8 uncal um, Median = 29182 (-127.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29176 (-127.0 uncal um), Max = 29185 (-127.0 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 17:39:33.688 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29182, posNoise = 3, negNoise = 6
17-03-17 17:39:33.688 -07 000000610 INF: Z Motor: After move to -0.127787, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:33.688 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 17:39:33.688 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:33.688 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:33.688 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:33.688 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:33.688 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:39:33.688 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:39:33.688 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:39:33.688 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:33.688 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:39:33.688 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:39:33.688 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 17:39:33.688 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:39:33.698 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:33.698 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:39:33.698 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 17:39:33.698 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:39:33.698 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:39:33.698 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:39:33.698 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 17:39:33.708 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:39:33.708 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 28091 150\n [Camera]
17-03-17 17:39:33.908 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:39:34.298 -07 000000631 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:39:34.298 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:39:34.298 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:34.298 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:39:34.298 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:39:34.298 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:34.418 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:34.418 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 17:39:34.418 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:34.418 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-17 17:39:34.488 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28091 775
17-03-17 17:39:34.638 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:39:34.788 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 17:39:34.788 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-17 17:39:34.788 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:34.788 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 369 ms.
17-03-17 17:39:34.788 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-17 17:39:34.788 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:34.788 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:34.788 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 495 ms.
17-03-17 17:39:34.798 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:34.798 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 498 ms.
17-03-17 17:39:34.828 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:39:34.828 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:39:34.828 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:34.828 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:39:34.828 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:39:34.828 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:34.828 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:34.828 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) start.
17-03-17 17:39:34.828 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:34.828 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1051332656, 0x0, 391868352) start.
17-03-17 17:39:35.018 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-17 17:39:35.018 -07 000000458 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:39:35.018 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 28091 150' command took 2 ms to send, 1304 ms to get response, and 1313 ms overall
17-03-17 17:39:35.018 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:39:35.018 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 18 at Y-position 73.17626953125, Z-Position -0.127794710732003. ------
17-03-17 17:39:35.028 -07 000000627 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.13407 mm
17-03-17 17:39:35.028 -07 000000627 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:39:35.028 -07 000000631 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:35.028 -07 000000458 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-17 17:39:35.028 -07 000000458 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-17 17:39:35.028 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 29288, sync = True, waitForSettling = False)
17-03-17 17:39:35.028 -07 000000429 INF: Z Motor: Moving to -0.134072 mm, started at -0.127795 mm, distance = -6.28 um
17-03-17 17:39:35.028 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:35.038 -07 000000631 INF: FPGA: 'FOCMRRCUR 80' command took 2 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:35.038 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:35.038 -07 000000626 INF: FPGA: Recv YRDPOS 149866
17-03-17 17:39:35.048 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 17:39:35.048 -07 000000458 INF: Y Motor: Encoder = 149866 = motor step 117082.8 = 73.1768 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:35.048 -07 000000429 INF: FPGA: Xmit ZDACW 29288\n [Z Motor]
17-03-17 17:39:35.048 -07 000000458 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:39:35.048 -07 000000458 INF: Y Motor: Moving 1353 steps-33
17-03-17 17:39:35.048 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 17:39:35.058 -07 000000631 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:39:35.058 -07 000000429 INF: FPGA: 'ZDACW 29288' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-17 17:39:35.068 -07 000000458 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:39:35.078 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:35.078 -07 000000626 INF: FPGA: Recv ZDACR 29288
17-03-17 17:39:35.088 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:39:35.088 -07 000000429 INF: Z Motor: MoveAbsStepped took 52 ms (did NOT wait for settling yet))
17-03-17 17:39:35.208 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 17:39:35.208 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 17:39:35.208 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:35.208 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1051332656, 0x0, 391868352) end. Duration was 375 ms.
17-03-17 17:39:35.208 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 17:39:35.208 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:35.208 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:35.218 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:35.218 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 17:39:35.218 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 17:39:35.258 -07 000000429 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:39:35.258 -07 000000631 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 17:39:35.438 -07 000000429 INF: FPGA: Recv YMVTILE
17-03-17 17:39:35.438 -07 000000458 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 17:39:35.468 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:35.468 -07 000000631 INF: FPGA: Recv YRDPOS 151570
17-03-17 17:39:35.478 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:35.478 -07 000000458 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:35.478 -07 000000458 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 17:39:35.478 -07 000000458 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.846 mm, average velocity = 2.143 mm/sec
17-03-17 17:39:35.818 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.033041,
17-03-17 17:39:36.428 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:36.428 -07 000000626 INF: FPGA: Recv YRDPOS 151570
17-03-17 17:39:36.438 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:36.438 -07 000000458 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:36.448 -07 000000458 INF: Y Motor: After move to 74.022606, error = -0.013817, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:39:36.448 -07 000000458 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:39:36.448 -07 000000458 INF: Y Motor: Moved to 74.0088 after 1417 ms (table move)
17-03-17 17:39:36.448 -07 000000627 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134072 mm (DAC = 29288)
17-03-17 17:39:36.448 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:36.458 -07 000000631 INF: FPGA: Recv ZSGSRD 30168
17-03-17 17:39:36.458 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 17:39:36.458 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:36.458 -07 000000424 INF: FPGA: Recv ZSGSRD 30161
17-03-17 17:39:36.468 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:36.468 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:36.468 -07 000000429 INF: FPGA: Recv ZSGSRD 30153
17-03-17 17:39:36.478 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:36.478 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:36.478 -07 000000424 INF: FPGA: Recv ZSGSRD 30156
17-03-17 17:39:36.488 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:36.488 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:36.488 -07 000000429 INF: FPGA: Recv ZSGSRD 30158
17-03-17 17:39:36.498 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:36.498 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:36.498 -07 000000626 INF: FPGA: Recv ZSGSRD 30159
17-03-17 17:39:36.508 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:36.508 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:36.508 -07 000000631 INF: FPGA: Recv ZSGSRD 30164
17-03-17 17:39:36.518 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:36.518 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:36.518 -07 000000458 INF: FPGA: Recv ZSGSRD 30165
17-03-17 17:39:36.518 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:39:36.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:39:36.528 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:36.528 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:36.528 -07 000000631 INF: FPGA: Recv ZSGSRD 30162
17-03-17 17:39:36.538 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:36.538 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:36.538 -07 000000618 INF: FPGA: Recv ZSGSRD 30157
17-03-17 17:39:36.548 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:36.548 -07 000000627 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:36.548 -07 000000631 INF: FPGA: Recv ZPIEZORD 26013
17-03-17 17:39:36.558 -07 000000627 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:36.558 -07 000000627 INF: Z Motor: Piezo is near 35.6 V (nominally 0 to 100 V), expect near 44.7 V, since DAC is at 4.469 V. Piezo Error = -9.1 V.
17-03-17 17:39:36.558 -07 000000627 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.1 um, Read 10 ADC samples: Avg = 30160 (-133.3 uncal um), Error = 0.8 uncal um, Median = 30160 (-133.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30153 (-133.2 uncal um), Max = 30168 (-133.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 17:39:36.558 -07 000000627 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30160, posNoise = 8, negNoise = 7
17-03-17 17:39:36.558 -07 000000627 INF: Z Motor: After move to -0.134072, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:36.558 -07 000000627 INF: Z Motor: Settle wait time = 1419 ms, measure time = 104 ms (allowed 150 ms), total time = 1523 ms
17-03-17 17:39:36.558 -07 000000627 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 17:39:36.608 -07 000000627 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1577 ms
17-03-17 17:39:36.608 -07 000000627 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:39:36.608 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:36.608 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:36.608 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:36.608 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:36.608 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:39:36.608 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:36.618 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:36.618 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:39:36.618 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:36.618 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:39:36.628 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 17:39:36.628 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 17:39:36.628 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:39:36.678 -07 000000424 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:39:36.878 -07 000000627 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:39:36.878 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:39:36.878 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:39:36.878 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) start.
17-03-17 17:39:36.918 -07 000000458 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:39:36.918 -07 000000409 INF: FPGA: Recv CAMSNAP
17-03-17 17:39:36.918 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 2 ms to send, 282 ms to get response, and 286 ms overall
17-03-17 17:39:36.998 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1086754920, 0x0, 559484976) end. Duration was 118 ms.
17-03-17 17:39:36.998 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:36.998 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:39:36.998 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 121 ms.
17-03-17 17:39:37.018 -07 000000424 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:37.018 -07 000000458 INF: Autofocus start
17-03-17 17:39:37.018 -07 000000458 INF: MeasureProfile start
17-03-17 17:39:37.018 -07 000000429 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:37.028 -07 000000424 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:37.028 -07 000000424 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:39:37.028 -07 000000458 INF: MeasureProfile done
17-03-17 17:39:37.028 -07 000000458 INF: X=0  Z correction [um]=-0.02394831
17-03-17 17:39:37.028 -07 000000458 INF: Autofocus finished
17-03-17 17:39:37.228 -07 000000429 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:39:37.228 -07 000000424 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 17:39:37.228 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0087890625, Z-position -0.134077590206645. ----------
17-03-17 17:39:37.238 -07 000000610 INF: Cycle	3	Tile	18	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:39:37.238 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27795, sync = True, waitForSettling = True)
17-03-17 17:39:37.238 -07 000000610 INF: Z Motor: Moving to -0.127237 mm, started at -0.134078 mm, distance = 6.84 um
17-03-17 17:39:37.238 -07 000000610 INF: FPGA: Xmit ZDACW 27795\n [Z Motor]
17-03-17 17:39:37.238 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 17:39:37.248 -07 000000610 INF: FPGA: 'ZDACW 27795' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:37.248 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:37.248 -07 000000409 INF: FPGA: Recv ZDACR 27795
17-03-17 17:39:37.258 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.258 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:39:37.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:37.408 -07 000000458 INF: FPGA: Recv ZSGSRD 29095
17-03-17 17:39:37.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:37.418 -07 000000626 INF: FPGA: Recv ZSGSRD 29094
17-03-17 17:39:37.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:37.428 -07 000000458 INF: FPGA: Recv ZSGSRD 29093
17-03-17 17:39:37.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:37.438 -07 000000409 INF: FPGA: Recv ZSGSRD 29096
17-03-17 17:39:37.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:37.448 -07 000000429 INF: FPGA: Recv ZSGSRD 29098
17-03-17 17:39:37.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:37.458 -07 000000409 INF: FPGA: Recv ZSGSRD 29094
17-03-17 17:39:37.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:37.468 -07 000000627 INF: FPGA: Recv ZSGSRD 29097
17-03-17 17:39:37.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:37.478 -07 000000424 INF: FPGA: Recv ZSGSRD 29098
17-03-17 17:39:37.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:37.488 -07 000000618 INF: FPGA: Recv ZSGSRD 29096
17-03-17 17:39:37.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:37.498 -07 000000458 INF: FPGA: Recv ZSGSRD 29093
17-03-17 17:39:37.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.508 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:37.508 -07 000000409 INF: FPGA: Recv ZPIEZORD 24635
17-03-17 17:39:37.518 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:37.518 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.4 V, since DAC is at 4.241 V. Piezo Error = -9.8 V.
17-03-17 17:39:37.518 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.2 um, Read 10 ADC samples: Avg = 29095 (-126.5 uncal um), Error = 0.8 uncal um, Median = 29096 (-126.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 29093 (-126.5 uncal um), Max = 29098 (-126.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-17 17:39:37.518 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29095, posNoise = 3, negNoise = 2
17-03-17 17:39:37.518 -07 000000610 INF: Z Motor: After move to -0.127237, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:37.518 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 17:39:37.518 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:37.518 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:37.518 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:39:37.518 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:37.518 -07 000000409 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:39:37.518 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:39:37.518 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:37.518 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:37.518 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 17:39:37.518 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:39:37.518 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:37.518 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:39:37.518 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:37.528 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:39:37.528 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:39:37.528 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:39:37.528 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 17:39:37.528 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 17:39:37.538 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 17:39:37.538 -07 000000409 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:39:37.538 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 27972 150\n [Camera]
17-03-17 17:39:37.738 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:39:38.128 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:39:38.128 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:39:38.128 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:38.128 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:38.128 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1143991736, 0x0, 391868352) start.
17-03-17 17:39:38.128 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:39:38.128 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:39:38.128 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:38.128 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:38.128 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 17:39:38.318 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27972 775
17-03-17 17:39:38.468 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:39:38.508 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1143991736, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 17:39:38.508 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 17:39:38.508 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:38.508 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 17:39:38.508 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 17:39:38.508 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:38.508 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:38.508 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:39:38.508 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:38.518 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 17:39:38.658 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:39:38.658 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:39:38.658 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:38.658 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:38.658 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 17:39:38.658 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:39:38.658 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:39:38.658 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:38.658 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:38.658 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 17:39:38.848 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:39:38.848 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:39:38.848 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 27972 150' command took 2 ms to send, 1307 ms to get response, and 1313 ms overall
17-03-17 17:39:38.848 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 17:39:38.858 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.0087890625, Z-Position -0.12723580427567. ------
17-03-17 17:39:38.858 -07 000000458 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:38.858 -07 000000429 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.13353 mm
17-03-17 17:39:38.858 -07 000000429 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 17:39:38.858 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-17 17:39:38.858 -07 000000424 INF: Y Motor: Moving to 74.8526 mm, started at 74.0088 mm, delta = 0.8438 mm
17-03-17 17:39:38.858 -07 000000409 INF: Z Motor: Entering MoveAbsStepped (DAC = 29169, sync = True, waitForSettling = False)
17-03-17 17:39:38.858 -07 000000409 INF: Z Motor: Moving to -0.133527 mm, started at -0.127236 mm, distance = -6.29 um
17-03-17 17:39:38.858 -07 000000631 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:38.868 -07 000000458 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 17:39:38.868 -07 000000409 INF: FPGA: Xmit ZDACW 29169\n [Z Motor]
17-03-17 17:39:38.868 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 17:39:38.878 -07 000000458 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 17:39:38.878 -07 000000409 INF: FPGA: 'ZDACW 29169' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:38.888 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:38.888 -07 000000608 INF: FPGA: Recv YRDPOS 151571
17-03-17 17:39:38.898 -07 000000409 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:38.898 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-17 17:39:38.898 -07 000000424 INF: Y Motor: Encoder = 151571 = motor step 118414.8 = 74.0093 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:38.898 -07 000000608 INF: FPGA: Recv ZDACR 29169
17-03-17 17:39:38.898 -07 000000424 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 17:39:38.898 -07 000000424 INF: Y Motor: Moving 1349 steps-28
17-03-17 17:39:38.908 -07 000000409 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:39:38.908 -07 000000409 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-17 17:39:38.908 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 17:39:39.038 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 17:39:39.038 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:39:39.038 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:39.038 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 17:39:39.038 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 17:39:39.038 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:39.048 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:39.048 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:39:39.048 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 17:39:39.058 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 17:39:39.078 -07 000000547 INF: FPGA: Recv FOCMRRFOC
17-03-17 17:39:39.078 -07 000000458 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 212 ms overall
17-03-17 17:39:39.278 -07 000000486 INF: FPGA: Recv YMVTILE
17-03-17 17:39:39.278 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-17 17:39:39.298 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:39.308 -07 000000458 INF: FPGA: Recv YRDPOS 153257
17-03-17 17:39:39.308 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 17:39:39.308 -07 000000424 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:39.308 -07 000000424 INF: Y Motor: Position error before settling (table move) = -41 encoder counts (-0.020 mm)
17-03-17 17:39:39.308 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.844 mm, average velocity = 2.197 mm/sec
17-03-17 17:39:40.258 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 17:39:40.258 -07 000000618 INF: FPGA: Recv YRDPOS 153257
17-03-17 17:39:40.268 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:40.268 -07 000000424 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 17:39:40.278 -07 000000424 INF: Y Motor: After move to 74.852608, error = -0.020088, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 17:39:40.278 -07 000000424 INF: Y Motor: Position error after settling (table move) = -41 encoder counts (-0.020 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 17:39:40.278 -07 000000424 INF: Y Motor: Moved to 74.8325 after 1414 ms (table move)
17-03-17 17:39:40.278 -07 000000429 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133527 mm (DAC = 29169)
17-03-17 17:39:40.278 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:40.288 -07 000000458 INF: FPGA: Recv ZSGSRD 30071
17-03-17 17:39:40.288 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 17:39:40.288 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:40.288 -07 000000618 INF: FPGA: Recv ZSGSRD 30088
17-03-17 17:39:40.298 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:40.298 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:40.298 -07 000000458 INF: FPGA: Recv ZSGSRD 30071
17-03-17 17:39:40.308 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:40.308 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:40.308 -07 000000458 INF: FPGA: Recv ZSGSRD 30067
17-03-17 17:39:40.318 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:40.318 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:40.318 -07 000000424 INF: FPGA: Recv ZSGSRD 30077
17-03-17 17:39:40.328 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:40.328 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:40.328 -07 000000458 INF: FPGA: Recv ZSGSRD 30067
17-03-17 17:39:40.338 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:40.338 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:40.338 -07 000000458 INF: FPGA: Recv ZSGSRD 30076
17-03-17 17:39:40.348 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:40.348 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:40.348 -07 000000424 INF: FPGA: Recv ZSGSRD 30083
17-03-17 17:39:40.358 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:40.358 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:40.358 -07 000000626 INF: FPGA: Recv ZSGSRD 30078
17-03-17 17:39:40.368 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:40.368 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:40.368 -07 000000626 INF: FPGA: Recv ZSGSRD 30078
17-03-17 17:39:40.378 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:40.378 -07 000000429 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:40.378 -07 000000458 INF: FPGA: Recv ZPIEZORD 25925
17-03-17 17:39:40.388 -07 000000429 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:40.388 -07 000000429 INF: Z Motor: Piezo is near 35.4 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.451 V. Piezo Error = -9.1 V.
17-03-17 17:39:40.388 -07 000000429 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.5 um, Read 10 ADC samples: Avg = 30076 (-132.8 uncal um), Error = 0.8 uncal um, Median = 30076 (-132.8 uncal um), StdDev = 7 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 30067 (-132.7 uncal um), Max = 30088 (-132.8 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 17:39:40.388 -07 000000429 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30076, posNoise = 12, negNoise = 9
17-03-17 17:39:40.388 -07 000000429 INF: Z Motor: After move to -0.133527, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:40.388 -07 000000429 INF: Z Motor: Settle wait time = 1418 ms, measure time = 103 ms (allowed 150 ms), total time = 1521 ms
17-03-17 17:39:40.388 -07 000000429 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 17:39:40.438 -07 000000429 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1573 ms
17-03-17 17:39:40.438 -07 000000429 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 17:39:40.438 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:40.438 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:40.438 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:40.438 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 17:39:40.438 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:40.438 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:40.438 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:40.438 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 17:39:40.448 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 17:39:40.448 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 17:39:40.458 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-17 17:39:40.458 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-17 17:39:40.458 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 17:39:40.508 -07 000000618 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 17:39:40.708 -07 000000429 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 17:39:40.708 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 17:39:40.708 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 17:39:40.708 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2270629648, 0x0, 559484976) start.
17-03-17 17:39:40.748 -07 000000429 INF: FPGA: Recv @CAMSNAP 280
17-03-17 17:39:40.748 -07 000000608 INF: FPGA: Recv CAMSNAP
17-03-17 17:39:40.748 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 285 ms overall
17-03-17 17:39:40.828 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2270629648, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 17:39:40.828 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:40.838 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 17:39:40.838 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-17 17:39:40.848 -07 000000608 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 17:39:40.848 -07 000000424 INF: Autofocus start
17-03-17 17:39:40.848 -07 000000424 INF: MeasureProfile start
17-03-17 17:39:40.848 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-17 17:39:40.858 -07 000000608 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:39:40.868 -07 000000608 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 17:39:40.868 -07 000000424 INF: MeasureProfile done
17-03-17 17:39:40.868 -07 000000424 INF: X=0  Z correction [um]=-0.02394831
17-03-17 17:39:40.868 -07 000000424 INF: Autofocus finished
17-03-17 17:39:41.068 -07 000000618 INF: FPGA: Recv FOCMRRIMG
17-03-17 17:39:41.068 -07 000000608 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 212 ms overall
17-03-17 17:39:41.068 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83251953125, Z-position -0.133537956386738. ----------
17-03-17 17:39:41.078 -07 000000610 INF: Cycle	3	Tile	19	Exposure Settings		A	390	G	188	T	188	C	390
17-03-17 17:39:41.078 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27676, sync = True, waitForSettling = True)
17-03-17 17:39:41.078 -07 000000610 INF: Z Motor: Moving to -0.126693 mm, started at -0.133538 mm, distance = 6.85 um
17-03-17 17:39:41.078 -07 000000610 INF: FPGA: Xmit ZDACW 27676\n [Z Motor]
17-03-17 17:39:41.078 -07 000000608 INF: FPGA: Recv ZDACW
17-03-17 17:39:41.088 -07 000000610 INF: FPGA: 'ZDACW 27676' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:41.088 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:41.088 -07 000000618 INF: FPGA: Recv ZDACR 27676
17-03-17 17:39:41.098 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:41.098 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 17:39:41.178 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.015368,
17-03-17 17:39:41.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:41.248 -07 000000429 INF: FPGA: Recv ZSGSRD 29013
17-03-17 17:39:41.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 17:39:41.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:41.258 -07 000000424 INF: FPGA: Recv ZSGSRD 29011
17-03-17 17:39:41.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:41.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:41.268 -07 000000429 INF: FPGA: Recv ZSGSRD 29010
17-03-17 17:39:41.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:41.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:41.278 -07 000000626 INF: FPGA: Recv ZSGSRD 29014
17-03-17 17:39:41.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:41.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:41.288 -07 000000608 INF: FPGA: Recv ZSGSRD 29013
17-03-17 17:39:41.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:41.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:41.298 -07 000000626 INF: FPGA: Recv ZSGSRD 29011
17-03-17 17:39:41.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:41.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:41.308 -07 000000608 INF: FPGA: Recv ZSGSRD 29011
17-03-17 17:39:41.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:41.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:41.318 -07 000000429 INF: FPGA: Recv ZSGSRD 29011
17-03-17 17:39:41.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:41.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:41.328 -07 000000424 INF: FPGA: Recv ZSGSRD 29012
17-03-17 17:39:41.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:41.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 17:39:41.338 -07 000000626 INF: FPGA: Recv ZSGSRD 29013
17-03-17 17:39:41.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:41.348 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 17:39:41.348 -07 000000424 INF: FPGA: Recv ZPIEZORD 24565
17-03-17 17:39:41.358 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:41.358 -07 000000610 INF: Z Motor: Piezo is near 32.5 V (nominally 0 to 100 V), expect near 42.2 V, since DAC is at 4.223 V. Piezo Error = -9.8 V.
17-03-17 17:39:41.358 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.7 um, Read 10 ADC samples: Avg = 29012 (-125.9 uncal um), Error = 0.8 uncal um, Median = 29012 (-125.9 uncal um), StdDev = 1 (0.0 uncal um), Range = 4 (0.0 uncal um), Min = 29010 (-125.9 uncal um), Max = 29014 (-125.9 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-17 17:39:41.358 -07 000000610 INF: Z Motor: ADC noise = 2, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29012, posNoise = 2, negNoise = 2
17-03-17 17:39:41.358 -07 000000610 INF: Z Motor: After move to -0.126693, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 17:39:41.358 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 17:39:41.358 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 17:39:41.358 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 17:39:41.358 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 17:39:41.358 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 17:39:41.358 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 17:39:41.358 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 17:39:41.358 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 17:39:41.358 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 17:39:41.358 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 17:39:41.358 -07 000000458 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 17:39:41.358 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 17:39:41.358 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 17:39:41.368 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 17:39:41.368 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 17:39:41.368 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 17:39:41.368 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 17:39:41.378 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 17:39:41.378 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 17:39:41.378 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 17:39:41.378 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 17:39:41.378 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 390 390 188 188 27853 150\n [Camera]
17-03-17 17:39:41.518 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:39:41.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 2. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:39:41.578 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 17:39:41.968 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 582
17-03-17 17:39:41.968 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 582
17-03-17 17:39:41.968 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:41.968 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:41.968 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1428998304, 0x0, 391868352) start.
17-03-17 17:39:41.968 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 582
17-03-17 17:39:41.968 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 582
17-03-17 17:39:41.968 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:41.968 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:41.968 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1464420568, 0x0, 418435064) start.
17-03-17 17:39:42.158 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27853 775
17-03-17 17:39:42.308 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 925
17-03-17 17:39:42.338 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1464420568, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 17:39:42.338 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 17:39:42.348 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:42.348 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1428998304, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 17:39:42.348 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 17:39:42.348 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:42.348 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:42.348 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 17:39:42.348 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 17:39:42.358 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 17:39:42.498 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1113
17-03-17 17:39:42.498 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1113
17-03-17 17:39:42.498 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 17:39:42.498 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 17:39:42.498 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 17:39:42.498 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1113
17-03-17 17:39:42.498 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1113
17-03-17 17:39:42.508 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 17:39:42.508 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 17:39:42.508 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 17:39:42.688 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1305
17-03-17 17:39:42.688 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-17 17:39:42.688 -07 000000610 INF: FPGA: 'CAMDBLSNAP 390 390 188 188 27853 150' command took 2 ms to send, 1306 ms to get response, and 1312 ms overall
17-03-17 17:39:42.888 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 389 ms.
17-03-17 17:39:42.888 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 17:39:42.888 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:42.888 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 386 ms.
17-03-17 17:39:42.888 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 17:39:42.888 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 17:39:42.898 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 17:39:42.898 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 17:39:42.898 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-17 17:39:42.898 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-17 17:39:42.898 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-17 17:39:42.938 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 41 ms.
17-03-17 17:39:42.938 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-17 17:39:42.978 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms.
17-03-17 17:39:42.998 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-17 17:39:42.998 -07 000000610 INF: Imaging Cycle 3: ScanTilesCommand Cycle 3 time end. Duration was 163754 ms.
17-03-17 17:39:42.998 -07 000000610 INF: =================== Cycle #3 ===================
17-03-17 17:39:42.998 -07 000000610 INF: ===================  ===================
17-03-17 17:39:42.998 -07 000000448 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-17 17:39:42.998 -07 000000610 INF: Z Settling Test: Move -30.000 um from -150.000 to -180.000 um, start hold = 1000 ms, end hold = 1000 ms, min rise = 0, max rise = 100 ms, max settle = 150 ms, tol = 0.150 um, settling window = 200 ms, final window = 100 ms
17-03-17 17:39:43.008 -07 000000623 INF: FPGA: Recv EXLED1ADCR 26
17-03-17 17:39:43.008 -07 000000448 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:39:43.008 -07 000000448 INF: GreenLED: Using Green data: Photodiode ADC 26 --> 0.0 mW (old method), or 1.9 mW (new method). Difference = 1.9 mW
17-03-17 17:39:43.008 -07 000000424 INF: FPGA: Xmit ZDACW 32768\n [Z Motor]
17-03-17 17:39:43.008 -07 000000448 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.015368, FrontChillerHeatSinkTemperature: 0.08858, AmbientTemperature: 18.66085, FlowCellCompartmentTemperature: 21.99981, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.39178, GreenLEDSensorTemperature: 26.31454, PhotodiodePowerAdcGreen: 26, PhotodiodePowerMwGreen: 1.927049
17-03-17 17:39:43.008 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 17:39:43.018 -07 000000424 INF: FPGA: 'ZDACW 32768' command took 1 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:43.018 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:43.018 -07 000000458 INF: FPGA: Recv ZDACR 32768
17-03-17 17:39:43.028 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:43.028 -07 000000610 INF: WaitCommand(1000) start
17-03-17 17:39:44.038 -07 000000610 INF: WaitCommand(1000) end
17-03-17 17:39:44.038 -07 000000610 INF: Z Motor: Arming flight recorder capture 1000 samples every 1000 uS starting 0 uS after moving ZMotor
17-03-17 17:39:44.038 -07 000000610 INF: FPGA: Xmit ZFLTACQUIRE 1 1000 1000 0\n [Z Motor]
17-03-17 17:39:44.038 -07 000000448 INF: FPGA: Recv ZFLTACQUIRE
17-03-17 17:39:44.048 -07 000000610 INF: FPGA: 'ZFLTACQUIRE 1 1000 1000 0' command took 1 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:44.048 -07 000000610 INF: FPGA: Xmit ZDACW 39321\n [Z Motor]
17-03-17 17:39:44.048 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 17:39:44.058 -07 000000610 INF: FPGA: 'ZDACW 39321' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:44.058 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:44.058 -07 000000433 INF: FPGA: Recv ZDACR 39321
17-03-17 17:39:44.068 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:44.068 -07 000000429 INF: Z Motor: Waiting for flight recorder to capture 1000 samples every 1000 uS starting 0 uS after moving ZMotor
17-03-17 17:39:44.068 -07 000000429 INF: FPGA: Xmit ZFLTWAIT\n [Z Motor]
17-03-17 17:39:45.048 -07 000000618 INF: FPGA: Recv ZFLTWAIT
17-03-17 17:39:45.048 -07 000000429 INF: FPGA: 'ZFLTWAIT' command took 0 ms to send, 973 ms to get response, and 980 ms overall
17-03-17 17:39:45.048 -07 000000429 INF: Z Motor: Flight recorder finished capturing 1000 samples 980 ms after starting to wait
17-03-17 17:39:45.048 -07 000000610 INF: Z Motor: Reading flight recorder data: 1000 samples every 1000 uS starting 0 uS after starting to move ZMotor
17-03-17 17:39:45.048 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 1\n [Z Motor]
17-03-17 17:39:45.058 -07 000000623 INF: FPGA: Recv ZFLTREAD 32639 32640 32654 32696 32770 
17-03-17 17:39:45.058 -07 000000610 INF: FPGA: 'ZFLTREAD 5 1' command took 0 ms to send, 2 ms to get response, and 6 ms overall
17-03-17 17:39:45.058 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 6\n [Z Motor]
17-03-17 17:39:45.058 -07 000000424 INF: FPGA: Recv ZFLTREAD 32867 33018 33213 33446 33667 
17-03-17 17:39:45.068 -07 000000610 INF: FPGA: 'ZFLTREAD 5 6' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:45.068 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 11\n [Z Motor]
17-03-17 17:39:45.068 -07 000000482 INF: FPGA: Recv ZFLTREAD 33950 34245 34500 34776 35049 
17-03-17 17:39:45.078 -07 000000610 INF: FPGA: 'ZFLTREAD 5 11' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.078 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 16\n [Z Motor]
17-03-17 17:39:45.078 -07 000000623 INF: FPGA: Recv ZFLTREAD 35306 35516 35737 35955 36126 
17-03-17 17:39:45.088 -07 000000610 INF: FPGA: 'ZFLTREAD 5 16' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.088 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 21\n [Z Motor]
17-03-17 17:39:45.088 -07 000000626 INF: FPGA: Recv ZFLTREAD 36301 36444 36575 36676 36781 
17-03-17 17:39:45.098 -07 000000610 INF: FPGA: 'ZFLTREAD 5 21' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.098 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 26\n [Z Motor]
17-03-17 17:39:45.098 -07 000000608 INF: FPGA: Recv ZFLTREAD 36865 36943 37011 37069 37111 
17-03-17 17:39:45.108 -07 000000610 INF: FPGA: 'ZFLTREAD 5 26' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.108 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 31\n [Z Motor]
17-03-17 17:39:45.108 -07 000000448 INF: FPGA: Recv ZFLTREAD 37147 37180 37208 37235 37262 
17-03-17 17:39:45.118 -07 000000610 INF: FPGA: 'ZFLTREAD 5 31' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.118 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 36\n [Z Motor]
17-03-17 17:39:45.118 -07 000000618 INF: FPGA: Recv ZFLTREAD 37275 37289 37296 37305 37314 
17-03-17 17:39:45.128 -07 000000610 INF: FPGA: 'ZFLTREAD 5 36' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.128 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 41\n [Z Motor]
17-03-17 17:39:45.128 -07 000000608 INF: FPGA: Recv ZFLTREAD 37321 37327 37328 37332 37331 
17-03-17 17:39:45.138 -07 000000610 INF: FPGA: 'ZFLTREAD 5 41' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.138 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 46\n [Z Motor]
17-03-17 17:39:45.138 -07 000000608 INF: FPGA: Recv ZFLTREAD 37331 37335 37338 37343 37339 
17-03-17 17:39:45.148 -07 000000610 INF: FPGA: 'ZFLTREAD 5 46' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.148 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 51\n [Z Motor]
17-03-17 17:39:45.148 -07 000000608 INF: FPGA: Recv ZFLTREAD 37335 37339 37335 37335 37332 
17-03-17 17:39:45.158 -07 000000610 INF: FPGA: 'ZFLTREAD 5 51' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.158 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 56\n [Z Motor]
17-03-17 17:39:45.158 -07 000000618 INF: FPGA: Recv ZFLTREAD 37339 37337 37335 37334 37332 
17-03-17 17:39:45.168 -07 000000610 INF: FPGA: 'ZFLTREAD 5 56' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.168 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 61\n [Z Motor]
17-03-17 17:39:45.168 -07 000000618 INF: FPGA: Recv ZFLTREAD 37331 37333 37334 37330 37330 
17-03-17 17:39:45.178 -07 000000610 INF: FPGA: 'ZFLTREAD 5 61' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.178 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 66\n [Z Motor]
17-03-17 17:39:45.178 -07 000000618 INF: FPGA: Recv ZFLTREAD 37329 37327 37324 37326 37325 
17-03-17 17:39:45.188 -07 000000610 INF: FPGA: 'ZFLTREAD 5 66' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:45.188 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 71\n [Z Motor]
17-03-17 17:39:45.188 -07 000000626 INF: FPGA: Recv ZFLTREAD 37325 37323 37318 37323 37319 
17-03-17 17:39:45.198 -07 000000610 INF: FPGA: 'ZFLTREAD 5 71' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.198 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 76\n [Z Motor]
17-03-17 17:39:45.198 -07 000000626 INF: FPGA: Recv ZFLTREAD 37313 37320 37318 37317 37310 
17-03-17 17:39:45.208 -07 000000610 INF: FPGA: 'ZFLTREAD 5 76' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.208 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 81\n [Z Motor]
17-03-17 17:39:45.208 -07 000000618 INF: FPGA: Recv ZFLTREAD 37315 37316 37316 37309 37319 
17-03-17 17:39:45.218 -07 000000610 INF: FPGA: 'ZFLTREAD 5 81' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.218 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 86\n [Z Motor]
17-03-17 17:39:45.218 -07 000000482 INF: FPGA: Recv ZFLTREAD 37315 37312 37311 37313 37315 
17-03-17 17:39:45.228 -07 000000610 INF: FPGA: 'ZFLTREAD 5 86' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.228 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 91\n [Z Motor]
17-03-17 17:39:45.228 -07 000000618 INF: FPGA: Recv ZFLTREAD 37313 37314 37313 37314 37312 
17-03-17 17:39:45.238 -07 000000610 INF: FPGA: 'ZFLTREAD 5 91' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.238 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 96\n [Z Motor]
17-03-17 17:39:45.238 -07 000000448 INF: FPGA: Recv ZFLTREAD 37311 37316 37313 37313 37315 
17-03-17 17:39:45.248 -07 000000610 INF: FPGA: 'ZFLTREAD 5 96' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.248 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 101\n [Z Motor]
17-03-17 17:39:45.248 -07 000000608 INF: FPGA: Recv ZFLTREAD 37313 37318 37318 37314 37315 
17-03-17 17:39:45.258 -07 000000610 INF: FPGA: 'ZFLTREAD 5 101' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.258 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 106\n [Z Motor]
17-03-17 17:39:45.258 -07 000000626 INF: FPGA: Recv ZFLTREAD 37314 37316 37318 37312 37313 
17-03-17 17:39:45.268 -07 000000610 INF: FPGA: 'ZFLTREAD 5 106' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.268 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 111\n [Z Motor]
17-03-17 17:39:45.268 -07 000000618 INF: FPGA: Recv ZFLTREAD 37313 37314 37308 37311 37308 
17-03-17 17:39:45.278 -07 000000610 INF: FPGA: 'ZFLTREAD 5 111' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.278 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 116\n [Z Motor]
17-03-17 17:39:45.278 -07 000000618 INF: FPGA: Recv ZFLTREAD 37312 37306 37311 37310 37312 
17-03-17 17:39:45.288 -07 000000610 INF: FPGA: 'ZFLTREAD 5 116' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.288 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 121\n [Z Motor]
17-03-17 17:39:45.288 -07 000000608 INF: FPGA: Recv ZFLTREAD 37311 37311 37311 37313 37310 
17-03-17 17:39:45.298 -07 000000610 INF: FPGA: 'ZFLTREAD 5 121' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.298 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 126\n [Z Motor]
17-03-17 17:39:45.298 -07 000000448 INF: FPGA: Recv ZFLTREAD 37305 37308 37315 37311 37310 
17-03-17 17:39:45.308 -07 000000610 INF: FPGA: 'ZFLTREAD 5 126' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.308 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 131\n [Z Motor]
17-03-17 17:39:45.308 -07 000000626 INF: FPGA: Recv ZFLTREAD 37311 37313 37316 37311 37309 
17-03-17 17:39:45.318 -07 000000610 INF: FPGA: 'ZFLTREAD 5 131' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.318 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 136\n [Z Motor]
17-03-17 17:39:45.318 -07 000000448 INF: FPGA: Recv ZFLTREAD 37312 37312 37310 37313 37310 
17-03-17 17:39:45.328 -07 000000610 INF: FPGA: 'ZFLTREAD 5 136' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.328 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 141\n [Z Motor]
17-03-17 17:39:45.328 -07 000000608 INF: FPGA: Recv ZFLTREAD 37312 37307 37311 37311 37311 
17-03-17 17:39:45.338 -07 000000610 INF: FPGA: 'ZFLTREAD 5 141' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.338 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 146\n [Z Motor]
17-03-17 17:39:45.338 -07 000000448 INF: FPGA: Recv ZFLTREAD 37309 37311 37309 37307 37312 
17-03-17 17:39:45.348 -07 000000610 INF: FPGA: 'ZFLTREAD 5 146' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.348 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 151\n [Z Motor]
17-03-17 17:39:45.348 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37308 37312 37308 37310 
17-03-17 17:39:45.358 -07 000000610 INF: FPGA: 'ZFLTREAD 5 151' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.358 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 156\n [Z Motor]
17-03-17 17:39:45.358 -07 000000448 INF: FPGA: Recv ZFLTREAD 37307 37307 37311 37309 37307 
17-03-17 17:39:45.368 -07 000000610 INF: FPGA: 'ZFLTREAD 5 156' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.368 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 161\n [Z Motor]
17-03-17 17:39:45.368 -07 000000618 INF: FPGA: Recv ZFLTREAD 37308 37308 37310 37305 37309 
17-03-17 17:39:45.378 -07 000000610 INF: FPGA: 'ZFLTREAD 5 161' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.378 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 166\n [Z Motor]
17-03-17 17:39:45.378 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37312 37308 37312 37311 
17-03-17 17:39:45.388 -07 000000610 INF: FPGA: 'ZFLTREAD 5 166' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.388 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 171\n [Z Motor]
17-03-17 17:39:45.388 -07 000000482 INF: FPGA: Recv ZFLTREAD 37312 37309 37309 37316 37312 
17-03-17 17:39:45.398 -07 000000610 INF: FPGA: 'ZFLTREAD 5 171' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.398 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 176\n [Z Motor]
17-03-17 17:39:45.398 -07 000000626 INF: FPGA: Recv ZFLTREAD 37313 37310 37313 37313 37311 
17-03-17 17:39:45.408 -07 000000610 INF: FPGA: 'ZFLTREAD 5 176' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.408 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 181\n [Z Motor]
17-03-17 17:39:45.408 -07 000000448 INF: FPGA: Recv ZFLTREAD 37311 37315 37315 37311 37308 
17-03-17 17:39:45.418 -07 000000610 INF: FPGA: 'ZFLTREAD 5 181' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.418 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 186\n [Z Motor]
17-03-17 17:39:45.418 -07 000000618 INF: FPGA: Recv ZFLTREAD 37310 37312 37307 37312 37312 
17-03-17 17:39:45.428 -07 000000610 INF: FPGA: 'ZFLTREAD 5 186' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.428 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 191\n [Z Motor]
17-03-17 17:39:45.428 -07 000000618 INF: FPGA: Recv ZFLTREAD 37311 37306 37306 37309 37309 
17-03-17 17:39:45.438 -07 000000610 INF: FPGA: 'ZFLTREAD 5 191' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.438 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 196\n [Z Motor]
17-03-17 17:39:45.438 -07 000000482 INF: FPGA: Recv ZFLTREAD 37311 37306 37309 37307 37304 
17-03-17 17:39:45.448 -07 000000610 INF: FPGA: 'ZFLTREAD 5 196' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.448 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 201\n [Z Motor]
17-03-17 17:39:45.448 -07 000000448 INF: FPGA: Recv ZFLTREAD 37307 37307 37312 37309 37311 
17-03-17 17:39:45.458 -07 000000610 INF: FPGA: 'ZFLTREAD 5 201' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.458 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 206\n [Z Motor]
17-03-17 17:39:45.458 -07 000000482 INF: FPGA: Recv ZFLTREAD 37303 37307 37306 37311 37304 
17-03-17 17:39:45.468 -07 000000610 INF: FPGA: 'ZFLTREAD 5 206' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.468 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 211\n [Z Motor]
17-03-17 17:39:45.468 -07 000000626 INF: FPGA: Recv ZFLTREAD 37309 37310 37311 37307 37305 
17-03-17 17:39:45.478 -07 000000610 INF: FPGA: 'ZFLTREAD 5 211' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.478 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 216\n [Z Motor]
17-03-17 17:39:45.478 -07 000000482 INF: FPGA: Recv ZFLTREAD 37311 37312 37310 37310 37312 
17-03-17 17:39:45.488 -07 000000610 INF: FPGA: 'ZFLTREAD 5 216' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.488 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 221\n [Z Motor]
17-03-17 17:39:45.488 -07 000000618 INF: FPGA: Recv ZFLTREAD 37309 37310 37312 37315 37312 
17-03-17 17:39:45.498 -07 000000610 INF: FPGA: 'ZFLTREAD 5 221' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.498 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 226\n [Z Motor]
17-03-17 17:39:45.498 -07 000000482 INF: FPGA: Recv ZFLTREAD 37308 37309 37308 37311 37309 
17-03-17 17:39:45.508 -07 000000610 INF: FPGA: 'ZFLTREAD 5 226' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.508 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 231\n [Z Motor]
17-03-17 17:39:45.508 -07 000000608 INF: FPGA: Recv ZFLTREAD 37312 37314 37314 37311 37309 
17-03-17 17:39:45.518 -07 000000610 INF: FPGA: 'ZFLTREAD 5 231' command took 1 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:45.518 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 236\n [Z Motor]
17-03-17 17:39:45.518 -07 000000626 INF: FPGA: Recv ZFLTREAD 37309 37310 37312 37312 37311 
17-03-17 17:39:45.528 -07 000000610 INF: FPGA: 'ZFLTREAD 5 236' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.528 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 241\n [Z Motor]
17-03-17 17:39:45.528 -07 000000608 INF: FPGA: Recv ZFLTREAD 37310 37305 37308 37308 37311 
17-03-17 17:39:45.538 -07 000000610 INF: FPGA: 'ZFLTREAD 5 241' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.538 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 246\n [Z Motor]
17-03-17 17:39:45.538 -07 000000448 INF: FPGA: Recv ZFLTREAD 37310 37308 37307 37309 37307 
17-03-17 17:39:45.548 -07 000000610 INF: FPGA: 'ZFLTREAD 5 246' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.548 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 251\n [Z Motor]
17-03-17 17:39:45.548 -07 000000482 INF: FPGA: Recv ZFLTREAD 37308 37310 37311 37313 37310 
17-03-17 17:39:45.558 -07 000000610 INF: FPGA: 'ZFLTREAD 5 251' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.558 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 256\n [Z Motor]
17-03-17 17:39:45.558 -07 000000448 INF: FPGA: Recv ZFLTREAD 37310 37311 37307 37313 37313 
17-03-17 17:39:45.568 -07 000000610 INF: FPGA: 'ZFLTREAD 5 256' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.568 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 261\n [Z Motor]
17-03-17 17:39:45.568 -07 000000608 INF: FPGA: Recv ZFLTREAD 37311 37309 37312 37310 37311 
17-03-17 17:39:45.578 -07 000000610 INF: FPGA: 'ZFLTREAD 5 261' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.578 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 266\n [Z Motor]
17-03-17 17:39:45.578 -07 000000618 INF: FPGA: Recv ZFLTREAD 37310 37315 37310 37307 37307 
17-03-17 17:39:45.588 -07 000000610 INF: FPGA: 'ZFLTREAD 5 266' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.588 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 271\n [Z Motor]
17-03-17 17:39:45.588 -07 000000626 INF: FPGA: Recv ZFLTREAD 37309 37305 37307 37310 37310 
17-03-17 17:39:45.598 -07 000000610 INF: FPGA: 'ZFLTREAD 5 271' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.598 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 276\n [Z Motor]
17-03-17 17:39:45.598 -07 000000448 INF: FPGA: Recv ZFLTREAD 37306 37304 37304 37307 37308 
17-03-17 17:39:45.608 -07 000000610 INF: FPGA: 'ZFLTREAD 5 276' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.608 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 281\n [Z Motor]
17-03-17 17:39:45.608 -07 000000618 INF: FPGA: Recv ZFLTREAD 37308 37310 37306 37306 37306 
17-03-17 17:39:45.618 -07 000000610 INF: FPGA: 'ZFLTREAD 5 281' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.618 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 286\n [Z Motor]
17-03-17 17:39:45.618 -07 000000608 INF: FPGA: Recv ZFLTREAD 37308 37306 37307 37312 37309 
17-03-17 17:39:45.628 -07 000000610 INF: FPGA: 'ZFLTREAD 5 286' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.628 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 291\n [Z Motor]
17-03-17 17:39:45.628 -07 000000626 INF: FPGA: Recv ZFLTREAD 37306 37310 37308 37313 37308 
17-03-17 17:39:45.638 -07 000000610 INF: FPGA: 'ZFLTREAD 5 291' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.638 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 296\n [Z Motor]
17-03-17 17:39:45.638 -07 000000482 INF: FPGA: Recv ZFLTREAD 37313 37313 37311 37309 37317 
17-03-17 17:39:45.648 -07 000000610 INF: FPGA: 'ZFLTREAD 5 296' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.648 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 301\n [Z Motor]
17-03-17 17:39:45.648 -07 000000482 INF: FPGA: Recv ZFLTREAD 37316 37318 37316 37317 37315 
17-03-17 17:39:45.658 -07 000000610 INF: FPGA: 'ZFLTREAD 5 301' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.658 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 306\n [Z Motor]
17-03-17 17:39:45.658 -07 000000608 INF: FPGA: Recv ZFLTREAD 37311 37312 37316 37314 37316 
17-03-17 17:39:45.668 -07 000000610 INF: FPGA: 'ZFLTREAD 5 306' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.668 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 311\n [Z Motor]
17-03-17 17:39:45.668 -07 000000448 INF: FPGA: Recv ZFLTREAD 37310 37310 37308 37311 37305 
17-03-17 17:39:45.678 -07 000000610 INF: FPGA: 'ZFLTREAD 5 311' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.678 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 316\n [Z Motor]
17-03-17 17:39:45.678 -07 000000618 INF: FPGA: Recv ZFLTREAD 37311 37308 37308 37307 37305 
17-03-17 17:39:45.688 -07 000000610 INF: FPGA: 'ZFLTREAD 5 316' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.688 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 321\n [Z Motor]
17-03-17 17:39:45.688 -07 000000482 INF: FPGA: Recv ZFLTREAD 37308 37307 37303 37309 37306 
17-03-17 17:39:45.698 -07 000000610 INF: FPGA: 'ZFLTREAD 5 321' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.698 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 326\n [Z Motor]
17-03-17 17:39:45.698 -07 000000608 INF: FPGA: Recv ZFLTREAD 37302 37303 37303 37308 37307 
17-03-17 17:39:45.708 -07 000000610 INF: FPGA: 'ZFLTREAD 5 326' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.708 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 331\n [Z Motor]
17-03-17 17:39:45.708 -07 000000448 INF: FPGA: Recv ZFLTREAD 37306 37310 37309 37301 37308 
17-03-17 17:39:45.718 -07 000000610 INF: FPGA: 'ZFLTREAD 5 331' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.718 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 336\n [Z Motor]
17-03-17 17:39:45.718 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37311 37309 37311 37307 
17-03-17 17:39:45.728 -07 000000610 INF: FPGA: 'ZFLTREAD 5 336' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.728 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 341\n [Z Motor]
17-03-17 17:39:45.728 -07 000000618 INF: FPGA: Recv ZFLTREAD 37309 37307 37310 37311 37311 
17-03-17 17:39:45.738 -07 000000610 INF: FPGA: 'ZFLTREAD 5 341' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.738 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 346\n [Z Motor]
17-03-17 17:39:45.738 -07 000000448 INF: FPGA: Recv ZFLTREAD 37308 37311 37309 37309 37309 
17-03-17 17:39:45.748 -07 000000610 INF: FPGA: 'ZFLTREAD 5 346' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.748 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 351\n [Z Motor]
17-03-17 17:39:45.748 -07 000000626 INF: FPGA: Recv ZFLTREAD 37308 37311 37312 37306 37308 
17-03-17 17:39:45.758 -07 000000610 INF: FPGA: 'ZFLTREAD 5 351' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.758 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 356\n [Z Motor]
17-03-17 17:39:45.758 -07 000000448 INF: FPGA: Recv ZFLTREAD 37306 37305 37309 37311 37307 
17-03-17 17:39:45.768 -07 000000610 INF: FPGA: 'ZFLTREAD 5 356' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.768 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 361\n [Z Motor]
17-03-17 17:39:45.768 -07 000000482 INF: FPGA: Recv ZFLTREAD 37310 37307 37309 37306 37307 
17-03-17 17:39:45.778 -07 000000610 INF: FPGA: 'ZFLTREAD 5 361' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.778 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 366\n [Z Motor]
17-03-17 17:39:45.778 -07 000000626 INF: FPGA: Recv ZFLTREAD 37310 37309 37306 37311 37311 
17-03-17 17:39:45.788 -07 000000610 INF: FPGA: 'ZFLTREAD 5 366' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.788 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 371\n [Z Motor]
17-03-17 17:39:45.788 -07 000000482 INF: FPGA: Recv ZFLTREAD 37308 37310 37310 37310 37311 
17-03-17 17:39:45.798 -07 000000610 INF: FPGA: 'ZFLTREAD 5 371' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.798 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 376\n [Z Motor]
17-03-17 17:39:45.798 -07 000000618 INF: FPGA: Recv ZFLTREAD 37313 37311 37312 37314 37312 
17-03-17 17:39:45.808 -07 000000610 INF: FPGA: 'ZFLTREAD 5 376' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.808 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 381\n [Z Motor]
17-03-17 17:39:45.808 -07 000000448 INF: FPGA: Recv ZFLTREAD 37312 37312 37318 37310 37313 
17-03-17 17:39:45.818 -07 000000610 INF: FPGA: 'ZFLTREAD 5 381' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.818 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 386\n [Z Motor]
17-03-17 17:39:45.818 -07 000000618 INF: FPGA: Recv ZFLTREAD 37316 37311 37312 37312 37308 
17-03-17 17:39:45.828 -07 000000610 INF: FPGA: 'ZFLTREAD 5 386' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.828 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 391\n [Z Motor]
17-03-17 17:39:45.828 -07 000000448 INF: FPGA: Recv ZFLTREAD 37315 37308 37305 37311 37313 
17-03-17 17:39:45.838 -07 000000610 INF: FPGA: 'ZFLTREAD 5 391' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.838 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 396\n [Z Motor]
17-03-17 17:39:45.838 -07 000000448 INF: FPGA: Recv ZFLTREAD 37309 37305 37308 37306 37305 
17-03-17 17:39:45.848 -07 000000610 INF: FPGA: 'ZFLTREAD 5 396' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.848 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 401\n [Z Motor]
17-03-17 17:39:45.848 -07 000000448 INF: FPGA: Recv ZFLTREAD 37307 37306 37306 37302 37304 
17-03-17 17:39:45.858 -07 000000610 INF: FPGA: 'ZFLTREAD 5 401' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.858 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 406\n [Z Motor]
17-03-17 17:39:45.858 -07 000000618 INF: FPGA: Recv ZFLTREAD 37305 37307 37303 37312 37306 
17-03-17 17:39:45.868 -07 000000610 INF: FPGA: 'ZFLTREAD 5 406' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.868 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 411\n [Z Motor]
17-03-17 17:39:45.868 -07 000000448 INF: FPGA: Recv ZFLTREAD 37305 37305 37308 37307 37307 
17-03-17 17:39:45.878 -07 000000610 INF: FPGA: 'ZFLTREAD 5 411' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.878 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 416\n [Z Motor]
17-03-17 17:39:45.878 -07 000000608 INF: FPGA: Recv ZFLTREAD 37314 37312 37309 37309 37308 
17-03-17 17:39:45.888 -07 000000610 INF: FPGA: 'ZFLTREAD 5 416' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.888 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 421\n [Z Motor]
17-03-17 17:39:45.888 -07 000000448 INF: FPGA: Recv ZFLTREAD 37311 37312 37313 37314 37311 
17-03-17 17:39:45.898 -07 000000610 INF: FPGA: 'ZFLTREAD 5 421' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.898 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 426\n [Z Motor]
17-03-17 17:39:45.898 -07 000000448 INF: FPGA: Recv ZFLTREAD 37306 37304 37308 37313 37310 
17-03-17 17:39:45.908 -07 000000610 INF: FPGA: 'ZFLTREAD 5 426' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.908 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 431\n [Z Motor]
17-03-17 17:39:45.908 -07 000000626 INF: FPGA: Recv ZFLTREAD 37308 37310 37306 37306 37303 
17-03-17 17:39:45.918 -07 000000610 INF: FPGA: 'ZFLTREAD 5 431' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.918 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 436\n [Z Motor]
17-03-17 17:39:45.918 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37309 37310 37310 37303 
17-03-17 17:39:45.928 -07 000000610 INF: FPGA: 'ZFLTREAD 5 436' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.928 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 441\n [Z Motor]
17-03-17 17:39:45.928 -07 000000608 INF: FPGA: Recv ZFLTREAD 37304 37304 37303 37309 37313 
17-03-17 17:39:45.938 -07 000000610 INF: FPGA: 'ZFLTREAD 5 441' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.938 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 446\n [Z Motor]
17-03-17 17:39:45.938 -07 000000448 INF: FPGA: Recv ZFLTREAD 37310 37308 37304 37310 37307 
17-03-17 17:39:45.948 -07 000000610 INF: FPGA: 'ZFLTREAD 5 446' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.948 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 451\n [Z Motor]
17-03-17 17:39:45.948 -07 000000626 INF: FPGA: Recv ZFLTREAD 37311 37314 37314 37309 37308 
17-03-17 17:39:45.958 -07 000000610 INF: FPGA: 'ZFLTREAD 5 451' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.958 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 456\n [Z Motor]
17-03-17 17:39:45.958 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37311 37315 37313 37314 
17-03-17 17:39:45.968 -07 000000610 INF: FPGA: 'ZFLTREAD 5 456' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.968 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 461\n [Z Motor]
17-03-17 17:39:45.968 -07 000000482 INF: FPGA: Recv ZFLTREAD 37312 37311 37311 37312 37310 
17-03-17 17:39:45.978 -07 000000610 INF: FPGA: 'ZFLTREAD 5 461' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.978 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 466\n [Z Motor]
17-03-17 17:39:45.978 -07 000000626 INF: FPGA: Recv ZFLTREAD 37314 37318 37311 37308 37308 
17-03-17 17:39:45.988 -07 000000610 INF: FPGA: 'ZFLTREAD 5 466' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.988 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 471\n [Z Motor]
17-03-17 17:39:45.988 -07 000000608 INF: FPGA: Recv ZFLTREAD 37312 37306 37308 37311 37311 
17-03-17 17:39:45.998 -07 000000610 INF: FPGA: 'ZFLTREAD 5 471' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:45.998 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 476\n [Z Motor]
17-03-17 17:39:45.998 -07 000000448 INF: FPGA: Recv ZFLTREAD 37309 37301 37306 37309 37309 
17-03-17 17:39:46.008 -07 000000610 INF: FPGA: 'ZFLTREAD 5 476' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.008 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 481\n [Z Motor]
17-03-17 17:39:46.008 -07 000000448 INF: FPGA: Recv ZFLTREAD 37306 37312 37307 37305 37305 
17-03-17 17:39:46.018 -07 000000610 INF: FPGA: 'ZFLTREAD 5 481' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.018 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 486\n [Z Motor]
17-03-17 17:39:46.018 -07 000000618 INF: FPGA: Recv ZFLTREAD 37305 37311 37308 37303 37308 
17-03-17 17:39:46.028 -07 000000610 INF: FPGA: 'ZFLTREAD 5 486' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.028 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 491\n [Z Motor]
17-03-17 17:39:46.028 -07 000000608 INF: FPGA: Recv ZFLTREAD 37308 37312 37304 37307 37310 
17-03-17 17:39:46.038 -07 000000610 INF: FPGA: 'ZFLTREAD 5 491' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.038 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 496\n [Z Motor]
17-03-17 17:39:46.038 -07 000000618 INF: FPGA: Recv ZFLTREAD 37312 37309 37306 37309 37316 
17-03-17 17:39:46.048 -07 000000610 INF: FPGA: 'ZFLTREAD 5 496' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.048 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 501\n [Z Motor]
17-03-17 17:39:46.048 -07 000000608 INF: FPGA: Recv ZFLTREAD 37312 37314 37317 37314 37311 
17-03-17 17:39:46.058 -07 000000610 INF: FPGA: 'ZFLTREAD 5 501' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.058 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 506\n [Z Motor]
17-03-17 17:39:46.058 -07 000000608 INF: FPGA: Recv ZFLTREAD 37312 37313 37314 37314 37314 
17-03-17 17:39:46.068 -07 000000610 INF: FPGA: 'ZFLTREAD 5 506' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.068 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 511\n [Z Motor]
17-03-17 17:39:46.068 -07 000000626 INF: FPGA: Recv ZFLTREAD 37309 37305 37309 37305 37308 
17-03-17 17:39:46.078 -07 000000610 INF: FPGA: 'ZFLTREAD 5 511' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.078 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 516\n [Z Motor]
17-03-17 17:39:46.078 -07 000000448 INF: FPGA: Recv ZFLTREAD 37308 37311 37309 37306 37303 
17-03-17 17:39:46.088 -07 000000610 INF: FPGA: 'ZFLTREAD 5 516' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.088 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 521\n [Z Motor]
17-03-17 17:39:46.088 -07 000000626 INF: FPGA: Recv ZFLTREAD 37308 37310 37310 37311 37312 
17-03-17 17:39:46.098 -07 000000610 INF: FPGA: 'ZFLTREAD 5 521' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.098 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 526\n [Z Motor]
17-03-17 17:39:46.098 -07 000000626 INF: FPGA: Recv ZFLTREAD 37310 37308 37301 37311 37311 
17-03-17 17:39:46.108 -07 000000610 INF: FPGA: 'ZFLTREAD 5 526' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.108 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 531\n [Z Motor]
17-03-17 17:39:46.108 -07 000000618 INF: FPGA: Recv ZFLTREAD 37313 37311 37309 37308 37308 
17-03-17 17:39:46.118 -07 000000610 INF: FPGA: 'ZFLTREAD 5 531' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.118 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 536\n [Z Motor]
17-03-17 17:39:46.118 -07 000000608 INF: FPGA: Recv ZFLTREAD 37306 37314 37315 37312 37308 
17-03-17 17:39:46.128 -07 000000610 INF: FPGA: 'ZFLTREAD 5 536' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.128 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 541\n [Z Motor]
17-03-17 17:39:46.128 -07 000000618 INF: FPGA: Recv ZFLTREAD 37309 37307 37307 37309 37312 
17-03-17 17:39:46.138 -07 000000610 INF: FPGA: 'ZFLTREAD 5 541' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.138 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 546\n [Z Motor]
17-03-17 17:39:46.138 -07 000000626 INF: FPGA: Recv ZFLTREAD 37315 37308 37308 37306 37302 
17-03-17 17:39:46.148 -07 000000610 INF: FPGA: 'ZFLTREAD 5 546' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.148 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 551\n [Z Motor]
17-03-17 17:39:46.148 -07 000000608 INF: FPGA: Recv ZFLTREAD 37307 37308 37307 37310 37309 
17-03-17 17:39:46.158 -07 000000610 INF: FPGA: 'ZFLTREAD 5 551' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.158 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 556\n [Z Motor]
17-03-17 17:39:46.158 -07 000000618 INF: FPGA: Recv ZFLTREAD 37305 37301 37306 37309 37310 
17-03-17 17:39:46.168 -07 000000610 INF: FPGA: 'ZFLTREAD 5 556' command took 1 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:46.168 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 561\n [Z Motor]
17-03-17 17:39:46.168 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37305 37309 37305 37304 
17-03-17 17:39:46.178 -07 000000610 INF: FPGA: 'ZFLTREAD 5 561' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.178 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 566\n [Z Motor]
17-03-17 17:39:46.178 -07 000000618 INF: FPGA: Recv ZFLTREAD 37311 37315 37309 37304 37304 
17-03-17 17:39:46.188 -07 000000610 INF: FPGA: 'ZFLTREAD 5 566' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.188 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 571\n [Z Motor]
17-03-17 17:39:46.188 -07 000000618 INF: FPGA: Recv ZFLTREAD 37305 37309 37311 37311 37313 
17-03-17 17:39:46.198 -07 000000610 INF: FPGA: 'ZFLTREAD 5 571' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.198 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 576\n [Z Motor]
17-03-17 17:39:46.198 -07 000000409 INF: FPGA: Recv ZFLTREAD 37311 37307 37305 37309 37311 
17-03-17 17:39:46.208 -07 000000610 INF: FPGA: 'ZFLTREAD 5 576' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.208 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 581\n [Z Motor]
17-03-17 17:39:46.208 -07 000000608 INF: FPGA: Recv ZFLTREAD 37310 37311 37313 37306 37303 
17-03-17 17:39:46.218 -07 000000610 INF: FPGA: 'ZFLTREAD 5 581' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.218 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 586\n [Z Motor]
17-03-17 17:39:46.218 -07 000000482 INF: FPGA: Recv ZFLTREAD 37302 37309 37312 37313 37307 
17-03-17 17:39:46.228 -07 000000610 INF: FPGA: 'ZFLTREAD 5 586' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.238 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 591\n [Z Motor]
17-03-17 17:39:46.238 -07 000000626 INF: FPGA: Recv ZFLTREAD 37308 37301 37304 37308 37310 
17-03-17 17:39:46.248 -07 000000610 INF: FPGA: 'ZFLTREAD 5 591' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:39:46.248 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 596\n [Z Motor]
17-03-17 17:39:46.248 -07 000000482 INF: FPGA: Recv ZFLTREAD 37310 37307 37303 37304 37302 
17-03-17 17:39:46.258 -07 000000610 INF: FPGA: 'ZFLTREAD 5 596' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.258 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 601\n [Z Motor]
17-03-17 17:39:46.258 -07 000000618 INF: FPGA: Recv ZFLTREAD 37309 37311 37312 37310 37308 
17-03-17 17:39:46.268 -07 000000610 INF: FPGA: 'ZFLTREAD 5 601' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.268 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 606\n [Z Motor]
17-03-17 17:39:46.268 -07 000000626 INF: FPGA: Recv ZFLTREAD 37305 37304 37307 37312 37316 
17-03-17 17:39:46.278 -07 000000610 INF: FPGA: 'ZFLTREAD 5 606' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.278 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 611\n [Z Motor]
17-03-17 17:39:46.278 -07 000000448 INF: FPGA: Recv ZFLTREAD 37310 37307 37308 37305 37306 
17-03-17 17:39:46.288 -07 000000610 INF: FPGA: 'ZFLTREAD 5 611' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.288 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 616\n [Z Motor]
17-03-17 17:39:46.288 -07 000000608 INF: FPGA: Recv ZFLTREAD 37314 37316 37314 37308 37306 
17-03-17 17:39:46.298 -07 000000610 INF: FPGA: 'ZFLTREAD 5 616' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.298 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 621\n [Z Motor]
17-03-17 17:39:46.298 -07 000000618 INF: FPGA: Recv ZFLTREAD 37304 37305 37313 37318 37314 
17-03-17 17:39:46.308 -07 000000610 INF: FPGA: 'ZFLTREAD 5 621' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.308 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 626\n [Z Motor]
17-03-17 17:39:46.308 -07 000000626 INF: FPGA: Recv ZFLTREAD 37311 37305 37305 37307 37311 
17-03-17 17:39:46.318 -07 000000610 INF: FPGA: 'ZFLTREAD 5 626' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.318 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 631\n [Z Motor]
17-03-17 17:39:46.318 -07 000000626 INF: FPGA: Recv ZFLTREAD 37313 37314 37310 37308 37303 
17-03-17 17:39:46.328 -07 000000610 INF: FPGA: 'ZFLTREAD 5 631' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.328 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 636\n [Z Motor]
17-03-17 17:39:46.328 -07 000000448 INF: FPGA: Recv ZFLTREAD 37306 37310 37313 37313 37307 
17-03-17 17:39:46.338 -07 000000610 INF: FPGA: 'ZFLTREAD 5 636' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.338 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 641\n [Z Motor]
17-03-17 17:39:46.338 -07 000000618 INF: FPGA: Recv ZFLTREAD 37304 37300 37303 37310 37310 
17-03-17 17:39:46.348 -07 000000610 INF: FPGA: 'ZFLTREAD 5 641' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.348 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 646\n [Z Motor]
17-03-17 17:39:46.348 -07 000000618 INF: FPGA: Recv ZFLTREAD 37312 37308 37302 37301 37303 
17-03-17 17:39:46.358 -07 000000610 INF: FPGA: 'ZFLTREAD 5 646' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.358 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 651\n [Z Motor]
17-03-17 17:39:46.358 -07 000000482 INF: FPGA: Recv ZFLTREAD 37305 37312 37312 37305 37303 
17-03-17 17:39:46.368 -07 000000610 INF: FPGA: 'ZFLTREAD 5 651' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.368 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 656\n [Z Motor]
17-03-17 17:39:46.368 -07 000000626 INF: FPGA: Recv ZFLTREAD 37304 37307 37307 37309 37316 
17-03-17 17:39:46.378 -07 000000610 INF: FPGA: 'ZFLTREAD 5 656' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.378 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 661\n [Z Motor]
17-03-17 17:39:46.378 -07 000000608 INF: FPGA: Recv ZFLTREAD 37308 37304 37306 37308 37306 
17-03-17 17:39:46.388 -07 000000610 INF: FPGA: 'ZFLTREAD 5 661' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.388 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 666\n [Z Motor]
17-03-17 17:39:46.388 -07 000000482 INF: FPGA: Recv ZFLTREAD 37313 37316 37315 37308 37308 
17-03-17 17:39:46.398 -07 000000610 INF: FPGA: 'ZFLTREAD 5 666' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.398 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 671\n [Z Motor]
17-03-17 17:39:46.398 -07 000000482 INF: FPGA: Recv ZFLTREAD 37309 37311 37312 37317 37313 
17-03-17 17:39:46.408 -07 000000610 INF: FPGA: 'ZFLTREAD 5 671' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.408 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 676\n [Z Motor]
17-03-17 17:39:46.408 -07 000000448 INF: FPGA: Recv ZFLTREAD 37308 37305 37304 37308 37310 
17-03-17 17:39:46.418 -07 000000610 INF: FPGA: 'ZFLTREAD 5 676' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.418 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 681\n [Z Motor]
17-03-17 17:39:46.418 -07 000000482 INF: FPGA: Recv ZFLTREAD 37312 37316 37307 37305 37303 
17-03-17 17:39:46.428 -07 000000610 INF: FPGA: 'ZFLTREAD 5 681' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.428 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 686\n [Z Motor]
17-03-17 17:39:46.428 -07 000000626 INF: FPGA: Recv ZFLTREAD 37308 37309 37310 37313 37308 
17-03-17 17:39:46.438 -07 000000610 INF: FPGA: 'ZFLTREAD 5 686' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.438 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 691\n [Z Motor]
17-03-17 17:39:46.438 -07 000000626 INF: FPGA: Recv ZFLTREAD 37303 37305 37306 37308 37310 
17-03-17 17:39:46.448 -07 000000610 INF: FPGA: 'ZFLTREAD 5 691' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.448 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 696\n [Z Motor]
17-03-17 17:39:46.448 -07 000000482 INF: FPGA: Recv ZFLTREAD 37311 37312 37310 37303 37310 
17-03-17 17:39:46.458 -07 000000610 INF: FPGA: 'ZFLTREAD 5 696' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.458 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 701\n [Z Motor]
17-03-17 17:39:46.458 -07 000000626 INF: FPGA: Recv ZFLTREAD 37315 37309 37314 37313 37307 
17-03-17 17:39:46.468 -07 000000610 INF: FPGA: 'ZFLTREAD 5 701' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.468 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 706\n [Z Motor]
17-03-17 17:39:46.468 -07 000000482 INF: FPGA: Recv ZFLTREAD 37306 37308 37308 37314 37309 
17-03-17 17:39:46.478 -07 000000610 INF: FPGA: 'ZFLTREAD 5 706' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.478 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 711\n [Z Motor]
17-03-17 17:39:46.478 -07 000000626 INF: FPGA: Recv ZFLTREAD 37309 37307 37305 37305 37309 
17-03-17 17:39:46.488 -07 000000610 INF: FPGA: 'ZFLTREAD 5 711' command took 1 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:46.488 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 716\n [Z Motor]
17-03-17 17:39:46.488 -07 000000482 INF: FPGA: Recv ZFLTREAD 37310 37313 37309 37305 37306 
17-03-17 17:39:46.498 -07 000000610 INF: FPGA: 'ZFLTREAD 5 716' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.498 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 721\n [Z Motor]
17-03-17 17:39:46.498 -07 000000541 INF: FPGA: Recv ZFLTREAD 37303 37307 37310 37311 37311 
17-03-17 17:39:46.508 -07 000000610 INF: FPGA: 'ZFLTREAD 5 721' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.508 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 726\n [Z Motor]
17-03-17 17:39:46.508 -07 000000618 INF: FPGA: Recv ZFLTREAD 37306 37305 37302 37308 37309 
17-03-17 17:39:46.518 -07 000000610 INF: FPGA: 'ZFLTREAD 5 726' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.518 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 731\n [Z Motor]
17-03-17 17:39:46.518 -07 000000541 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 17:39:46.518 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 3. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=4, R2=5, Total=9. Bubbles this run: R1=32, R2=39, Total=71. Warn if over 250 bubbles per interval.
17-03-17 17:39:46.518 -07 000000541 INF: FPGA: Recv ZFLTREAD 37308 37313 37308 37304 37303 
17-03-17 17:39:46.528 -07 000000610 INF: FPGA: 'ZFLTREAD 5 731' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.528 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 736\n [Z Motor]
17-03-17 17:39:46.528 -07 000000448 INF: FPGA: Recv ZFLTREAD 37308 37310 37312 37308 37308 
17-03-17 17:39:46.538 -07 000000610 INF: FPGA: 'ZFLTREAD 5 736' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.548 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 741\n [Z Motor]
17-03-17 17:39:46.548 -07 000000608 INF: FPGA: Recv ZFLTREAD 37305 37303 37307 37309 37310 
17-03-17 17:39:46.558 -07 000000610 INF: FPGA: 'ZFLTREAD 5 741' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:39:46.568 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 746\n [Z Motor]
17-03-17 17:39:46.568 -07 000000448 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 3, FrontChillerTemperature: 4.030322,
17-03-17 17:39:46.568 -07 000000626 INF: FPGA: Recv ZFLTREAD 37312 37307 37310 37308 37305 
17-03-17 17:39:46.578 -07 000000610 INF: FPGA: 'ZFLTREAD 5 746' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:39:46.578 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 751\n [Z Motor]
17-03-17 17:39:46.578 -07 000000618 INF: FPGA: Recv ZFLTREAD 37311 37312 37310 37310 37310 
17-03-17 17:39:46.588 -07 000000610 INF: FPGA: 'ZFLTREAD 5 751' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.608 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 756\n [Z Motor]
17-03-17 17:39:46.608 -07 000000482 INF: FPGA: Recv ZFLTREAD 37306 37308 37309 37311 37309 
17-03-17 17:39:46.618 -07 000000610 INF: FPGA: 'ZFLTREAD 5 756' command took 1 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:39:46.638 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 761\n [Z Motor]
17-03-17 17:39:46.638 -07 000000618 INF: FPGA: Recv ZFLTREAD 37307 37307 37309 37304 37310 
17-03-17 17:39:46.648 -07 000000610 INF: FPGA: 'ZFLTREAD 5 761' command took 1 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:39:46.648 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 766\n [Z Motor]
17-03-17 17:39:46.648 -07 000000626 INF: FPGA: Recv ZFLTREAD 37310 37315 37308 37309 37305 
17-03-17 17:39:46.658 -07 000000610 INF: FPGA: 'ZFLTREAD 5 766' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.658 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 771\n [Z Motor]
17-03-17 17:39:46.658 -07 000000448 INF: FPGA: Recv ZFLTREAD 37307 37306 37308 37308 37311 
17-03-17 17:39:46.668 -07 000000610 INF: FPGA: 'ZFLTREAD 5 771' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.668 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 776\n [Z Motor]
17-03-17 17:39:46.668 -07 000000608 INF: FPGA: Recv ZFLTREAD 37310 37305 37305 37310 37311 
17-03-17 17:39:46.678 -07 000000610 INF: FPGA: 'ZFLTREAD 5 776' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.678 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 781\n [Z Motor]
17-03-17 17:39:46.678 -07 000000482 INF: FPGA: Recv ZFLTREAD 37313 37311 37312 37307 37306 
17-03-17 17:39:46.688 -07 000000610 INF: FPGA: 'ZFLTREAD 5 781' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.688 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 786\n [Z Motor]
17-03-17 17:39:46.688 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37312 37315 37313 37310 
17-03-17 17:39:46.698 -07 000000610 INF: FPGA: 'ZFLTREAD 5 786' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.698 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 791\n [Z Motor]
17-03-17 17:39:46.698 -07 000000618 INF: FPGA: Recv ZFLTREAD 37308 37306 37308 37311 37309 
17-03-17 17:39:46.708 -07 000000610 INF: FPGA: 'ZFLTREAD 5 791' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.708 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 796\n [Z Motor]
17-03-17 17:39:46.708 -07 000000448 INF: FPGA: Recv ZFLTREAD 37314 37309 37310 37305 37308 
17-03-17 17:39:46.718 -07 000000610 INF: FPGA: 'ZFLTREAD 5 796' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.718 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 801\n [Z Motor]
17-03-17 17:39:46.718 -07 000000482 INF: FPGA: Recv ZFLTREAD 37311 37310 37306 37311 37309 
17-03-17 17:39:46.728 -07 000000610 INF: FPGA: 'ZFLTREAD 5 801' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.728 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 806\n [Z Motor]
17-03-17 17:39:46.728 -07 000000618 INF: FPGA: Recv ZFLTREAD 37308 37303 37307 37309 37314 
17-03-17 17:39:46.738 -07 000000610 INF: FPGA: 'ZFLTREAD 5 806' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.738 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 811\n [Z Motor]
17-03-17 17:39:46.738 -07 000000626 INF: FPGA: Recv ZFLTREAD 37307 37309 37310 37309 37310 
17-03-17 17:39:46.748 -07 000000610 INF: FPGA: 'ZFLTREAD 5 811' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.748 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 816\n [Z Motor]
17-03-17 17:39:46.748 -07 000000618 INF: FPGA: Recv ZFLTREAD 37310 37315 37312 37308 37307 
17-03-17 17:39:46.758 -07 000000610 INF: FPGA: 'ZFLTREAD 5 816' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.758 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 821\n [Z Motor]
17-03-17 17:39:46.758 -07 000000448 INF: FPGA: Recv ZFLTREAD 37309 37309 37308 37312 37313 
17-03-17 17:39:46.768 -07 000000610 INF: FPGA: 'ZFLTREAD 5 821' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.768 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 826\n [Z Motor]
17-03-17 17:39:46.768 -07 000000618 INF: FPGA: Recv ZFLTREAD 37311 37307 37305 37312 37308 
17-03-17 17:39:46.778 -07 000000610 INF: FPGA: 'ZFLTREAD 5 826' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.778 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 831\n [Z Motor]
17-03-17 17:39:46.778 -07 000000448 INF: FPGA: Recv ZFLTREAD 37308 37308 37307 37308 37306 
17-03-17 17:39:46.788 -07 000000610 INF: FPGA: 'ZFLTREAD 5 831' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.788 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 836\n [Z Motor]
17-03-17 17:39:46.788 -07 000000626 INF: FPGA: Recv ZFLTREAD 37304 37304 37310 37310 37302 
17-03-17 17:39:46.798 -07 000000610 INF: FPGA: 'ZFLTREAD 5 836' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.798 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 841\n [Z Motor]
17-03-17 17:39:46.798 -07 000000482 INF: FPGA: Recv ZFLTREAD 37304 37304 37304 37305 37306 
17-03-17 17:39:46.808 -07 000000610 INF: FPGA: 'ZFLTREAD 5 841' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.808 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 846\n [Z Motor]
17-03-17 17:39:46.808 -07 000000618 INF: FPGA: Recv ZFLTREAD 37308 37306 37303 37304 37305 
17-03-17 17:39:46.818 -07 000000610 INF: FPGA: 'ZFLTREAD 5 846' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.818 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 851\n [Z Motor]
17-03-17 17:39:46.818 -07 000000448 INF: FPGA: Recv ZFLTREAD 37306 37309 37306 37307 37306 
17-03-17 17:39:46.828 -07 000000610 INF: FPGA: 'ZFLTREAD 5 851' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.828 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 856\n [Z Motor]
17-03-17 17:39:46.828 -07 000000608 INF: FPGA: Recv ZFLTREAD 37306 37304 37306 37311 37313 
17-03-17 17:39:46.838 -07 000000610 INF: FPGA: 'ZFLTREAD 5 856' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.838 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 861\n [Z Motor]
17-03-17 17:39:46.838 -07 000000626 INF: FPGA: Recv ZFLTREAD 37307 37308 37309 37312 37306 
17-03-17 17:39:46.848 -07 000000610 INF: FPGA: 'ZFLTREAD 5 861' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.848 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 866\n [Z Motor]
17-03-17 17:39:46.848 -07 000000618 INF: FPGA: Recv ZFLTREAD 37313 37317 37313 37311 37308 
17-03-17 17:39:46.858 -07 000000610 INF: FPGA: 'ZFLTREAD 5 866' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.858 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 871\n [Z Motor]
17-03-17 17:39:46.858 -07 000000626 INF: FPGA: Recv ZFLTREAD 37313 37313 37309 37314 37311 
17-03-17 17:39:46.868 -07 000000610 INF: FPGA: 'ZFLTREAD 5 871' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.888 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 876\n [Z Motor]
17-03-17 17:39:46.888 -07 000000448 INF: FPGA: Recv ZFLTREAD 37307 37308 37306 37309 37310 
17-03-17 17:39:46.898 -07 000000610 INF: FPGA: 'ZFLTREAD 5 876' command took 1 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:39:46.918 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 881\n [Z Motor]
17-03-17 17:39:46.918 -07 000000482 INF: FPGA: Recv ZFLTREAD 37307 37308 37303 37300 37303 
17-03-17 17:39:46.928 -07 000000610 INF: FPGA: 'ZFLTREAD 5 881' command took 1 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 17:39:46.928 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 886\n [Z Motor]
17-03-17 17:39:46.928 -07 000000618 INF: FPGA: Recv ZFLTREAD 37305 37304 37307 37310 37307 
17-03-17 17:39:46.938 -07 000000610 INF: FPGA: 'ZFLTREAD 5 886' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.948 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 891\n [Z Motor]
17-03-17 17:39:46.948 -07 000000482 INF: FPGA: Recv ZFLTREAD 37305 37304 37307 37310 37309 
17-03-17 17:39:46.958 -07 000000610 INF: FPGA: 'ZFLTREAD 5 891' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 17:39:46.958 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 896\n [Z Motor]
17-03-17 17:39:46.958 -07 000000482 INF: FPGA: Recv ZFLTREAD 37310 37311 37311 37307 37310 
17-03-17 17:39:46.968 -07 000000610 INF: FPGA: 'ZFLTREAD 5 896' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.968 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 901\n [Z Motor]
17-03-17 17:39:46.968 -07 000000626 INF: FPGA: Recv ZFLTREAD 37311 37312 37315 37311 37311 
17-03-17 17:39:46.978 -07 000000610 INF: FPGA: 'ZFLTREAD 5 901' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.978 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 906\n [Z Motor]
17-03-17 17:39:46.978 -07 000000448 INF: FPGA: Recv ZFLTREAD 37312 37308 37311 37316 37314 
17-03-17 17:39:46.988 -07 000000610 INF: FPGA: 'ZFLTREAD 5 906' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.988 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 911\n [Z Motor]
17-03-17 17:39:46.988 -07 000000626 INF: FPGA: Recv ZFLTREAD 37313 37308 37305 37312 37311 
17-03-17 17:39:46.998 -07 000000610 INF: FPGA: 'ZFLTREAD 5 911' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:46.998 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 916\n [Z Motor]
17-03-17 17:39:46.998 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37310 37310 37310 37305 
17-03-17 17:39:47.008 -07 000000610 INF: FPGA: 'ZFLTREAD 5 916' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.008 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 921\n [Z Motor]
17-03-17 17:39:47.008 -07 000000448 INF: FPGA: Recv ZFLTREAD 37301 37306 37305 37304 37308 
17-03-17 17:39:47.018 -07 000000610 INF: FPGA: 'ZFLTREAD 5 921' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.018 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 926\n [Z Motor]
17-03-17 17:39:47.018 -07 000000448 INF: FPGA: Recv ZFLTREAD 37307 37304 37302 37305 37307 
17-03-17 17:39:47.028 -07 000000610 INF: FPGA: 'ZFLTREAD 5 926' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.028 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 931\n [Z Motor]
17-03-17 17:39:47.028 -07 000000448 INF: FPGA: Recv ZFLTREAD 37308 37306 37309 37305 37307 
17-03-17 17:39:47.038 -07 000000610 INF: FPGA: 'ZFLTREAD 5 931' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.038 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 936\n [Z Motor]
17-03-17 17:39:47.038 -07 000000448 INF: FPGA: Recv ZFLTREAD 37307 37310 37307 37313 37310 
17-03-17 17:39:47.048 -07 000000610 INF: FPGA: 'ZFLTREAD 5 936' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.048 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 941\n [Z Motor]
17-03-17 17:39:47.048 -07 000000482 INF: FPGA: Recv ZFLTREAD 37307 37307 37309 37312 37316 
17-03-17 17:39:47.058 -07 000000610 INF: FPGA: 'ZFLTREAD 5 941' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.058 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 946\n [Z Motor]
17-03-17 17:39:47.058 -07 000000626 INF: FPGA: Recv ZFLTREAD 37310 37315 37312 37312 37310 
17-03-17 17:39:47.068 -07 000000610 INF: FPGA: 'ZFLTREAD 5 946' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.068 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 951\n [Z Motor]
17-03-17 17:39:47.068 -07 000000448 INF: FPGA: Recv ZFLTREAD 37311 37312 37313 37308 37309 
17-03-17 17:39:47.078 -07 000000610 INF: FPGA: 'ZFLTREAD 5 951' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.078 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 956\n [Z Motor]
17-03-17 17:39:47.078 -07 000000448 INF: FPGA: Recv ZFLTREAD 37307 37306 37308 37310 37311 
17-03-17 17:39:47.088 -07 000000610 INF: FPGA: 'ZFLTREAD 5 956' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.088 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 961\n [Z Motor]
17-03-17 17:39:47.088 -07 000000448 INF: FPGA: Recv ZFLTREAD 37307 37307 37306 37303 37304 
17-03-17 17:39:47.098 -07 000000610 INF: FPGA: 'ZFLTREAD 5 961' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.098 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 966\n [Z Motor]
17-03-17 17:39:47.098 -07 000000626 INF: FPGA: Recv ZFLTREAD 37306 37310 37310 37304 37305 
17-03-17 17:39:47.108 -07 000000610 INF: FPGA: 'ZFLTREAD 5 966' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.108 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 971\n [Z Motor]
17-03-17 17:39:47.108 -07 000000618 INF: FPGA: Recv ZFLTREAD 37303 37304 37308 37308 37310 
17-03-17 17:39:47.118 -07 000000610 INF: FPGA: 'ZFLTREAD 5 971' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.118 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 976\n [Z Motor]
17-03-17 17:39:47.118 -07 000000618 INF: FPGA: Recv ZFLTREAD 37311 37307 37307 37308 37308 
17-03-17 17:39:47.128 -07 000000610 INF: FPGA: 'ZFLTREAD 5 976' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.128 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 981\n [Z Motor]
17-03-17 17:39:47.128 -07 000000448 INF: FPGA: Recv ZFLTREAD 37313 37309 37307 37311 37309 
17-03-17 17:39:47.138 -07 000000610 INF: FPGA: 'ZFLTREAD 5 981' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.138 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 986\n [Z Motor]
17-03-17 17:39:47.138 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37312 37312 37312 37311 
17-03-17 17:39:47.148 -07 000000610 INF: FPGA: 'ZFLTREAD 5 986' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.148 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 991\n [Z Motor]
17-03-17 17:39:47.148 -07 000000482 INF: FPGA: Recv ZFLTREAD 37309 37311 37308 37306 37310 
17-03-17 17:39:47.158 -07 000000610 INF: FPGA: 'ZFLTREAD 5 991' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.158 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 996\n [Z Motor]
17-03-17 17:39:47.158 -07 000000448 INF: FPGA: Recv ZFLTREAD 37311 37310 37311 37306 37308 
17-03-17 17:39:47.168 -07 000000610 INF: FPGA: 'ZFLTREAD 5 996' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.168 -07 000000610 INF: Z Motor: Read 1000 samples from flight recorder after 2114 ms
17-03-17 17:39:47.168 -07 000000610 INF: Z Motor: Z Settling Time Test: Commanded Z = -180.0 um, Read 1000 ADC samples: Avg = 37239 (-179.6 cal um), Error = 0.4 cal um, Median = 37309 (-180.0 cal um), StdDev = 492 (-56.5 cal um), Range = 4704 (-29.5 cal um), Min = 32639 (-150.0 cal um), Max = 37343 (-180.2 cal um), Pos Noise = 104 (-59.0 cal um), Neg Noise = 4600 (-30.1 cal um)
17-03-17 17:39:47.168 -07 000000626 INF: FPGA: Xmit ZDACW 32768\n [Z Motor]
17-03-17 17:39:47.178 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 17:39:47.178 -07 000000626 INF: FPGA: 'ZDACW 32768' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 17:39:47.178 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:47.178 -07 000000618 INF: FPGA: Recv ZDACR 32768
17-03-17 17:39:47.188 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:47.188 -07 000000610 INF: WaitCommand(1000) start
17-03-17 17:39:48.198 -07 000000610 INF: WaitCommand(1000) end
17-03-17 17:39:48.198 -07 000000610 INF: Z Motor: Arming flight recorder capture 1000 samples every 1000 uS starting 0 uS after moving ZMotor
17-03-17 17:39:48.198 -07 000000610 INF: FPGA: Xmit ZFLTACQUIRE 1 1000 1000 0\n [Z Motor]
17-03-17 17:39:48.198 -07 000000608 INF: FPGA: Recv ZFLTACQUIRE
17-03-17 17:39:48.208 -07 000000610 INF: FPGA: 'ZFLTACQUIRE 1 1000 1000 0' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 17:39:48.208 -07 000000610 INF: FPGA: Xmit ZDACW 39321\n [Z Motor]
17-03-17 17:39:48.208 -07 000000448 INF: FPGA: Recv ZDACW
17-03-17 17:39:48.218 -07 000000610 INF: FPGA: 'ZDACW 39321' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 17:39:48.218 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 17:39:48.218 -07 000000626 INF: FPGA: Recv ZDACR 39321
17-03-17 17:39:48.228 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:48.228 -07 000000448 INF: Z Motor: Waiting for flight recorder to capture 1000 samples every 1000 uS starting 0 uS after moving ZMotor
17-03-17 17:39:48.228 -07 000000448 INF: FPGA: Xmit ZFLTWAIT\n [Z Motor]
17-03-17 17:39:49.208 -07 000000608 INF: FPGA: Recv ZFLTWAIT
17-03-17 17:39:49.208 -07 000000448 INF: FPGA: 'ZFLTWAIT' command took 0 ms to send, 973 ms to get response, and 981 ms overall
17-03-17 17:39:49.208 -07 000000448 INF: Z Motor: Flight recorder finished capturing 1000 samples 981 ms after starting to wait
17-03-17 17:39:49.208 -07 000000610 INF: Z Motor: Reading flight recorder data: 1000 samples every 1000 uS starting 0 uS after starting to move ZMotor
17-03-17 17:39:49.208 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 1\n [Z Motor]
17-03-17 17:39:49.218 -07 000000608 INF: FPGA: Recv ZFLTREAD 32640 32636 32647 32685 32757 
17-03-17 17:39:49.218 -07 000000610 INF: FPGA: 'ZFLTREAD 5 1' command took 0 ms to send, 4 ms to get response, and 7 ms overall
17-03-17 17:39:49.218 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 6\n [Z Motor]
17-03-17 17:39:49.228 -07 000000608 INF: FPGA: Recv ZFLTREAD 32874 33012 33199 33413 33606 
17-03-17 17:39:49.228 -07 000000610 INF: FPGA: 'ZFLTREAD 5 6' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 17:39:49.228 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 11\n [Z Motor]
17-03-17 17:39:49.228 -07 000000482 INF: FPGA: Recv ZFLTREAD 33845 34105 34360 34582 34833 
17-03-17 17:39:49.238 -07 000000610 INF: FPGA: 'ZFLTREAD 5 11' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.238 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 16\n [Z Motor]
17-03-17 17:39:49.238 -07 000000618 INF: FPGA: Recv ZFLTREAD 35073 35268 35475 35678 35866 
17-03-17 17:39:49.248 -07 000000610 INF: FPGA: 'ZFLTREAD 5 16' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.248 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 21\n [Z Motor]
17-03-17 17:39:49.248 -07 000000608 INF: FPGA: Recv ZFLTREAD 36021 36175 36314 36426 36539 
17-03-17 17:39:49.258 -07 000000610 INF: FPGA: 'ZFLTREAD 5 21' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.258 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 26\n [Z Motor]
17-03-17 17:39:49.258 -07 000000482 INF: FPGA: Recv ZFLTREAD 36631 36721 36797 36871 36933 
17-03-17 17:39:49.268 -07 000000610 INF: FPGA: 'ZFLTREAD 5 26' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.268 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 31\n [Z Motor]
17-03-17 17:39:49.268 -07 000000608 INF: FPGA: Recv ZFLTREAD 36990 37028 37067 37100 37130 
17-03-17 17:39:49.278 -07 000000610 INF: FPGA: 'ZFLTREAD 5 31' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.278 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 36\n [Z Motor]
17-03-17 17:39:49.278 -07 000000626 INF: FPGA: Recv ZFLTREAD 37165 37186 37209 37225 37235 
17-03-17 17:39:49.288 -07 000000610 INF: FPGA: 'ZFLTREAD 5 36' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.288 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 41\n [Z Motor]
17-03-17 17:39:49.288 -07 000000448 INF: FPGA: Recv ZFLTREAD 37245 37255 37270 37279 37284 
17-03-17 17:39:49.298 -07 000000610 INF: FPGA: 'ZFLTREAD 5 41' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.298 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 46\n [Z Motor]
17-03-17 17:39:49.298 -07 000000482 INF: FPGA: Recv ZFLTREAD 37290 37292 37296 37301 37306 
17-03-17 17:39:49.308 -07 000000610 INF: FPGA: 'ZFLTREAD 5 46' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.308 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 51\n [Z Motor]
17-03-17 17:39:49.308 -07 000000618 INF: FPGA: Recv ZFLTREAD 37312 37312 37312 37312 37314 
17-03-17 17:39:49.318 -07 000000610 INF: FPGA: 'ZFLTREAD 5 51' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.318 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 56\n [Z Motor]
17-03-17 17:39:49.318 -07 000000626 INF: FPGA: Recv ZFLTREAD 37315 37317 37322 37326 37321 
17-03-17 17:39:49.328 -07 000000610 INF: FPGA: 'ZFLTREAD 5 56' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.328 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 61\n [Z Motor]
17-03-17 17:39:49.328 -07 000000482 INF: FPGA: Recv ZFLTREAD 37317 37318 37320 37320 37323 
17-03-17 17:39:49.338 -07 000000610 INF: FPGA: 'ZFLTREAD 5 61' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.338 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 66\n [Z Motor]
17-03-17 17:39:49.338 -07 000000448 INF: FPGA: Recv ZFLTREAD 37323 37323 37319 37319 37314 
17-03-17 17:39:49.348 -07 000000610 INF: FPGA: 'ZFLTREAD 5 66' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.348 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 71\n [Z Motor]
17-03-17 17:39:49.348 -07 000000608 INF: FPGA: Recv ZFLTREAD 37318 37318 37325 37319 37315 
17-03-17 17:39:49.358 -07 000000610 INF: FPGA: 'ZFLTREAD 5 71' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.358 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 76\n [Z Motor]
17-03-17 17:39:49.358 -07 000000618 INF: FPGA: Recv ZFLTREAD 37312 37313 37311 37315 37314 
17-03-17 17:39:49.368 -07 000000610 INF: FPGA: 'ZFLTREAD 5 76' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.368 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 81\n [Z Motor]
17-03-17 17:39:49.368 -07 000000482 INF: FPGA: Recv ZFLTREAD 37313 37310 37309 37310 37310 
17-03-17 17:39:49.378 -07 000000610 INF: FPGA: 'ZFLTREAD 5 81' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.378 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 86\n [Z Motor]
17-03-17 17:39:49.378 -07 000000482 INF: FPGA: Recv ZFLTREAD 37309 37314 37315 37313 37310 
17-03-17 17:39:49.388 -07 000000610 INF: FPGA: 'ZFLTREAD 5 86' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.388 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 91\n [Z Motor]
17-03-17 17:39:49.398 -07 000000482 INF: FPGA: Recv ZFLTREAD 37308 37308 37311 37311 37313 
17-03-17 17:39:49.398 -07 000000610 INF: FPGA: 'ZFLTREAD 5 91' command took 0 ms to send, 2 ms to get response, and 6 ms overall
17-03-17 17:39:49.398 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 96\n [Z Motor]
17-03-17 17:39:49.398 -07 000000618 INF: FPGA: Recv ZFLTREAD 37313 37311 37312 37311 37311 
17-03-17 17:39:49.408 -07 000000610 INF: FPGA: 'ZFLTREAD 5 96' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 17:39:49.408 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 101\n [Z Motor]
17-03-17 17:39:49.408 -07 000000608 INF: FPGA: Recv ZFLTREAD 37315 37318 37311 37310 37311 
17-03-17 17:39:49.418 -07 000000610 INF: FPGA: 'ZFLTREAD 5 101' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.418 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 106\n [Z Motor]
17-03-17 17:39:49.418 -07 000000626 INF: FPGA: Recv ZFLTREAD 37310 37312 37312 37315 37310 
17-03-17 17:39:49.428 -07 000000610 INF: FPGA: 'ZFLTREAD 5 106' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.428 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 111\n [Z Motor]
17-03-17 17:39:49.428 -07 000000482 INF: FPGA: Recv ZFLTREAD 37309 37310 37310 37307 37316 
17-03-17 17:39:49.438 -07 000000610 INF: FPGA: 'ZFLTREAD 5 111' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.438 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 116\n [Z Motor]
17-03-17 17:39:49.438 -07 000000448 INF: FPGA: Recv ZFLTREAD 37315 37312 37309 37307 37307 
17-03-17 17:39:49.448 -07 000000610 INF: FPGA: 'ZFLTREAD 5 116' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.448 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 121\n [Z Motor]
17-03-17 17:39:49.448 -07 000000626 INF: FPGA: Recv ZFLTREAD 37308 37309 37312 37312 37307 
17-03-17 17:39:49.458 -07 000000610 INF: FPGA: 'ZFLTREAD 5 121' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.458 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 126\n [Z Motor]
17-03-17 17:39:49.458 -07 000000448 INF: FPGA: Recv ZFLTREAD 37309 37306 37310 37309 37310 
17-03-17 17:39:49.468 -07 000000610 INF: FPGA: 'ZFLTREAD 5 126' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.468 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 131\n [Z Motor]
17-03-17 17:39:49.468 -07 000000448 INF: FPGA: Recv ZFLTREAD 37312 37309 37307 37309 37310 
17-03-17 17:39:49.478 -07 000000610 INF: FPGA: 'ZFLTREAD 5 131' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.478 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 136\n [Z Motor]
17-03-17 17:39:49.478 -07 000000618 INF: FPGA: Recv ZFLTREAD 37307 37310 37314 37310 37308 
17-03-17 17:39:49.488 -07 000000610 INF: FPGA: 'ZFLTREAD 5 136' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.488 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 141\n [Z Motor]
17-03-17 17:39:49.488 -07 000000608 INF: FPGA: Recv ZFLTREAD 37305 37308 37312 37308 37313 
17-03-17 17:39:49.498 -07 000000610 INF: FPGA: 'ZFLTREAD 5 141' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.498 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 146\n [Z Motor]
17-03-17 17:39:49.498 -07 000000618 INF: FPGA: Recv ZFLTREAD 37310 37312 37309 37313 37311 
17-03-17 17:39:49.508 -07 000000610 INF: FPGA: 'ZFLTREAD 5 146' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.508 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 151\n [Z Motor]
17-03-17 17:39:49.508 -07 000000626 INF: FPGA: Recv ZFLTREAD 37310 37308 37312 37312 37308 
17-03-17 17:39:49.518 -07 000000610 INF: FPGA: 'ZFLTREAD 5 151' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.518 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 156\n [Z Motor]
17-03-17 17:39:49.518 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37311 37312 37308 37311 
17-03-17 17:39:49.528 -07 000000610 INF: FPGA: 'ZFLTREAD 5 156' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.528 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 161\n [Z Motor]
17-03-17 17:39:49.528 -07 000000482 INF: FPGA: Recv ZFLTREAD 37308 37309 37309 37312 37310 
17-03-17 17:39:49.538 -07 000000610 INF: FPGA: 'ZFLTREAD 5 161' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.538 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 166\n [Z Motor]
17-03-17 17:39:49.538 -07 000000448 INF: FPGA: Recv ZFLTREAD 37315 37306 37312 37307 37306 
17-03-17 17:39:49.548 -07 000000610 INF: FPGA: 'ZFLTREAD 5 166' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.548 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 171\n [Z Motor]
17-03-17 17:39:49.548 -07 000000448 INF: FPGA: Recv ZFLTREAD 37310 37310 37306 37311 37309 
17-03-17 17:39:49.558 -07 000000610 INF: FPGA: 'ZFLTREAD 5 171' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.558 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 176\n [Z Motor]
17-03-17 17:39:49.558 -07 000000626 INF: FPGA: Recv ZFLTREAD 37308 37307 37308 37310 37312 
17-03-17 17:39:49.568 -07 000000610 INF: FPGA: 'ZFLTREAD 5 176' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.568 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 181\n [Z Motor]
17-03-17 17:39:49.568 -07 000000448 INF: FPGA: Recv ZFLTREAD 37312 37310 37310 37304 37309 
17-03-17 17:39:49.578 -07 000000610 INF: FPGA: 'ZFLTREAD 5 181' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.578 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 186\n [Z Motor]
17-03-17 17:39:49.578 -07 000000482 INF: FPGA: Recv ZFLTREAD 37310 37310 37311 37313 37309 
17-03-17 17:39:49.588 -07 000000610 INF: FPGA: 'ZFLTREAD 5 186' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.588 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 191\n [Z Motor]
17-03-17 17:39:49.588 -07 000000475 INF: FPGA: Recv ZFLTREAD 37308 37305 37308 37308 37309 
17-03-17 17:39:49.598 -07 000000610 INF: FPGA: 'ZFLTREAD 5 191' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.598 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 196\n [Z Motor]
17-03-17 17:39:49.598 -07 000000631 INF: FPGA: Recv ZFLTREAD 37314 37311 37307 37306 37308 
17-03-17 17:39:49.608 -07 000000610 INF: FPGA: 'ZFLTREAD 5 196' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.608 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 201\n [Z Motor]
17-03-17 17:39:49.608 -07 000000618 INF: FPGA: Recv ZFLTREAD 37311 37310 37315 37310 37309 
17-03-17 17:39:49.618 -07 000000610 INF: FPGA: 'ZFLTREAD 5 201' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.618 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 206\n [Z Motor]
17-03-17 17:39:49.618 -07 000000631 INF: FPGA: Recv ZFLTREAD 37304 37308 37308 37312 37309 
17-03-17 17:39:49.628 -07 000000610 INF: FPGA: 'ZFLTREAD 5 206' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.628 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 211\n [Z Motor]
17-03-17 17:39:49.628 -07 000000608 INF: FPGA: Recv ZFLTREAD 37311 37306 37304 37304 37303 
17-03-17 17:39:49.638 -07 000000610 INF: FPGA: 'ZFLTREAD 5 211' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.638 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 216\n [Z Motor]
17-03-17 17:39:49.638 -07 000000608 INF: FPGA: Recv ZFLTREAD 37311 37311 37313 37309 37310 
17-03-17 17:39:49.648 -07 000000610 INF: FPGA: 'ZFLTREAD 5 216' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.648 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 221\n [Z Motor]
17-03-17 17:39:49.648 -07 000000482 INF: FPGA: Recv ZFLTREAD 37309 37314 37315 37316 37317 
17-03-17 17:39:49.658 -07 000000610 INF: FPGA: 'ZFLTREAD 5 221' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.658 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 226\n [Z Motor]
17-03-17 17:39:49.658 -07 000000618 INF: FPGA: Recv ZFLTREAD 37313 37307 37310 37312 37316 
17-03-17 17:39:49.668 -07 000000610 INF: FPGA: 'ZFLTREAD 5 226' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.668 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 231\n [Z Motor]
17-03-17 17:39:49.668 -07 000000608 INF: FPGA: Recv ZFLTREAD 37315 37310 37313 37309 37309 
17-03-17 17:39:49.678 -07 000000610 INF: FPGA: 'ZFLTREAD 5 231' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.678 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 236\n [Z Motor]
17-03-17 17:39:49.678 -07 000000618 INF: FPGA: Recv ZFLTREAD 37302 37311 37312 37313 37305 
17-03-17 17:39:49.688 -07 000000610 INF: FPGA: 'ZFLTREAD 5 236' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.688 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 241\n [Z Motor]
17-03-17 17:39:49.688 -07 000000608 INF: FPGA: Recv ZFLTREAD 37304 37304 37309 37307 37308 
17-03-17 17:39:49.698 -07 000000610 INF: FPGA: 'ZFLTREAD 5 241' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.698 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 246\n [Z Motor]
17-03-17 17:39:49.698 -07 000000631 INF: FPGA: Recv ZFLTREAD 37309 37311 37301 37305 37307 
17-03-17 17:39:49.708 -07 000000610 INF: FPGA: 'ZFLTREAD 5 246' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.708 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 251\n [Z Motor]
17-03-17 17:39:49.708 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37309 37308 37308 37305 
17-03-17 17:39:49.718 -07 000000610 INF: FPGA: 'ZFLTREAD 5 251' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.718 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 256\n [Z Motor]
17-03-17 17:39:49.718 -07 000000631 INF: FPGA: Recv ZFLTREAD 37300 37302 37309 37313 37311 
17-03-17 17:39:49.728 -07 000000610 INF: FPGA: 'ZFLTREAD 5 256' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.728 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 261\n [Z Motor]
17-03-17 17:39:49.728 -07 000000475 INF: FPGA: Recv ZFLTREAD 37306 37304 37306 37304 37310 
17-03-17 17:39:49.738 -07 000000610 INF: FPGA: 'ZFLTREAD 5 261' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.738 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 266\n [Z Motor]
17-03-17 17:39:49.738 -07 000000482 INF: FPGA: Recv ZFLTREAD 37310 37309 37310 37309 37308 
17-03-17 17:39:49.748 -07 000000610 INF: FPGA: 'ZFLTREAD 5 266' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.748 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 271\n [Z Motor]
17-03-17 17:39:49.748 -07 000000608 INF: FPGA: Recv ZFLTREAD 37308 37310 37315 37312 37312 
17-03-17 17:39:49.758 -07 000000610 INF: FPGA: 'ZFLTREAD 5 271' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.758 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 276\n [Z Motor]
17-03-17 17:39:49.758 -07 000000631 INF: FPGA: Recv ZFLTREAD 37310 37311 37306 37309 37314 
17-03-17 17:39:49.768 -07 000000610 INF: FPGA: 'ZFLTREAD 5 276' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.768 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 281\n [Z Motor]
17-03-17 17:39:49.768 -07 000000631 INF: FPGA: Recv ZFLTREAD 37313 37307 37308 37307 37308 
17-03-17 17:39:49.778 -07 000000610 INF: FPGA: 'ZFLTREAD 5 281' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.778 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 286\n [Z Motor]
17-03-17 17:39:49.778 -07 000000631 INF: FPGA: Recv ZFLTREAD 37309 37307 37310 37310 37304 
17-03-17 17:39:49.788 -07 000000610 INF: FPGA: 'ZFLTREAD 5 286' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.788 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 291\n [Z Motor]
17-03-17 17:39:49.788 -07 000000631 INF: FPGA: Recv ZFLTREAD 37303 37305 37307 37310 37310 
17-03-17 17:39:49.798 -07 000000610 INF: FPGA: 'ZFLTREAD 5 291' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.798 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 296\n [Z Motor]
17-03-17 17:39:49.798 -07 000000631 INF: FPGA: Recv ZFLTREAD 37308 37309 37307 37302 37308 
17-03-17 17:39:49.808 -07 000000610 INF: FPGA: 'ZFLTREAD 5 296' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.808 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 301\n [Z Motor]
17-03-17 17:39:49.808 -07 000000475 INF: FPGA: Recv ZFLTREAD 37308 37313 37308 37306 37310 
17-03-17 17:39:49.818 -07 000000610 INF: FPGA: 'ZFLTREAD 5 301' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.818 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 306\n [Z Motor]
17-03-17 17:39:49.818 -07 000000475 INF: FPGA: Recv ZFLTREAD 37308 37306 37309 37314 37313 
17-03-17 17:39:49.828 -07 000000610 INF: FPGA: 'ZFLTREAD 5 306' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.828 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 311\n [Z Motor]
17-03-17 17:39:49.828 -07 000000631 INF: FPGA: Recv ZFLTREAD 37307 37307 37309 37311 37308 
17-03-17 17:39:49.838 -07 000000610 INF: FPGA: 'ZFLTREAD 5 311' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.838 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 316\n [Z Motor]
17-03-17 17:39:49.838 -07 000000631 INF: FPGA: Recv ZFLTREAD 37313 37311 37313 37307 37307 
17-03-17 17:39:49.848 -07 000000610 INF: FPGA: 'ZFLTREAD 5 316' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.848 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 321\n [Z Motor]
17-03-17 17:39:49.848 -07 000000475 INF: FPGA: Recv ZFLTREAD 37304 37310 37310 37309 37307 
17-03-17 17:39:49.858 -07 000000610 INF: FPGA: 'ZFLTREAD 5 321' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.858 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 326\n [Z Motor]
17-03-17 17:39:49.858 -07 000000482 INF: FPGA: Recv ZFLTREAD 37308 37305 37307 37303 37309 
17-03-17 17:39:49.868 -07 000000610 INF: FPGA: 'ZFLTREAD 5 326' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.868 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 331\n [Z Motor]
17-03-17 17:39:49.868 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37308 37302 37303 37303 
17-03-17 17:39:49.878 -07 000000610 INF: FPGA: 'ZFLTREAD 5 331' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.878 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 336\n [Z Motor]
17-03-17 17:39:49.878 -07 000000618 INF: FPGA: Recv ZFLTREAD 37304 37305 37309 37309 37308 
17-03-17 17:39:49.888 -07 000000610 INF: FPGA: 'ZFLTREAD 5 336' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.888 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 341\n [Z Motor]
17-03-17 17:39:49.888 -07 000000475 INF: FPGA: Recv ZFLTREAD 37303 37308 37308 37308 37310 
17-03-17 17:39:49.898 -07 000000610 INF: FPGA: 'ZFLTREAD 5 341' command took 2 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.898 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 346\n [Z Motor]
17-03-17 17:39:49.898 -07 000000486 INF: FPGA: Recv ZFLTREAD 37312 37311 37309 37311 37312 
17-03-17 17:39:49.908 -07 000000610 INF: FPGA: 'ZFLTREAD 5 346' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.908 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 351\n [Z Motor]
17-03-17 17:39:49.908 -07 000000482 INF: FPGA: Recv ZFLTREAD 37315 37311 37314 37312 37309 
17-03-17 17:39:49.918 -07 000000610 INF: FPGA: 'ZFLTREAD 5 351' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.918 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 356\n [Z Motor]
17-03-17 17:39:49.918 -07 000000486 INF: FPGA: Recv ZFLTREAD 37308 37313 37311 37314 37308 
17-03-17 17:39:49.928 -07 000000610 INF: FPGA: 'ZFLTREAD 5 356' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.928 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 361\n [Z Motor]
17-03-17 17:39:49.928 -07 000000618 INF: FPGA: Recv ZFLTREAD 37308 37306 37305 37306 37309 
17-03-17 17:39:49.938 -07 000000610 INF: FPGA: 'ZFLTREAD 5 361' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.938 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 366\n [Z Motor]
17-03-17 17:39:49.938 -07 000000608 INF: FPGA: Recv ZFLTREAD 37308 37309 37306 37305 37308 
17-03-17 17:39:49.948 -07 000000610 INF: FPGA: 'ZFLTREAD 5 366' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.948 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 371\n [Z Motor]
17-03-17 17:39:49.948 -07 000000482 INF: FPGA: Recv ZFLTREAD 37310 37308 37312 37312 37312 
17-03-17 17:39:49.958 -07 000000610 INF: FPGA: 'ZFLTREAD 5 371' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.958 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 376\n [Z Motor]
17-03-17 17:39:49.958 -07 000000631 INF: FPGA: Recv ZFLTREAD 37308 37305 37311 37311 37312 
17-03-17 17:39:49.968 -07 000000610 INF: FPGA: 'ZFLTREAD 5 376' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.968 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 381\n [Z Motor]
17-03-17 17:39:49.968 -07 000000608 INF: FPGA: Recv ZFLTREAD 37312 37311 37309 37307 37310 
17-03-17 17:39:49.978 -07 000000610 INF: FPGA: 'ZFLTREAD 5 381' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.978 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 386\n [Z Motor]
17-03-17 17:39:49.978 -07 000000482 INF: FPGA: Recv ZFLTREAD 37312 37311 37314 37316 37315 
17-03-17 17:39:49.988 -07 000000610 INF: FPGA: 'ZFLTREAD 5 386' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.988 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 391\n [Z Motor]
17-03-17 17:39:49.988 -07 000000475 INF: FPGA: Recv ZFLTREAD 37312 37311 37317 37313 37313 
17-03-17 17:39:49.998 -07 000000610 INF: FPGA: 'ZFLTREAD 5 391' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:49.998 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 396\n [Z Motor]
17-03-17 17:39:49.998 -07 000000486 INF: FPGA: Recv ZFLTREAD 37313 37312 37307 37309 37308 
17-03-17 17:39:50.008 -07 000000610 INF: FPGA: 'ZFLTREAD 5 396' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.008 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 401\n [Z Motor]
17-03-17 17:39:50.008 -07 000000618 INF: FPGA: Recv ZFLTREAD 37312 37307 37304 37306 37306 
17-03-17 17:39:50.018 -07 000000610 INF: FPGA: 'ZFLTREAD 5 401' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.018 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 406\n [Z Motor]
17-03-17 17:39:50.018 -07 000000486 INF: FPGA: Recv ZFLTREAD 37300 37308 37306 37310 37304 
17-03-17 17:39:50.028 -07 000000610 INF: FPGA: 'ZFLTREAD 5 406' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.028 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 411\n [Z Motor]
17-03-17 17:39:50.028 -07 000000631 INF: FPGA: Recv ZFLTREAD 37302 37303 37306 37302 37307 
17-03-17 17:39:50.038 -07 000000610 INF: FPGA: 'ZFLTREAD 5 411' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.038 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 416\n [Z Motor]
17-03-17 17:39:50.038 -07 000000608 INF: FPGA: Recv ZFLTREAD 37306 37308 37306 37307 37307 
17-03-17 17:39:50.048 -07 000000610 INF: FPGA: 'ZFLTREAD 5 416' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.048 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 421\n [Z Motor]
17-03-17 17:39:50.048 -07 000000618 INF: FPGA: Recv ZFLTREAD 37309 37311 37312 37311 37309 
17-03-17 17:39:50.058 -07 000000610 INF: FPGA: 'ZFLTREAD 5 421' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.058 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 426\n [Z Motor]
17-03-17 17:39:50.058 -07 000000608 INF: FPGA: Recv ZFLTREAD 37308 37308 37306 37311 37316 
17-03-17 17:39:50.068 -07 000000610 INF: FPGA: 'ZFLTREAD 5 426' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.068 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 431\n [Z Motor]
17-03-17 17:39:50.068 -07 000000482 INF: FPGA: Recv ZFLTREAD 37311 37311 37307 37308 37309 
17-03-17 17:39:50.078 -07 000000610 INF: FPGA: 'ZFLTREAD 5 431' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.078 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 436\n [Z Motor]
17-03-17 17:39:50.078 -07 000000618 INF: FPGA: Recv ZFLTREAD 37310 37310 37313 37308 37308 
17-03-17 17:39:50.088 -07 000000610 INF: FPGA: 'ZFLTREAD 5 436' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.088 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 441\n [Z Motor]
17-03-17 17:39:50.088 -07 000000608 INF: FPGA: Recv ZFLTREAD 37306 37311 37307 37308 37306 
17-03-17 17:39:50.098 -07 000000610 INF: FPGA: 'ZFLTREAD 5 441' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.098 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 446\n [Z Motor]
17-03-17 17:39:50.098 -07 000000475 INF: FPGA: Recv ZFLTREAD 37307 37306 37306 37306 37307 
17-03-17 17:39:50.108 -07 000000610 INF: FPGA: 'ZFLTREAD 5 446' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.108 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 451\n [Z Motor]
17-03-17 17:39:50.108 -07 000000486 INF: FPGA: Recv ZFLTREAD 37310 37308 37304 37304 37306 
17-03-17 17:39:50.118 -07 000000610 INF: FPGA: 'ZFLTREAD 5 451' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.118 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 456\n [Z Motor]
17-03-17 17:39:50.118 -07 000000482 INF: FPGA: Recv ZFLTREAD 37308 37308 37311 37311 37307 
17-03-17 17:39:50.128 -07 000000610 INF: FPGA: 'ZFLTREAD 5 456' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.128 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 461\n [Z Motor]
17-03-17 17:39:50.128 -07 000000608 INF: FPGA: Recv ZFLTREAD 37308 37311 37313 37314 37312 
17-03-17 17:39:50.138 -07 000000610 INF: FPGA: 'ZFLTREAD 5 461' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.138 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 466\n [Z Motor]
17-03-17 17:39:50.138 -07 000000475 INF: FPGA: Recv ZFLTREAD 37310 37308 37308 37310 37309 
17-03-17 17:39:50.148 -07 000000610 INF: FPGA: 'ZFLTREAD 5 466' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.148 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 471\n [Z Motor]
17-03-17 17:39:50.148 -07 000000618 INF: FPGA: Recv ZFLTREAD 37313 37314 37313 37309 37307 
17-03-17 17:39:50.158 -07 000000610 INF: FPGA: 'ZFLTREAD 5 471' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.158 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 476\n [Z Motor]
17-03-17 17:39:50.158 -07 000000608 INF: FPGA: Recv ZFLTREAD 37305 37309 37308 37307 37313 
17-03-17 17:39:50.168 -07 000000610 INF: FPGA: 'ZFLTREAD 5 476' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.168 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 481\n [Z Motor]
17-03-17 17:39:50.168 -07 000000486 INF: FPGA: Recv ZFLTREAD 37307 37305 37301 37308 37310 
17-03-17 17:39:50.178 -07 000000610 INF: FPGA: 'ZFLTREAD 5 481' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.178 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 486\n [Z Motor]
17-03-17 17:39:50.178 -07 000000482 INF: FPGA: Recv ZFLTREAD 37306 37307 37308 37307 37303 
17-03-17 17:39:50.188 -07 000000610 INF: FPGA: 'ZFLTREAD 5 486' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.188 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 491\n [Z Motor]
17-03-17 17:39:50.188 -07 000000618 INF: FPGA: Recv ZFLTREAD 37305 37309 37312 37309 37303 
17-03-17 17:39:50.198 -07 000000610 INF: FPGA: 'ZFLTREAD 5 491' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.198 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 496\n [Z Motor]
17-03-17 17:39:50.198 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37306 37311 37309 37313 
17-03-17 17:39:50.208 -07 000000610 INF: FPGA: 'ZFLTREAD 5 496' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.208 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 501\n [Z Motor]
17-03-17 17:39:50.208 -07 000000475 INF: FPGA: Recv ZFLTREAD 37311 37311 37305 37309 37308 
17-03-17 17:39:50.218 -07 000000610 INF: FPGA: 'ZFLTREAD 5 501' command took 2 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.218 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 506\n [Z Motor]
17-03-17 17:39:50.218 -07 000000482 INF: FPGA: Recv ZFLTREAD 37315 37311 37313 37309 37307 
17-03-17 17:39:50.228 -07 000000610 INF: FPGA: 'ZFLTREAD 5 506' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.228 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 511\n [Z Motor]
17-03-17 17:39:50.228 -07 000000475 INF: FPGA: Recv ZFLTREAD 37307 37308 37312 37311 37306 
17-03-17 17:39:50.238 -07 000000610 INF: FPGA: 'ZFLTREAD 5 511' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.238 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 516\n [Z Motor]
17-03-17 17:39:50.238 -07 000000482 INF: FPGA: Recv ZFLTREAD 37306 37306 37303 37306 37307 
17-03-17 17:39:50.248 -07 000000610 INF: FPGA: 'ZFLTREAD 5 516' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.248 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 521\n [Z Motor]
17-03-17 17:39:50.248 -07 000000618 INF: FPGA: Recv ZFLTREAD 37311 37307 37303 37303 37304 
17-03-17 17:39:50.258 -07 000000610 INF: FPGA: 'ZFLTREAD 5 521' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.258 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 526\n [Z Motor]
17-03-17 17:39:50.258 -07 000000486 INF: FPGA: Recv ZFLTREAD 37303 37308 37309 37311 37307 
17-03-17 17:39:50.268 -07 000000610 INF: FPGA: 'ZFLTREAD 5 526' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.268 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 531\n [Z Motor]
17-03-17 17:39:50.268 -07 000000482 INF: FPGA: Recv ZFLTREAD 37308 37307 37309 37308 37314 
17-03-17 17:39:50.278 -07 000000610 INF: FPGA: 'ZFLTREAD 5 531' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.278 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 536\n [Z Motor]
17-03-17 17:39:50.278 -07 000000618 INF: FPGA: Recv ZFLTREAD 37314 37308 37310 37313 37310 
17-03-17 17:39:50.288 -07 000000610 INF: FPGA: 'ZFLTREAD 5 536' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.288 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 541\n [Z Motor]
17-03-17 17:39:50.288 -07 000000486 INF: FPGA: Recv ZFLTREAD 37315 37313 37315 37316 37307 
17-03-17 17:39:50.298 -07 000000610 INF: FPGA: 'ZFLTREAD 5 541' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.298 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 546\n [Z Motor]
17-03-17 17:39:50.298 -07 000000608 INF: FPGA: Recv ZFLTREAD 37310 37312 37310 37311 37310 
17-03-17 17:39:50.308 -07 000000610 INF: FPGA: 'ZFLTREAD 5 546' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.308 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 551\n [Z Motor]
17-03-17 17:39:50.308 -07 000000482 INF: FPGA: Recv ZFLTREAD 37307 37309 37307 37309 37311 
17-03-17 17:39:50.318 -07 000000610 INF: FPGA: 'ZFLTREAD 5 551' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.318 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 556\n [Z Motor]
17-03-17 17:39:50.318 -07 000000475 INF: FPGA: Recv ZFLTREAD 37311 37310 37304 37304 37305 
17-03-17 17:39:50.328 -07 000000610 INF: FPGA: 'ZFLTREAD 5 556' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.328 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 561\n [Z Motor]
17-03-17 17:39:50.328 -07 000000475 INF: FPGA: Recv ZFLTREAD 37305 37305 37310 37310 37305 
17-03-17 17:39:50.338 -07 000000610 INF: FPGA: 'ZFLTREAD 5 561' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.338 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 566\n [Z Motor]
17-03-17 17:39:50.338 -07 000000475 INF: FPGA: Recv ZFLTREAD 37305 37304 37307 37310 37307 
17-03-17 17:39:50.348 -07 000000610 INF: FPGA: 'ZFLTREAD 5 566' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.348 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 571\n [Z Motor]
17-03-17 17:39:50.348 -07 000000618 INF: FPGA: Recv ZFLTREAD 37309 37309 37307 37309 37310 
17-03-17 17:39:50.358 -07 000000610 INF: FPGA: 'ZFLTREAD 5 571' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.358 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 576\n [Z Motor]
17-03-17 17:39:50.358 -07 000000475 INF: FPGA: Recv ZFLTREAD 37308 37314 37308 37309 37306 
17-03-17 17:39:50.368 -07 000000610 INF: FPGA: 'ZFLTREAD 5 576' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.368 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 581\n [Z Motor]
17-03-17 17:39:50.368 -07 000000482 INF: FPGA: Recv ZFLTREAD 37309 37309 37311 37306 37309 
17-03-17 17:39:50.378 -07 000000610 INF: FPGA: 'ZFLTREAD 5 581' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.378 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 586\n [Z Motor]
17-03-17 17:39:50.378 -07 000000486 INF: FPGA: Recv ZFLTREAD 37310 37309 37303 37311 37309 
17-03-17 17:39:50.388 -07 000000610 INF: FPGA: 'ZFLTREAD 5 586' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.388 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 591\n [Z Motor]
17-03-17 17:39:50.388 -07 000000475 INF: FPGA: Recv ZFLTREAD 37309 37309 37307 37309 37308 
17-03-17 17:39:50.398 -07 000000610 INF: FPGA: 'ZFLTREAD 5 591' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.398 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 596\n [Z Motor]
17-03-17 17:39:50.398 -07 000000475 INF: FPGA: Recv ZFLTREAD 37302 37312 37310 37310 37305 
17-03-17 17:39:50.408 -07 000000610 INF: FPGA: 'ZFLTREAD 5 596' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.408 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 601\n [Z Motor]
17-03-17 17:39:50.408 -07 000000618 INF: FPGA: Recv ZFLTREAD 37307 37309 37306 37307 37312 
17-03-17 17:39:50.418 -07 000000610 INF: FPGA: 'ZFLTREAD 5 601' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.418 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 606\n [Z Motor]
17-03-17 17:39:50.418 -07 000000608 INF: FPGA: Recv ZFLTREAD 37314 37309 37309 37309 37309 
17-03-17 17:39:50.428 -07 000000610 INF: FPGA: 'ZFLTREAD 5 606' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.428 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 611\n [Z Motor]
17-03-17 17:39:50.428 -07 000000608 INF: FPGA: Recv ZFLTREAD 37310 37310 37312 37313 37308 
17-03-17 17:39:50.438 -07 000000610 INF: FPGA: 'ZFLTREAD 5 611' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.438 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 616\n [Z Motor]
17-03-17 17:39:50.438 -07 000000618 INF: FPGA: Recv ZFLTREAD 37309 37311 37311 37311 37315 
17-03-17 17:39:50.448 -07 000000610 INF: FPGA: 'ZFLTREAD 5 616' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.448 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 621\n [Z Motor]
17-03-17 17:39:50.448 -07 000000608 INF: FPGA: Recv ZFLTREAD 37307 37314 37308 37308 37309 
17-03-17 17:39:50.458 -07 000000610 INF: FPGA: 'ZFLTREAD 5 621' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.458 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 626\n [Z Motor]
17-03-17 17:39:50.458 -07 000000482 INF: FPGA: Recv ZFLTREAD 37312 37310 37312 37309 37310 
17-03-17 17:39:50.468 -07 000000610 INF: FPGA: 'ZFLTREAD 5 626' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.468 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 631\n [Z Motor]
17-03-17 17:39:50.468 -07 000000486 INF: FPGA: Recv ZFLTREAD 37306 37307 37311 37310 37306 
17-03-17 17:39:50.478 -07 000000610 INF: FPGA: 'ZFLTREAD 5 631' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.478 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 636\n [Z Motor]
17-03-17 17:39:50.478 -07 000000618 INF: FPGA: Recv ZFLTREAD 37309 37309 37306 37309 37308 
17-03-17 17:39:50.488 -07 000000610 INF: FPGA: 'ZFLTREAD 5 636' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.488 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 641\n [Z Motor]
17-03-17 17:39:50.488 -07 000000486 INF: FPGA: Recv ZFLTREAD 37310 37310 37311 37307 37307 
17-03-17 17:39:50.498 -07 000000610 INF: FPGA: 'ZFLTREAD 5 641' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.498 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 646\n [Z Motor]
17-03-17 17:39:50.498 -07 000000486 INF: FPGA: Recv ZFLTREAD 37307 37309 37312 37311 37309 
17-03-17 17:39:50.508 -07 000000610 INF: FPGA: 'ZFLTREAD 5 646' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.508 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 651\n [Z Motor]
17-03-17 17:39:50.508 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37310 37308 37305 37311 
17-03-17 17:39:50.518 -07 000000610 INF: FPGA: 'ZFLTREAD 5 651' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.518 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 656\n [Z Motor]
17-03-17 17:39:50.518 -07 000000482 INF: FPGA: Recv ZFLTREAD 37315 37311 37310 37310 37308 
17-03-17 17:39:50.528 -07 000000610 INF: FPGA: 'ZFLTREAD 5 656' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.528 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 661\n [Z Motor]
17-03-17 17:39:50.528 -07 000000475 INF: FPGA: Recv ZFLTREAD 37307 37311 37313 37310 37309 
17-03-17 17:39:50.538 -07 000000610 INF: FPGA: 'ZFLTREAD 5 661' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.538 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 666\n [Z Motor]
17-03-17 17:39:50.538 -07 000000482 INF: FPGA: Recv ZFLTREAD 37309 37307 37309 37305 37311 
17-03-17 17:39:50.548 -07 000000610 INF: FPGA: 'ZFLTREAD 5 666' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.548 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 671\n [Z Motor]
17-03-17 17:39:50.548 -07 000000608 INF: FPGA: Recv ZFLTREAD 37309 37311 37306 37306 37306 
17-03-17 17:39:50.558 -07 000000610 INF: FPGA: 'ZFLTREAD 5 671' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.558 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 676\n [Z Motor]
17-03-17 17:39:50.558 -07 000000482 INF: FPGA: Recv ZFLTREAD 37310 37309 37310 37309 37308 
17-03-17 17:39:50.568 -07 000000610 INF: FPGA: 'ZFLTREAD 5 676' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.568 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 681\n [Z Motor]
17-03-17 17:39:50.568 -07 000000442 INF: FPGA: Recv ZFLTREAD 37306 37308 37306 37317 37308 
17-03-17 17:39:50.578 -07 000000610 INF: FPGA: 'ZFLTREAD 5 681' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.578 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 686\n [Z Motor]
17-03-17 17:39:50.578 -07 000000608 INF: FPGA: Recv ZFLTREAD 37308 37307 37305 37307 37310 
17-03-17 17:39:50.588 -07 000000610 INF: FPGA: 'ZFLTREAD 5 686' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.588 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 691\n [Z Motor]
17-03-17 17:39:50.588 -07 000000442 INF: FPGA: Recv ZFLTREAD 37309 37313 37307 37307 37305 
17-03-17 17:39:50.598 -07 000000610 INF: FPGA: 'ZFLTREAD 5 691' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.598 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 696\n [Z Motor]
17-03-17 17:39:50.598 -07 000000482 INF: FPGA: Recv ZFLTREAD 37306 37308 37313 37311 37310 
17-03-17 17:39:50.608 -07 000000610 INF: FPGA: 'ZFLTREAD 5 696' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.608 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 701\n [Z Motor]
17-03-17 17:39:50.608 -07 000000486 INF: FPGA: Recv ZFLTREAD 37311 37306 37306 37306 37311 
17-03-17 17:39:50.618 -07 000000610 INF: FPGA: 'ZFLTREAD 5 701' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.618 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 706\n [Z Motor]
17-03-17 17:39:50.618 -07 000000486 INF: FPGA: Recv ZFLTREAD 37315 37312 37306 37307 37306 
17-03-17 17:39:50.628 -07 000000610 INF: FPGA: 'ZFLTREAD 5 706' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.628 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 711\n [Z Motor]
17-03-17 17:39:50.628 -07 000000618 INF: FPGA: Recv ZFLTREAD 37307 37309 37312 37311 37309 
17-03-17 17:39:50.638 -07 000000610 INF: FPGA: 'ZFLTREAD 5 711' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.638 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 716\n [Z Motor]
17-03-17 17:39:50.638 -07 000000608 INF: FPGA: Recv ZFLTREAD 37303 37305 37307 37312 37309 
17-03-17 17:39:50.648 -07 000000610 INF: FPGA: 'ZFLTREAD 5 716' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.648 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 721\n [Z Motor]
17-03-17 17:39:50.648 -07 000000486 INF: FPGA: Recv ZFLTREAD 37313 37308 37307 37306 37305 
17-03-17 17:39:50.658 -07 000000610 INF: FPGA: 'ZFLTREAD 5 721' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.658 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 726\n [Z Motor]
17-03-17 17:39:50.658 -07 000000442 INF: FPGA: Recv ZFLTREAD 37308 37310 37309 37309 37308 
17-03-17 17:39:50.668 -07 000000610 INF: FPGA: 'ZFLTREAD 5 726' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.668 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 731\n [Z Motor]
17-03-17 17:39:50.668 -07 000000618 INF: FPGA: Recv ZFLTREAD 37306 37309 37308 37310 37313 
17-03-17 17:39:50.678 -07 000000610 INF: FPGA: 'ZFLTREAD 5 731' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.678 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 736\n [Z Motor]
17-03-17 17:39:50.678 -07 000000486 INF: FPGA: Recv ZFLTREAD 37310 37305 37304 37307 37311 
17-03-17 17:39:50.688 -07 000000610 INF: FPGA: 'ZFLTREAD 5 736' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.688 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 741\n [Z Motor]
17-03-17 17:39:50.688 -07 000000618 INF: FPGA: Recv ZFLTREAD 37313 37310 37309 37306 37302 
17-03-17 17:39:50.698 -07 000000610 INF: FPGA: 'ZFLTREAD 5 741' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.698 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 746\n [Z Motor]
17-03-17 17:39:50.698 -07 000000442 INF: FPGA: Recv ZFLTREAD 37307 37309 37311 37309 37307 
17-03-17 17:39:50.708 -07 000000610 INF: FPGA: 'ZFLTREAD 5 746' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.708 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 751\n [Z Motor]
17-03-17 17:39:50.708 -07 000000618 INF: FPGA: Recv ZFLTREAD 37309 37309 37302 37308 37314 
17-03-17 17:39:50.718 -07 000000610 INF: FPGA: 'ZFLTREAD 5 751' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.718 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 756\n [Z Motor]
17-03-17 17:39:50.718 -07 000000442 INF: FPGA: Recv ZFLTREAD 37311 37313 37305 37307 37305 
17-03-17 17:39:50.728 -07 000000610 INF: FPGA: 'ZFLTREAD 5 756' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.728 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 761\n [Z Motor]
17-03-17 17:39:50.728 -07 000000486 INF: FPGA: Recv ZFLTREAD 37310 37310 37315 37311 37310 
17-03-17 17:39:50.738 -07 000000610 INF: FPGA: 'ZFLTREAD 5 761' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.738 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 766\n [Z Motor]
17-03-17 17:39:50.738 -07 000000618 INF: FPGA: Recv ZFLTREAD 37303 37305 37311 37314 37308 
17-03-17 17:39:50.748 -07 000000610 INF: FPGA: 'ZFLTREAD 5 766' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.748 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 771\n [Z Motor]
17-03-17 17:39:50.748 -07 000000618 INF: FPGA: Recv ZFLTREAD 37311 37307 37307 37301 37306 
17-03-17 17:39:50.758 -07 000000610 INF: FPGA: 'ZFLTREAD 5 771' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.758 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 776\n [Z Motor]
17-03-17 17:39:50.758 -07 000000486 INF: FPGA: Recv ZFLTREAD 37311 37312 37309 37308 37305 
17-03-17 17:39:50.768 -07 000000610 INF: FPGA: 'ZFLTREAD 5 776' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.768 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 781\n [Z Motor]
17-03-17 17:39:50.768 -07 000000486 INF: FPGA: Recv ZFLTREAD 37308 37308 37310 37312 37310 
17-03-17 17:39:50.778 -07 000000610 INF: FPGA: 'ZFLTREAD 5 781' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.778 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 786\n [Z Motor]
17-03-17 17:39:50.778 -07 000000442 INF: FPGA: Recv ZFLTREAD 37312 37305 37304 37304 37313 
17-03-17 17:39:50.788 -07 000000610 INF: FPGA: 'ZFLTREAD 5 786' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.788 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 791\n [Z Motor]
17-03-17 17:39:50.788 -07 000000618 INF: FPGA: Recv ZFLTREAD 37314 37311 37305 37308 37305 
17-03-17 17:39:50.798 -07 000000610 INF: FPGA: 'ZFLTREAD 5 791' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.798 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 796\n [Z Motor]
17-03-17 17:39:50.798 -07 000000486 INF: FPGA: Recv ZFLTREAD 37304 37308 37314 37311 37308 
17-03-17 17:39:50.808 -07 000000610 INF: FPGA: 'ZFLTREAD 5 796' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.808 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 801\n [Z Motor]
17-03-17 17:39:50.808 -07 000000482 INF: FPGA: Recv ZFLTREAD 37304 37309 37307 37304 37310 
17-03-17 17:39:50.818 -07 000000610 INF: FPGA: 'ZFLTREAD 5 801' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.818 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 806\n [Z Motor]
17-03-17 17:39:50.818 -07 000000442 INF: FPGA: Recv ZFLTREAD 37311 37307 37306 37301 37303 
17-03-17 17:39:50.828 -07 000000610 INF: FPGA: 'ZFLTREAD 5 806' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.828 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 811\n [Z Motor]
17-03-17 17:39:50.828 -07 000000482 INF: FPGA: Recv ZFLTREAD 37306 37307 37308 37307 37308 
17-03-17 17:39:50.838 -07 000000610 INF: FPGA: 'ZFLTREAD 5 811' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.838 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 816\n [Z Motor]
17-03-17 17:39:50.838 -07 000000486 INF: FPGA: Recv ZFLTREAD 37304 37303 37305 37308 37309 
17-03-17 17:39:50.848 -07 000000610 INF: FPGA: 'ZFLTREAD 5 816' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.848 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 821\n [Z Motor]
17-03-17 17:39:50.848 -07 000000608 INF: FPGA: Recv ZFLTREAD 37310 37306 37306 37307 37308 
17-03-17 17:39:50.858 -07 000000610 INF: FPGA: 'ZFLTREAD 5 821' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.858 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 826\n [Z Motor]
17-03-17 17:39:50.858 -07 000000482 INF: FPGA: Recv ZFLTREAD 37308 37315 37315 37310 37310 
17-03-17 17:39:50.868 -07 000000610 INF: FPGA: 'ZFLTREAD 5 826' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.868 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 831\n [Z Motor]
17-03-17 17:39:50.868 -07 000000482 INF: FPGA: Recv ZFLTREAD 37311 37313 37311 37311 37312 
17-03-17 17:39:50.878 -07 000000610 INF: FPGA: 'ZFLTREAD 5 831' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.878 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 836\n [Z Motor]
17-03-17 17:39:50.878 -07 000000486 INF: FPGA: Recv ZFLTREAD 37313 37311 37307 37308 37311 
17-03-17 17:39:50.888 -07 000000610 INF: FPGA: 'ZFLTREAD 5 836' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.888 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 841\n [Z Motor]
17-03-17 17:39:50.888 -07 000000618 INF: FPGA: Recv ZFLTREAD 37311 37311 37312 37310 37306 
17-03-17 17:39:50.898 -07 000000610 INF: FPGA: 'ZFLTREAD 5 841' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.898 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 846\n [Z Motor]
17-03-17 17:39:50.898 -07 000000482 INF: FPGA: Recv ZFLTREAD 37304 37305 37310 37309 37307 
17-03-17 17:39:50.908 -07 000000610 INF: FPGA: 'ZFLTREAD 5 846' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.908 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 851\n [Z Motor]
17-03-17 17:39:50.908 -07 000000442 INF: FPGA: Recv ZFLTREAD 37304 37306 37307 37305 37307 
17-03-17 17:39:50.918 -07 000000610 INF: FPGA: 'ZFLTREAD 5 851' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.918 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 856\n [Z Motor]
17-03-17 17:39:50.918 -07 000000486 INF: FPGA: Recv ZFLTREAD 37312 37309 37308 37305 37310 
17-03-17 17:39:50.928 -07 000000610 INF: FPGA: 'ZFLTREAD 5 856' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.928 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 861\n [Z Motor]
17-03-17 17:39:50.928 -07 000000618 INF: FPGA: Recv ZFLTREAD 37308 37312 37311 37312 37305 
17-03-17 17:39:50.938 -07 000000610 INF: FPGA: 'ZFLTREAD 5 861' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.938 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 866\n [Z Motor]
17-03-17 17:39:50.938 -07 000000618 INF: FPGA: Recv ZFLTREAD 37308 37307 37309 37312 37313 
17-03-17 17:39:50.948 -07 000000610 INF: FPGA: 'ZFLTREAD 5 866' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.948 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 871\n [Z Motor]
17-03-17 17:39:50.948 -07 000000608 INF: FPGA: Recv ZFLTREAD 37308 37312 37305 37309 37306 
17-03-17 17:39:50.958 -07 000000610 INF: FPGA: 'ZFLTREAD 5 871' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.958 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 876\n [Z Motor]
17-03-17 17:39:50.958 -07 000000442 INF: FPGA: Recv ZFLTREAD 37309 37310 37310 37304 37306 
17-03-17 17:39:50.968 -07 000000610 INF: FPGA: 'ZFLTREAD 5 876' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.968 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 881\n [Z Motor]
17-03-17 17:39:50.968 -07 000000482 INF: FPGA: Recv ZFLTREAD 37304 37304 37309 37308 37305 
17-03-17 17:39:50.978 -07 000000610 INF: FPGA: 'ZFLTREAD 5 881' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.978 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 886\n [Z Motor]
17-03-17 17:39:50.978 -07 000000618 INF: FPGA: Recv ZFLTREAD 37308 37305 37302 37305 37304 
17-03-17 17:39:50.988 -07 000000610 INF: FPGA: 'ZFLTREAD 5 886' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.988 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 891\n [Z Motor]
17-03-17 17:39:50.988 -07 000000442 INF: FPGA: Recv ZFLTREAD 37305 37309 37308 37308 37307 
17-03-17 17:39:50.998 -07 000000610 INF: FPGA: 'ZFLTREAD 5 891' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:50.998 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 896\n [Z Motor]
17-03-17 17:39:50.998 -07 000000486 INF: FPGA: Recv ZFLTREAD 37307 37311 37309 37310 37310 
17-03-17 17:39:51.008 -07 000000610 INF: FPGA: 'ZFLTREAD 5 896' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.008 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 901\n [Z Motor]
17-03-17 17:39:51.008 -07 000000618 INF: FPGA: Recv ZFLTREAD 37308 37312 37311 37308 37313 
17-03-17 17:39:51.018 -07 000000610 INF: FPGA: 'ZFLTREAD 5 901' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.018 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 906\n [Z Motor]
17-03-17 17:39:51.018 -07 000000608 INF: FPGA: Recv ZFLTREAD 37312 37312 37312 37312 37308 
17-03-17 17:39:51.028 -07 000000610 INF: FPGA: 'ZFLTREAD 5 906' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.028 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 911\n [Z Motor]
17-03-17 17:39:51.028 -07 000000486 INF: FPGA: Recv ZFLTREAD 37310 37308 37312 37311 37309 
17-03-17 17:39:51.038 -07 000000610 INF: FPGA: 'ZFLTREAD 5 911' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.038 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 916\n [Z Motor]
17-03-17 17:39:51.038 -07 000000442 INF: FPGA: Recv ZFLTREAD 37309 37306 37309 37312 37313 
17-03-17 17:39:51.048 -07 000000610 INF: FPGA: 'ZFLTREAD 5 916' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.048 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 921\n [Z Motor]
17-03-17 17:39:51.048 -07 000000482 INF: FPGA: Recv ZFLTREAD 37310 37312 37312 37309 37310 
17-03-17 17:39:51.058 -07 000000610 INF: FPGA: 'ZFLTREAD 5 921' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.058 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 926\n [Z Motor]
17-03-17 17:39:51.058 -07 000000486 INF: FPGA: Recv ZFLTREAD 37311 37310 37312 37309 37312 
17-03-17 17:39:51.068 -07 000000610 INF: FPGA: 'ZFLTREAD 5 926' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.068 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 931\n [Z Motor]
17-03-17 17:39:51.068 -07 000000442 INF: FPGA: Recv ZFLTREAD 37308 37308 37310 37310 37309 
17-03-17 17:39:51.078 -07 000000610 INF: FPGA: 'ZFLTREAD 5 931' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.078 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 936\n [Z Motor]
17-03-17 17:39:51.078 -07 000000482 INF: FPGA: Recv ZFLTREAD 37311 37311 37305 37310 37307 
17-03-17 17:39:51.088 -07 000000610 INF: FPGA: 'ZFLTREAD 5 936' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.088 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 941\n [Z Motor]
17-03-17 17:39:51.088 -07 000000618 INF: FPGA: Recv ZFLTREAD 37310 37309 37311 37305 37308 
17-03-17 17:39:51.098 -07 000000610 INF: FPGA: 'ZFLTREAD 5 941' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.098 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 946\n [Z Motor]
17-03-17 17:39:51.098 -07 000000618 INF: FPGA: Recv ZFLTREAD 37304 37309 37307 37309 37309 
17-03-17 17:39:51.108 -07 000000610 INF: FPGA: 'ZFLTREAD 5 946' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.108 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 951\n [Z Motor]
17-03-17 17:39:51.108 -07 000000608 INF: FPGA: Recv ZFLTREAD 37308 37300 37308 37306 37303 
17-03-17 17:39:51.118 -07 000000610 INF: FPGA: 'ZFLTREAD 5 951' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.118 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 956\n [Z Motor]
17-03-17 17:39:51.118 -07 000000442 INF: FPGA: Recv ZFLTREAD 37307 37307 37308 37305 37301 
17-03-17 17:39:51.128 -07 000000610 INF: FPGA: 'ZFLTREAD 5 956' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.128 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 961\n [Z Motor]
17-03-17 17:39:51.128 -07 000000482 INF: FPGA: Recv ZFLTREAD 37307 37309 37304 37306 37307 
17-03-17 17:39:51.138 -07 000000610 INF: FPGA: 'ZFLTREAD 5 961' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.138 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 966\n [Z Motor]
17-03-17 17:39:51.138 -07 000000486 INF: FPGA: Recv ZFLTREAD 37306 37305 37306 37311 37308 
17-03-17 17:39:51.148 -07 000000610 INF: FPGA: 'ZFLTREAD 5 966' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.148 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 971\n [Z Motor]
17-03-17 17:39:51.148 -07 000000442 INF: FPGA: Recv ZFLTREAD 37306 37309 37311 37310 37306 
17-03-17 17:39:51.158 -07 000000610 INF: FPGA: 'ZFLTREAD 5 971' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.158 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 976\n [Z Motor]
17-03-17 17:39:51.158 -07 000000618 INF: FPGA: Recv ZFLTREAD 37309 37309 37312 37309 37310 
17-03-17 17:39:51.168 -07 000000610 INF: FPGA: 'ZFLTREAD 5 976' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.168 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 981\n [Z Motor]
17-03-17 17:39:51.168 -07 000000486 INF: FPGA: Recv ZFLTREAD 37309 37311 37310 37311 37310 
17-03-17 17:39:51.178 -07 000000610 INF: FPGA: 'ZFLTREAD 5 981' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.178 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 986\n [Z Motor]
17-03-17 17:39:51.178 -07 000000618 INF: FPGA: Recv ZFLTREAD 37310 37308 37309 37308 37312 
17-03-17 17:39:51.188 -07 000000610 INF: FPGA: 'ZFLTREAD 5 986' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.188 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 991\n [Z Motor]
17-03-17 17:39:51.188 -07 000000618 INF: FPGA: Recv ZFLTREAD 37312 37309 37310 37310 37309 
17-03-17 17:39:51.198 -07 000000610 INF: FPGA: 'ZFLTREAD 5 991' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.198 -07 000000610 INF: FPGA: Xmit ZFLTREAD 5 996\n [Z Motor]
17-03-17 17:39:51.198 -07 000000486 INF: FPGA: Recv ZFLTREAD 37310 37309 37309 37310 37305 
17-03-17 17:39:51.208 -07 000000610 INF: FPGA: 'ZFLTREAD 5 996' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 17:39:51.208 -07 000000610 INF: Z Motor: Read 1000 samples from flight recorder after 1992 ms
17-03-17 17:39:51.208 -07 000000610 INF: Z Motor: Z Settling Time Test: Commanded Z = -180.0 um, Read 1000 ADC samples: Avg = 37232 (-179.5 cal um), Error = 0.5 cal um, Median = 37309 (-180.0 cal um), StdDev = 505 (-56.4 cal um), Range = 4690 (-29.5 cal um), Min = 32636 (-150.0 cal um), Max = 37326 (-180.1 cal um), Pos Noise = 94 (-59.1 cal um), Neg Noise = 4596 (-30.2 cal um)
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: Z Settling Test: Move -30.000 um from -150.000 to -180.000 um, start hold = 1000 ms, end hold = 1000 ms, min rise = 0, max rise = 100 ms, max settle = 150 ms, tol = 0.150 um, settling window = 200 ms, final window = 100 ms
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: CheckStepSettlingTimeSingleMove: Step 30 um Settling Time
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: Entire sample set: Min = 149.984 +um, Max = 180.114 +um
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: OutLow = 150.000 +um, OutHigh = 180.000 +um, LowThreshold = 153.000 +um, HighThreshold = 177.000 +um
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 0 ms to 149 ms, Min = 149.984 +um (target - 30.016 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 1 ms to 150 ms, Min = 149.984 +um (target - 30.016 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 2 ms to 151 ms, Min = 150.055 +um (target - 29.945 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 3 ms to 152 ms, Min = 150.299 +um (target - 29.701 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 4 ms to 153 ms, Min = 150.761 +um (target - 29.239 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 5 ms to 154 ms, Min = 151.513 +um (target - 28.487 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 6 ms to 155 ms, Min = 152.399 +um (target - 27.601 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 7 ms to 156 ms, Min = 153.601 +um (target - 26.399 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 8 ms to 157 ms, Min = 154.976 +um (target - 25.024 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 9 ms to 158 ms, Min = 156.215 +um (target - 23.785 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 10 ms to 159 ms, Min = 157.751 +um (target - 22.249 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 11 ms to 160 ms, Min = 159.421 +um (target - 20.579 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 12 ms to 161 ms, Min = 161.059 +um (target - 18.941 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 13 ms to 162 ms, Min = 162.486 +um (target - 17.515 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 14 ms to 163 ms, Min = 164.098 +um (target - 15.902 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 15 ms to 164 ms, Min = 165.640 +um (target - 14.360 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 16 ms to 165 ms, Min = 166.893 +um (target - 13.108 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 17 ms to 166 ms, Min = 168.222 +um (target - 11.778 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 18 ms to 167 ms, Min = 169.526 +um (target - 10.474 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 19 ms to 168 ms, Min = 170.734 +um (target - 9.266 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 20 ms to 169 ms, Min = 171.730 +um (target - 8.270 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 21 ms to 170 ms, Min = 172.719 +um (target - 7.281 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 22 ms to 171 ms, Min = 173.612 +um (target - 6.388 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 23 ms to 172 ms, Min = 174.332 +um (target - 5.668 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.208 -07 000000610 INF: Z Settling Test: For settling window from 24 ms to 173 ms, Min = 175.058 +um (target - 4.942 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 25 ms to 174 ms, Min = 175.649 +um (target - 4.351 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 26 ms to 175 ms, Min = 176.227 +um (target - 3.773 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 27 ms to 176 ms, Min = 176.715 +um (target - 3.285 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 28 ms to 177 ms, Min = 177.191 +um (target - 2.810 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 29 ms to 178 ms, Min = 177.589 +um (target - 2.411 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 30 ms to 179 ms, Min = 177.955 +um (target - 2.045 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 31 ms to 180 ms, Min = 178.199 +um (target - 1.801 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 32 ms to 181 ms, Min = 178.450 +um (target - 1.550 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 33 ms to 182 ms, Min = 178.662 +um (target - 1.338 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 34 ms to 183 ms, Min = 178.854 +um (target - 1.146 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 35 ms to 184 ms, Min = 179.079 +um (target - 0.921 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 36 ms to 185 ms, Min = 179.214 +um (target - 0.786 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 37 ms to 186 ms, Min = 179.362 +um (target - 0.638 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 38 ms to 187 ms, Min = 179.465 +um (target - 0.535 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 39 ms to 188 ms, Min = 179.529 +um (target - 0.471 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 40 ms to 189 ms, Min = 179.593 +um (target - 0.407 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 41 ms to 190 ms, Min = 179.657 +um (target - 0.343 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 42 ms to 191 ms, Min = 179.754 +um (target - 0.246 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 43 ms to 192 ms, Min = 179.812 +um (target - 0.188 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 44 ms to 193 ms, Min = 179.844 +um (target - 0.156 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: For settling window from 45 ms to 194 ms, Min = 179.882 +um (target - 0.118 um), Max = 180.114 +um (target + 0.113 um).
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Settle To ANYWHERE Test: Step settled to 0.270 um P-P in 44 ms (must be 0.300 um P-P by 150 ms for at least 150 ms). Window started from 0 ms to 44 ms. Overshoot = 0.113 um
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Settle To TARGET Test: Step settled to target 180.000 +um +/- 0.150 um in 45 ms (must be by 150 ms for at least 150 ms). Window started from 0 ms to 45 ms. Overshoot = 0.113 um
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Step 30 um Settling Time : Pass - Settled to 180.000 +um +/- 0.150 um in 45 ms (must be <= 150 ms)

17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: CheckStepRiseTimeSingleMove: Step 30 um Rise Time
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Entire sample set: Min = 149.984 +um, Max = 180.114 +um
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: OutLow = 150.000 +um, OutHigh = 180.000 +um, LowThreshold = 153.000 +um, HighThreshold = 177.000 +um
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Rise and hold region after 0 ms: LastLowLevel = 152.399 um @6 ms, RisingEdge = 177.191 um @28 ms, End = 179.979 um @999 ms, TimeAfterRisingEdge = 971 ms, RiseTime = 22 ms
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Step 30 um Rise Time: Rise time = 22 ms, must be 0 to 100 ms
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Step 30 um Rise Time : Pass - Rise time = 22 ms, must be 0 to 100 ms

17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: CheckStepOvershoot: Step 30 um Overshoot
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Step 30 um Overshoot: Overshoot = 0.113 um, value must be <= 10.000
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Step 30 um Overshoot : Pass - Overshoot = 0.113 um, value must be <= 10.000

17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: CheckFinalPositionUm: Final Position at -180 um
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Final Position at -180 um: Position = -180.004 um
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Final Position at -180 um : Pass - Position = -180.004 um

17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: CheckFinalPositionErrorUm: Final Error at -180 um
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Final Error at -180 um: Error = -0.004, abs val must be <= 0.100 um)
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Final Error at -180 um : Pass - Error = -0.004, abs val must be <= 0.100 um)

17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: CheckFinalPeakNoiseUm: Final Peak Noise at -180 um
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Final Peak Noise at -180 um: Final peak noise = 0.057, abs val must be <= 10.000 um)
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Final Peak Noise at -180 um : Pass - Final peak noise = 0.057, abs val must be <= 10.000 um)

17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: CheckFinalStdDeviationUm: Final std deviation at -180 um
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Final std deviation at -180 um: Std deviation = 0.01607018, must be <= 0.100 um)
17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Final std deviation at -180 um : Pass - Std deviation = 0.01607018, must be <= 0.100 um)

17-03-17 17:39:51.218 -07 000000610 INF: Z Settling Test: Step 30 um Test: Move time = 22 ms, Move & settle time = 45 ms, overshoot = 0.113 um, final position = -180.004 um, error = -0.004 um, std dev = 0.016 um, max noise = 0.057 um
17-03-17 17:39:51.228 -07 000000610 INF: Predictive Diagnostic Log Z Settling Test Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles: 158, CycleNumber: 3, ZSettlingTimeMs 45, ZOvershootUm: 0.113, ZSettlingAccuracyUm: -0.004
17-03-17 17:39:51.228 -07 000000610 WRN: Offset file 'D:\Illumina\MiSeqFGxTemp\170317_M03814_0172_000000000-B2K79\Data\Intensities\Offsets\offsets.txt' does not exist.
17-03-17 17:39:51.228 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.